View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14881_low_12 (Length: 220)

Name: NF14881_low_12
Description: NF14881
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14881_low_12
NF14881_low_12
[»] chr4 (8 HSPs)
chr4 (1-220)||(21833775-21833994)
chr4 (66-187)||(1755035-1755156)
chr4 (66-171)||(641483-641588)
chr4 (38-179)||(3438082-3438223)
chr4 (66-220)||(55908119-55908273)
chr4 (38-220)||(1600930-1601112)
chr4 (110-168)||(53761306-53761364)
chr4 (66-179)||(547470-547583)
[»] chr3 (3 HSPs)
chr3 (32-220)||(51763837-51764025)
chr3 (3-144)||(514192-514333)
chr3 (5-162)||(13470184-13470341)
[»] chr6 (2 HSPs)
chr6 (2-220)||(6588720-6588941)
chr6 (125-163)||(6416576-6416614)
[»] chr5 (4 HSPs)
chr5 (66-220)||(28532268-28532422)
chr5 (66-187)||(32268029-32268150)
chr5 (66-113)||(41889049-41889096)
chr5 (75-180)||(41900966-41901071)
[»] chr1 (2 HSPs)
chr1 (66-220)||(19467896-19468050)
chr1 (66-163)||(17352198-17352295)
[»] chr7 (3 HSPs)
chr7 (12-220)||(10169527-10169735)
chr7 (12-220)||(10177052-10177260)
chr7 (1-160)||(10615079-10615238)
[»] chr2 (1 HSPs)
chr2 (66-157)||(1037118-1037209)
[»] chr8 (1 HSPs)
chr8 (120-180)||(27922699-27922759)


Alignment Details
Target: chr4 (Bit Score: 212; Significance: 1e-116; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 21833994 - 21833775
Alignment:
Q  1 ggacaacatgttgatcattcagaaacatgttatcttcaagatccaaatgttggacaccatgacctttggataacaaacaaaagattccatcataactata 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21833994 ggacaacatgttgatcattcagaaacatgttatcttcaagatccaaatgttggacaccatgacctttggataacaaacaaaagattccatcataactata 21833895  T
Q  101 gccggtgcaatttcgaaggacaagcctcgttaaaggaagaccttcccttgcaatagagtagagtaactcatccgagatatacaaagaacgcaaactaaga 200  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  21833894 gccggtgcattttcgaaggacaagcctcgttaaaggaagaccttcccttgcaatagagtagagtaactcatccaagatatacaaagaacgcaaactaaga 21833795  T
Q  201 caagtcaaacccttcaaact 220  Q
    ||||||||||||||||||||    
T  21833794 caagtcaaacccttcaaact 21833775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 66 - 187
Target Start/End: Original strand, 1755035 - 1755156
Alignment:
Q  66 ttggataacaaacaaaagattccatcataactatagccggtgcaatttcgaaggacaagcctcgttaaaggaagaccttcccttgcaatagagtagagta 165  Q
    ||||||||||||||   ||||||||||||||||||||||||||||| || ||| ||||||||| | |||||||||| || | ||||||||||||| || |    
T  1755035 ttggataacaaacatcggattccatcataactatagccggtgcaatgtccaagcacaagcctcttcaaaggaagacttttcattgcaatagagtacagca 1755134  T
Q  166 actcatccgagatatacaaaga 187  Q
     |||||||||||||| ||||||    
T  1755135 gctcatccgagatattcaaaga 1755156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 66 - 171
Target Start/End: Original strand, 641483 - 641588
Alignment:
Q  66 ttggataacaaacaaaagattccatcataactatagccggtgcaatttcgaaggacaagcctcgttaaaggaagaccttcccttgcaatagagtagagta 165  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||| |  |||||||| ||||| |||||||| |||| | ||||||||||| |||| |    
T  641483 ttggataacaaacacaagattccatcataagtatagccggtgcaattgcagaggacaagtctcgtcaaaggaaggcctttcattgcaatagaggagagaa 641582  T
Q  166 actcat 171  Q
    ||||||    
T  641583 actcat 641588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 38 - 179
Target Start/End: Complemental strand, 3438223 - 3438082
Alignment:
Q  38 aagatccaaatgttggacaccatgacctttggataacaaacaaaagattccatcataactatagccggtgcaatttcgaaggacaagcctcgttaaagga 137  Q
    ||||||||||||||| | ||  ||||  |||||||||| | |||||||| || ||||||||||||||||||||||  | |||||||||||  | ||||||    
T  3438223 aagatccaaatgttgtatacattgacacttggataacagagaaaagatttcagcataactatagccggtgcaattgtggaggacaagccttctcaaagga 3438124  T
Q  138 agaccttcccttgcaatagagtagagtaactcatccgagata 179  Q
    |||||| |  ||||||||||| | ||||| ||||||| ||||    
T  3438123 agacctccaattgcaatagaggaaagtaattcatccgggata 3438082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 66 - 220
Target Start/End: Complemental strand, 55908273 - 55908119
Alignment:
Q  66 ttggataacaaacaaaagattccatcataactatagccggtgcaatttcgaaggacaagcctcgttaaaggaagaccttcccttgcaatagagtagagta 165  Q
    |||||||||||| |  | |||||| ||||| ||||||||||||||||| | |||||||| ||  | |||||||||||| || ||||||||||  | || |    
T  55908273 ttggataacaaagagtatattccaacataattatagccggtgcaattttggaggacaagtcttctcaaaggaagacctcccattgcaatagaaaaaagca 55908174  T
Q  166 actcatccgagatatacaaagaacgcaaactaagacaagtcaaacccttcaaact 220  Q
    | |||||||||||   ||||||   |||| |||||||||| || || ||||||||    
T  55908173 attcatccgagatgcgcaaagacgacaaattaagacaagttaagccattcaaact 55908119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 220
Target Start/End: Original strand, 1600930 - 1601112
Alignment:
Q  38 aagatccaaatgttggacaccatgacctttggataacaaacaaaagattccatcataactatagccggtgcaatttcgaaggacaagcctcgttaaagga 137  Q
    |||| |||||||||||| ||  ||||  ||||||||||||| ||  | ||||  |||||||||||| ||| ||| |   ||| |||||||| | ||||||    
T  1600930 aagaaccaaatgttggatacgttgacacttggataacaaactaactactccaatataactatagccagtgaaatatgcgaggtcaagcctcctcaaagga 1601029  T
Q  138 agaccttcccttgcaatagagtagagtaactcatccgagatatacaaagaacgcaaactaagacaagtcaaacccttcaaact 220  Q
     ||  |||| ||||||||||| |||| |||| ||||||||||  | || |   |||   ||||||||||||||||||||||||    
T  1601030 ggattttcctttgcaatagaggagagcaactgatccgagatacgccaataggacaattcaagacaagtcaaacccttcaaact 1601112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 168
Target Start/End: Complemental strand, 53761364 - 53761306
Alignment:
Q  110 atttcgaaggacaagcctcgttaaaggaagaccttcccttgcaatagagtagagtaact 168  Q
    |||| |||||||||| || || |||||||||| |||| |||||||||||||||| ||||    
T  53761364 attttgaaggacaagacttgtcaaaggaagacattcctttgcaatagagtagagcaact 53761306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 66 - 179
Target Start/End: Original strand, 547470 - 547583
Alignment:
Q  66 ttggataacaaacaaaagattccatcataactatagccggtgcaatttcgaaggacaagcctcgttaaaggaagaccttcccttgcaatagagtagagta 165  Q
    ||||| || |||||| | |||||| ||||||||||||||   |||||| | ||||||||| |  | ||||||| | ||||| ||||||||||| |||| |    
T  547470 ttggacaaaaaacaagatattccagcataactatagccgaaacaattttggaggacaagctttctcaaaggaatagcttccattgcaatagaggagagca 547569  T
Q  166 actcatccgagata 179  Q
    ||  ||||||||||    
T  547570 acatatccgagata 547583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 65; Significance: 1e-28; HSPs: 3)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 32 - 220
Target Start/End: Complemental strand, 51764025 - 51763837
Alignment:
Q  32 atcttcaagatccaaatgttggacaccatgacctttggataacaaacaaaagattccatcataactatagccggtgcaatttcgaaggacaagcctcgtt 131  Q
    ||||| ||||||||||||||  | ||  ||||  ||||||| |||||||| ||||||| ||||||||||||| |||||| || |||||||||||||  |     
T  51764025 atcttgaagatccaaatgtttcaaacgttgacagttggataccaaacaaatgattccagcataactatagcccgtgcaaatttgaaggacaagccttttc 51763926  T
Q  132 aaaggaagaccttcccttgcaatagagtagagtaactcatccgagatatacaaagaacgcaaactaagacaagtcaaacccttcaaact 220  Q
    ||| ||||||||||||||||||| |||||||| |||||||| ||||| | ||||     ||||  |||| |||||||||||||||||||    
T  51763925 aaaagaagaccttcccttgcaatcgagtagagcaactcatcagagattttcaaacgcttcaaatcaagagaagtcaaacccttcaaact 51763837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 144
Target Start/End: Complemental strand, 514333 - 514192
Alignment:
Q  3 acaacatgttgatcattcagaaacatgttatcttcaagatccaaatgttggacaccatgacctttggataacaaacaaaagattccatcataactatagc 102  Q
    ||||||||||||||||| || || | |  ||||| ||||| ||||||||| |  |  | || ||||||||||||| |||||||||||||||| |  ||||    
T  514333 acaacatgttgatcattgaggaaaagggcatcttgaagattcaaatgttgtatccatttacatttggataacaaagaaaagattccatcatagccgtagc 514234  T
Q  103 cggtgcaatttcgaaggacaagcctcgttaaaggaagacctt 144  Q
    |||| ||| | || || ||||| ||| |||||||||||||||    
T  514233 cggtacaactacggagcacaagtctccttaaaggaagacctt 514192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 162
Target Start/End: Complemental strand, 13470341 - 13470184
Alignment:
Q  5 aacatgttgatcattcagaaacatgttatcttcaagatccaaatgttggacaccatgacctttggataacaaacaaaagattccatcataactatag--- 101  Q
    |||||||||||||||||||||||    |   |||||||| ||||||||||  || ||||  ||||||||||||| ||| |||||| ||||||||| |       
T  13470341 aacatgttgatcattcagaaacaa---aagctcaagatctaaatgttggatgccttgacacttggataacaaacgaaatattccagcataactatggggg 13470245  T
Q  102 ccggtgcaatttcgaaggacaagcctcgttaaaggaagaccttcccttgcaatagagtaga 162  Q
    ||    |||| ||| ||| ||| |||||| |||||||||||||||||||||||| ||||||    
T  13470244 ccaaaacaatgtcggagggcaaacctcgtcaaaggaagaccttcccttgcaatacagtaga 13470184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 64; Significance: 4e-28; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 2 - 220
Target Start/End: Complemental strand, 6588941 - 6588720
Alignment:
Q  2 gacaacatgttgatcattcagaaacatgttatcttcaagatccaaatgttggacacc---atgacctttggataacaaacaaaagattccatcataacta 98  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||||||||| ||    |||||   ||||||||||| |||||| ||||| ||||  |    
T  6588941 gacaacatgttgatcattcagaaacctattatcttcaagatccaaatgttggaaacttttatgacacatggataacaaataaaagagtccattataataa 6588842  T
Q  99 tagccggtgcaatttcgaaggacaagcctcgttaaaggaagaccttcccttgcaatagagtagagtaactcatccgagatatacaaagaacgcaaactaa 198  Q
      ||| |  |||| |   || ||||| || || |||||||||| || ||||||||||| |||||| |||||||| ||||||| ||||| |  ||||| ||    
T  6588841 cggccagaacaatatttgagtacaagtcttgtcaaaggaagacgtttccttgcaatagtgtagagcaactcatcggagatattcaaagcagacaaaccaa 6588742  T
Q  199 gacaagtcaaacccttcaaact 220  Q
    |||||||||||| |||||||||    
T  6588741 gacaagtcaaactcttcaaact 6588720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 163
Target Start/End: Original strand, 6416576 - 6416614
Alignment:
Q  125 cctcgttaaaggaagaccttcccttgcaatagagtagag 163  Q
    |||||| |||||||||||||||||||||||| |||||||    
T  6416576 cctcgtcaaaggaagaccttcccttgcaatacagtagag 6416614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 55; Significance: 9e-23; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 66 - 220
Target Start/End: Original strand, 28532268 - 28532422
Alignment:
Q  66 ttggataacaaacaaaagattccatcataactatagccggtgcaatttcgaaggacaagcctcgttaaaggaagaccttcccttgcaatagagtagagta 165  Q
    ||||||||||||||||||| ||| ||||||||||||||   || ||||   ||||||||| |  | |||||||||||| |||||||||||| |||||| |    
T  28532268 ttggataacaaacaaaagagtccgtcataactatagccccagcgattttttaggacaagctttatcaaaggaagacctccccttgcaatagtgtagagca 28532367  T
Q  166 actcatccgagatatacaaagaacgcaaactaagacaagtcaaacccttcaaact 220  Q
    ||||||| || ||||  ||| ||  ||||| |||||||||||||||||| |||||    
T  28532368 actcatcagaaatattaaaataatacaaaccaagacaagtcaaacccttgaaact 28532422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 66 - 187
Target Start/End: Original strand, 32268029 - 32268150
Alignment:
Q  66 ttggataacaaacaaaagattccatcataactatagccggtgcaatttcgaaggacaagcctcgttaaaggaagaccttcccttgcaatagagtagagta 165  Q
    |||||||  ||| ||| |||||||  ||| |||||||||||||||| | | || ||||||||||| |||||||||| ||    |||||||||| |||| |    
T  32268029 ttggatagtaaagaaaggattccagaatagctatagccggtgcaatcttggagaacaagcctcgtcaaaggaagacattggtatgcaatagaggagagca 32268128  T
Q  166 actcatccgagatatacaaaga 187  Q
    ||||||| ||||||| ||||||    
T  32268129 actcatctgagatattcaaaga 32268150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 66 - 113
Target Start/End: Complemental strand, 41889096 - 41889049
Alignment:
Q  66 ttggataacaaacaaaagattccatcataactatagccggtgcaattt 113  Q
    |||||||  ||||||||||||||| |||||||| ||||||||||||||    
T  41889096 ttggatagtaaacaaaagattccagcataactaaagccggtgcaattt 41889049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 75 - 180
Target Start/End: Complemental strand, 41901071 - 41900966
Alignment:
Q  75 aaacaaaagattccatcataactatagccggtgcaatttcgaaggacaagcctcgttaaaggaagaccttcccttgcaatagagtagagtaactcatccg 174  Q
    |||||||  ||||||  ||||||||| |||||||||||| | || |||||||| || ||||| |||||||   |||||||||||  ||| ||| |||| |    
T  41901071 aaacaaataattccagaataactataaccggtgcaattttggagaacaagcctagtcaaaggtagaccttggattgcaatagagatgagaaacacatctg 41900972  T
Q  175 agatat 180  Q
    ||||||    
T  41900971 agatat 41900966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 66 - 220
Target Start/End: Complemental strand, 19468050 - 19467896
Alignment:
Q  66 ttggataacaaacaaaagattccatcataactatagccggtgcaatttcgaaggacaagcctcgttaaaggaagaccttcccttgcaatagagtagagta 165  Q
    |||||||||||||||||||||||| |||| |||| |||   ||||| |   |||||||||||||| ||||| || ||||||| ||||||||||||||| |    
T  19468050 ttggataacaaacaaaagattccagcatagctatggccaaagcaatatttgaggacaagcctcgtcaaaggtagcccttcccgtgcaatagagtagagca 19467951  T
Q  166 actcatccgagatatacaaagaacgcaaactaagacaagtcaaacccttcaaact 220  Q
      ||||| ||||||| || | | | | || ||||| |||||||||||||||||||    
T  19467950 tttcatcagagatattcagaaaccaccaagtaagagaagtcaaacccttcaaact 19467896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 66 - 163
Target Start/End: Original strand, 17352198 - 17352295
Alignment:
Q  66 ttggataacaaacaaaagattccatcataactatagccggtgcaatttcgaaggacaagcctcgttaaaggaagaccttcccttgcaatagagtagag 163  Q
    |||||||||||| ||||  ||||| ||||||| ||||| ||| ||| | |||||||||| ||| | ||||||| ||| ||| ||||||||||| ||||    
T  17352198 ttggataacaaagaaaaagttccagcataactgtagccagtggaatattgaaggacaagtctcctgaaaggaaaaccctcctttgcaatagaggagag 17352295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 3e-19; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 12 - 220
Target Start/End: Complemental strand, 10169735 - 10169527
Alignment:
Q  12 tgatcattcagaaacatgttatcttcaagatccaaatgttggacaccatgacctttggataacaaacaaaagattccatcataactatagccggtgcaat 111  Q
    ||||||||||| || |||  || |||||||||||  ||||| | |||  |||  || ||| ||||||||||||||||| |||| || ||| |   |||||    
T  10169735 tgatcattcaggaaaatggcatgttcaagatccatgtgttgcaaacctcgacacttagatgacaaacaaaagattccagcatagctttagtccaagcaat 10169636  T
Q  112 ttcgaaggacaagcctcgttaaaggaagaccttcccttgcaatagagtagagtaactcatccgagatatacaaagaacgcaaactaagacaagtcaaacc 211  Q
     ||  ||| |||||||||| ||||| ||||||||||| |||||||||||||| |  ||||| ||||||| || ||| | ||||  |||| ||||||||||    
T  10169635 atctgagggcaagcctcgtcaaaggtagaccttccctcgcaatagagtagagcatttcatcagagatatccagagatctcaaagaaagagaagtcaaacc 10169536  T
Q  212 cttcaaact 220  Q
    |||||||||    
T  10169535 cttcaaact 10169527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 12 - 220
Target Start/End: Complemental strand, 10177260 - 10177052
Alignment:
Q  12 tgatcattcagaaacatgttatcttcaagatccaaatgttggacaccatgacctttggataacaaacaaaagattccatcataactatagccggtgcaat 111  Q
    ||||||||||| || |||  || |||||||||||  ||||| | |||  |||  || ||| ||||||||||||||||| |||| || ||| |   |||||    
T  10177260 tgatcattcaggaaaatggcatgttcaagatccatgtgttgcaaacctcgacacttagatgacaaacaaaagattccagcatagctttagtccaagcaat 10177161  T
Q  112 ttcgaaggacaagcctcgttaaaggaagaccttcccttgcaatagagtagagtaactcatccgagatatacaaagaacgcaaactaagacaagtcaaacc 211  Q
     ||  ||| |||||||||| ||||| ||||||||||| |||||||||||||| |  ||||| ||||||| || ||| | ||||  |||| ||||||||||    
T  10177160 atctgagggcaagcctcgtcaaaggtagaccttccctcgcaatagagtagagcatttcatcagagatatccagagatctcaaagaaagagaagtcaaacc 10177061  T
Q  212 cttcaaact 220  Q
    |||||||||    
T  10177060 cttcaaact 10177052  T

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Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 10615079 - 10615238
Alignment:
Q  1 ggacaacatgttgatcattcagaaacatgttatcttcaagatccaaatgttggacaccatgacctttggataacaaacaaaagattccatcataacta-- 98  Q
    ||||||||||||||||||||||||||     |  ||||||||||||||||||||  || ||||  |||||||| |||||| |||||||| ||||||||      
T  10615079 ggacaacatgttgatcattcagaaacgg---aagttcaagatccaaatgttggaagccttgacacttggataataaacaatagattccagcataactatg 10615175  T
Q  99 -tagccggtgcaatttcgaaggacaagcctcgttaaaggaagaccttcccttgcaatagagta 160  Q
     | ||||   |||| ||| |||  || |||||| |||||||||||  ||||||||||||||||    
T  10615176 gtggccgaaacaatgtcggagggtaaacctcgtcaaaggaagacccacccttgcaatagagta 10615238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 66 - 157
Target Start/End: Complemental strand, 1037209 - 1037118
Alignment:
Q  66 ttggataacaaacaaaagattccatcataactatagccggtgcaatttcgaaggacaagcctcgttaaaggaagaccttcccttgcaataga 157  Q
    |||||||||||| |  | |||||| ||||| |||||| |||||||||| | |||||||| ||  | |||||||||||| || ||||||||||    
T  1037209 ttggataacaaagagtatattccaacataattatagctggtgcaattttggaggacaagtcttctcaaaggaagacctcccattgcaataga 1037118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 180
Target Start/End: Original strand, 27922699 - 27922759
Alignment:
Q  120 acaagcctcgttaaaggaagaccttcccttgcaatagagtagagtaactcatccgagatat 180  Q
    ||||||||||| ||||| |||| |||  | ||||||||| |||| ||||||||||||||||    
T  27922699 acaagcctcgtcaaaggtagacgttcggtggcaatagaggagagcaactcatccgagatat 27922759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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