View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1487_low_4 (Length: 445)
Name: NF1487_low_4
Description: NF1487
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1487_low_4 |
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Alignment Details
Target: chr7 (Bit Score: 417; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 417; E-Value: 0
Query Start/End: Original strand, 7 - 439
Target Start/End: Original strand, 6705638 - 6706070
Alignment:
| Q |
7 |
gatattgaggataataattaggtcctaaagatggccttaaagaagaacaagattgtgataaagaagaagatggaacataagctgtagaagaaggcatatt |
106 |
Q |
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| T |
6705638 |
gatattgaggataataattaggtcctaaagatggccttaaagaagaacaagattgtgataaagaagaagatggaatataagatgtagaagaaggcatatt |
6705737 |
T |
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| Q |
107 |
aattgccattgagtgtggtaataatggaccaaatgcccagttatgtggtactagatgttgatgttgttgttgatgaccataggttggaccacttggcatt |
206 |
Q |
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| T |
6705738 |
aattgccattgagtgtggtaataatggaccaaatgcccagttatgtggtactagatgttgatgttgttgttgatgaccataggttggaccacttggcatt |
6705837 |
T |
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| Q |
207 |
gacatagatatggacaaggacgaagaagatgaggaagatgtcgtttgttcgaaaaacaaagaagaattaaaatttgagcaacctctggtcgatggttgct |
306 |
Q |
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| T |
6705838 |
gacatagatatggacaaggacgaagaagatgaggaagatgtcgtttgttcaaaaaacaaagaagaattaaaatttgagcaacctctggtcgatggttgct |
6705937 |
T |
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| Q |
307 |
ccaaattgggccgcgaagcagcccaatttgttggtaacaactcaagctccaacaagcctgaactgcttgttggagtctggttatgatcacgaccatgttt |
406 |
Q |
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| T |
6705938 |
ccaaattgggccgcgaagcagcccaatttgttggtaacaactcaagctccagcaagcctgaactgcttgttggagtctggttatgatcacgaccatgttt |
6706037 |
T |
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| Q |
407 |
cgtggttgtggtcacggccgtattacctatgct |
439 |
Q |
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| T |
6706038 |
cgtggttgtggtcacggccgtattacctatgct |
6706070 |
T |
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