View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14885_high_9 (Length: 413)
Name: NF14885_high_9
Description: NF14885
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14885_high_9 |
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Alignment Details
Target: chr7 (Bit Score: 262; Significance: 1e-146; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 10 - 397
Target Start/End: Original strand, 32013445 - 32013828
Alignment:
| Q |
10 |
attgtaaatttgaccaaaataaataataaataattgtattaagttttatactcagtgacatttttgtaattaatcttttacaatgtgatgtcaaatgtgt |
109 |
Q |
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| T |
32013445 |
attgtaaatctgaccaaaataaataataaataattgtattaagttttatactcagtgacatttttgtaattaatcttttacaatgtgatgtcaaatgtgt |
32013544 |
T |
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| Q |
110 |
gatatattgattagnnnnnnnnnnatagtgtgatgtcaaataaatataaggttatctaatgtgaacagtgaacccagtccctcctatttttaataannnn |
209 |
Q |
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| T |
32013545 |
gatatattgattagttttttttttatagagtgatgtcaaataaatataaggttatctaatgtgaacagtgaacccagtccctcctatttttaataatttt |
32013644 |
T |
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| Q |
210 |
nnnnnnaatttnnnnnnnnnnnntaaggtagcctaaaatgtatcatggtctatcgaatattttgatgttatactgatgtgaataattaagttattcatag |
309 |
Q |
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||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32013645 |
tttt--aatttaaaaaaaaaa--taaggtagcctaaaatgtatcatggcctatcgaatattttgatgttatactgatgtgaataattaagttattcatag |
32013740 |
T |
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| Q |
310 |
gaatttttgcttatgagtttgaaattggagtagaaaagcttgtggttgcgtttctcctctagtgattctttgtacatggcgattattg |
397 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
32013741 |
gaatttttgcttatgagtttgaaattggagtagaaaagcttgtagtttcgtttctcctctagtgattctttgtacatggcgattattg |
32013828 |
T |
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