View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14878_high_14 (Length: 266)
Name: NF14878_high_14
Description: NF14878
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14878_high_14 |
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Alignment Details
Target: chr6 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 17 - 250
Target Start/End: Original strand, 199384 - 199617
Alignment:
| Q |
17 |
agtaattaataagcaaaaacttatgctagtagatccatagttattataagtacatgtagtataatgattaatacatatatggaaggatcaacttatggta |
116 |
Q |
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| T |
199384 |
agtaattaataagcaaaaacttatgctagtagatccatagttattataagtacatgtagtataatgattaatacatatatggaaggatcaacttatggta |
199483 |
T |
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| Q |
117 |
gtagataatcataattaatatatagtaaataggaagaaaattacttaataatacggaggacgtggcggtggaggaccgggatgaccaggctgtggtggcg |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
199484 |
gtagataatcataattaatatatagtaaataggaagaaaattacttaataatacggaggacgtggcggtggaggaccgggatgaccaggctgtggtggcg |
199583 |
T |
|
| Q |
217 |
gtggagcaggatgagcatgaagtggtgtatgatg |
250 |
Q |
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|||||||||||||||||||||||||||||||||| |
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| T |
199584 |
gtggagcaggatgagcatgaagtggtgtatgatg |
199617 |
T |
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