View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14875_high_12 (Length: 330)

Name: NF14875_high_12
Description: NF14875
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14875_high_12
NF14875_high_12
[»] chr6 (70 HSPs)
chr6 (1-313)||(27604749-27605061)
chr6 (26-313)||(27724889-27725176)
chr6 (26-313)||(27611046-27611333)
chr6 (26-313)||(27718423-27718710)
chr6 (26-307)||(27698544-27698825)
chr6 (1-313)||(28780976-28781282)
chr6 (26-306)||(26802298-26802578)
chr6 (26-313)||(28786134-28786421)
chr6 (26-313)||(28792255-28792542)
chr6 (26-277)||(27229088-27229339)
chr6 (26-313)||(27593064-27593351)
chr6 (26-306)||(26655845-26656125)
chr6 (26-306)||(26761816-26762096)
chr6 (26-313)||(27678802-27679089)
chr6 (51-307)||(27531247-27531503)
chr6 (1-313)||(26646310-26646622)
chr6 (1-313)||(26752278-26752590)
chr6 (26-300)||(31284144-31284418)
chr6 (26-313)||(27677658-27677945)
chr6 (24-308)||(26622830-26623114)
chr6 (24-308)||(26728808-26729092)
chr6 (26-313)||(27338109-27338396)
chr6 (26-313)||(27398849-27399136)
chr6 (32-294)||(26884025-26884287)
chr6 (59-313)||(27706446-27706700)
chr6 (64-313)||(25579613-25579862)
chr6 (64-313)||(25481636-25481885)
chr6 (64-313)||(26142759-26143008)
chr6 (64-308)||(26055820-26056064)
chr6 (64-308)||(26075790-26076034)
chr6 (64-313)||(26048739-26048988)
chr6 (64-313)||(26069908-26070157)
chr6 (32-299)||(26823702-26823969)
chr6 (35-298)||(28234429-28234692)
chr6 (32-298)||(26861478-26861744)
chr6 (64-313)||(25538434-25538683)
chr6 (32-305)||(28325343-28325616)
chr6 (65-305)||(26848555-26848795)
chr6 (68-305)||(28242702-28242939)
chr6 (32-168)||(27427792-27427928)
chr6 (26-298)||(28185222-28185494)
chr6 (65-305)||(28226845-28227085)
chr6 (26-305)||(28180970-28181249)
chr6 (65-305)||(26635585-26635825)
chr6 (65-305)||(26741551-26741791)
chr6 (65-305)||(27665169-27665409)
chr6 (34-305)||(26341986-26342257)
chr6 (72-302)||(26959067-26959298)
chr6 (206-298)||(28139577-28139669)
chr6 (34-300)||(28098426-28098692)
chr6 (65-195)||(25071554-25071684)
chr6 (65-193)||(27214312-27214440)
chr6 (65-193)||(27234788-27234916)
chr6 (101-288)||(29825958-29826145)
chr6 (65-303)||(26974947-26975185)
chr6 (144-305)||(28149912-28150072)
chr6 (175-291)||(25506975-25507091)
chr6 (149-295)||(26937073-26937219)
chr6 (65-195)||(26949556-26949686)
chr6 (107-195)||(26617263-26617351)
chr6 (107-195)||(26723191-26723279)
chr6 (65-195)||(26811404-26811534)
chr6 (206-299)||(2184324-2184417)
chr6 (224-305)||(28297765-28297846)
chr6 (224-305)||(28514227-28514308)
chr6 (212-308)||(27427655-27427751)
chr6 (206-305)||(2184934-2185033)
chr6 (251-305)||(27214498-27214552)
chr6 (251-305)||(27234676-27234730)
chr6 (252-300)||(25071741-25071789)
[»] scaffold0349 (3 HSPs)
scaffold0349 (26-313)||(3465-3753)
scaffold0349 (26-313)||(14400-14686)
scaffold0349 (26-96)||(8062-8132)
[»] scaffold0277 (2 HSPs)
scaffold0277 (26-313)||(4715-5002)
scaffold0277 (1-313)||(13676-13982)
[»] scaffold0419 (1 HSPs)
scaffold0419 (27-313)||(7382-7668)
[»] scaffold1254 (1 HSPs)
scaffold1254 (27-264)||(10-247)
[»] chr4 (10 HSPs)
chr4 (26-313)||(18699431-18699718)
chr4 (26-313)||(18679598-18679885)
chr4 (26-313)||(18724116-18724403)
chr4 (26-313)||(18731535-18731822)
chr4 (26-313)||(18655508-18655795)
chr4 (32-168)||(17989226-17989362)
chr4 (32-168)||(18073627-18073763)
chr4 (71-305)||(5091006-5091240)
chr4 (212-308)||(17989089-17989185)
chr4 (212-308)||(18073804-18073900)
[»] chr1 (3 HSPs)
chr1 (88-308)||(268393-268613)
chr1 (26-313)||(28164393-28164680)
chr1 (32-313)||(28127710-28127992)
[»] chr8 (2 HSPs)
chr8 (26-313)||(29273814-29274101)
chr8 (47-196)||(31903728-31903877)
[»] scaffold0038 (4 HSPs)
scaffold0038 (35-305)||(34590-34860)
scaffold0038 (32-305)||(116658-116931)
scaffold0038 (68-305)||(42864-43101)
scaffold0038 (65-305)||(27343-27583)
[»] scaffold0019 (1 HSPs)
scaffold0019 (32-305)||(58334-58607)
[»] scaffold0003 (2 HSPs)
scaffold0003 (32-168)||(59435-59571)
scaffold0003 (212-308)||(59612-59708)
[»] chr2 (3 HSPs)
chr2 (74-305)||(3279592-3279823)
chr2 (65-195)||(17993846-17993976)
chr2 (252-305)||(17993736-17993789)
[»] chr5 (1 HSPs)
chr5 (103-298)||(16688944-16689139)


Alignment Details
Target: chr6 (Bit Score: 285; Significance: 1e-160; HSPs: 70)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 285; E-Value: 1e-160
Query Start/End: Original strand, 1 - 313
Target Start/End: Complemental strand, 27605061 - 27604749
Alignment:
Q  1 catggctatgcaattaccttcctcatcctcatcctcttcattttcctatgcattcacttaccaagtgttccttagttttaggggcactgacactcgatac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27605061 catggctatgcaattaccttcctcatcctcatcctcttcattttcctatgcattcacttaccaagtgttccttagttttaggggcactgacactcgatac 27604962  T
Q  101 ggttttaccggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcgaagaggagatgaaatcacaccagcac 200  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  27604961 ggttttaccggcaatctctacaaggctcttactgacaagggaattcataccttcattgatgaaaatgatcttcgaagaggagatgaaatcacaccagcac 27604862  T
Q  201 atctcaaagccattgatgaatccaggatttttattcttgtgttttctatcaactatgcctcttcttcgttttgtttggatgaacttgttcacatcattca 300  Q
     |||||| |||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||    
T  27604861 ttctcaaggccattgatgaatccaggatttttattcctgtgttttctatcaaatatgcctcttcttccttttgtttggatgaacttgttcacatcattca 27604762  T
Q  301 ttgctacacgaca 313  Q
    |||||||||||||    
T  27604761 ttgctacacgaca 27604749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 26 - 313
Target Start/End: Complemental strand, 27725176 - 27724889
Alignment:
Q  26 tcctcatcctcttcattttcctatgcattcacttaccaagtgttccttagttttaggggcactgacactcgatacggttttaccggcaatctctacaagg 125  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||||||||    
T  27725176 tcctcatcctcttcattttcctatggattcacttaccaagtgttccttagttttaggggcactgacactcggcacggttttaccggaaatctctacaagg 27725077  T
Q  126 ctcttactgacaagggaatccataccttcattgatgacaatgatcttcgaagaggagatgaaatcacaccagcacatctcaaagccattgatgaatccag 225  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||  ||||| |||||||||||||| ||    
T  27725076 ctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatctag 27724977  T
Q  226 gatttttattcttgtgttttctatcaactatgcctcttcttcgttttgtttggatgaacttgttcacatcattcattgctacacgaca 313  Q
    ||||||||||| ||||||||||||||||||||||| |||||||||||||||||| |||||||| ||||| ||||| ||||||| ||||    
T  27724976 gatttttattcctgtgttttctatcaactatgcctattcttcgttttgtttggacgaacttgtccacataattcactgctacaagaca 27724889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 26 - 313
Target Start/End: Complemental strand, 27611333 - 27611046
Alignment:
Q  26 tcctcatcctcttcattttcctatgcattcacttaccaagtgttccttagttttaggggcactgacactcgatacggttttaccggcaatctctacaagg 125  Q
    ||||| || |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||  ||||||||||||| |||||||||||||    
T  27611333 tcctcttcttcttcattttcctatggattcacttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccggaaatctctacaagg 27611234  T
Q  126 ctcttactgacaagggaatccataccttcattgatgacaatgatcttcgaagaggagatgaaatcacaccagcacatctcaaagccattgatgaatccag 225  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||  ||||| |||||||||||||| ||    
T  27611233 ctcttactgacaagggaatccataccttcattgatgacaatgatcttccaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatctag 27611134  T
Q  226 gatttttattcttgtgttttctatcaactatgcctcttcttcgttttgtttggatgaacttgttcacatcattcattgctacacgaca 313  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||| ||||||| ||||    
T  27611133 gatttttattcctgtgttttctatcaactatgcctcttcttcgttttgtttggacgaacttgtccacataattcactgctacaagaca 27611046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 26 - 313
Target Start/End: Complemental strand, 27718710 - 27718423
Alignment:
Q  26 tcctcatcctcttcattttcctatgcattcacttaccaagtgttccttagttttaggggcactgacactcgatacggttttaccggcaatctctacaagg 125  Q
    ||||||||||||||||| ||| ||| ||||||||||||||||||||| |||||||||||||||||||||||  || |||||||||| |||||||||||||    
T  27718710 tcctcatcctcttcattctcccatggattcacttaccaagtgttcctcagttttaggggcactgacactcggcacagttttaccggaaatctctacaagg 27718611  T
Q  126 ctcttactgacaagggaatccataccttcattgatgacaatgatcttcgaagaggagatgaaatcacaccagcacatctcaaagccattgatgaatccag 225  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||  ||||| |||||||||||||| ||    
T  27718610 ctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatctag 27718511  T
Q  226 gatttttattcttgtgttttctatcaactatgcctcttcttcgttttgtttggatgaacttgttcacatcattcattgctacacgaca 313  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||| ||||||| ||||    
T  27718510 gatttttattcctgtgttttctatcaactatgcctcttcttcgttttgtttggacgaacttgtccacataattcactgctacaagaca 27718423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 26 - 307
Target Start/End: Complemental strand, 27698825 - 27698544
Alignment:
Q  26 tcctcatcctcttcattttcctatgcattcacttaccaagtgttccttagttttaggggcactgacactcgatacggttttaccggcaatctctacaagg 125  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||| | |||||||||||||||||||||||  ||||||||||||| |||||||||||||    
T  27698825 tcctcatccacttcattttcctatggattcacttaccaagtgttcatcagttttaggggcactgacactcggcacggttttaccggaaatctctacaagg 27698726  T
Q  126 ctcttactgacaagggaatccataccttcattgatgacaatgatcttcgaagaggagatgaaatcacaccagcacatctcaaagccattgatgaatccag 225  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||  ||||| |||||||||||||| ||    
T  27698725 ctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatctag 27698626  T
Q  226 gatttttattcttgtgttttctatcaactatgcctcttcttcgttttgtttggatgaacttgttcacatcattcattgctac 307  Q
    ||||||||||| |||||||||| |||||||||| |||||||| ||||||||||| |||||||| ||||| ||||| ||||||    
T  27698625 gatttttattcctgtgttttctctcaactatgcatcttcttcattttgtttggacgaacttgtccacataattcactgctac 27698544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 313
Target Start/End: Original strand, 28780976 - 28781282
Alignment:
Q  1 catggctatgcaattaccttcctcatcctcatcctcttcattttcctatgcattcacttaccaagtgttccttagttttaggggcactgacactcgatac 100  Q
    |||||||||||||||||||||||| ||||      |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||  ||    
T  28780976 catggctatgcaattaccttcctcttcct------cttcattttcctctgcattcacttaccaagtgttcctcagttttaggggcactgacactcgccac 28781069  T
Q  101 ggttttaccggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcgaagaggagatgaaatcacaccagcac 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| |||||||||||||||||||||| |||    
T  28781070 ggttttaccggcaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcac 28781169  T
Q  201 atctcaaagccattgatgaatccaggatttttattcttgtgttttctatcaactatgcctcttcttcgttttgtttggatgaacttgttcacatcattca 300  Q
      ||||| ||||| || ||||| ||||||||||||| |||||||||||||||||||||| ||||    ||||| ||||| |||||||||||||| |||||    
T  28781170 tcctcaaggccatcgaagaatctaggatttttattcctgtgttttctatcaactatgccacttcaaaattttgcttggacgaacttgttcacattattca 28781269  T
Q  301 ttgctacacgaca 313  Q
    |||||||| ||||    
T  28781270 ttgctacaagaca 28781282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 26 - 306
Target Start/End: Original strand, 26802298 - 26802578
Alignment:
Q  26 tcctcatcctcttcattttcctatgcattcacttaccaagtgttccttagttttaggggcactgacactcgatacggttttaccggcaatctctacaagg 125  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  26802298 tcctcatcctcttcattttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaagg 26802397  T
Q  126 ctcttactgacaagggaatccataccttcattgatgacaatgatcttcgaagaggagatgaaatcacaccagcacatctcaaagccattgatgaatccag 225  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||   |||| |||||||| ||||| ||    
T  26802398 ctcttattgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatctag 26802497  T
Q  226 gatttttattcttgtgttttctatcaactatgcctcttcttcgttttgtttggatgaacttgttcacatcattcattgcta 306  Q
     |||||||||| |||||||||||||||||||||||||||    ||||| ||||| |||||||||||||| |||||||||||    
T  26802498 aatttttattcctgtgttttctatcaactatgcctcttcaaaattttgcttggacgaacttgttcacattattcattgcta 26802578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 26 - 313
Target Start/End: Original strand, 28786134 - 28786421
Alignment:
Q  26 tcctcatcctcttcattttcctatgcattcacttaccaagtgttccttagttttaggggcactgacactcgatacggttttaccggcaatctctacaagg 125  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||  ||||||||||||| |||||||||||||    
T  28786134 tcctcatcctcttcattttcctatggattcacttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccggaaatctctacaagg 28786233  T
Q  126 ctcttactgacaagggaatccataccttcattgatgacaatgatcttcgaagaggagatgaaatcacaccagcacatctcaaagccattgatgaatccag 225  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||| |||||||||||||||||||||| |||  ||||| ||||| || ||||| ||    
T  28786234 ctcttactgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatctag 28786333  T
Q  226 gatttttattcttgtgttttctatcaactatgcctcttcttcgttttgtttggatgaacttgttcacatcattcattgctacacgaca 313  Q
    ||||||||||| |||||||||||||||||| ||| | ||    ||||| ||||| |||||||||||||| ||||||||||||| ||||    
T  28786334 gatttttattcctgtgttttctatcaactacgccacatcaaaattttgcttggacgaacttgttcacattattcattgctacaagaca 28786421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 26 - 313
Target Start/End: Original strand, 28792255 - 28792542
Alignment:
Q  26 tcctcatcctcttcattttcctatgcattcacttaccaagtgttccttagttttaggggcactgacactcgatacggttttaccggcaatctctacaagg 125  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||  ||||||||||||| |||||||||||||    
T  28792255 tcctcatcctcttcattttcctatggattcacttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccggaaatctctacaagg 28792354  T
Q  126 ctcttactgacaagggaatccataccttcattgatgacaatgatcttcgaagaggagatgaaatcacaccagcacatctcaaagccattgatgaatccag 225  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||| |||||||||||||||||||||| |||  ||||| ||||| || ||||| ||    
T  28792355 ctcttactgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatctag 28792454  T
Q  226 gatttttattcttgtgttttctatcaactatgcctcttcttcgttttgtttggatgaacttgttcacatcattcattgctacacgaca 313  Q
    ||||||||||| |||||||||||||||||| ||| | ||    ||||| ||||| |||||||||||||| ||||||||||||| ||||    
T  28792455 gatttttattcctgtgttttctatcaactacgccacatcaaaattttgcttggacgaacttgttcacattattcattgctacaagaca 28792542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 26 - 277
Target Start/End: Original strand, 27229088 - 27229339
Alignment:
Q  26 tcctcatcctcttcattttcctatgcattcacttaccaagtgttccttagttttaggggcactgacactcgatacggttttaccggcaatctctacaagg 125  Q
    ||||| |||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  27229088 tcctcttcctcttcattttcctttggattcacttaccaagtgttccttagttttaggggcactgacactcggcacggttttaccggcaatctctacaagg 27229187  T
Q  126 ctcttactgacaagggaatccataccttcattgatgacaatgatcttcgaagaggagatgaaatcacaccagcacatctcaaagccattgatgaatccag 225  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| |||   |||| |||||||| |||||  |    
T  27229188 ctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagacgaaatcacaccatcactcgtcaaggccattgacgaatctcg 27229287  T
Q  226 gatttttattcttgtgttttctatcaactatgcctcttcttcgttttgtttg 277  Q
    |||||||||||   | ||||||  ||||||||| |||||||| |||||||||    
T  27229288 gatttttattcccatattttctgccaactatgcatcttcttcattttgtttg 27229339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 26 - 313
Target Start/End: Complemental strand, 27593351 - 27593064
Alignment:
Q  26 tcctcatcctcttcattttcctatgcattcacttaccaagtgttccttagttttaggggcactgacactcgatacggttttaccggcaatctctacaagg 125  Q
    ||||| ||| ||||| |||||||||  | ||  |||||||| ||||| ||||| || || | ||||||||| |||||||| |||||||||||||||||||    
T  27593351 tcctcttccacttcaatttcctatgattacaaataccaagtattcctcagtttcagaggaagtgacactcggtacggtttcaccggcaatctctacaagg 27593252  T
Q  126 ctcttactgacaagggaatccataccttcattgatgacaatgatcttcgaagaggagatgaaatcacaccagcacatctcaaagccattgatgaatccag 225  Q
    |||||||||||||||||||| | ||||||||||||||||||| ||||| ||||||| |||||||||||||| ||| |||||| |||||||| || || ||    
T  27593251 ctcttactgacaagggaatcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcacttctcaaggccattgaagagtctag 27593152  T
Q  226 gatttttattcttgtgttttctatcaactatgcctcttcttcgttttgtttggatgaacttgttcacatcattcattgctacacgaca 313  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||||| ||||    
T  27593151 gatttttattcctgtgttttctatcaactatgcctcttcttcgttttgtttggacgaacttgaccacatcattcattgctacaagaca 27593064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 26 - 306
Target Start/End: Original strand, 26655845 - 26656125
Alignment:
Q  26 tcctcatcctcttcattttcctatgcattcacttaccaagtgttccttagttttaggggcactgacactcgatacggttttaccggcaatctctacaagg 125  Q
    |||||||||||||||||||||||||  || |  |||||||||||||| ||||||||||||| |||||| ||  |||||||||||||||||||||||||||    
T  26655845 tcctcatcctcttcattttcctatgggtttaaataccaagtgttcctcagttttaggggcattgacacccggcacggttttaccggcaatctctacaagg 26655944  T
Q  126 ctcttactgacaagggaatccataccttcattgatgacaatgatcttcgaagaggagatgaaatcacaccagcacatctcaaagccattgatgaatccag 225  Q
    |||||| ||| |||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||||| |||   | || |||||||| ||||||||    
T  26655945 ctcttattgataagggaatccatactttcattgatgacaatgatcttctcagaggagatgaaatcacaccatcactcgttaaggccattgaagaatccag 26656044  T
Q  226 gatttttattcttgtgttttctatcaactatgcctcttcttcgttttgtttggatgaacttgttcacatcattcattgcta 306  Q
    |||||||||||   | ||||||  ||||||||| |||||||| ||||||||||| |||||||| |||||||||||||||||    
T  26656045 gatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcattgcta 26656125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 26 - 306
Target Start/End: Original strand, 26761816 - 26762096
Alignment:
Q  26 tcctcatcctcttcattttcctatgcattcacttaccaagtgttccttagttttaggggcactgacactcgatacggttttaccggcaatctctacaagg 125  Q
    |||||||||||||||||||||||||  || |  |||||||||||||| ||||||||||||| |||||| ||  |||||||||||||||||||||||||||    
T  26761816 tcctcatcctcttcattttcctatgggtttaaataccaagtgttcctcagttttaggggcattgacacccggcacggttttaccggcaatctctacaagg 26761915  T
Q  126 ctcttactgacaagggaatccataccttcattgatgacaatgatcttcgaagaggagatgaaatcacaccagcacatctcaaagccattgatgaatccag 225  Q
    |||||| ||| |||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||||| |||   | || |||||||| ||||||||    
T  26761916 ctcttattgataagggaatccatactttcattgatgacaatgatcttctcagaggagatgaaatcacaccatcactcgttaaggccattgaagaatccag 26762015  T
Q  226 gatttttattcttgtgttttctatcaactatgcctcttcttcgttttgtttggatgaacttgttcacatcattcattgcta 306  Q
    |||||||||||   | ||||||  ||||||||| |||||||| ||||||||||| |||||||| |||||||||||||||||    
T  26762016 gatttttattcccatattttctgccaactatgcatcttcttcattttgtttggacgaacttgtccacatcattcattgcta 26762096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 26 - 313
Target Start/End: Original strand, 27678802 - 27679089
Alignment:
Q  26 tcctcatcctcttcattttcctatgcattcacttaccaagtgttccttagttttaggggcactgacactcgatacggttttaccggcaatctctacaagg 125  Q
    ||||| ||| ||||| |||||||||  | ||  |||||||| ||||| ||||| || || | ||||||||| |||||||| ||||| |||||||||||||    
T  27678802 tcctcttccacttcaatttcctatgagtacaaataccaagtattcctcagtttcagaggaagtgacactcggtacggtttcaccgggaatctctacaagg 27678901  T
Q  126 ctcttactgacaagggaatccataccttcattgatgacaatgatcttcgaagaggagatgaaatcacaccagcacatctcaaagccattgatgaatccag 225  Q
    |||||||||||||||||||| | |||||||||||| | |||| ||||| |||||||||||||||||||||| ||| |||||| |||||||| || || ||    
T  27678902 ctcttactgacaagggaatcaacaccttcattgataagaatggtcttcaaagaggagatgaaatcacaccatcacttctcaaggccattgaagagtctag 27679001  T
Q  226 gatttttattcttgtgttttctatcaactatgcctcttcttcgttttgtttggatgaacttgttcacatcattcattgctacacgaca 313  Q
    ||||||||||| |||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||| ||||||| ||||    
T  27679002 gatttttattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagaca 27679089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 51 - 307
Target Start/End: Complemental strand, 27531503 - 27531247
Alignment:
Q  51 cattcacttaccaagtgttccttagttttaggggcactgacactcgatacggttttaccggcaatctctacaaggctcttactgacaagggaatccatac 150  Q
    |||||||||||||||||||||| |||||||||||| | ||||||||  ||||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  27531503 cattcacttaccaagtgttcctcagttttaggggcgcggacactcgccacggttttaccggaaatctctacaaggctcttactgacaagggaatctatac 27531404  T
Q  151 cttcattgatgacaatgatcttcgaagaggagatgaaatcacaccagcacatctcaaagccattgatgaatccaggatttttattcttgtgttttctatc 250  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| |||     || ||||||||  |||| |||||||||||||  || ||||||       
T  27531403 cttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactaaaaaatgccattgaaaaatctaggatttttattcccgtattttctgaa 27531304  T
Q  251 aactatgcctcttcttcgttttgtttggatgaacttgttcacatcattcattgctac 307  Q
    |||||||| |||||||| ||||||||||| |||||||||||||||| ||||||||||    
T  27531303 aactatgcatcttcttcattttgtttggacgaacttgttcacatcactcattgctac 27531247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 1 - 313
Target Start/End: Original strand, 26646310 - 26646622
Alignment:
Q  1 catggctatgcaattaccttcctcatcctcatcctcttcattttcctatgcattcacttaccaagtgttccttagttttaggggcactgacactcgatac 100  Q
    ||||||||||||||  |||||||  ||||| ||||||| | ||||||| | |||||| ||||| || ||||| |  || ||||||| |||||||||  ||    
T  26646310 catggctatgcaatctccttcctattcctcttcctctttaatttcctacggattcacctaccaggtcttcctcaacttcaggggcagtgacactcgtgac 26646409  T
Q  101 ggttttaccggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcgaagaggagatgaaatcacaccagcac 200  Q
    |||||||| ||  ||||||||||||||||||||||||||||||| || ||||||||||||||   |||||||   ||||||||||||||||||||| |||    
T  26646410 ggttttactggacatctctacaaggctcttactgacaagggaattcacaccttcattgatgattgtgatcttaagagaggagatgaaatcacaccatcac 26646509  T
Q  201 atctcaaagccattgatgaatccaggatttttattcttgtgttttctatcaactatgcctcttcttcgttttgtttggatgaacttgttcacatcattca 300  Q
       |||| |||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||   ||||||||||| |||||||| |||||||||||    
T  26646510 tcatcaaggccattgaagaatctaggatttttattcctgtgttttctatcaactatgcctcttctaaattttgtttggacgaacttgtccacatcattca 26646609  T
Q  301 ttgctacacgaca 313  Q
    |||||||| ||||    
T  26646610 ttgctacaagaca 26646622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 1 - 313
Target Start/End: Original strand, 26752278 - 26752590
Alignment:
Q  1 catggctatgcaattaccttcctcatcctcatcctcttcattttcctatgcattcacttaccaagtgttccttagttttaggggcactgacactcgatac 100  Q
    ||||||||||||||  |||||||  ||||| ||||||| | ||||||| | |||||| ||||| || ||||| |  || ||||||| |||||||||  ||    
T  26752278 catggctatgcaatctccttcctattcctcttcctctttaatttcctacggattcacctaccaggtcttcctcaacttcaggggcagtgacactcgtgac 26752377  T
Q  101 ggttttaccggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcgaagaggagatgaaatcacaccagcac 200  Q
    |||||||| ||  ||||||||||||||||||||||||||||||| || ||||||||||||||   |||||||   ||||||||||||||||||||| |||    
T  26752378 ggttttactggacatctctacaaggctcttactgacaagggaattcacaccttcattgatgattgtgatcttaagagaggagatgaaatcacaccatcac 26752477  T
Q  201 atctcaaagccattgatgaatccaggatttttattcttgtgttttctatcaactatgcctcttcttcgttttgtttggatgaacttgttcacatcattca 300  Q
       |||| |||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||   ||||||||||| |||||||| |||||||||||    
T  26752478 tcatcaaggccattgaagaatctaggatttttattcctgtgttttctatcaactatgcctcttctaaattttgtttggacgaacttgtccacatcattca 26752577  T
Q  301 ttgctacacgaca 313  Q
    |||||||| ||||    
T  26752578 ttgctacaagaca 26752590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 26 - 300
Target Start/End: Original strand, 31284144 - 31284418
Alignment:
Q  26 tcctcatcctcttcattttcctatgcattcacttaccaagtgttccttagttttaggggcactgacactcgatacggttttaccggcaatctctacaagg 125  Q
    ||||| ||||||||| ||||||||| |||||  |||||||| ||||||||||| ||||| | ||||||||| || ||||| |||||||||||||||||||    
T  31284144 tcctcttcctcttcaatttcctatgtattcaaataccaagtattccttagtttcaggggaagtgacactcggtatggtttcaccggcaatctctacaagg 31284243  T
Q  126 ctcttactgacaagggaatccataccttcattgatgacaatgatcttcgaagaggagatgaaatcacaccagcacatctcaaagccattgatgaatccag 225  Q
    |||||||||||||||||||||| |||||||||||||| | ||| |||| |||||| ||||||||||||||| |||    ||| |||||||| || || ||    
T  31284244 ctcttactgacaagggaatccacaccttcattgatgatagtgaacttcaaagaggggatgaaatcacaccatcactcgacaatgccattgaagagtctag 31284343  T
Q  226 gatttttattcttgtgttttctatcaactatgcctcttcttcgttttgtttggatgaacttgttcacatcattca 300  Q
    ||||||||| |  |||||||||  ||||||||||||||| |||||||||||||| |||||||| |||||||||||    
T  31284344 gatttttatccccgtgttttctgccaactatgcctcttcgtcgttttgtttggacgaacttgtccacatcattca 31284418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 26 - 313
Target Start/End: Complemental strand, 27677945 - 27677658
Alignment:
Q  26 tcctcatcctcttcattttcctatgcattcacttaccaagtgttccttagttttaggggcactgacactcgatacggttttaccggcaatctctacaagg 125  Q
    ||||| ||| ||||| |||||||||  | ||  |||||||| ||||| | ||| || || | ||||||||| |||||||| |||||||||||||||||||    
T  27677945 tcctcttccacttcaatttcctatgagtacaaataccaagtattcctcaatttcagaggaagtgacactcggtacggtttcaccggcaatctctacaagg 27677846  T
Q  126 ctcttactgacaagggaatccataccttcattgatgacaatgatcttcgaagaggagatgaaatcacaccagcacatctcaaagccattgatgaatccag 225  Q
    |||||  ||||||||||||||| |||||||||||  |  |||| |||| |||||| ||||||||||||||| ||| |||||| |||||||| || || ||    
T  27677845 ctcttgatgacaagggaatccacaccttcattgacaatcatgaacttcaaagaggggatgaaatcacaccatcacttctcaaggccattgaagagtctag 27677746  T
Q  226 gatttttattcttgtgttttctatcaactatgcctcttcttcgttttgtttggatgaacttgttcacatcattcattgctacacgaca 313  Q
    ||||||||||  |||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||| ||||||| ||||    
T  27677745 gatttttattgctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagaca 27677658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 24 - 308
Target Start/End: Original strand, 26622830 - 26623114
Alignment:
Q  24 catcctcatcctcttcattttcctatgcattcacttaccaagtgttccttagttttaggggcactgacactcgatacggttttaccggcaatctctacaa 123  Q
    ||||||| ||||||||| ||||||||  |||||  |||||||||||||| ||||| || |||| ||||||||| |||||||| || || |||||||||||    
T  26622830 catcctcttcctcttcaatttcctatcaattcaaataccaagtgttcctaagtttcagaggcagtgacactcggtacggtttcactggaaatctctacaa 26622929  T
Q  124 ggctcttactgacaagggaatccataccttcattgatgacaatgatcttcgaagaggagatgaaatcacaccagcacatctcaaagccattgatgaatcc 223  Q
    |||||||||||||||||||||||| ||||||||||||||   ||| |||| |||||| || ||||||| |||| ||| |  ||| || || || || ||     
T  26622930 ggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcaaagaggggacgaaatcaaaccatcacttgacaatgctatcgaagagtct 26623029  T
Q  224 aggatttttattcttgtgttttctatcaactatgcctcttcttcgttttgtttggatgaacttgttcacatcattcattgctaca 308  Q
    ||||||||||||| ||||||||||  ||||||||| | |||||| |||||||||||||||||||| ||||||||||| |||||||    
T  26623030 aggatttttattcctgtgttttctcccaactatgcatattcttcattttgtttggatgaacttgtccacatcattcactgctaca 26623114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 24 - 308
Target Start/End: Original strand, 26728808 - 26729092
Alignment:
Q  24 catcctcatcctcttcattttcctatgcattcacttaccaagtgttccttagttttaggggcactgacactcgatacggttttaccggcaatctctacaa 123  Q
    ||||||| ||||||||| ||||||||  |||||  |||||||||||||| ||||| || |||| ||||||||| |||||||| || || |||||||||||    
T  26728808 catcctcttcctcttcaatttcctatcaattcaaataccaagtgttcctaagtttcagaggcagtgacactcggtacggtttcactggaaatctctacaa 26728907  T
Q  124 ggctcttactgacaagggaatccataccttcattgatgacaatgatcttcgaagaggagatgaaatcacaccagcacatctcaaagccattgatgaatcc 223  Q
    |||||||||||||||||||||||| ||||||||||||||   ||| |||| |||||| || ||||||| |||| ||| |  ||| || || || || ||     
T  26728908 ggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcaaagaggggacgaaatcaaaccatcacttgacaatgctatcgaagagtct 26729007  T
Q  224 aggatttttattcttgtgttttctatcaactatgcctcttcttcgttttgtttggatgaacttgttcacatcattcattgctaca 308  Q
    ||||||||||||| ||||||||||  ||||||||| | |||||| |||||||||||||||||||| ||||||||||| |||||||    
T  26729008 aggatttttattcctgtgttttctcccaactatgcatattcttcattttgtttggatgaacttgtccacatcattcactgctaca 26729092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 26 - 313
Target Start/End: Complemental strand, 27338396 - 27338109
Alignment:
Q  26 tcctcatcctcttcattttcctatgcattcacttaccaagtgttccttagttttaggggcactgacactcgatacggttttaccggcaatctctacaagg 125  Q
    ||||| ||||||||| |||||| ||  ||||  ||||| |||||||| |||||||||| || ||||||||  ||||||||||||||||||||||||||||    
T  27338396 tcctcttcctcttcaatttcctctgggttcaaataccatgtgttcctcagttttagggacattgacactctttacggttttaccggcaatctctacaagg 27338297  T
Q  126 ctcttactgacaagggaatccataccttcattgatgacaatgatcttcgaagaggagatgaaatcacaccagcacatctcaaagccattgatgaatccag 225  Q
    |||||| ||||||||||||| | ||||||||||||||||| ||||||  |||||||||||||| ||||||| ||| | |||| |||||||| || || ||    
T  27338296 ctcttattgacaagggaatcaaaaccttcattgatgacaacgatcttgaaagaggagatgaaagcacaccatcacttgtcaaggccattgaagagtctag 27338197  T
Q  226 gatttttattcttgtgttttctatcaactatgcctcttcttcgttttgtttggatgaacttgttcacatcattcattgctacacgaca 313  Q
    |||||| ||||   | ||||||   |||||||| |||||||| ||||| ||||| |||||||| ||||||||||| ||||||| ||||    
T  27338196 gattttgattcccatattttctgcaaactatgcatcttcttcattttgcttggacgaacttgtccacatcattcactgctacaagaca 27338109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 26 - 313
Target Start/End: Complemental strand, 27399136 - 27398849
Alignment:
Q  26 tcctcatcctcttcattttcctatgcattcacttaccaagtgttccttagttttaggggcactgacactcgatacggttttaccggcaatctctacaagg 125  Q
    ||||| ||||||||| |||||| ||  ||||  ||||| |||||||| |||||||||| || ||||||||  ||||||||||||||||||||||||||||    
T  27399136 tcctcttcctcttcaatttcctctgggttcaaataccatgtgttcctcagttttagggacattgacactctttacggttttaccggcaatctctacaagg 27399037  T
Q  126 ctcttactgacaagggaatccataccttcattgatgacaatgatcttcgaagaggagatgaaatcacaccagcacatctcaaagccattgatgaatccag 225  Q
    |||||| ||||||||||||| | ||||||||||||||||| ||||||  |||||||||||||| ||||||| ||| | |||| |||||||| || || ||    
T  27399036 ctcttattgacaagggaatcaaaaccttcattgatgacaacgatcttgaaagaggagatgaaagcacaccatcacttgtcaaggccattgaagagtctag 27398937  T
Q  226 gatttttattcttgtgttttctatcaactatgcctcttcttcgttttgtttggatgaacttgttcacatcattcattgctacacgaca 313  Q
    |||||| ||||   | ||||||   |||||||| |||||||| ||||| ||||| |||||||| ||||||||||| ||||||| ||||    
T  27398936 gattttgattcccatattttctgcaaactatgcatcttcttcattttgcttggacgaacttgtccacatcattcactgctacaagaca 27398849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 32 - 294
Target Start/End: Original strand, 26884025 - 26884287
Alignment:
Q  32 tcctcttcattttcctatgcattcacttaccaagtgttccttagttttaggggcactgacactcgatacggttttaccggcaatctctacaaggctctta 131  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||| || || | ||||||||| || ||||| || || |||||||||||||||||||    
T  26884025 tcctcttcattttcctatggattcacttaccaagtgttcctcagtttcagaggaagtgacactcggtatggtttcactggaaatctctacaaggctctta 26884124  T
Q  132 ctgacaagggaatccataccttcattgatgacaatgatcttcgaagaggagatgaaatcacaccagcacatctcaaagccattgatgaatccaggatttt 231  Q
    || ||||||||||||| |||||||||||||| ||| |||||| |||||||   |||||||||||| |||   |||| |||||||| ||||| || |||||    
T  26884125 ctaacaagggaatccacaccttcattgatgataatcatcttccaagaggaagcgaaatcacaccatcactcatcaaggccattgaagaatctagaatttt 26884224  T
Q  232 tattcttgtgttttctatcaactatgcctcttcttcgttttgtttggatgaacttgttcacat 294  Q
    |||||   | ||||||| ||||||||| |||||||| ||||||||||| |||||||| |||||    
T  26884225 tattccaatattttctaccaactatgcatcttcttcattttgtttggacgaacttgtccacat 26884287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 59 - 313
Target Start/End: Complemental strand, 27706700 - 27706446
Alignment:
Q  59 taccaagtgttccttagttttaggggcactgacactcgatacggttttaccggcaatctctacaaggctcttactgacaagggaatccataccttcattg 158  Q
    |||||||| ||||| ||||| || ||   ||||||||| |||||||| || |||||||||||||||||| ||  ||||||||||||||| ||||||||||    
T  27706700 taccaagtattcctcagtttcagaggaggtgacactcggtacggtttcacaggcaatctctacaaggcttttgatgacaagggaatccacaccttcattg 27706601  T
Q  159 atgacaatgatcttcgaagaggagatgaaatcacaccagcacatctcaaagccattgatgaatccaggatttttattcttgtgttttctatcaactatgc 258  Q
    |  |  |||| |||| |||| | ||||||||||||||| ||| |||||| |||||||| || || ||||||||||||| |||||||||||||| ||||||    
T  27706600 acaatcatgaacttcaaagaagggatgaaatcacaccatcacttctcaaggccattgaagagtctaggatttttattcctgtgttttctatcacctatgc 27706501  T
Q  259 ctcttcttcgttttgtttggatgaacttgttcacatcattcattgctacacgaca 313  Q
    ||||||||| ||||||||||| |||||||| ||||||||||| ||||||| ||||    
T  27706500 ctcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagaca 27706446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 64 - 313
Target Start/End: Original strand, 25579613 - 25579862
Alignment:
Q  64 agtgttccttagttttaggggcactgacactcgatacggttttaccggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgac 163  Q
    ||||||||| ||||| || |||| |||||||||  ||  ||||||||| |||||||| |||||||||  |||||||||||| | ||||||| |||||||     
T  25579613 agtgttcctcagtttcagaggcagtgacactcgcaacacttttaccggtaatctctataaggctcttgttgacaagggaattcgtaccttctttgatgat 25579712  T
Q  164 aatgatcttcgaagaggagatgaaatcacaccagcacatctcaaagccattgatgaatccaggatttttattcttgtgttttctatcaactatgcctctt 263  Q
    |||||||||| |||||||||||||||||||||| ||| | |||| |||||||| ||||| |||||||||||||   | ||||||  ||||||||| ||||    
T  25579713 aatgatcttcaaagaggagatgaaatcacaccatcacttgtcaaggccattgaagaatctaggatttttattcccatattttctgccaactatgcatctt 25579812  T
Q  264 cttcgttttgtttggatgaacttgttcacatcattcattgctacacgaca 313  Q
    |||| ||||||||||| |||||||| ||||||||||| ||||||| ||||    
T  25579813 cttcattttgtttggacgaacttgtccacatcattcactgctacaagaca 25579862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 64 - 313
Target Start/End: Original strand, 25481636 - 25481885
Alignment:
Q  64 agtgttccttagttttaggggcactgacactcgatacggttttaccggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgac 163  Q
    ||||||||| | ||| ||||||| |||||||||  ||  ||||||||| |||||||| |||||||||  |||||||||||| | ||| |||||||||||     
T  25481636 agtgttcctcaatttcaggggcagtgacactcgcaacaattttaccggtaatctctataaggctcttgttgacaagggaattcgtactttcattgatgaa 25481735  T
Q  164 aatgatcttcgaagaggagatgaaatcacaccagcacatctcaaagccattgatgaatccaggatttttattcttgtgttttctatcaactatgcctctt 263  Q
    |||||||||| |||||||||||||||||||||| ||| | |||| |||||||| ||||| ||||||| |||||   | ||||||  ||||||||| ||||    
T  25481736 aatgatcttcaaagaggagatgaaatcacaccatcacttgtcaaggccattgaagaatctaggatttgtattcccatattttctgccaactatgcatctt 25481835  T
Q  264 cttcgttttgtttggatgaacttgttcacatcattcattgctacacgaca 313  Q
    |||| ||||||||||| |||||||| ||||||||||| ||||||| ||||    
T  25481836 cttcattttgtttggacgaacttgtccacatcattcactgctacaagaca 25481885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 64 - 313
Target Start/End: Original strand, 26142759 - 26143008
Alignment:
Q  64 agtgttccttagttttaggggcactgacactcgatacggttttaccggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgac 163  Q
    ||||||||| ||||| ||||||| |||||||||  ||   |||||||| |||||||| |||||||||  |||||||||||| | ||| |||||||||||     
T  26142759 agtgttcctcagtttcaggggcagtgacactcgcaacaaatttaccggtaatctctataaggctcttgttgacaagggaattcgtactttcattgatgat 26142858  T
Q  164 aatgatcttcgaagaggagatgaaatcacaccagcacatctcaaagccattgatgaatccaggatttttattcttgtgttttctatcaactatgcctctt 263  Q
    |||||||||  |||||||||||||||||||||| ||| | |||| |||||||| ||||| |||||||||||||   | ||||||  ||||||||| ||||    
T  26142859 aatgatcttgaaagaggagatgaaatcacaccatcacttgtcaaggccattgaagaatctaggatttttattcccatattttctgccaactatgcatctt 26142958  T
Q  264 cttcgttttgtttggatgaacttgttcacatcattcattgctacacgaca 313  Q
    |||| ||||||||||| |||||||| ||||||||||| ||||||| ||||    
T  26142959 cttcattttgtttggacgaacttgtccacatcattcactgctacaagaca 26143008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 64 - 308
Target Start/End: Original strand, 26055820 - 26056064
Alignment:
Q  64 agtgttccttagttttaggggcactgacactcgatacggttttaccggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgac 163  Q
    ||||||||| | ||| ||||||| |||||||||  ||  ||||||||| |||||||| |||||||||  ||||||||||||  |||| |||||||||||     
T  26055820 agtgttcctcattttcaggggcagtgacactcgcaacaattttaccggtaatctctataaggctcttgttgacaagggaattaatactttcattgatgaa 26055919  T
Q  164 aatgatcttcgaagaggagatgaaatcacaccagcacatctcaaagccattgatgaatccaggatttttattcttgtgttttctatcaactatgcctctt 263  Q
    |||||||||| ||||||||||||||||||| || ||| | |||| ||||| || |||||  ||||||||||||   | ||||||  ||||||||| ||||    
T  26055920 aatgatcttcaaagaggagatgaaatcacatcatcacttgtcaaggccatcgaagaatctgggatttttattcccatattttctgccaactatgcatctt 26056019  T
Q  264 cttcgttttgtttggatgaacttgttcacatcattcattgctaca 308  Q
    |||| ||||||||||| |||||||| ||||||||||| |||||||    
T  26056020 cttcattttgtttggacgaacttgtccacatcattcactgctaca 26056064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 64 - 308
Target Start/End: Original strand, 26075790 - 26076034
Alignment:
Q  64 agtgttccttagttttaggggcactgacactcgatacggttttaccggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgac 163  Q
    ||||||||| | ||| ||||||| |||||||||  ||  ||||||||| |||||||| |||||||||  ||||||||||||  |||| |||||||||||     
T  26075790 agtgttcctcaatttcaggggcagtgacactcgcaacaattttaccggtaatctctataaggctcttgttgacaagggaattaatactttcattgatgaa 26075889  T
Q  164 aatgatcttcgaagaggagatgaaatcacaccagcacatctcaaagccattgatgaatccaggatttttattcttgtgttttctatcaactatgcctctt 263  Q
    |||||||||| ||||||||||||||||||| || ||| | |||| ||||| || |||||  ||||||||||||   | ||||||  ||||||||| ||||    
T  26075890 aatgatcttcaaagaggagatgaaatcacatcatcacttgtcaaggccatcgaagaatctgggatttttattcccatattttctgccaactatgcatctt 26075989  T
Q  264 cttcgttttgtttggatgaacttgttcacatcattcattgctaca 308  Q
    |||| ||||||||||| |||||||| ||||||||||| |||||||    
T  26075990 cttcattttgtttggacgaacttgtccacatcattcactgctaca 26076034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 64 - 313
Target Start/End: Original strand, 26048739 - 26048988
Alignment:
Q  64 agtgttccttagttttaggggcactgacactcgatacggttttaccggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgac 163  Q
    ||||||||| ||||| ||||||| |||||||||  ||  ||||||||| |||||||| |||||||| | ||||||||||||   ||| |||||||||||     
T  26048739 agtgttcctcagtttcaggggcagtgacactcgcaacaattttaccggtaatctctataaggctctcattgacaagggaatttgtactttcattgatgat 26048838  T
Q  164 aatgatcttcgaagaggagatgaaatcacaccagcacatctcaaagccattgatgaatccaggatttttattcttgtgttttctatcaactatgcctctt 263  Q
    |||||||||  |||||||||||||||||||||   || | |||| ||||| || ||||| |||||||||||||   | ||||||  ||||||||| ||||    
T  26048839 aatgatcttgaaagaggagatgaaatcacacccaaacttgtcaaggccatggaagaatctaggatttttattcccatattttctgccaactatgcatctt 26048938  T
Q  264 cttcgttttgtttggatgaacttgttcacatcattcattgctacacgaca 313  Q
    |||| ||||||||||| |||||||| ||||||||||| ||||||| ||||    
T  26048939 cttcattttgtttggacgaacttgtccacatcattcactgctacaagaca 26048988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 64 - 313
Target Start/End: Original strand, 26069908 - 26070157
Alignment:
Q  64 agtgttccttagttttaggggcactgacactcgatacggttttaccggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgac 163  Q
    ||||||||| ||||| ||||||| |||||||||  ||  ||||||||| |||||||| |||||||| | ||||||||||||   ||| |||||||||||     
T  26069908 agtgttcctcagtttcaggggcagtgacactcgcaacaattttaccggtaatctctataaggctctcattgacaagggaatttgtactttcattgatgat 26070007  T
Q  164 aatgatcttcgaagaggagatgaaatcacaccagcacatctcaaagccattgatgaatccaggatttttattcttgtgttttctatcaactatgcctctt 263  Q
    |||||||||  |||||||||||||||||||||   || | |||| ||||| || ||||| |||||||||||||   | ||||||  ||||||||| ||||    
T  26070008 aatgatcttgaaagaggagatgaaatcacacccaaacttgtcaaggccatggaagaatctaggatttttattcccatattttctgccaactatgcatctt 26070107  T
Q  264 cttcgttttgtttggatgaacttgttcacatcattcattgctacacgaca 313  Q
    |||| ||||||||||| |||||||| ||||||||||| ||||||| ||||    
T  26070108 cttcattttgtttggacgaacttgtccacatcattcactgctacaagaca 26070157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 32 - 299
Target Start/End: Original strand, 26823702 - 26823969
Alignment:
Q  32 tcctcttcattttcctatgcattcacttaccaagtgttccttagttttaggggcactgacactcgatacggttttaccggcaatctctacaaggctctta 131  Q
    ||||||||| |||| ||||  ||||  ||||||||||| || |||||||| ||| |||||||||| || |  ||||||||||||||||||||||||||||    
T  26823702 tcctcttcagtttcatatgatttcaaataccaagtgtttctcagttttagaggcgctgacactcggtatgaatttaccggcaatctctacaaggctctta 26823801  T
Q  132 ctgacaagggaatccataccttcattgatgacaatgatcttcgaagaggagatgaaatcacaccagcacatctcaaagccattgatgaatccaggatttt 231  Q
    | |||||||||||||| |||||  |||||||   ||| |||| |||||| ||| |||||  || | |||     || |||||||| || || ||||||||    
T  26823802 cagacaagggaatccacaccttttttgatgatcgtgaacttcaaagaggggataaaatcgaacaatcactcaataatgccattgaagagtctaggatttt 26823901  T
Q  232 tattcttgtgttttctatcaactatgcctcttcttcgttttgtttggatgaacttgttcacatcattc 299  Q
    ||||| ||||||||||  |||||||||||||||||| ||||||||||| |||||||| ||||||||||    
T  26823902 tattcctgtgttttctgccaactatgcctcttcttcattttgtttggacgaacttgtccacatcattc 26823969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 35 - 298
Target Start/End: Original strand, 28234429 - 28234692
Alignment:
Q  35 tcttcattttcctatgcattcacttaccaagtgttccttagttttaggggcactgacactcgatacggttttaccggcaatctctacaaggctcttactg 134  Q
    ||||| || ||||||| |||||| ||  | ||||||||||||||||| || | ||||||||| || ||||||||||  |||||||| |  ||||||  |     
T  28234429 tcttctttctcctatggattcacctatgacgtgttccttagttttagaggtagtgacactcgctatggttttaccgaaaatctctatagagctctttgtc 28234528  T
Q  135 acaagggaatccataccttcattgatgacaatgatcttcgaagaggagatgaaatcacaccagcacatctcaaagccattgatgaatccaggatttttat 234  Q
    ||||||||||||| ||||||||||||||||  || |||| | ||||||||||||| |||||| ||| | |||| |||||||| || || |||||||| ||    
T  28234529 acaagggaatccacaccttcattgatgacagggagcttcaaggaggagatgaaataacaccatcacttttcaaggccattgaagagtctaggattttcat 28234628  T
Q  235 tcttgtgttttctatcaactatgcctcttcttcgttttgtttggatgaacttgttcacatcatt 298  Q
    || ||| || |||||||| ||||| |||||||| ||||| ||||| |||||||| |||||||||    
T  28234629 tcctgtcttgtctatcaattatgcttcttcttcattttgcttggacgaacttgtccacatcatt 28234692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 32 - 298
Target Start/End: Original strand, 26861478 - 26861744
Alignment:
Q  32 tcctcttcattttcctatgcattcacttaccaagtgttccttagttttaggggcactgacactcgatacggttttaccggcaatctctacaaggctctta 131  Q
    ||||||||  ||||||||| |||||  ||||| || ||||| ||||| || || | ||||||||| || ||||||||||| |||||||||||||||||||    
T  26861478 tcctcttccatttcctatggattcaaataccaggtattcctcagtttcagaggaagtgacactcggtatggttttaccggtaatctctacaaggctctta 26861577  T
Q  132 ctgacaagggaatccataccttcattgatgacaatgatcttcgaagaggagatgaaatcacaccagcacatctcaaagccattgatgaatccaggatttt 231  Q
    ||||||||||||| || |||||||| |||||   ||| |||| |||||| |||||||||| |  | |||    ||| |||||||| || || || |||||    
T  26861578 ctgacaagggaattcacaccttcatggatgatcgtgaacttcaaagaggggatgaaatcaaaagatcactcgacaatgccattgaagagtctagaatttt 26861677  T
Q  232 tattcttgtgttttctatcaactatgcctcttcttcgttttgtttggatgaacttgttcacatcatt 298  Q
     |||| ||||||||||  ||||||||||||||| || |||||||||||||||||||| || ||||||    
T  26861678 cattcctgtgttttctgccaactatgcctcttcgtcattttgtttggatgaacttgtccaaatcatt 26861744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 64 - 313
Target Start/End: Original strand, 25538434 - 25538683
Alignment:
Q  64 agtgttccttagttttaggggcactgacactcgatacggttttaccggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgac 163  Q
    ||||||||| ||||| ||||||| |||||||||  ||   |||||||| |||||||| |||||||||  ||||||||||||   ||| ||||| |||||     
T  25538434 agtgttcctcagtttcaggggcagtgacactcgcaacaaatttaccggtaatctctataaggctcttgttgacaagggaattagtactttcatagatgat 25538533  T
Q  164 aatgatcttcgaagaggagatgaaatcacaccagcacatctcaaagccattgatgaatccaggatttttattcttgtgttttctatcaactatgcctctt 263  Q
    |||||||||  |||||||||||||||||||||| ||| | |||| ||||| || ||||| || ||||||||||   | ||||||  ||||||||| ||||    
T  25538534 aatgatcttgaaagaggagatgaaatcacaccatcacttgtcaaggccatcgaagaatctagaatttttattcccatattttctgccaactatgcatctt 25538633  T
Q  264 cttcgttttgtttggatgaacttgttcacatcattcattgctacacgaca 313  Q
    |||| ||||||||||| |||||||| || |||||||| ||||||| ||||    
T  25538634 cttcattttgtttggacgaacttgtccagatcattcactgctacaagaca 25538683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 32 - 305
Target Start/End: Original strand, 28325343 - 28325616
Alignment:
Q  32 tcctcttcattttcctatgcattcacttaccaagtgttccttagttttaggggcactgacactcgatacggttttaccggcaatctctacaaggctctta 131  Q
    |||||||| |||||||||| |||||| ||  | ||||||||||||||||| || | ||||||||| || |||||||| || ||||||||||| | ||||     
T  28325343 tcctcttccttttcctatggattcacctatgacgtgttccttagttttagaggtagtgacactcgttatggttttactggaaatctctacaaagatcttt 28325442  T
Q  132 ctgacaagggaatccataccttcattgatgacaatgatcttcgaagaggagatgaaatcacaccagcacatctcaaagccattgatgaatccaggatttt 231  Q
     |   ||| |||| | |||||||||||||||||| || |||| | |||| || ||||| |||||  ||| | |||| |||||||| || || ||||||||    
T  28325443 gtaggaagagaattcgtaccttcattgatgacaaagaccttcaacgaggtgacgaaataacaccgtcacttttcaaggccattgaagagtctaggatttt 28325542  T
Q  232 tattcttgtgttttctatcaactatgcctcttcttcgttttgtttggatgaacttgttcacatcattcattgct 305  Q
     |||| | | || |||||||| ||||| |||||||| ||||| |||||||||||||| ||||| ||||| ||||    
T  28325543 cattcctattttgtctatcaattatgcttcttcttccttttgcttggatgaacttgtccacattattcactgct 28325616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 65 - 305
Target Start/End: Original strand, 26848555 - 26848795
Alignment:
Q  65 gtgttccttagttttaggggcactgacactcgatacggttttaccggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgaca 164  Q
    |||||| ||||||| |||||||| |||||| ||| | |||| || || |||||||| || |||||| ||||||| |||||||  ||||||||||||||||    
T  26848555 gtgttcattagtttcaggggcaccgacactagattcagtttcactggtaatctctataaagctctttctgacaatggaatccgaaccttcattgatgaca 26848654  T
Q  165 atgatcttcgaagaggagatgaaatcacaccagcacatctcaaagccattgatgaatccaggatttttattcttgtgttttctatcaactatgcctcttc 264  Q
    | |||||||  || || ||||| ||||||||  | |  |||||   |||||| || || |||||||  |||||||| || |||   ||||||||| ||||    
T  26848655 aggatcttcagagtggtgatgagatcacaccttcgctcctcaagaacattgaagactcgaggatttccattcttgtattctctgagaactatgccacttc 26848754  T
Q  265 ttcgttttgtttggatgaacttgttcacatcattcattgct 305  Q
    ||||||||||||||| |||||||| ||||||||||||||||    
T  26848755 ttcgttttgtttggacgaacttgtccacatcattcattgct 26848795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 68 - 305
Target Start/End: Original strand, 28242702 - 28242939
Alignment:
Q  68 ttccttagttttaggggcactgacactcgatacggttttaccggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatg 167  Q
    |||||||||||||| || | ||||||||| || |||||||| || ||||||||||| | ||||  | | |||||||| |  ||||||||||||||||  |    
T  28242702 ttccttagttttagaggtagtgacactcgttatggttttactggaaatctctacaaagatctttgtaagaagggaattcgcaccttcattgatgacagag 28242801  T
Q  168 atcttcgaagaggagatgaaatcacaccagcacatctcaaagccattgatgaatccaggatttttattcttgtgttttctatcaactatgcctcttcttc 267  Q
    | |||| | |||| ||  |||| |||||| ||| | |||| |||||||| || || |||||||| |||| ||| || |||||||| ||||| ||||||||    
T  28242802 aacttccaggaggtgacaaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcctgtcttgtctatcaattatgcttcttcttc 28242901  T
Q  268 gttttgtttggatgaacttgttcacatcattcattgct 305  Q
     ||||| ||||| |||||||| ||||||||||| ||||    
T  28242902 attttgcttggacgaacttgtccacatcattcactgct 28242939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 32 - 168
Target Start/End: Complemental strand, 27427928 - 27427792
Alignment:
Q  32 tcctcttcattttcctatgcattcacttaccaagtgttccttagttttaggggcactgacactcgatacggttttaccggcaatctctacaaggctctta 131  Q
    ||||||||||||||||||||||||| |||| | |||||||| | || || |||||| |||||||| |||||||| |||||||||||||  ||||||||||    
T  27427928 tcctcttcattttcctatgcattcagttacgatgtgttcctcatttgtaagggcaccgacactcggtacggtttcaccggcaatctcttgaaggctctta 27427829  T
Q  132 ctgacaagggaatccataccttcattgatgacaatga 168  Q
     |||||||||||| | |||||||  ||||||| ||||    
T  27427828 ttgacaagggaattcgtaccttccatgatgacgatga 27427792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 26 - 298
Target Start/End: Original strand, 28185222 - 28185494
Alignment:
Q  26 tcctcatcctcttcattttcctatgcattcacttaccaagtgttccttagttttaggggcactgacactcgatacggttttaccggcaatctctacaagg 125  Q
    |||||||||||||| || ||||||| |||||| ||  | ||||||||||| ||||| || | ||||||||| ||  ||||||| || |||||| | |  |    
T  28185222 tcctcatcctcttccttctcctatggattcacctatgacgtgttccttagctttagaggtagtgacactcgttatcgttttactggaaatctcaatagag 28185321  T
Q  126 ctcttactgacaagggaatccataccttcattgatgacaatgatcttcgaagaggagatgaaatcacaccagcacatctcaaagccattgatgaatccag 225  Q
    |||||  ||||||||||||||  |||||||| |||||||  || |||| | |||| || ||||| ||| || ||| | |||| |||||||| || || ||    
T  28185322 ctctttgtgacaagggaatccgaaccttcatggatgacagagagcttcaaggaggtgaagaaataacatcatcacttttcaaggccattgaagagtctag 28185421  T
Q  226 gatttttattcttgtgttttctatcaactatgcctcttcttcgttttgtttggatgaacttgttcacatcatt 298  Q
    |||||| ||||  || || |||||||| ||||| |||||||| ||||| ||||| |||||||| |||||||||    
T  28185422 gattttcattcccgtcttgtctatcaattatgcttcttcttcattttgcttggacgaacttgtccacatcatt 28185494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 65 - 305
Target Start/End: Original strand, 28226845 - 28227085
Alignment:
Q  65 gtgttccttagttttaggggcactgacactcgatacggttttaccggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgaca 164  Q
    ||||||||||||||||| || | ||||||||| || |||||||| || ||||||||||  | ||||  | | |||||||| || || ||| ||||||| |    
T  28226845 gtgttccttagttttagaggtattgacactcgttatggttttactggaaatctctacagtgatctttgtaagaagggaattcacacattctttgatgata 28226944  T
Q  165 atgatcttcgaagaggagatgaaatcacaccagcacatctcaaagccattgatgaatccaggatttttattcttgtgttttctatcaactatgcctcttc 264  Q
      || |||| | |||| |||||||| ||| || ||| | |||| | |||||| ||||| |||||||| |||| ||| || |||||||| ||||| |||||    
T  28226945 gagagcttcaaggaggtgatgaaataacatcatcacttttcaaggtcattgaagaatctaggattttcattcctgtcttgtctatcaattatgcttcttc 28227044  T
Q  265 ttcgttttgtttggatgaacttgttcacatcattcattgct 305  Q
    ||| ||||| ||||| |||||||| ||||||||||||||||    
T  28227045 ttcattttgcttggacgaacttgtccacatcattcattgct 28227085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 26 - 305
Target Start/End: Original strand, 28180970 - 28181249
Alignment:
Q  26 tcctcatcctcttcattttcctatgcattcacttaccaagtgttccttagttttaggggcactgacactcgatacggttttaccggcaatctctacaagg 125  Q
    |||||||||||||| || ||||||| |||||| ||  | | ||||||||| ||||| ||   ||||||||| || |||||||| || |||||| | |  |    
T  28180970 tcctcatcctcttccttctcctatggattcacctatgacgcgttccttagctttagaggtggtgacactcgttatggttttactggaaatctcaatagag 28181069  T
Q  126 ctcttactgacaagggaatccataccttcattgatgacaatgatcttcgaagaggagatgaaatcacaccagcacatctcaaagccattgatgaatccag 225  Q
    |||||  ||||||||||||||  |||||||| |||||||  || |||| | |||| || ||||| ||| || ||| | |||| |||||||| || || ||    
T  28181070 ctctttgtgacaagggaatccgaaccttcatggatgacagagagcttcaaggaggtgaagaaataacatcatcacttttcaaggccattgaagagtctag 28181169  T
Q  226 gatttttattcttgtgttttctatcaactatgcctcttcttcgttttgtttggatgaacttgttcacatcattcattgct 305  Q
    |||||| ||||  || || |||||||| ||||| |||||||| ||||| ||||| |||||||| ||||||||||| ||||    
T  28181170 gattttcattcccgtcttgtctatcaattatgcttcttcttcattttgcttggacgaacttgtccacatcattcactgct 28181249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 65 - 305
Target Start/End: Original strand, 26635585 - 26635825
Alignment:
Q  65 gtgttccttagttttaggggcactgacactcgatacggttttaccggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgaca 164  Q
    |||||| ||||||| |||||||| ||||||| || |||||| ||||| || ||||| || |||||| ||||||| |||||| | ||||||||||||||||    
T  26635585 gtgttcattagtttcaggggcaccgacactcaattcggtttcaccggtaacctctataaagctctttctgacaaaggaatcaacaccttcattgatgaca 26635684  T
Q  165 atgatcttcgaagaggagatgaaatcacaccagcacatctcaaagccattgatgaatccaggatttttattcttgtgttttctatcaactatgcctcttc 264  Q
    | || |||  || ||| ||||||||||||||  | |  |||||   |||||| || || ||||||   ||| | || || ||||   | ||||| |||||    
T  26635685 aggagcttaaaaaaggggatgaaatcacaccttcgctcctcaagagcattgaagagtcgaggattgccattatcgttttctctaaggaatatgcttcttc 26635784  T
Q  265 ttcgttttgtttggatgaacttgttcacatcattcattgct 305  Q
    || ||||||||||||||||||||| ||||||||||||||||    
T  26635785 tttgttttgtttggatgaacttgtccacatcattcattgct 26635825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 65 - 305
Target Start/End: Original strand, 26741551 - 26741791
Alignment:
Q  65 gtgttccttagttttaggggcactgacactcgatacggttttaccggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgaca 164  Q
    |||||| ||||||| |||||||| ||||||| || |||||| ||||| || ||||| || |||||| ||||||| |||||| | ||||||||||||||||    
T  26741551 gtgttcattagtttcaggggcaccgacactcaattcggtttcaccggtaacctctataaagctctttctgacaaaggaatcaacaccttcattgatgaca 26741650  T
Q  165 atgatcttcgaagaggagatgaaatcacaccagcacatctcaaagccattgatgaatccaggatttttattcttgtgttttctatcaactatgcctcttc 264  Q
    | || |||  || ||| ||||||||||||||  | |  |||||   |||||| || || ||||||   ||| | || || ||||   | ||||| |||||    
T  26741651 aggagcttaaaaaaggggatgaaatcacaccttcgctcctcaagagcattgaagagtcgaggattgccattatcgttttctctaaggaatatgcttcttc 26741750  T
Q  265 ttcgttttgtttggatgaacttgttcacatcattcattgct 305  Q
    || ||||||||||||||||||||| ||||||||||||||||    
T  26741751 tttgttttgtttggatgaacttgtccacatcattcattgct 26741791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 65 - 305
Target Start/End: Complemental strand, 27665409 - 27665169
Alignment:
Q  65 gtgttccttagttttaggggcactgacactcgatacggttttaccggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgaca 164  Q
    |||||| ||||||| ||||| || ||||||||||  ||||| ||||| || ||||| ||||||||| ||||||| |||||||| ||||||||||||||||    
T  27665409 gtgttcattagtttcaggggtaccgacactcgatttggtttcaccggtaacctctataaggctctttctgacaaaggaatccacaccttcattgatgaca 27665310  T
Q  165 atgatcttcgaagaggagatgaaatcacaccagcacatctcaaagccattgatgaatccaggatttttattcttgtgttttctatcaactatgcctcttc 264  Q
    | || |||| ||  || || |||||||||||  |||  |  ||   |||||| ||||| ||||||   ||| || | || ||||  ||||||||  ||||    
T  27665309 aggagcttccaactggtgacgaaatcacaccttcactccggaagagcattgaagaatcgaggattgccattattatattctctaagaactatgctacttc 27665210  T
Q  265 ttcgttttgtttggatgaacttgttcacatcattcattgct 305  Q
    ||| |||||||| ||||||||||| ||||||||||||||||    
T  27665209 ttcattttgtttagatgaacttgtccacatcattcattgct 27665169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 34 - 305
Target Start/End: Complemental strand, 26342257 - 26341986
Alignment:
Q  34 ctcttcattttcctatgcattcacttaccaagtgttccttagttttaggggcactgacactcgatacggttttaccggcaatctctacaaggctcttact 133  Q
    ||||||||| || |||| |||||| ||  | |||||||| | ||||||||||| || |||||| || |||||||| |||||| |||| |  |||||   |    
T  26342257 ctcttcattctcatatggattcacatatgatgtgttcctcaattttaggggcattggcactcgctatggttttactggcaatatctatagagctctatgt 26342158  T
Q  134 gacaagggaatccataccttcattgatgacaatgatcttcgaagaggagatgaaatcacaccagcacatctcaaagccattgatgaatccaggattttta 233  Q
    |||   ||| |||  |||||||||||||| |  || ||||   |||| ||  ||||||||| | ||| | ||||||||||||| || ||||||||||| |    
T  26342157 gacggtggagtccgcaccttcattgatgatagggagcttcatggaggtgacaaaatcacacaatcacttgtcaaagccattgaagagtccaggattttca 26342058  T
Q  234 ttcttgtgttttctatcaactatgcctcttcttcgttttgtttggatgaacttgttcacatcattcattgct 305  Q
    |||   | || || ||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||    
T  26342057 ttccaattttctcaatcaactatgcttcttcttcgttttgtttggacgaacttgtccacatcattcattgct 26341986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 72 - 302
Target Start/End: Original strand, 26959067 - 26959298
Alignment:
Q  72 ttagttttaggggcactgacactcgatacggttttaccggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatct 171  Q
    ||||||| |||||||| |||||||||| | |||| ||||| || ||||| || |||||| ||||||| |||||| | ||||||||||||||||| || ||    
T  26959067 ttagtttcaggggcaccgacactcgattcagtttcaccggtaacctctataaagctctttctgacaaaggaatcgacaccttcattgatgacaaagagct 26959166  T
Q  172 tcgaagaggagatgaaatcacaccagcacatctcaaag-ccattgatgaatccaggatttttattcttgtgttttctatcaactatgcctcttcttcgtt 270  Q
    |  || ||| ||||||||||||||  | | ||||||||  |||||| || || ||||||   ||| | || || ||||   | ||||| |||||||||||    
T  26959167 taaaaaaggggatgaaatcacaccttcgcttctcaaagagcattgaagactcgaggattgccattatcgttttctctaaggaatatgcttcttcttcgtt 26959266  T
Q  271 ttgtttggatgaacttgttcacatcattcatt 302  Q
    || ||||||||||||||| |||||||||||||    
T  26959267 ttatttggatgaacttgtccacatcattcatt 26959298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 206 - 298
Target Start/End: Original strand, 28139577 - 28139669
Alignment:
Q  206 aaagccattgatgaatccaggatttttattcttgtgttttctatcaactatgcctcttcttcgttttgtttggatgaacttgttcacatcatt 298  Q
    ||||||||||| ||||| |||||||| || | ||||||||| |||||||||||||||||||||||||| ||||| |||||||| |||||||||    
T  28139577 aaagccattgaagaatctaggattttcatccctgtgttttccatcaactatgcctcttcttcgttttgcttggacgaacttgtccacatcatt 28139669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 34 - 300
Target Start/End: Complemental strand, 28098692 - 28098426
Alignment:
Q  34 ctcttcattttcctatgcattcacttaccaagtgttccttagttttaggggcactgacactcgatacggttttaccggcaatctctacaaggctcttact 133  Q
    ||||||||| || |||| |||||| ||  | ||||| |||| |||||||||||| |||||||| || |||||||| || ||||||||||| ||||||  |    
T  28098692 ctcttcattctcttatggattcacctatgacgtgtttcttaattttaggggcaccgacactcggtatggttttactggaaatctctacaaagctctttgt 28098593  T
Q  134 gacaagggaatccataccttcattgatgacaatgatcttcgaagaggagatgaaatcacaccagcacatctcaaagccattgatgaatccaggattttta 233  Q
    |||   ||| |||  |||||||||||  | || |||||||    ||| |||  |||||||| | | | | |||| ||||| || || ||||||||||| |    
T  28098592 gacggaggagtccgcaccttcattgaccataaagatcttcatgaaggtgatagaatcacacaatcccttgtcaaggccatcgaagagtccaggattttaa 28098493  T
Q  234 ttcttgtgttttctatcaactatgcctcttcttcgttttgtttggatgaacttgttcacatcattca 300  Q
    |||  || || ||||  |||||||| ||||||| ||||||||||||||||||||| |||||||||||    
T  28098492 ttccggtcttctctaagaactatgcttcttctttgttttgtttggatgaacttgtccacatcattca 28098426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 65 - 195
Target Start/End: Original strand, 25071554 - 25071684
Alignment:
Q  65 gtgttccttagttttaggggcactgacactcgatacggttttaccggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgaca 164  Q
    |||||| ||||||| ||||| || |||||||||| |||||||||||| ||||| || || |||||| ||||||| |||||||| ||||| ||||||||||    
T  25071554 gtgttcattagtttcaggggtaccgacactcgattcggttttaccggtaatctttataaagctctttctgacaaaggaatccacacctttattgatgaca 25071653  T
Q  165 atgatcttcgaagaggagatgaaatcacacc 195  Q
    | || |||   ||||| || |||||||||||    
T  25071654 aagagcttaagagaggtgacgaaatcacacc 25071684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 65 - 193
Target Start/End: Original strand, 27214312 - 27214440
Alignment:
Q  65 gtgttccttagttttaggggcactgacactcgatacggttttaccggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgaca 164  Q
    |||||| ||||||| ||||| || ||||||||| ||||||| ||||| |||||||| || ||||||  |||||| |||||||  ||||||||||||||||    
T  27214312 gtgttcattagtttcaggggtaccgacactcgacacggtttcaccggtaatctctataaagctctttgtgacaaaggaatccgaaccttcattgatgaca 27214411  T
Q  165 atgatcttcgaagaggagatgaaatcaca 193  Q
    | || ||||  ||||| || |||||||||    
T  27214412 aggagcttcagagaggtgacgaaatcaca 27214440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 65 - 193
Target Start/End: Complemental strand, 27234916 - 27234788
Alignment:
Q  65 gtgttccttagttttaggggcactgacactcgatacggttttaccggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgaca 164  Q
    |||||| ||||||| ||||| || ||||||||| ||||||| ||||| |||||||| || ||||||  |||||| |||||||  ||||||||||||||||    
T  27234916 gtgttcattagtttcaggggtaccgacactcgacacggtttcaccggtaatctctataaagctctttgtgacaaaggaatccgaaccttcattgatgaca 27234817  T
Q  165 atgatcttcgaagaggagatgaaatcaca 193  Q
    | || ||||  ||||| || |||||||||    
T  27234816 aggagcttcagagaggtgacgaaatcaca 27234788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 101 - 288
Target Start/End: Original strand, 29825958 - 29826145
Alignment:
Q  101 ggttttaccggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcgaagaggagatgaaatcacaccagcac 200  Q
    ||||||||||||||||||||||| ||||| |||||||||  ||| |  ||||||||||||||||| || |||| |||||| || |||||||||||  |||    
T  29825958 ggttttaccggcaatctctacaaagctctaactgacaagaaaattcgcaccttcattgatgacaaagagcttcaaagaggggacgaaatcacaccctcac 29826057  T
Q  201 atctcaaagccattgatgaatccaggatttttattcttgtgttttctatcaactatgcctcttcttcgttttgtttggatgaacttgt 288  Q
     | | || || ||| | ||||| |||||    |||| | | || |||| ||| ||||| |||||||||||||| || |||||||||||    
T  29826058 ttgtgaaggcaattcaagaatctaggatagccattcctattttctctaccaattatgcttcttcttcgttttgcttagatgaacttgt 29826145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 65 - 303
Target Start/End: Original strand, 26974947 - 26975185
Alignment:
Q  65 gtgttccttagttttaggggcactgacactcgatacggttttaccggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgaca 164  Q
    |||||| ||||||| || || || |||||||||| |||||| ||||| || ||||| || |||||| ||||||| |||||| | | ||||||||||||||    
T  26974947 gtgttcattagtttcagaggtaccgacactcgattcggtttcaccggtaacctctataaagctctttctgacaaaggaatcaacatcttcattgatgaca 26975046  T
Q  165 atgatcttcgaagaggagatgaaatcacaccagcacatctcaaagccattgatgaatccaggatttttattcttgtgttttctatcaactatgcctcttc 264  Q
    | || |||  || ||| || |||||||||||  | |  |||||   |||||| || || ||||||   ||| | || || ||||   ||||||| |||||    
T  26975047 aggagcttaaaaaaggggacgaaatcacaccttcgctcctcaagagcattgaagactcgaggattaccattatcgtcttctctaaagactatgcttcttc 26975146  T
Q  265 ttcgttttgtttggatgaacttgttcacatcattcattg 303  Q
    ||| ||||||||||| |||||||| ||||||||||||||    
T  26975147 ttcattttgtttggacgaacttgtccacatcattcattg 26975185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 144 - 305
Target Start/End: Original strand, 28149912 - 28150072
Alignment:
Q  144 tccataccttcattgatgacaatgatcttcgaagaggagatgaaatcacaccagcacatctcaaagccattgatgaatccaggatttttattcttgtgtt 243  Q
    |||| |||||||||||||| |  || |||  | |||| || |||||||||||| ||| |||||| |||||||| || ||||||||||| ||||   | ||    
T  28149912 tccacaccttcattgatgatacggagctttaacgaggggacgaaatcacaccatcac-tctcaaggccattgaagagtccaggattttcattccaatctt 28150010  T
Q  244 ttctatcaactatgcctcttcttcgttttgtttggatgaacttgttcacatcattcattgct 305  Q
     |||||||||||| | |||||||| ||||||||||| |||||||| ||||| ||||| ||||    
T  28150011 ctctatcaactatacttcttcttcattttgtttggacgaacttgtccacattattcactgct 28150072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 175 - 291
Target Start/End: Complemental strand, 25507091 - 25506975
Alignment:
Q  175 aagaggagatgaaatcacaccagcacatctcaaagccattgatgaatccaggatttttattcttgtgttttctatcaactatgcctcttcttcgttttgt 274  Q
    |||||||||||||||||||||| ||    |||  |||||||| ||||| |||||||||||||  ||  ||||||||||||||||||||||    ||||||    
T  25507091 aagaggagatgaaatcacaccatcagtcgtcatcgccattgaagaatctaggatttttattccggttctttctatcaactatgcctcttcaaaattttgt 25506992  T
Q  275 ttggatgaacttgttca 291  Q
    ||||| |||||||||||    
T  25506991 ttggaggaacttgttca 25506975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 149 - 295
Target Start/End: Original strand, 26937073 - 26937219
Alignment:
Q  149 accttcattgatgacaatgatcttcgaagaggagatgaaatcacaccagcacatctcaaagccattgatgaatccaggatttttattcttgtgttttcta 248  Q
    ||||||||||||||||| || || |   ||||||| |||||||||||| ||| | |||| || ||||| || ||| |||||   || | ||| || ||||    
T  26937073 accttcattgatgacaaggagctccatggaggagaagaaatcacaccatcacttgtcaaggcaattgaagattccgggattgccatacctgtattctcta 26937172  T
Q  249 tcaactatgcctcttcttcgttttgtttggatgaacttgttcacatc 295  Q
    ||||||||||| ||||||| ||||||||||| |||||||| ||||||    
T  26937173 tcaactatgccacttcttcattttgtttggacgaacttgtccacatc 26937219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 65 - 195
Target Start/End: Original strand, 26949556 - 26949686
Alignment:
Q  65 gtgttccttagttttaggggcactgacactcgatacggttttaccggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgaca 164  Q
    |||||| ||||||| || || || |||||||||| |||||| ||||| |||||||| || |||||  |||||||||||||||  |||||||||||||| |    
T  26949556 gtgttcattagtttcagaggtaccgacactcgattcggtttcaccggtaatctctataaagctctctctgacaagggaatccgaaccttcattgatgata 26949655  T
Q  165 atgatcttcgaagaggagatgaaatcacacc 195  Q
    | || ||||  | ||| || |||||||||||    
T  26949656 aggagcttcagaaaggtgacgaaatcacacc 26949686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 107 - 195
Target Start/End: Original strand, 26617263 - 26617351
Alignment:
Q  107 accggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcgaagaggagatgaaatcacacc 195  Q
    |||||||||||||| || ||||||  |||||| ||| |||  ||||||||||||||||| || ||||  ||||| ||||||||||||||    
T  26617263 accggcaatctctataaagctctttgtgacaaaggagtccgaaccttcattgatgacaaggagcttcagagaggtgatgaaatcacacc 26617351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 107 - 195
Target Start/End: Original strand, 26723191 - 26723279
Alignment:
Q  107 accggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcgaagaggagatgaaatcacacc 195  Q
    |||||||||||||| || ||||||  |||||| ||| |||  ||||||||||||||||| || ||||  ||||| ||||||||||||||    
T  26723191 accggcaatctctataaagctctttgtgacaaaggagtccgaaccttcattgatgacaaggagcttcagagaggtgatgaaatcacacc 26723279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 65 - 195
Target Start/End: Original strand, 26811404 - 26811534
Alignment:
Q  65 gtgttccttagttttaggggcactgacactcgatacggttttaccggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgaca 164  Q
    |||||| ||||||| ||||| |  ||||||||||  || || |||||  ||||||| || ||||||  |||||| |||||||  ||||||||||||||||    
T  26811404 gtgttcattagtttcaggggtatcgacactcgatctggcttcaccggtcatctctataaagctctttgtgacaaaggaatccgaaccttcattgatgaca 26811503  T
Q  165 atgatcttcgaagaggagatgaaatcacacc 195  Q
    | || ||||  ||||| || |||||||||||    
T  26811504 aggagcttcagagaggtgacgaaatcacacc 26811534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 206 - 299
Target Start/End: Original strand, 2184324 - 2184417
Alignment:
Q  206 aaagccattgatgaatccaggatttttattcttgtgttttctatcaactatgcctcttcttcgttttgtttggatgaacttgttcacatcattc 299  Q
    ||||||||||| || ||||| ||||| || | ||| || || |  |||||||| |||||||| ||||||||||| |||||||| ||||||||||    
T  2184324 aaagccattgaagagtccagaattttcatccctgttttctcaaagaactatgcttcttcttcattttgtttggacgaacttgtccacatcattc 2184417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 224 - 305
Target Start/End: Complemental strand, 28297846 - 28297765
Alignment:
Q  224 aggatttttattcttgtgttttctatcaactatgcctcttcttcgttttgtttggatgaacttgttcacatcattcattgct 305  Q
    |||||||| |||| ||| || |||| ||| ||||| |||||||| ||||| ||||| |||||||| ||||||||||| ||||    
T  28297846 aggattttcattcctgtcttatctaccaattatgcttcttcttcattttgcttggacgaacttgtccacatcattcactgct 28297765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 224 - 305
Target Start/End: Original strand, 28514227 - 28514308
Alignment:
Q  224 aggatttttattcttgtgttttctatcaactatgcctcttcttcgttttgtttggatgaacttgttcacatcattcattgct 305  Q
    |||||||| |||| ||| || |||| ||| ||||| |||||||| ||||| ||||| |||||||| ||||||||||| ||||    
T  28514227 aggattttcattcctgtcttatctaccaattatgcttcttcttcattttgcttggacgaacttgtccacatcattcactgct 28514308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 308
Target Start/End: Complemental strand, 27427751 - 27427655
Alignment:
Q  212 attgatgaatccaggatttttattcttgtgttttctatcaactatgcctcttcttcgttttgtttggatgaacttgttcacatcattcattgctaca 308  Q
    ||||| |||||||||||||| ||||   | ||||||  ||||||||| |||||||| | |||||||||   |||||| ||||||||||| |||||||    
T  27427751 attgaagaatccaggattttgattcccatattttctgccaactatgcatcttcttcatcttgtttggacacacttgtccacatcattcactgctaca 27427655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 206 - 305
Target Start/End: Original strand, 2184934 - 2185033
Alignment:
Q  206 aaagccattgatgaatccaggatttttattcttgtgttttctatcaactatgcctcttcttcgttttgtttggatgaacttgttcacatcattcattgct 305  Q
    ||||||||||| |||||||| ||||| || | ||| || || |   ||||||| |||||||| ||||||||||| |||||||| || ||||||| |||||    
T  2184934 aaagccattgaagaatccagaattttcatccctgttttctcaaaggactatgcttcttcttcattttgtttggacgaacttgtccatatcattcgttgct 2185033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 305
Target Start/End: Original strand, 27214498 - 27214552
Alignment:
Q  251 aactatgcctcttcttcgttttgtttggatgaacttgttcacatcattcattgct 305  Q
    ||||||||  ||||||| ||||||||||| |||||||| ||||||| ||||||||    
T  27214498 aactatgctacttcttcattttgtttggacgaacttgtccacatcactcattgct 27214552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 305
Target Start/End: Complemental strand, 27234730 - 27234676
Alignment:
Q  251 aactatgcctcttcttcgttttgtttggatgaacttgttcacatcattcattgct 305  Q
    ||||||||  ||||||| ||||||||||| |||||||| ||||||| ||||||||    
T  27234730 aactatgctacttcttcattttgtttggacgaacttgtccacatcactcattgct 27234676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 252 - 300
Target Start/End: Original strand, 25071741 - 25071789
Alignment:
Q  252 actatgcctcttcttcgttttgtttggatgaacttgttcacatcattca 300  Q
    ||||||| |||||||| |||||||| || |||||||| |||||||||||    
T  25071741 actatgcttcttcttcattttgtttagacgaacttgtccacatcattca 25071789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 217; Significance: 1e-119; HSPs: 3)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 26 - 313
Target Start/End: Complemental strand, 3753 - 3465
Alignment:
Q  26 tcctcatcctcttcattttcctatgcattcacttaccaagtgttccttagttttaggggcactgacactcgatacggttttaccggcaatctctacaagg 125  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||||||||    
T  3753 tcctcatcctcttcattttcctatggattcacttaccaagtgttccttagttttaggggcactgacactcggcacggttttaccggaaatctctacaagg 3654  T
Q  126 ctcttactgacaagggaatccataccttcattgatgacaatgatcttcgaagaggagatgaaatcacaccagcacatctcaaagccattgatgaatccag 225  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||  ||||| |||||||||||||| ||    
T  3653 ctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatctag 3554  T
Q  226 gatttttattcttgtgttttctatcaa-ctatgcctcttcttcgttttgtttggatgaacttgttcacatcattcattgctacacgaca 313  Q
    ||||||||||| ||||||||||||||| ||||||||||||||| ||||||||||| |||||||| ||||||||||| ||||||| ||||    
T  3553 gatttttattcctgtgttttctatcaacctatgcctcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagaca 3465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #2
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 26 - 313
Target Start/End: Complemental strand, 14686 - 14400
Alignment:
Q  26 tcctcatcctcttcattttcctatgcattcacttaccaagtgttccttagttttaggggcactgacactcgatacggttttaccggcaatctctacaagg 125  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||| | |||||||||||||||||||||||  ||||||||||||| |||||||||||||    
T  14686 tcctcatccacttcattttcctatggattcacttaccaagtgttcatcagttttaggggcactgacactcggcacggttttaccggaaatctctacaagg 14587  T
Q  126 ctcttactgacaagggaatccataccttcattgatgacaatgatcttcgaagaggagatgaaatcacaccagcacatctcaaagccattgatgaatccag 225  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||  ||||| |||||||||||||| ||    
T  14586 ctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatctag 14487  T
Q  226 gatttttattcttgtgttttctatcaactatgcctcttcttcgttttgtttggatgaacttgttcacatcattcattgctacacgaca 313  Q
    ||||||||||| ||||||||||||||||||||||| |||||||||||||||||| |||||||| ||||| ||||| ||||||| ||||    
T  14486 gatttttattcctgtgttttctatcaactatgcct-ttcttcgttttgtttggacgaacttgtccacataattcactgctacaagaca 14400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 26 - 96
Target Start/End: Complemental strand, 8132 - 8062
Alignment:
Q  26 tcctcatcctcttcattttcctatgcattcacttaccaagtgttccttagttttaggggcactgacactcg 96  Q
    ||||||||||||||||| ||| ||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  8132 tcctcatcctcttcattctcccatggattcacttaccaagtgttcctcagttttaggggcactgacactcg 8062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277 (Bit Score: 188; Significance: 1e-102; HSPs: 2)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 26 - 313
Target Start/End: Complemental strand, 5002 - 4715
Alignment:
Q  26 tcctcatcctcttcattttcctatgcattcacttaccaagtgttccttagttttaggggcactgacactcgatacggttttaccggcaatctctacaagg 125  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| |||||||||  ||||||||||||| |||||||||||||    
T  5002 tcctcatcctcttcattttcctatggattcacttaccaagtgttcctcagttttaggggcattgacactcgccacggttttaccggaaatctctacaagg 4903  T
Q  126 ctcttactgacaagggaatccataccttcattgatgacaatgatcttcgaagaggagatgaaatcacaccagcacatctcaaagccattgatgaatccag 225  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||| |||||||||||||||||||||| | |  | ||| |||||||||||||| ||    
T  4902 ctcttactgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatccctccgcaaggccattgatgaatctag 4803  T
Q  226 gatttttattcttgtgttttctatcaactatgcctcttcttcgttttgtttggatgaacttgttcacatcattcattgctacacgaca 313  Q
    ||||||||||| |||||||||||||  |||||||| |||||||||||||||||| |||||||| ||||| ||||| ||||||| ||||    
T  4802 gatttttattcctgtgttttctatcttctatgccttttcttcgttttgtttggacgaacttgtccacataattcactgctacaagaca 4715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #2
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 313
Target Start/End: Complemental strand, 13982 - 13676
Alignment:
Q  1 catggctatgcaattaccttcctcatcctcatcctcttcattttcctatgcattcacttaccaagtgttccttagttttaggggcactgacactcgatac 100  Q
    |||||||||||||||||||||||| |||||      ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||  ||    
T  13982 catggctatgcaattaccttcctcttcctc------ttcattttcctctgcattcacttaccaagtgttcctcagttttaggggcactgacactcgccac 13889  T
Q  101 ggttttaccggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcgaagaggagatgaaatcacaccagcac 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| |||||||||||||||||||||| |||    
T  13888 ggttttaccggcaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcac 13789  T
Q  201 atctcaaagccattgatgaatccaggatttttattcttgtgttttctatcaactatgcctcttcttcgttttgtttggatgaacttgttcacatcattca 300  Q
      ||||| ||||| || ||||| ||||||||||||| |||||||||||||||||| ||| ||||    ||||| ||||| |||||||||||||| |||||    
T  13788 tcctcaaggccatcgaagaatctaggatttttattcctgtgttttctatcaactacgccacttcaaaattttgcttggacgaacttgttcacattattca 13689  T
Q  301 ttgctacacgaca 313  Q
    |||||||| ||||    
T  13688 ttgctacaagaca 13676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 27 - 313
Target Start/End: Original strand, 7382 - 7668
Alignment:
Q  27 cctcatcctcttcattttcctatgcattcacttaccaagtgttccttagttttaggggcactgacactcgatacggttttaccggcaatctctacaaggc 126  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  7382 cctcttcctcttcattttcatatgcattcacttaccaagtgttccttagttttaggggcactgacactcgccacggttttaccggcaatctctacaaggc 7481  T
Q  127 tcttactgacaagggaatccataccttcattgatgacaatgatcttcgaagaggagatgaaatcacaccagcacatctcaaagccattgatgaatccagg 226  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||| |||||||||||||||||||||| |||  ||||| ||||| || ||||| |||    
T  7482 tcttactgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatctagg 7581  T
Q  227 atttttattcttgtgttttctatcaactatgcctcttcttcgttttgtttggatgaacttgttcacatcattcattgctacacgaca 313  Q
    |||||||||| |||||||||||||||||| ||| ||||    ||||| ||||| |||||||||||||| ||||||||||||| ||||    
T  7582 atttttattcctgtgttttctatcaactacgccacttcaaaattttgcttggacgaacttgttcacattattcattgctacaagaca 7668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1254 (Bit Score: 170; Significance: 3e-91; HSPs: 1)
Name: scaffold1254
Description:

Target: scaffold1254; HSP #1
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 27 - 264
Target Start/End: Complemental strand, 247 - 10
Alignment:
Q  27 cctcatcctcttcattttcctatgcattcacttaccaagtgttccttagttttaggggcactgacactcgatacggttttaccggcaatctctacaaggc 126  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  247 cctcttcctcttcattttcatatgcattcacttaccaagtgttccttagttttaggggcactgacactcgccacggttttaccggcaatctctacaaggc 148  T
Q  127 tcttactgacaagggaatccataccttcattgatgacaatgatcttcgaagaggagatgaaatcacaccagcacatctcaaagccattgatgaatccagg 226  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||| |||||||||||||||||||||| |||  ||||| ||||| || ||||| |||    
T  147 tcttactgacaagggaatcaaaaccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatctagg 48  T
Q  227 atttttattcttgtgttttctatcaactatgcctcttc 264  Q
    |||||||||| |||||||||||||||||| ||| ||||    
T  47 atttttattcctgtgttttctatcaactacgccacttc 10  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 148; Significance: 4e-78; HSPs: 10)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 26 - 313
Target Start/End: Complemental strand, 18699718 - 18699431
Alignment:
Q  26 tcctcatcctcttcattttcctatgcattcacttaccaagtgttccttagttttaggggcactgacactcgatacggttttaccggcaatctctacaagg 125  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||| || || |||||||||||||||||  |||||||||| ||| |||||||||| |    
T  18699718 tcctcatcctcttcattttcctatcgattcacttaccaagtgttcctcagcttcaggggcactgacactcgtgacggttttactggccatctctacaaag 18699619  T
Q  126 ctcttactgacaagggaatccataccttcattgatgacaatgatcttcgaagaggagatgaaatcacaccagcacatctcaaagccattgatgaatccag 225  Q
    |||||||||||||||||||||| |||||||||||||||  ||| || | ||| || |||||||||| |||| |||    ||| |||||||| || || ||    
T  18699618 ctcttactgacaagggaatccacaccttcattgatgaccgtgacctgcaaagtggggatgaaatcaaaccatcactcgacaatgccattgaagagtctag 18699519  T
Q  226 gatttttattcttgtgttttctatcaactatgcctcttcttcgttttgtttggatgaacttgttcacatcattcattgctacacgaca 313  Q
    ||| || |||| |||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||||||| ||||    
T  18699518 gatcttcattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgttcacatcattcactgctacaagaca 18699431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 26 - 313
Target Start/End: Complemental strand, 18679885 - 18679598
Alignment:
Q  26 tcctcatcctcttcattttcctatgcattcacttaccaagtgttccttagttttaggggcactgacactcgatacggttttaccggcaatctctacaagg 125  Q
    ||||||| ||||||||||||||||  ||||||||||||||||||||| || || ||||||| |||||||||  |||||||||| ||  ||||||||||||    
T  18679885 tcctcattctcttcattttcctatcgattcacttaccaagtgttcctcagcttcaggggcagtgacactcgtaacggttttactggtcatctctacaagg 18679786  T
Q  126 ctcttactgacaagggaatccataccttcattgatgacaatgatcttcgaagaggagatgaaatcacaccagcacatctcaaagccattgatgaatccag 225  Q
    ||||||||||||| |||||||| |||||||||||||||  ||| || | |||||| |||||||||| |||| |||    ||| |||||||| || || ||    
T  18679785 ctcttactgacaaaggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattgaagagtctag 18679686  T
Q  226 gatttttattcttgtgttttctatcaactatgcctcttcttcgttttgtttggatgaacttgttcacatcattcattgctacacgaca 313  Q
    ||| || |||| |||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||| ||||||| ||||    
T  18679685 gatcttcattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagaca 18679598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 26 - 313
Target Start/End: Complemental strand, 18724403 - 18724116
Alignment:
Q  26 tcctcatcctcttcattttcctatgcattcacttaccaagtgttccttagttttaggggcactgacactcgatacggttttaccggcaatctctacaagg 125  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||| || || ||||||| |||||||||  |||||||||| ||  ||||||||||||    
T  18724403 tcctcatcctcttcattttcctatcgattcacttaccaagtgttcctcagcttcaggggcagtgacactcgtaacggttttactggtcatctctacaagg 18724304  T
Q  126 ctcttactgacaagggaatccataccttcattgatgacaatgatcttcgaagaggagatgaaatcacaccagcacatctcaaagccattgatgaatccag 225  Q
    |||||||||||||||||||||| |||||||||||||||  ||| || | |||||| |||||||||| |||| |||    ||| |||||||| || || ||    
T  18724303 ctcttactgacaagggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattgaagagtctag 18724204  T
Q  226 gatttttattcttgtgttttctatcaactatgcctcttcttcgttttgtttggatgaacttgttcacatcattcattgctacacgaca 313  Q
    ||| || |||| |||||||||||||||||||||||||||||| ||||||||| | |||||||| |||||||| || ||||||| ||||    
T  18724203 gatcttcattcctgtgttttctatcaactatgcctcttcttcattttgtttgaacgaacttgtccacatcatgcactgctacaagaca 18724116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 26 - 313
Target Start/End: Complemental strand, 18731822 - 18731535
Alignment:
Q  26 tcctcatcctcttcattttcctatgcattcacttaccaagtgttccttagttttaggggcactgacactcgatacggttttaccggcaatctctacaagg 125  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||| || || ||||||| |||||||||  |||||||||| ||| |||||||||  |    
T  18731822 tcctcatcctcttcattttcctatcgattcacttaccaagtgttcctcagcttcaggggcagtgacactcgtgacggttttactggccatctctacagag 18731723  T
Q  126 ctcttactgacaagggaatccataccttcattgatgacaatgatcttcgaagaggagatgaaatcacaccagcacatctcaaagccattgatgaatccag 225  Q
    |||||||||||||||||||||| |||||||||||||||  ||| || | |||||| |||||||||| |||| |||    ||| |||||||| || || ||    
T  18731722 ctcttactgacaagggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattgaagagtctag 18731623  T
Q  226 gatttttattcttgtgttttctatcaactatgcctcttcttcgttttgtttggatgaacttgttcacatcattcattgctacacgaca 313  Q
    ||| || |||| |||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||| || ||||||| ||||    
T  18731622 gatcttcattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcatgcactgctacaagaca 18731535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 26 - 313
Target Start/End: Complemental strand, 18655795 - 18655508
Alignment:
Q  26 tcctcatcctcttcattttcctatgcattcacttaccaagtgttccttagttttaggggcactgacactcgatacggttttaccggcaatctctacaagg 125  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||| || || ||||||| |||||||||  |||||||||| ||  |||||||||| |    
T  18655795 tcctcatcctcttcattttcctatcgattcacttaccaagtgttcctcagcttcaggggcagtgacactcgtaacggttttactgggcatctctacaaag 18655696  T
Q  126 ctcttactgacaagggaatccataccttcattgatgacaatgatcttcgaagaggagatgaaatcacaccagcacatctcaaagccattgatgaatccag 225  Q
    |||||||||||||||||||||| |||||||||||||||  ||| || | ||| || |||||||||| |||| |||    ||| |||||| | || || ||    
T  18655695 ctcttactgacaagggaatccacaccttcattgatgaccgtgagctgcaaagtggggatgaaatcaaaccatcactcgacaatgccattcaagagtctag 18655596  T
Q  226 gatttttattcttgtgttttctatcaactatgcctcttcttcgttttgtttggatgaacttgttcacatcattcattgctacacgaca 313  Q
    ||| ||||||| |||||||||||||||||||||||||||||| ||||||||||| |||||||| | ||||||||| ||||||| ||||    
T  18655595 gatctttattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccgcatcattcactgctacaagaca 18655508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 32 - 168
Target Start/End: Complemental strand, 17989362 - 17989226
Alignment:
Q  32 tcctcttcattttcctatgcattcacttaccaagtgttccttagttttaggggcactgacactcgatacggttttaccggcaatctctacaaggctctta 131  Q
    ||||||||||||||||||||||||| |||| | |||||||| | || || |||||| |||||||| |||||||| |||||||||||||  ||||||||||    
T  17989362 tcctcttcattttcctatgcattcagttacgatgtgttcctcatttgtaagggcaccgacactcggtacggtttcaccggcaatctcttgaaggctctta 17989263  T
Q  132 ctgacaagggaatccataccttcattgatgacaatga 168  Q
     |||||||||||| | |||||||  ||||||| ||||    
T  17989262 ttgacaagggaattcgtaccttccatgatgacgatga 17989226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 32 - 168
Target Start/End: Original strand, 18073627 - 18073763
Alignment:
Q  32 tcctcttcattttcctatgcattcacttaccaagtgttccttagttttaggggcactgacactcgatacggttttaccggcaatctctacaaggctctta 131  Q
    ||||||||||||||||||||||||| |||| | |||||||| | || || |||||| |||||||| |||||||| |||||||||||||  ||||||||||    
T  18073627 tcctcttcattttcctatgcattcagttacgatgtgttcctcatttgtaagggcaccgacactcggtacggtttcaccggcaatctcttgaaggctctta 18073726  T
Q  132 ctgacaagggaatccataccttcattgatgacaatga 168  Q
     |||||||||||| | |||||||  ||||||| ||||    
T  18073727 ttgacaagggaattcgtaccttccatgatgacgatga 18073763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 71 - 305
Target Start/End: Complemental strand, 5091240 - 5091006
Alignment:
Q  71 cttagttttaggggcactgacactcgatacggttttaccggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatc 170  Q
    ||||||||||| ||||| |||||||| ||||||||||| || ||||||||  | |||||   || ||||||||| || ||||||||||||||||  || |    
T  5091240 cttagttttagaggcaccgacactcgttacggttttactggaaatctctatgaagctctacgtgtcaagggaattcacaccttcattgatgacagagagc 5091141  T
Q  171 ttcgaagaggagatgaaatcacaccagcacatctcaaagccattgatgaatccaggatttttattcttgtgttttctatcaactatgcctcttcttcgtt 270  Q
    |||   |||||||  |||| |||||  ||| |||||| |||||| | ||||| | |||| | ||| | || || |||| | ||||||| |||||||||||    
T  5091140 ttcagcgaggagaccaaataacaccgtcacttctcaaggccattcaagaatctaagattgtcattatcgttttctctaaccactatgcttcttcttcgtt 5091041  T
Q  271 ttgtttggatgaacttgttcacatcattcattgct 305  Q
    |||||| ||||||||||| || || ||||| ||||    
T  5091040 ttgtttagatgaacttgtccatattattcactgct 5091006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 308
Target Start/End: Complemental strand, 17989185 - 17989089
Alignment:
Q  212 attgatgaatccaggatttttattcttgtgttttctatcaactatgcctcttcttcgttttgtttggatgaacttgttcacatcattcattgctaca 308  Q
    ||||| |||||||||||||| ||||   | ||||||  ||||||||| |||||||| | |||||||||   |||||| ||||||||||| |||||||    
T  17989185 attgaagaatccaggattttgattcccatattttctgccaactatgcatcttcttcatcttgtttggacacacttgtccacatcattcactgctaca 17989089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 308
Target Start/End: Original strand, 18073804 - 18073900
Alignment:
Q  212 attgatgaatccaggatttttattcttgtgttttctatcaactatgcctcttcttcgttttgtttggatgaacttgttcacatcattcattgctaca 308  Q
    ||||| |||||||||||||| ||||   | ||||||  ||||||||| |||||||| | |||||||||   |||||| ||||||||||| |||||||    
T  18073804 attgaagaatccaggattttgattcccatattttctgccaactatgcatcttcttcatcttgtttggacacacttgtccacatcattcactgctaca 18073900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 109; Significance: 8e-55; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 88 - 308
Target Start/End: Complemental strand, 268613 - 268393
Alignment:
Q  88 tgacactcgatacggttttaccggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcgaagaggagatgaa 187  Q
    |||||||||  | |||||||  ||| |||||||||||||||||||||||||||||||||| ||||||||||||||   ||| |||| |||||| ||||||    
T  268613 tgacactcgtgagggttttattggccatctctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcaaagaggggatgaa 268514  T
Q  188 atcacaccagcacatctcaaagccattgatgaatccaggatttttattcttgtgttttctatcaactatgcctcttcttcgttttgtttggatgaacttg 287  Q
    |||| |||| |||    ||| |||||||| || || ||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  268513 atcaaaccatcactcgacaatgccattgaagagtctaggatttttattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttg 268414  T
Q  288 ttcacatcattcattgctaca 308  Q
    | ||||||||||| |||||||    
T  268413 tccacatcattcactgctaca 268393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 26 - 313
Target Start/End: Complemental strand, 28164680 - 28164393
Alignment:
Q  26 tcctcatcctcttcattttcctatgcattcacttaccaagtgttccttagttttaggggcactgacactcgatacggttttaccggcaatctctacaagg 125  Q
    ||||| ||||||||| ||||||||| |||||| |||||||||||||| ||||||||||||| |||||||||  ||||||| || ||| ||||||| ||||    
T  28164680 tcctcttcctcttcaatttcctatggattcacataccaagtgttcctcagttttaggggcagtgacactcgtgacggtttcactggccatctctataagg 28164581  T
Q  126 ctcttactgacaagggaatccataccttcattgatgacaatgatcttcgaagaggagatgaaatcacaccagcacatctcaaagccattgatgaatccag 225  Q
    | |||   ||||||||||| || || |||||||||||   |||||||   |||||||| |||||||||||  ||    |||| ||||||||  ||||  |    
T  28164580 cccttgacgacaagggaattcacacattcattgatgattgtgatcttgagagaggagaagaaatcacaccgtcattcatcaaggccattgaaaaatcttg 28164481  T
Q  226 gatttttattcttgtgttttctatcaactatgcctcttcttcgttttgtttggatgaacttgttcacatcattcattgctacacgaca 313  Q
     |||||||||| |||||| ||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||| ||||||| ||||    
T  28164480 aatttttattcctgtgttatctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagaca 28164393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 32 - 313
Target Start/End: Complemental strand, 28127992 - 28127710
Alignment:
Q  32 tcctcttcattttcctatgcattcacttaccaagtgttccttagttttaggggcactgacactcgatacggttttaccggcaatctctacaaggctctta 131  Q
    ||||||||| ||||||||| |||||| |||||||||||||| || || ||||||| |||||||||  ||||||| || ||| ||||||||||||| |||     
T  28127992 tcctcttcaatttcctatggattcacataccaagtgttcctcagcttcaggggcagtgacactcgtgacggtttcactggccatctctacaaggcccttt 28127893  T
Q  132 ctgacaagggaatccataccttcattgatgacaatgatcttcgaagaggag-atgaaatcacaccagcacatctcaaagccattgatgaatccaggattt 230  Q
     ||||||||||||||| || |||||||||||   | |||||   ||||||| |  ||||||||||  ||| | | || |||||||| ||||| || ||||    
T  28127892 atgacaagggaatccacacattcattgatgattgtaatcttgagagaggagaaaaaaatcacaccgtcacttttaaaggccattgaagaatctagaattt 28127793  T
Q  231 ttattcttgtgttttctatcaactatgcctcttcttcgttttgtttggatgaacttgttcacatcattcattgctacacgaca 313  Q
    |||||| ||| ||||||| |||||||||||||||||| ||||||||||| |||||||| ||||||||||| ||||||| ||||    
T  28127792 ttattcctgtattttctaccaactatgcctcttcttcattttgtttggacgaacttgtgcacatcattcactgctacaagaca 28127710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 108; Significance: 3e-54; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 26 - 313
Target Start/End: Complemental strand, 29274101 - 29273814
Alignment:
Q  26 tcctcatcctcttcattttcctatgcattcacttaccaagtgttccttagttttaggggcactgacactcgatacggttttaccggcaatctctacaagg 125  Q
    ||||| ||||||||| | || |||| |||||||||||| || ||||| |  ||||| |||  |||||||||  |||||||||  ||| |||||||||||     
T  29274101 tcctcttcctcttcaatctcatatggattcacttaccaggtcttcctcaactttagaggcggtgacactcgtgacggttttattggccatctctacaaga 29274002  T
Q  126 ctcttactgacaagggaatccataccttcattgatgacaatgatcttcgaagaggagatgaaatcacaccagcacatctcaaagccattgatgaatccag 225  Q
    |||||||||||||||||||||| ||||||||||||||   ||| |||| |||||| |||||||||| | || |||    ||| | |||||| || || ||    
T  29274001 ctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcaaagaggggatgaaatcaaatcatcactcgacaatgtcattgaagagtctag 29273902  T
Q  226 gatttttattcttgtgttttctatcaactatgcctcttcttcgttttgtttggatgaacttgttcacatcattcattgctacacgaca 313  Q
     |||||||||| |||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||| ||||||| ||||    
T  29273901 aatttttattcctgtgttttctatcaactatgcctcttcttcattttgtttggacgaacttgtccacatcattcactgctacaagaca 29273814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 47 - 196
Target Start/End: Original strand, 31903728 - 31903877
Alignment:
Q  47 tatgcattcacttaccaagtgttccttagttttaggggcactgacactcgatacggttttaccggcaatctctacaaggctcttactgacaagggaatcc 146  Q
    |||| |||||| ||| | |||||||| || ||||| |||   |||||||| || |||||||| || ||||||||||| ||||||  ||| ||||||||||    
T  31903728 tatggattcacctacgatgtgttcctcagctttagaggcttagacactcgctatggttttactggaaatctctacaaagctctttatgataagggaatcc 31903827  T
Q  147 ataccttcattgatgacaatgatcttcgaagaggagatgaaatcacacca 196  Q
    | ||||| ||||| ||  | || |||| ||||||| ||||||||||||||    
T  31903828 acacctttattgacgatgaagaacttcaaagaggacatgaaatcacacca 31903877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 91; Significance: 5e-44; HSPs: 4)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 35 - 305
Target Start/End: Original strand, 34590 - 34860
Alignment:
Q  35 tcttcattttcctatgcattcacttaccaagtgttccttagttttaggggcactgacactcgatacggttttaccggcaatctctacaaggctcttactg 134  Q
    ||||| || ||||||| |||||| ||  | ||||||||||||||||| || | ||||||||| || ||||||||||  |||||||| |  ||||||  |     
T  34590 tcttctttctcctatggattcacctatgacgtgttccttagttttagaggtagtgacactcgctatggttttaccgaaaatctctatagagctctttgtc 34689  T
Q  135 acaagggaatccataccttcattgatgacaatgatcttcgaagaggagatgaaatcacaccagcacatctcaaagccattgatgaatccaggatttttat 234  Q
    ||||||||||||| ||||||||||||||||  || |||| | ||||||||||||| |||||| ||| | |||| |||||||| || || |||||||| ||    
T  34690 acaagggaatccacaccttcattgatgacagggagcttcaaggaggagatgaaataacaccatcacttttcaaggccattgaagagtctaggattttcat 34789  T
Q  235 tcttgtgttttctatcaactatgcctcttcttcgttttgtttggatgaacttgttcacatcattcattgct 305  Q
    || ||| || |||||||| ||||| |||||||| ||||| ||||| |||||||| ||||||||||| ||||    
T  34790 tcctgtcttgtctatcaattatgcttcttcttcattttgcttggacgaacttgtccacatcattcactgct 34860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 32 - 305
Target Start/End: Original strand, 116658 - 116931
Alignment:
Q  32 tcctcttcattttcctatgcattcacttaccaagtgttccttagttttaggggcactgacactcgatacggttttaccggcaatctctacaaggctctta 131  Q
    |||||||| |||||||||| |||||| ||  | ||||||||||||||||| || | ||||||||| || |||||||| || ||||||||||| | ||||     
T  116658 tcctcttccttttcctatggattcacctatgacgtgttccttagttttagaggtagtgacactcgttatggttttactggaaatctctacaaagatcttt 116757  T
Q  132 ctgacaagggaatccataccttcattgatgacaatgatcttcgaagaggagatgaaatcacaccagcacatctcaaagccattgatgaatccaggatttt 231  Q
     |   ||| |||| | |||||||||||||||||| || |||| | |||| || ||||| |||||  ||| | |||| |||||||| || || ||||||||    
T  116758 gtaggaagagaattcgtaccttcattgatgacaaagaccttcaacgaggtgacgaaataacaccgtcacttttcaaggccattgaagagtctaggatttt 116857  T
Q  232 tattcttgtgttttctatcaactatgcctcttcttcgttttgtttggatgaacttgttcacatcattcattgct 305  Q
     |||| | | || |||||||| ||||| |||||||| ||||| |||||||||||||| ||||| ||||| ||||    
T  116858 cattcctattttgtctatcaattatgcttcttcttccttttgcttggatgaacttgtccacattattcactgct 116931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 68 - 305
Target Start/End: Original strand, 42864 - 43101
Alignment:
Q  68 ttccttagttttaggggcactgacactcgatacggttttaccggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatg 167  Q
    |||||||||||||| || | ||||||||| || |||||||| || ||||||||||| | ||||  | | |||||||| |  ||||||||||||||||  |    
T  42864 ttccttagttttagaggtagtgacactcgttatggttttactggaaatctctacaaagatctttgtaagaagggaattcgcaccttcattgatgacagag 42963  T
Q  168 atcttcgaagaggagatgaaatcacaccagcacatctcaaagccattgatgaatccaggatttttattcttgtgttttctatcaactatgcctcttcttc 267  Q
    | |||| | |||| ||  |||| |||||| ||| | |||| |||||||| || || |||||||| |||| ||| || |||||||| ||||| ||||||||    
T  42964 aacttccaggaggtgacaaaataacaccatcacttttcaaggccattgaagagtctaggattttcattcctgtcttgtctatcaattatgcttcttcttc 43063  T
Q  268 gttttgtttggatgaacttgttcacatcattcattgct 305  Q
     ||||| ||||| |||||||| ||||||||||| ||||    
T  43064 attttgcttggacgaacttgtccacatcattcactgct 43101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 65 - 305
Target Start/End: Original strand, 27343 - 27583
Alignment:
Q  65 gtgttccttagttttaggggcactgacactcgatacggttttaccggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgaca 164  Q
    ||||||||||||||||| || | ||||||||| || |||||||| || ||||||||||  | ||||  | | |||||||| || || ||| ||||||| |    
T  27343 gtgttccttagttttagaggtattgacactcgttatggttttactggaaatctctacagtgatctttgtaagaagggaattcacacattctttgatgata 27442  T
Q  165 atgatcttcgaagaggagatgaaatcacaccagcacatctcaaagccattgatgaatccaggatttttattcttgtgttttctatcaactatgcctcttc 264  Q
      || |||| | |||| |||||||| ||| || ||| | |||| | |||||| ||||| |||||||| |||| ||| || |||||||| ||||| |||||    
T  27443 gagagcttcaaggaggtgatgaaataacatcatcacttttcaaggtcattgaagaatctaggattttcattcctgtcttgtctatcaattatgcttcttc 27542  T
Q  265 ttcgttttgtttggatgaacttgttcacatcattcattgct 305  Q
    ||| ||||| ||||| |||||||| ||||||||||||||||    
T  27543 ttcattttgcttggacgaacttgtccacatcattcattgct 27583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 74; Significance: 6e-34; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 32 - 305
Target Start/End: Complemental strand, 58607 - 58334
Alignment:
Q  32 tcctcttcattttcctatgcattcacttaccaagtgttccttagttttaggggcactgacactcgatacggttttaccggcaatctctacaaggctctta 131  Q
    |||||||| || ||||||| |||||| || || ||||||||||| ||||| ||   ||||||||| || |||||||| || ||||||||||  ||||||     
T  58607 tcctcttccttctcctatggattcacctatcacgtgttccttagctttagaggttgtgacactcgctatggttttactggaaatctctacagagctcttt 58508  T
Q  132 ctgacaagggaatccataccttcattgatgacaatgatcttcgaagaggagatgaaatcacaccagcacatctcaaagccattgatgaatccaggatttt 231  Q
     ||||||||||||||  |||||||| |||||||  || |||| | |||| || ||||| |||||| ||| | |||| |||||| | || || ||||||||    
T  58507 gtgacaagggaatccgaaccttcatggatgacagagagcttcaaggaggtgacgaaataacaccatcacttttcaaggccattaaagagtctaggatttt 58408  T
Q  232 tattcttgtgttttctatcaactatgcctcttcttcgttttgtttggatgaacttgttcacatcattcattgct 305  Q
     ||||  || || |||||||||||||| |||||||| ||||| ||| | |||||||| ||||||||||| ||||    
T  58407 cattcccgtcttgtctatcaactatgcttcttcttcattttgcttgaacgaacttgtccacatcattcactgct 58334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 32 - 168
Target Start/End: Original strand, 59435 - 59571
Alignment:
Q  32 tcctcttcattttcctatgcattcacttaccaagtgttccttagttttaggggcactgacactcgatacggttttaccggcaatctctacaaggctctta 131  Q
    ||||||||||||||||||||||||| |||| | |||||||| | || || |||||| |||||||| |||||||| |||||||||||||  ||||||||||    
T  59435 tcctcttcattttcctatgcattcagttacgatgtgttcctcatttgtaagggcaccgacactcggtacggtttcaccggcaatctcttgaaggctctta 59534  T
Q  132 ctgacaagggaatccataccttcattgatgacaatga 168  Q
     |||||||||||| | |||||||  ||||||| ||||    
T  59535 ttgacaagggaattcgtaccttccatgatgacgatga 59571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 308
Target Start/End: Original strand, 59612 - 59708
Alignment:
Q  212 attgatgaatccaggatttttattcttgtgttttctatcaactatgcctcttcttcgttttgtttggatgaacttgttcacatcattcattgctaca 308  Q
    ||||| |||||||||||||| ||||   | ||||||  ||||||||| |||||||| | |||||||||   |||||| ||||||||||| |||||||    
T  59612 attgaagaatccaggattttgattcccatattttctgccaactatgcatcttcttcatcttgtttggacacacttgtccacatcattcactgctaca 59708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 56; Significance: 3e-23; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 74 - 305
Target Start/End: Original strand, 3279592 - 3279823
Alignment:
Q  74 agttttaggggcactgacactcgatacggttttaccggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttc 173  Q
    ||||||||||||||||||||||| || |||||||| || |||||||| |  ||| | | ||||   ||| ||   |||||||||||||| |  || ||||    
T  3279592 agttttaggggcactgacactcgctatggttttactggaaatctctatagagctttaagtgacggtggattctgcaccttcattgatgatagggagcttc 3279691  T
Q  174 gaagaggagatgaaatcacaccagcacatctcaaagccattgatgaatccaggatttttattcttgtgttttctatcaactatgcctcttcttcgttttg 273  Q
       |||| ||||||||||||| | ||| | |||| ||||| || || |||| |||||||||||  || || |||||||||||||| ||||||   |||||    
T  3279692 atggaggtgatgaaatcacacaatcacttgtcaaggccatcgaagagtccatgatttttattccggtcttctctatcaactatgcttcttctatattttg 3279791  T
Q  274 tttggatgaacttgttcacatcattcattgct 305  Q
    |||||| |||||||| ||||||||||||||||    
T  3279792 tttggacgaacttgtccacatcattcattgct 3279823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 65 - 195
Target Start/End: Complemental strand, 17993976 - 17993846
Alignment:
Q  65 gtgttccttagttttaggggcactgacactcgatacggttttaccggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgaca 164  Q
    |||||| ||||||| ||||| || || |||||||| ||||| ||||| |||||||| || |||||| ||||||||||||| |  |||||||| |||||||    
T  17993976 gtgttcattagtttcaggggtaccgatactcgatatggtttcaccggtaatctctataaagctctttctgacaagggaattcgaaccttcatcgatgaca 17993877  T
Q  165 atgatcttcgaagaggagatgaaatcacacc 195  Q
    | || ||||  ||||| ||||||||||||||    
T  17993876 aagagcttcagagaggtgatgaaatcacacc 17993846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 305
Target Start/End: Complemental strand, 17993789 - 17993736
Alignment:
Q  252 actatgcctcttcttcgttttgtttggatgaacttgttcacatcattcattgct 305  Q
    ||||||| |||||||| |||||||| || |||||||| ||||||||||| ||||    
T  17993789 actatgcttcttcttcattttgtttagacgaacttgtccacatcattcaatgct 17993736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 103 - 298
Target Start/End: Original strand, 16688944 - 16689139
Alignment:
Q  103 ttttaccggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcgaagaggagatgaaatcacaccagcacat 202  Q
    |||||| || ||||| ||||| |||||   |||||||||||||| |  ||||||||||||||| || ||||  ||||| ||  ||||||||||| ||| |    
T  16688944 ttttactggtaatctgtacaaagctctatgtgacaagggaatccgtgtcttcattgatgacaaggaacttcagagaggtgacaaaatcacaccatcactt 16689043  T
Q  203 ctcaaagccattgatgaatccaggatttttattcttgtgttttctatcaactatgcctcttcttcgttttgtttggatgaacttgttcacatcatt 298  Q
     |||| || ||||| || || ||||||   || |  ||||||||||  |||||||| | ||| |||||||||||||||||||||||  ||||||||    
T  16689044 atcaaggcaattgaagactcaaggattgcaatccccgtgttttctaagaactatgcattttcctcgttttgtttggatgaacttgtcaacatcatt 16689139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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