View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14879_low_8 (Length: 338)

Name: NF14879_low_8
Description: NF14879
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14879_low_8
NF14879_low_8
[»] chr2 (24 HSPs)
chr2 (17-317)||(14475339-14475639)
chr2 (32-317)||(14507350-14507638)
chr2 (29-229)||(14513303-14513504)
chr2 (36-236)||(14521223-14521425)
chr2 (31-276)||(14495281-14495529)
chr2 (24-236)||(14480531-14480746)
chr2 (31-276)||(14153481-14153729)
chr2 (29-125)||(14530059-14530155)
chr2 (178-237)||(14158151-14158210)
chr2 (31-204)||(14147084-14147260)
chr2 (24-276)||(14502768-14503024)
chr2 (187-254)||(14512907-14512974)
chr2 (175-249)||(14161605-14161679)
chr2 (190-254)||(14520738-14520802)
chr2 (190-254)||(14552934-14552998)
chr2 (190-253)||(14543584-14543647)
chr2 (190-236)||(14567991-14568037)
chr2 (190-252)||(14850003-14850065)
chr2 (190-253)||(14529358-14529421)
chr2 (190-254)||(14547724-14547788)
chr2 (190-254)||(15008423-15008487)
chr2 (190-254)||(15020325-15020389)
chr2 (190-254)||(15024360-15024424)
chr2 (190-254)||(31969750-31969814)
[»] chr7 (2 HSPs)
chr7 (191-236)||(9810921-9810966)
chr7 (172-236)||(9809513-9809577)
[»] chr1 (1 HSPs)
chr1 (203-235)||(24741728-24741760)


Alignment Details
Target: chr2 (Bit Score: 297; Significance: 1e-167; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 297; E-Value: 1e-167
Query Start/End: Original strand, 17 - 317
Target Start/End: Original strand, 14475339 - 14475639
Alignment:
Q  17 ataacaaattatggctaaaatacctgaaaatctaatcatgatgtgcatgttttgtccatggtgtaagcaagattgagtttttcctcatacaactttaata 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14475339 ataacaaattatggctaaaatacctgaaaatctaatcatgatgtgcatgttttgtccatggtgtaagcaagattgagtttttcctcatacaactttaata 14475438  T
Q  117 gataagaagactccttaataccctttatacacgtatcaagaaacagcttctcagacactacaaatggacaagttaagcttgcattcttttttcgcaaacc 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14475439 gataagaagactccttaataccctttatacacgtatcaagaaacagcttctcagacactacaaatggacaagttaagcttgcattcttttttcgcaaacc 14475538  T
Q  217 tttcttcagaagatattgcaatacagaggcccttggaaggaccctcttttcgaaacttaaagaaaaaactgatggtcctttggcaagggcaagtgcatcc 316  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  14475539 tttcttcagaagatattgcaatacagaggcccttggaaggaccctcttttcaaaacttaaagaaaaaactgatggtcctttggcaagggcaagtgcatcc 14475638  T
Q  317 c 317  Q
    |    
T  14475639 c 14475639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 32 - 317
Target Start/End: Complemental strand, 14507638 - 14507350
Alignment:
Q  32 taaaatacctgaaaatctaatcatgatgtgcatgttttgtccatggtgtaagcaagattgagtttttcctcatacaactttaatagataagaagactcct 131  Q
    |||||||||||||||| | ||||||  ||||| |||||||| ||||||||  |||| ||||||||||||||||||| |||||| |||||||||||||| |    
T  14507638 taaaatacctgaaaatatgatcatggcgtgcaagttttgtctatggtgtatccaaggttgagtttttcctcatacagctttaacagataagaagactcgt 14507539  T
Q  132 t---aataccctttatacacgtatcaagaaacagcttctcagacactacaaatggacaagttaagcttgcattcttttttcgcaaacctttcttcagaag 228  Q
    |   || ||  |||||| || |||||||||||| |||||||| ||||| ||||||| |||||||||||||| || ||||||||| ||||||||| || ||    
T  14507538 tctcaaaacgttttataaacttatcaagaaacaacttctcaggcactataaatggagaagttaagcttgcagtcctttttcgcagacctttctttagcag 14507439  T
Q  229 atattgcaatacagaggcccttggaaggaccctcttttcgaaacttaaagaaaaaactgatggtcctttggcaagggcaagtgcatccc 317  Q
      ||||||  |  | ||||||||||| |  ||| ||||||||||||| |  ||||||||||||  ||  |||||||||||| |||||||    
T  14507438 gaattgcacaattggggcccttggaatggtccttttttcgaaacttataccaaaaactgatggatctaaggcaagggcaagagcatccc 14507350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 29 - 229
Target Start/End: Complemental strand, 14513504 - 14513303
Alignment:
Q  29 ggctaaaatacctgaaaatctaatcatgatgtgcatgttttgtccatggtgtaagcaagattgagtttttcctcatacaactttaatagataagaagact 128  Q
    ||||||||||||| |||||||||| ||||  ||||||||||||||  |||||| ||||| |||||||||||| ||||||||||||||||||| ||| |||    
T  14513504 ggctaaaataccttaaaatctaattatgacatgcatgttttgtcccaggtgtatgcaaggttgagtttttccacatacaactttaatagataggaatact 14513405  T
Q  129 cctt---aataccctttatacacgtatcaagaaacagcttctcagacactacaaatggacaagttaagcttgcattcttttttcgcaaacctttcttcag 225  Q
    ||||   |||||| || ||| || ||| | ||| || ||||||||||| |||||| ||||||||||||||||||||||| |||| ||||| ||| |||||    
T  14513404 ccttcttaatacctttgataaacatatgatgaa-caacttctcagacattacaaa-ggacaagttaagcttgcattcttatttctcaaacatttattcag 14513307  T
Q  226 aaga 229  Q
    ||||    
T  14513306 aaga 14513303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 36 - 236
Target Start/End: Complemental strand, 14521425 - 14521223
Alignment:
Q  36 atacctgaaaatctaatcatgatgtgcatgttttgtccatggtgtaagcaagattgagtttttcctcatacaactttaatagataagaagactcctt--- 132  Q
    |||||| ||||||||||  |||  | ||| |||||||| ||||||| ||||| |||||||||||||||||||||||||||||||| ||| |||||||       
T  14521425 ataccttaaaatctaattgtgacatacatattttgtccctggtgtatgcaaggttgagtttttcctcatacaactttaatagataggaatactccttctt 14521326  T
Q  133 aataccctttatacacgtatcaagaaacagcttctcagacactacaaatggacaagttaagcttgcattcttttttcgcaaacctttcttcagaagatat 232  Q
    |||||| || ||  || ||||| ||| || ||||||| ||| |||||| ||||||||||||||||||||||| |||| ||||||||| ||||||||| ||    
T  14521325 aatacctttgattaacatatcacgaa-caacttctcaaacattacaaaaggacaagttaagcttgcattcttatttctcaaacctttattcagaagaaat 14521227  T
Q  233 tgca 236  Q
    ||||    
T  14521226 tgca 14521223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 31 - 276
Target Start/End: Complemental strand, 14495529 - 14495281
Alignment:
Q  31 ctaaaatacctgaaaatctaatcatgatgtgcatgttttgtccatggtgtaagcaagattgagtttttcctcatacaactttaatagataagaagactc- 129  Q
    |||||| |||| |||| ||| |||||||   ||||| || ||| ||||||  ||||| |||||||||||||||||||||||||  ||||||||||||||     
T  14495529 ctaaaagacctaaaaacctagtcatgatactcatgtcttttccttggtgtgggcaagcttgagtttttcctcatacaactttataagataagaagactca 14495430  T
Q  130 --cttaataccctttatacacgtatcaagaaacagcttctcagacactacaaatggacaagttaagcttgcattcttttttcgcaaacctttcttcagaa 227  Q
      ||||| ||  |||||| || |||||||||||| ||| |||| |  ||  |||||| || |||||||||||||||| ||||||||||| || || ||||    
T  14495429 ttcttaaaacgttttataaacatatcaagaaacaacttttcagtccttaagaatggataaattaagcttgcattcttatttcgcaaaccattattgagaa 14495330  T
Q  228 gatattgcaatacagaggcccttggaaggaccctcttttcgaaacttaa 276  Q
    || ||||||  |||| ||||||||||| || ||| ||||| ||||||||    
T  14495329 gaaattgcacaacagtggcccttggaatgatccttttttccaaacttaa 14495281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 24 - 236
Target Start/End: Original strand, 14480531 - 14480746
Alignment:
Q  24 attatggctaaaatacctgaaaatctaatcatgatgtgcatgttttgtccatggtgtaagcaagattgagtttttcctcatacaactttaatagataaga 123  Q
    |||| ||||||||||| |||||||||||||||||  |||| ||||||||| | ||||| |||||||||||||| ||||| |||| |||||| | || |||    
T  14480531 attaaggctaaaatacttgaaaatctaatcatgacatgcaagttttgtccctagtgtatgcaagattgagtttgtcctcgtacagctttaacatattaga 14480630  T
Q  124 agactc---cttaataccctttatacacgtatcaagaaacagcttctcagacactacaaatggacaagttaagcttgcattcttttttcgcaaacctttc 220  Q
    || |||   || || |   |||||| || |||||||||||  ||||||||  || ||||||||| |||||||||||||| |||| |||| |||||||||     
T  14480631 agcctcattctcaaaatgttttataaacctatcaagaaacctcttctcagtaacaacaaatggataagttaagcttgcactcttatttctcaaaccttta 14480730  T
Q  221 ttcagaagatattgca 236  Q
     |||||||||||||||    
T  14480731 ctcagaagatattgca 14480746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 31 - 276
Target Start/End: Complemental strand, 14153729 - 14153481
Alignment:
Q  31 ctaaaatacctgaaaatctaatcatgatgtgcatgttttgtccatggtgtaagcaagattgagtttttcctcatacaactttaatagataagaagactcc 130  Q
    |||||| || |||||| ||||||||||  || |||| |||||| |||| ||  | ||||||  ||||||||||||||||||||| |||||||||| |||     
T  14153729 ctaaaagacatgaaaaactaatcatgacatgaatgtcttgtccctggtctatcctagattgcatttttcctcatacaactttaaaagataagaagcctca 14153630  T
Q  131 tt---aataccctttatacacgtatcaagaaacagcttctcagacactacaaatggacaagttaagcttgcattcttttttcgcaaacctttcttcagaa 227  Q
    ||   || ||  |||||| || ||| |||||||| ||| |||| ||| ||||||||| ||||||||||||||||||| | |  ||||||||| || ||||    
T  14153629 ttctcaaaacgttttataaacatattaagaaacaacttatcagtcaccacaaatggataagttaagcttgcattcttatctgtcaaacctttgttgagaa 14153530  T
Q  228 gatattgcaatacagaggcccttggaaggaccctcttttcgaaacttaa 276  Q
    || |||| |  |||| |||||| |||| || ||| ||||| ||||||||    
T  14153529 gaaattggacaacagcggccctcggaatgatccttttttccaaacttaa 14153481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 29 - 125
Target Start/End: Complemental strand, 14530155 - 14530059
Alignment:
Q  29 ggctaaaatacctgaaaatctaatcatgatgtgcatgttttgtccatggtgtaagcaagattgagtttttcctcatacaactttaatagataagaag 125  Q
    ||||||||||||||||||| |||||||||  ||||||||| |||| |||||||  || ||||| |||||| ||||||||||||||| ||||||||||    
T  14530155 ggctaaaatacctgaaaatataatcatgacatgcatgtttagtccgtggtgtatacatgattgtgttttttctcatacaactttaaaagataagaag 14530059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 178 - 237
Target Start/End: Original strand, 14158151 - 14158210
Alignment:
Q  178 aaatggacaagttaagcttgcattcttttttcgcaaacctttcttcagaagatattgcaa 237  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14158151 aaatggagcagttaagcttgcattcttttttcgcaaacctttcttcagaagatattgcaa 14158210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 31 - 204
Target Start/End: Complemental strand, 14147260 - 14147084
Alignment:
Q  31 ctaaaatacctgaaaatctaatcatgatgtgcatgttttgtccatggtgtaagcaagattgagtttttcctcatacaactttaatagataagaagactc- 129  Q
    |||||| || |||||| ||||||||||  ||||||| |||||| || | ||  | |||||| |||||||||||||||||||||| |||||||||| |||     
T  14147260 ctaaaagacatgaaaacctaatcatgacatgcatgtcttgtccctgatctatcctagattgcgtttttcctcatacaactttaaaagataagaagcctca 14147161  T
Q  130 --cttaataccctttatacacgtatcaagaaacagcttctcagacactacaaatggacaagttaagcttgcattctt 204  Q
      || || ||  |||||| || ||  |||||||| ||| |||| ||| ||||||||| |||||||||||||||||||    
T  14147160 ttctcaaaacgttttataaacatactaagaaacaacttatcagtcacgacaaatggataagttaagcttgcattctt 14147084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 24 - 276
Target Start/End: Complemental strand, 14503024 - 14502768
Alignment:
Q  24 attatggctaaaatacctgaaaa-tctaatcatgatgtgcatgttttgtccatggtgtaagcaagattgagtttttcctcatacaactttaatagataag 122  Q
    |||| |||||||||||||||||| ||| ||||| |   |||  |||||| | ||||||  ||||||||||||||||| || |||| |||||| |||||||    
T  14503024 attaaggctaaaatacctgaaaaatctgatcattacacgcaatttttgttcttggtgtgtgcaagattgagtttttcttcgtacagctttaaaagataag 14502925  T
Q  123 aagactcctt---aataccctttatacacgtatcaagaaacagcttctcagacactacaaatggacaagttaagcttgcattcttttttcgcaaaccttt 219  Q
    ||| | | ||   || ||  |||||| || |||||||||||| |||||||| || ||  |||||| || |||||||||||||||| ||||||||||| ||    
T  14502924 aagccgcattctcaaaacgttttataaacatatcaagaaacaacttctcaggcattaagaatggataaattaagcttgcattcttatttcgcaaaccatt 14502825  T
Q  220 cttcagaagatattgcaatacagaggcccttggaaggaccctcttttcgaaacttaa 276  Q
      | || ||| ||||||  |||| ||| ||||||| || ||| ||||| ||||||||    
T  14502824 actaaggagaaattgcacgacagtggctcttggaatgatccttttttccaaacttaa 14502768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 187 - 254
Target Start/End: Complemental strand, 14512974 - 14512907
Alignment:
Q  187 agttaagcttgcattcttttttcgcaaacctttcttcagaagatattgcaatacagaggcccttggaa 254  Q
    |||||||||||||||||||||||||||||||||| ||| |||| ||||||| || |||||||||||||    
T  14512974 agttaagcttgcattcttttttcgcaaacctttcatcaaaagaaattgcaaaactgaggcccttggaa 14512907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 175 - 249
Target Start/End: Original strand, 14161605 - 14161679
Alignment:
Q  175 tacaaatggacaagttaagcttgcattcttttttcgcaaacctttcttcagaagatattgcaatacagaggccct 249  Q
    ||||||||||  ||||||||||||||||||||| |||||||||||||| |||||||||||||  || ||||||||    
T  14161605 tacaaatggagtagttaagcttgcattctttttccgcaaacctttctttagaagatattgcacaactgaggccct 14161679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 190 - 254
Target Start/End: Complemental strand, 14520802 - 14520738
Alignment:
Q  190 taagcttgcattcttttttcgcaaacctttcttcagaagatattgcaatacagaggcccttggaa 254  Q
    ||||||||||||||||||||||||||||||| ||| |||| ||||||| || |||||||||||||    
T  14520802 taagcttgcattcttttttcgcaaacctttcatcaaaagaaattgcaaaactgaggcccttggaa 14520738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 190 - 254
Target Start/End: Complemental strand, 14552998 - 14552934
Alignment:
Q  190 taagcttgcattcttttttcgcaaacctttcttcagaagatattgcaatacagaggcccttggaa 254  Q
    |||||||||||||||||| | |||||||||| ||| |||||||||||| || |||||||||||||    
T  14552998 taagcttgcattctttttcctcaaacctttcatcacaagatattgcaaaactgaggcccttggaa 14552934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 190 - 253
Target Start/End: Complemental strand, 14543647 - 14543584
Alignment:
Q  190 taagcttgcattcttttttcgcaaacctttcttcagaagatattgcaatacagaggcccttgga 253  Q
    ||||||||||||||||| ||||||||||||| | | |||| ||||||| || ||||||||||||    
T  14543647 taagcttgcattcttttctcgcaaacctttcattaaaagaaattgcaaaactgaggcccttgga 14543584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 236
Target Start/End: Complemental strand, 14568037 - 14567991
Alignment:
Q  190 taagcttgcattcttttttcgcaaacctttcttcagaagatattgca 236  Q
    ||||||||||||||||||||||||||||||| ||| |||| ||||||    
T  14568037 taagcttgcattcttttttcgcaaacctttcatcaaaagaaattgca 14567991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 252
Target Start/End: Original strand, 14850003 - 14850065
Alignment:
Q  190 taagcttgcattcttttttcgcaaacctttcttcagaagatattgcaatacagaggcccttgg 252  Q
    |||||| |||||||||||||||||||||||| ||| |||| ||||||  || |||||||||||    
T  14850003 taagctcgcattcttttttcgcaaacctttcatcaaaagaaattgcataactgaggcccttgg 14850065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 190 - 253
Target Start/End: Complemental strand, 14529421 - 14529358
Alignment:
Q  190 taagcttgcattcttttttcgcaaacctttcttcagaagatattgcaatacagaggcccttgga 253  Q
    |||||| |||||||||||| ||||||||||| | | |||| ||||||| || ||||||||||||    
T  14529421 taagctagcattctttttttgcaaacctttcattaaaagaaattgcaaaactgaggcccttgga 14529358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 254
Target Start/End: Complemental strand, 14547788 - 14547724
Alignment:
Q  190 taagcttgcattcttttttcgcaaacctttcttcagaagatattgcaatacagaggcccttggaa 254  Q
    ||||||| ||||||| | | ||||||||||| ||| |||| ||||||| || |||||||||||||    
T  14547788 taagctttcattcttatcttgcaaacctttcatcaaaagaaattgcaaaactgaggcccttggaa 14547724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 254
Target Start/End: Complemental strand, 15008487 - 15008423
Alignment:
Q  190 taagcttgcattcttttttcgcaaacctttcttcagaagatattgcaatacagaggcccttggaa 254  Q
    ||||||||||||||||| ||||||||||||| | |  ||| ||||||| || || ||||||||||    
T  15008487 taagcttgcattcttttctcgcaaacctttcataaatagaaattgcaaaactgatgcccttggaa 15008423  T

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Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 254
Target Start/End: Complemental strand, 15020389 - 15020325
Alignment:
Q  190 taagcttgcattcttttttcgcaaacctttcttcagaagatattgcaatacagaggcccttggaa 254  Q
    |||||| || ||||| ||||||||||||||| ||| |||| ||||||| || ||||| |||||||    
T  15020389 taagctcgccttcttctttcgcaaacctttcatcaaaagaaattgcaaaactgaggctcttggaa 15020325  T

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Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 254
Target Start/End: Complemental strand, 15024424 - 15024360
Alignment:
Q  190 taagcttgcattcttttttcgcaaacctttcttcagaagatattgcaatacagaggcccttggaa 254  Q
    ||||||||||||||||| ||||||||||||  ||| |||| ||||| | || ||||| |||||||    
T  15024424 taagcttgcattcttttgtcgcaaaccttttatcaaaagaaattgccaaactgaggctcttggaa 15024360  T

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Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 254
Target Start/End: Complemental strand, 31969814 - 31969750
Alignment:
Q  190 taagcttgcattcttttttcgcaaacctttcttcagaagatattgcaatacagaggcccttggaa 254  Q
    |||||| || ||||| ||||||||||||||| ||| |||| ||||||| || ||||| |||||||    
T  31969814 taagctcgccttcttctttcgcaaacctttcatcaaaagaaattgcaaaaccgaggctcttggaa 31969750  T

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Target: chr7 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 191 - 236
Target Start/End: Complemental strand, 9810966 - 9810921
Alignment:
Q  191 aagcttgcattcttttttcgcaaacctttcttcagaagatattgca 236  Q
    |||||||||||||||||||||||||||||||| |||||||||||||    
T  9810966 aagcttgcattcttttttcgcaaacctttcttaagaagatattgca 9810921  T

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Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 172 - 236
Target Start/End: Complemental strand, 9809577 - 9809513
Alignment:
Q  172 cactacaaatggacaagttaagcttgcattcttttttcgcaaacctttcttcagaagatattgca 236  Q
    |||||||||||||   ||||| |||||||||||||| |||||||||||||| |||||||||||||    
T  9809577 cactacaaatggagttgttaaacttgcattctttttccgcaaacctttctttagaagatattgca 9809513  T

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Target: chr1 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 203 - 235
Target Start/End: Complemental strand, 24741760 - 24741728
Alignment:
Q  203 ttttttcgcaaacctttcttcagaagatattgc 235  Q
    |||||||||||||| ||||||||||||||||||    
T  24741760 ttttttcgcaaacccttcttcagaagatattgc 24741728  T

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