View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14883_low_4 (Length: 343)
Name: NF14883_low_4
Description: NF14883
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14883_low_4 |
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Alignment Details
Target: chr2 (Bit Score: 299; Significance: 1e-168; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 7 - 305
Target Start/End: Original strand, 1817643 - 1817941
Alignment:
| Q |
7 |
tttataaggtgcatttgaattgtatgttgacttttctttcagttcttaacatcaaattaagggggaaaaagttaaacatgtgctgtttttcactctctta |
106 |
Q |
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| T |
1817643 |
tttataaggtgcatttgaattgtatgttgacttttctttcagttcttaacatcaaattaagggggaaaaagttaaacatgtgctgtttttcactctctta |
1817742 |
T |
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| Q |
107 |
ttgtctgtcaatttgttacaggcaccggaaaatctcagtttctgaaattttctgcaaaattgagcaaccgatctgttattacaactgggttgggaagcac |
206 |
Q |
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| T |
1817743 |
ttgtctgtcaatttgttacaggcaccggaaaatctcagtttctgaaattttctgcaaaattgagcaaccgatctgttattacaactgggttgggaagcac |
1817842 |
T |
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| Q |
207 |
aagtgcaggattgactgttactgccgtgaaggacgggggtaatatgcacacagctttatttacagcataacagtttctttttccatcattcataacttt |
305 |
Q |
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| T |
1817843 |
aagtgcaggattgactgttactgccgtgaaggacgggggtaatatgcacacagctttatttacagcataacagtttctttttccatcattcataacttt |
1817941 |
T |
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