View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14885_high_22 (Length: 249)
Name: NF14885_high_22
Description: NF14885
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14885_high_22 |
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Alignment Details
Target: chr2 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 14 - 234
Target Start/End: Original strand, 41174345 - 41174565
Alignment:
| Q |
14 |
attatactcccatgatgaacaagtctttggtaaacaagatatgttattattaatattgcagcactcttcattctgtagactattctcttctgatagatca |
113 |
Q |
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| T |
41174345 |
attatactcccatgatgaagaagtctttggtaaacaagatatgttattattaatattgcagcactcttcattctgtagactattctcttctgatagatca |
41174444 |
T |
|
| Q |
114 |
atatctttccatatatcatccattgaaatttctttttcatgctcttctcctactagtttaacttgtgttgatgttgatgatcctcctgtgtcataaaaac |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41174445 |
atatctttccatatatcatccattgaaatttctttttcatgctcttctcctactagtttaacttgtgttgatgttgatgatcctcctgtgtcataaaaac |
41174544 |
T |
|
| Q |
214 |
tttcttctcctgcctctttgg |
234 |
Q |
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||||||||||||||||||||| |
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| T |
41174545 |
tttcttctcctgcctctttgg |
41174565 |
T |
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