View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14881_low_4 (Length: 283)
Name: NF14881_low_4
Description: NF14881
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14881_low_4 |
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Alignment Details
Target: chr1 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 19 - 266
Target Start/End: Original strand, 15997887 - 15998134
Alignment:
| Q |
19 |
atatgcttatgatttgaactcaaacaggactacaagaaaattgcagcaaactgaataaaataaatctactaactataagaaataatgaattccagagtaa |
118 |
Q |
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| T |
15997887 |
atatgcttatgatttgaactcaaacaggactaccagaaaattgcagtaaactgaataaaataaatctactaactataagaaataatgaattacagagtaa |
15997986 |
T |
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| Q |
119 |
agacaatcatgtcattatttgaaacactaaaaacgaccactgcatgataaattcttttaaagttgatatagcagatcaagaatacaatgggaagaaagag |
218 |
Q |
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||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
15997987 |
agacaatcatgtcattatttgaaacgccaaaaacgaccactgcatgataaattcttttaaagttgatatagcagatcaagaatacaatgggaagaaagag |
15998086 |
T |
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| Q |
219 |
ggttattacttcaagacttgaaaaatcatagtgaccctactacattat |
266 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
15998087 |
ggttattacttcaagacttgaaaaatcatagtgaccctactacattat |
15998134 |
T |
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