View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14873_low_5 (Length: 244)
Name: NF14873_low_5
Description: NF14873
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14873_low_5 |
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Alignment Details
Target: chr5 (Bit Score: 158; Significance: 3e-84; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 23 - 184
Target Start/End: Complemental strand, 3332804 - 3332643
Alignment:
| Q |
23 |
tgcaaaggaattaagtatatttgaagaaagaatactcatctcagcagcacatatcgattatagagattaattatggatcaaataacatcacatggacatt |
122 |
Q |
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| T |
3332804 |
tgcaaaggaattaagtatatttgaagaaagaatactcatctcagcagcacatatcgattatagagattaattatggatcaaataacatcacatggacatt |
3332705 |
T |
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| Q |
123 |
cacttcctccacctttccacacagcaagagatcttcatcttcaccatcaacaccagcagcag |
184 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
3332704 |
cacttcctccacctttccacacagcaagagatcttcatcttcaccatcaacaccaacagcag |
3332643 |
T |
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