View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14880_high_7 (Length: 296)
Name: NF14880_high_7
Description: NF14880
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14880_high_7 |
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Alignment Details
Target: chr8 (Bit Score: 243; Significance: 1e-135; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 243; E-Value: 1e-135
Query Start/End: Original strand, 21 - 274
Target Start/End: Original strand, 43102872 - 43103126
Alignment:
| Q |
21 |
aaggcgatggcgagtgaaccggctgcaagttcaagttctcctaggtagcctaaaaacatcatggacaccatggaacgagagtagaaaataagagctgtta |
120 |
Q |
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| T |
43102872 |
aaggcgatggcgagtgaaccggctgcaagttcaagttctcctaggtagcctaaaaacatcatggacaccatggaacgagaatagaaaataagagctgtta |
43102971 |
T |
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| Q |
121 |
tggctattggaaaagcaagcatcattagggatttcatttcttccatgatggttgaaaaggaacatgtatttggtttggtgtagtcacttaccaaatgcac |
220 |
Q |
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| T |
43102972 |
tggctattggaaaagcaagcatcattagggatttcatttcttccatgatggttgaaaaggaacatgtatttggtttggtgtagtcacttaccaaatgcac |
43103071 |
T |
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| Q |
221 |
ttgctccatgattatgtttgtcttgttaggggaagaagac-aatatgattttaaa |
274 |
Q |
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| T |
43103072 |
ttgctccatgattatgtttgtcttgttaggggaagaagacaaatatgattttaaa |
43103126 |
T |
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