View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14880_high_10 (Length: 237)
Name: NF14880_high_10
Description: NF14880
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14880_high_10 |
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Alignment Details
Target: chr5 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 40441072 - 40441278
Alignment:
| Q |
1 |
gagttttgggaatgcatgacaagaaatcattacaagtcttccttgatagtggtagcacccacaacttcttggacttggagacaactaagaaactatgttt |
100 |
Q |
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| T |
40441072 |
gagttttgggaatgcatgacaagaaatcattacaagtcttccttgatagtggtagcacccacaacttcttggacttggagacaactaagaaactatgttt |
40441171 |
T |
|
| Q |
101 |
taagttagaggttattactcctatgtaggttaccggaggggtagggtgtagtcaattaaatgctccctacatgtgtagtggttttcaccggtatcttcat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
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| T |
40441172 |
taagttagaggttattactcctatgtaggttaccggaggggtagggtgtagtcaattaaatgctccctacatgtgtagtggttttcactggtatcttcat |
40441271 |
T |
|
| Q |
201 |
caaattg |
207 |
Q |
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||||||| |
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| T |
40441272 |
caaattg |
40441278 |
T |
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