View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14881_low_7 (Length: 240)
Name: NF14881_low_7
Description: NF14881
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14881_low_7 |
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Alignment Details
Target: chr3 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 12 - 221
Target Start/End: Complemental strand, 45110282 - 45110073
Alignment:
| Q |
12 |
gcatcatgtagaggacatgttcatgatttcaggaaatactatgaacataaaagacttttcagaacatgtaaacaaataattaggagatggtcgtatgatt |
111 |
Q |
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| T |
45110282 |
gcatcatgtagaggacatgttcatgatttcaggaaatactatgaacataaaagacttttcagaacatgtaaacaaataattaggagatggtagtatgatt |
45110183 |
T |
|
| Q |
112 |
atgataaaataaaaaagtcaaagttccaaagacaacagagtacctacatagtttaacaaacaaacaaacaaatgctaagaatcatagtttgttttgaaat |
211 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45110182 |
atgataaaataaaaaagtcaaagttccaaagacaacagagtacctacatagtttaacaaacaaacaaacaaatgctaagaatcatagtttgttttgaaat |
45110083 |
T |
|
| Q |
212 |
gagtcctaag |
221 |
Q |
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|||||||||| |
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| T |
45110082 |
gagtcctaag |
45110073 |
T |
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