View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14882_low_17 (Length: 295)
Name: NF14882_low_17
Description: NF14882
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14882_low_17 |
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Alignment Details
Target: chr4 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 22 - 275
Target Start/End: Original strand, 31929991 - 31930246
Alignment:
| Q |
22 |
agagaaaattcatgaagagtgtactagtgtgtattaattataagaaggaaaaaagacactagagtctcatatattggataatggagtattaatgtgtgtg |
121 |
Q |
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| T |
31929991 |
agagaaaattcatgaagagtgtaccagtgtgtattaattaaaagaaggaaaaaagacactagagtctgatatattggataatggagtattaatgtgtgtg |
31930090 |
T |
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| Q |
122 |
aattgacaaaacactaaagtggagtttacatacattggatatctttcactttcaatactatacaaagagtgttaaaccttttgtgt--agttcatcaaag |
219 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
31930091 |
aattgacaaaacactaaagtggagtttacatacattggatatctttcactttcaatactatacaaagagtgttaaaccttttgtgtaaagttcatcaaag |
31930190 |
T |
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| Q |
220 |
tttgacacattttttagctttgttttctccattttctactcgacccatgcattttt |
275 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31930191 |
tttgacacattttttagctttgttttctccattttctactcgacccatgcattttt |
31930246 |
T |
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