View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1487_low_10 (Length: 286)
Name: NF1487_low_10
Description: NF1487
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1487_low_10 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 263; Significance: 1e-147; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 263; E-Value: 1e-147
Query Start/End: Original strand, 16 - 286
Target Start/End: Complemental strand, 38411369 - 38411099
Alignment:
| Q |
16 |
attgtgactttgatagaggaaacttttctgtgtatttctattgttaatgtaccaactgcaacgctccatgttccaatttttgtcaactcataacctcttt |
115 |
Q |
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| T |
38411369 |
attgtgactttggtagaggaaacttttctgtgtatttctattgttaatgtaccaactgcaacgctccatgttccaatttttgtcaactcataaactcttt |
38411270 |
T |
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| Q |
116 |
aagtcaccgcatgacatatttgacttcttcgtttgttttcgcagtttgtgatcctaagagcctactcttcgtatttggaatgcaattagactacagtgat |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38411269 |
aagtcaccgcatgacatatttgacttcttcgtttgttttcgcagtttgtgatcctaagagcctactcttcgtatttggaatgcaattagactacagtgat |
38411170 |
T |
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| Q |
216 |
gctctgatcgggggaggcttcaatttcaagaatcctaatgcgacacaaacctgtggatgtggtaaatcatt |
286 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38411169 |
gctctgatcgggggaggcttcaatttcaagaatcctaatgcgacacaaacctgtggatgtggtaaatcatt |
38411099 |
T |
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