View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14874_low_10 (Length: 201)
Name: NF14874_low_10
Description: NF14874
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14874_low_10 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 27043865 - 27043665
Alignment:
| Q |
1 |
cgccgtcttcatcacccgaatattatcgatctcttcgaagtcctggcttccaagaccaaaatctacttcgtcgtggagttcgctgaagctggtgaactct |
100 |
Q |
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| T |
27043865 |
cgccgtcttcatcacccgaatatcatcgatctcttcgaagtcctcgcttcgaagagcaaaatctacttcgtcgtggagttcgctgaagctggtgaactct |
27043766 |
T |
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| Q |
101 |
tcgaagaagtagccaagaaagaaaagcttacagaagatcatgcaagaagatacttccggcaacttatctccgccgtgaaacactgtcactctcgcggtgt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27043765 |
tcgaagaagtagccaagaaagaaaagcttacagaagatcatgcaagaagatacttccggcaacttatctccgccgtgaaacactgtcactctcgcggtgt |
27043666 |
T |
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| Q |
201 |
t |
201 |
Q |
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| T |
27043665 |
t |
27043665 |
T |
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