View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14887_low_5 (Length: 212)

Name: NF14887_low_5
Description: NF14887
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14887_low_5
NF14887_low_5
[»] chr1 (52 HSPs)
chr1 (96-198)||(31159241-31159343)
chr1 (1-98)||(39402003-39402100)
chr1 (1-94)||(9981647-9981740)
chr1 (1-94)||(26471102-26471195)
chr1 (1-94)||(27159395-27159488)
chr1 (1-94)||(31842832-31842925)
chr1 (1-94)||(44668130-44668223)
chr1 (1-94)||(47216736-47216829)
chr1 (1-94)||(11795933-11796026)
chr1 (1-94)||(12483665-12483758)
chr1 (1-94)||(14984837-14984930)
chr1 (1-94)||(23278038-23278131)
chr1 (1-94)||(34042696-34042789)
chr1 (1-94)||(44955243-44955336)
chr1 (1-94)||(1050888-1050981)
chr1 (1-94)||(47777518-47777611)
chr1 (1-94)||(47588374-47588467)
chr1 (1-88)||(47969700-47969788)
chr1 (1-94)||(17556752-17556846)
chr1 (1-82)||(25694331-25694412)
chr1 (1-94)||(11897054-11897147)
chr1 (1-94)||(16448145-16448238)
chr1 (1-94)||(12213511-12213604)
chr1 (5-79)||(11989796-11989870)
chr1 (13-96)||(37552139-37552222)
chr1 (48-94)||(11897138-11897184)
chr1 (40-86)||(37552217-37552263)
chr1 (38-94)||(12483628-12483684)
chr1 (48-88)||(44955212-44955252)
chr1 (48-94)||(11796017-11796063)
chr1 (48-94)||(14984921-14984967)
chr1 (48-94)||(17556837-17556883)
chr1 (48-94)||(25694403-25694449)
chr1 (48-94)||(27159358-27159404)
chr1 (48-94)||(31842795-31842841)
chr1 (48-94)||(39401966-39402012)
chr1 (48-94)||(44668093-44668139)
chr1 (48-94)||(47777481-47777527)
chr1 (48-89)||(9981731-9981772)
chr1 (48-94)||(1050972-1051018)
chr1 (38-96)||(19391948-19392006)
chr1 (48-94)||(26471065-26471111)
chr1 (48-94)||(34042780-34042826)
chr1 (48-94)||(47216699-47216745)
chr1 (36-85)||(5392218-5392267)
chr1 (2-71)||(11774536-11774605)
chr1 (1-82)||(12043616-12043696)
chr1 (1-58)||(29855085-29855142)
chr1 (61-94)||(47678371-47678404)
chr1 (1-45)||(1598418-1598461)
chr1 (40-84)||(12062635-12062679)
chr1 (58-94)||(39720779-39720815)
[»] scaffold0009 (2 HSPs)
scaffold0009 (1-94)||(49505-49598)
scaffold0009 (38-94)||(49579-49635)
[»] chr6 (38 HSPs)
chr6 (1-97)||(6330112-6330208)
chr6 (1-94)||(2830335-2830428)
chr6 (1-94)||(8383006-8383099)
chr6 (1-94)||(11572182-11572275)
chr6 (1-94)||(26602323-26602416)
chr6 (1-94)||(8099530-8099623)
chr6 (1-94)||(13853630-13853723)
chr6 (5-94)||(33052835-33052924)
chr6 (1-94)||(6143554-6143647)
chr6 (1-94)||(9644696-9644789)
chr6 (1-94)||(9650713-9650806)
chr6 (1-94)||(35031038-35031131)
chr6 (1-94)||(6068566-6068659)
chr6 (1-94)||(8417830-8417923)
chr6 (2-94)||(13043758-13043850)
chr6 (1-78)||(28747171-28747248)
chr6 (1-86)||(6068977-6069062)
chr6 (1-94)||(22896471-22896555)
chr6 (1-64)||(17992018-17992081)
chr6 (1-89)||(14936494-14936582)
chr6 (1-82)||(3788048-3788130)
chr6 (5-79)||(7597018-7597092)
chr6 (48-98)||(8382965-8383015)
chr6 (48-97)||(2830419-2830468)
chr6 (38-94)||(3788111-3788167)
chr6 (48-94)||(6330199-6330245)
chr6 (37-75)||(6549902-6549940)
chr6 (48-94)||(8099614-8099660)
chr6 (48-94)||(9644780-9644826)
chr6 (48-94)||(9650797-9650843)
chr6 (48-94)||(11572145-11572191)
chr6 (48-94)||(13853593-13853639)
chr6 (48-94)||(26602407-26602453)
chr6 (50-94)||(35031001-35031045)
chr6 (48-94)||(6068650-6068696)
chr6 (48-94)||(8417793-8417839)
chr6 (50-83)||(12473651-12473684)
chr6 (50-94)||(17992074-17992118)
[»] scaffold0204 (2 HSPs)
scaffold0204 (1-94)||(23785-23878)
scaffold0204 (48-94)||(23869-23915)
[»] chr8 (49 HSPs)
chr8 (1-94)||(54649-54742)
chr8 (1-94)||(2890199-2890292)
chr8 (1-94)||(3304315-3304408)
chr8 (1-94)||(6552655-6552748)
chr8 (1-94)||(7785815-7785908)
chr8 (1-94)||(12343177-12343270)
chr8 (1-94)||(43199391-43199484)
chr8 (4-94)||(7805739-7805829)
chr8 (1-95)||(31654612-31654706)
chr8 (1-94)||(12763691-12763784)
chr8 (1-94)||(15888389-15888482)
chr8 (1-94)||(32114512-32114605)
chr8 (1-94)||(39571240-39571333)
chr8 (5-94)||(44498228-44498317)
chr8 (1-94)||(7012171-7012264)
chr8 (1-94)||(25601037-25601130)
chr8 (1-94)||(32211400-32211493)
chr8 (1-94)||(33289298-33289391)
chr8 (1-94)||(13578857-13578950)
chr8 (32-94)||(4245649-4245711)
chr8 (5-94)||(8587170-8587259)
chr8 (6-91)||(28463614-28463699)
chr8 (5-89)||(17006916-17007000)
chr8 (5-89)||(17570247-17570331)
chr8 (40-94)||(25601000-25601054)
chr8 (40-94)||(27422266-27422320)
chr8 (1-82)||(24692016-24692096)
chr8 (48-94)||(54612-54658)
chr8 (48-94)||(2890162-2890208)
chr8 (48-98)||(3304274-3304324)
chr8 (48-94)||(6552739-6552785)
chr8 (48-94)||(7785778-7785824)
chr8 (37-87)||(13246801-13246851)
chr8 (48-94)||(33289261-33289307)
chr8 (48-94)||(39571203-39571249)
chr8 (48-94)||(43199354-43199400)
chr8 (9-82)||(24203018-24203091)
chr8 (48-88)||(12343146-12343186)
chr8 (50-94)||(32211363-32211407)
chr8 (48-94)||(7012255-7012301)
chr8 (48-94)||(7805699-7805745)
chr8 (48-94)||(12763654-12763700)
chr8 (5-79)||(28999089-28999163)
chr8 (48-94)||(31654697-31654743)
chr8 (48-94)||(44498187-44498233)
chr8 (61-94)||(6899419-6899452)
chr8 (1-94)||(33057594-33057687)
chr8 (69-98)||(36366148-36366177)
chr8 (50-94)||(32114475-32114519)
[»] chr7 (38 HSPs)
chr7 (1-94)||(1565766-1565859)
chr7 (1-94)||(1738484-1738577)
chr7 (1-94)||(7240749-7240842)
chr7 (1-94)||(31319436-31319529)
chr7 (1-94)||(38063950-38064043)
chr7 (1-94)||(46840860-46840953)
chr7 (1-96)||(23314176-23314271)
chr7 (1-94)||(7482225-7482318)
chr7 (1-94)||(9268756-9268849)
chr7 (1-94)||(36583395-36583488)
chr7 (1-94)||(94355-94448)
chr7 (1-94)||(22285699-22285792)
chr7 (5-94)||(28536792-28536881)
chr7 (1-94)||(36016233-36016326)
chr7 (1-94)||(38441460-38441553)
chr7 (5-94)||(4790248-4790337)
chr7 (1-78)||(33418392-33418469)
chr7 (1-88)||(40840156-40840243)
chr7 (1-94)||(9575409-9575502)
chr7 (2-97)||(7269443-7269538)
chr7 (48-96)||(22285783-22285831)
chr7 (48-94)||(1738447-1738493)
chr7 (48-94)||(7240833-7240879)
chr7 (48-94)||(7482309-7482355)
chr7 (48-94)||(9268840-9268886)
chr7 (48-94)||(23314139-23314185)
chr7 (48-94)||(38441544-38441590)
chr7 (48-94)||(46840944-46840990)
chr7 (48-97)||(31319396-31319445)
chr7 (48-88)||(33418460-33418500)
chr7 (48-87)||(40840126-40840165)
chr7 (40-87)||(46877666-46877713)
chr7 (48-94)||(94318-94364)
chr7 (48-94)||(4790332-4790378)
chr7 (48-94)||(36583479-36583525)
chr7 (48-94)||(38063913-38063959)
chr7 (50-94)||(9575495-9575539)
chr7 (48-84)||(36016206-36016242)
[»] chr5 (44 HSPs)
chr5 (1-94)||(9395350-9395443)
chr5 (1-94)||(37148992-37149085)
chr5 (1-94)||(582989-583082)
chr5 (1-94)||(11795168-11795261)
chr5 (1-94)||(23359942-23360035)
chr5 (1-94)||(36563575-36563668)
chr5 (1-94)||(41989444-41989537)
chr5 (1-94)||(13033051-13033144)
chr5 (1-94)||(13103024-13103117)
chr5 (1-94)||(20848074-20848167)
chr5 (1-94)||(17025624-17025717)
chr5 (5-94)||(26350391-26350480)
chr5 (1-94)||(4443960-4444053)
chr5 (5-94)||(37641953-37642043)
chr5 (1-70)||(21575970-21576039)
chr5 (1-73)||(6126845-6126917)
chr5 (23-94)||(38361750-38361821)
chr5 (6-87)||(13539909-13539986)
chr5 (2-80)||(3549585-3549663)
chr5 (48-94)||(23360026-23360072)
chr5 (5-94)||(2629585-2629674)
chr5 (1-94)||(39290775-39290867)
chr5 (48-95)||(6126908-6126955)
chr5 (50-97)||(11574166-11574213)
chr5 (48-94)||(9395434-9395480)
chr5 (48-94)||(13103108-13103154)
chr5 (48-94)||(17025708-17025754)
chr5 (48-94)||(36563538-36563584)
chr5 (48-94)||(41989407-41989453)
chr5 (40-89)||(966224-966273)
chr5 (1-45)||(35904448-35904490)
chr5 (5-79)||(40138831-40138906)
chr5 (48-94)||(11795252-11795298)
chr5 (48-94)||(13033135-13033181)
chr5 (48-94)||(21576030-21576076)
chr5 (5-87)||(27080981-27081063)
chr5 (48-94)||(37148955-37149001)
chr5 (48-94)||(37642038-37642084)
chr5 (1-59)||(39030590-39030648)
chr5 (1-70)||(2366375-2366444)
chr5 (39-88)||(3549553-3549602)
chr5 (48-89)||(4444044-4444085)
chr5 (36-80)||(2366352-2366396)
chr5 (50-86)||(36595782-36595818)
[»] chr4 (56 HSPs)
chr4 (1-94)||(3372121-3372214)
chr4 (1-94)||(47833611-47833704)
chr4 (1-94)||(48336263-48336356)
chr4 (1-94)||(3904720-3904813)
chr4 (1-94)||(3992976-3993069)
chr4 (1-94)||(6121930-6122023)
chr4 (1-94)||(20538723-20538816)
chr4 (1-94)||(24704370-24704463)
chr4 (1-94)||(42797732-42797825)
chr4 (5-94)||(53337370-53337459)
chr4 (3-94)||(33551201-33551292)
chr4 (1-95)||(46797724-46797818)
chr4 (1-94)||(5986876-5986969)
chr4 (1-94)||(7579310-7579403)
chr4 (1-94)||(47838654-47838747)
chr4 (1-94)||(52756675-52756768)
chr4 (2-94)||(43900549-43900641)
chr4 (3-94)||(26231577-26231668)
chr4 (1-94)||(33621796-33621889)
chr4 (1-94)||(51894619-51894712)
chr4 (1-94)||(40913226-40913319)
chr4 (1-94)||(41469803-41469896)
chr4 (1-82)||(41615713-41615794)
chr4 (1-82)||(3422073-3422153)
chr4 (3-94)||(25855083-25855174)
chr4 (40-100)||(4780371-4780431)
chr4 (1-83)||(29845656-29845738)
chr4 (1-79)||(50430455-50430533)
chr4 (16-88)||(17236839-17236912)
chr4 (1-88)||(17344219-17344306)
chr4 (48-94)||(42797816-42797862)
chr4 (48-94)||(3422144-3422190)
chr4 (38-88)||(5986950-5987000)
chr4 (48-94)||(6121893-6121939)
chr4 (40-94)||(24704446-24704500)
chr4 (1-79)||(31013036-31013114)
chr4 (48-94)||(41469766-41469812)
chr4 (48-94)||(46797809-46797855)
chr4 (48-94)||(47833695-47833741)
chr4 (48-94)||(47838617-47838663)
chr4 (48-94)||(51894582-51894628)
chr4 (48-97)||(3372205-3372254)
chr4 (48-97)||(7579394-7579443)
chr4 (48-89)||(40913194-40913235)
chr4 (50-94)||(3904683-3904727)
chr4 (50-94)||(20538686-20538730)
chr4 (48-96)||(44900078-44900126)
chr4 (4-83)||(6924724-6924802)
chr4 (48-94)||(3993060-3993106)
chr4 (48-94)||(33621880-33621926)
chr4 (48-94)||(43900633-43900679)
chr4 (48-94)||(48336347-48336393)
chr4 (48-94)||(53337454-53337500)
chr4 (38-87)||(41615683-41615732)
chr4 (1-80)||(9876653-9876732)
chr4 (40-80)||(32822285-32822325)
[»] chr3 (58 HSPs)
chr3 (1-94)||(4238594-4238687)
chr3 (1-94)||(10297979-10298072)
chr3 (1-94)||(19557089-19557182)
chr3 (1-94)||(22721931-22722024)
chr3 (1-94)||(44785433-44785526)
chr3 (1-94)||(49823418-49823511)
chr3 (1-96)||(37508919-37509014)
chr3 (1-94)||(8437425-8437518)
chr3 (1-94)||(8817423-8817516)
chr3 (1-94)||(17653712-17653805)
chr3 (1-94)||(21295363-21295456)
chr3 (1-94)||(34080067-34080160)
chr3 (1-94)||(38964392-38964485)
chr3 (1-94)||(48340397-48340490)
chr3 (4-94)||(2787872-2787962)
chr3 (1-94)||(9111531-9111624)
chr3 (1-94)||(36095717-36095810)
chr3 (1-94)||(40691033-40691126)
chr3 (1-94)||(42507392-42507485)
chr3 (1-94)||(46208030-46208123)
chr3 (1-94)||(51406673-51406766)
chr3 (1-94)||(42170383-42170476)
chr3 (5-94)||(35513473-35513562)
chr3 (1-87)||(33942969-33943055)
chr3 (1-89)||(6013373-6013461)
chr3 (1-94)||(9213516-9213609)
chr3 (9-82)||(43323072-43323145)
chr3 (48-94)||(4238678-4238724)
chr3 (11-77)||(8951943-8952009)
chr3 (48-94)||(17653796-17653842)
chr3 (48-94)||(21295326-21295372)
chr3 (48-94)||(37509005-37509051)
chr3 (48-94)||(46208114-46208160)
chr3 (48-97)||(19557049-19557098)
chr3 (39-88)||(33128212-33128261)
chr3 (48-97)||(34080027-34080076)
chr3 (1-79)||(29285797-29285873)
chr3 (1-86)||(5323214-5323300)
chr3 (48-94)||(6013336-6013382)
chr3 (1-87)||(8092595-8092681)
chr3 (36-94)||(9213588-9213646)
chr3 (48-94)||(10298063-10298109)
chr3 (48-94)||(38964476-38964522)
chr3 (48-94)||(40690996-40691042)
chr3 (48-94)||(48340481-48340527)
chr3 (48-94)||(49823381-49823427)
chr3 (48-89)||(9111499-9111540)
chr3 (48-89)||(42507360-42507401)
chr3 (48-96)||(44785394-44785442)
chr3 (50-94)||(51406759-51406803)
chr3 (48-95)||(2787831-2787878)
chr3 (48-87)||(8817393-8817432)
chr3 (48-87)||(22722015-22722054)
chr3 (41-84)||(26001141-26001184)
chr3 (48-94)||(8437509-8437555)
chr3 (48-94)||(9027142-9027188)
chr3 (26-94)||(2131734-2131802)
chr3 (48-84)||(42170356-42170392)
[»] chr2 (52 HSPs)
chr2 (1-94)||(3055558-3055651)
chr2 (1-94)||(13197747-13197840)
chr2 (1-94)||(15896842-15896935)
chr2 (1-94)||(37990050-37990143)
chr2 (1-94)||(41478676-41478769)
chr2 (1-94)||(44397547-44397640)
chr2 (1-94)||(44398686-44398779)
chr2 (3-94)||(4683971-4684062)
chr2 (1-95)||(37666647-37666741)
chr2 (1-94)||(6648556-6648649)
chr2 (1-94)||(13344484-13344577)
chr2 (1-94)||(16044354-16044447)
chr2 (1-94)||(16243820-16243913)
chr2 (1-94)||(38917559-38917652)
chr2 (1-94)||(9047792-9047885)
chr2 (1-94)||(12337974-12338067)
chr2 (1-94)||(15372226-15372319)
chr2 (1-92)||(30099219-30099310)
chr2 (1-83)||(41492933-41493015)
chr2 (1-94)||(12170436-12170529)
chr2 (2-66)||(44804616-44804680)
chr2 (2-75)||(16734802-16734875)
chr2 (4-63)||(41453090-41453149)
chr2 (14-88)||(31150659-31150733)
chr2 (48-98)||(13197706-13197756)
chr2 (48-94)||(41492896-41492942)
chr2 (1-84)||(36688892-36688975)
chr2 (48-94)||(3055642-3055688)
chr2 (48-94)||(6648519-6648565)
chr2 (48-94)||(9047755-9047801)
chr2 (48-94)||(12337937-12337983)
chr2 (36-94)||(13724102-13724160)
chr2 (1-83)||(13724139-13724221)
chr2 (48-94)||(15372310-15372356)
chr2 (48-94)||(15896926-15896972)
chr2 (48-94)||(37990013-37990059)
chr2 (48-94)||(38917522-38917568)
chr2 (48-94)||(41478639-41478685)
chr2 (48-94)||(44398770-44398816)
chr2 (1-94)||(30852654-30852747)
chr2 (23-79)||(4553069-4553125)
chr2 (48-87)||(16243790-16243829)
chr2 (36-83)||(23227344-23227391)
chr2 (48-94)||(13344568-13344614)
chr2 (48-94)||(16044317-16044363)
chr2 (48-94)||(30099182-30099228)
chr2 (48-94)||(37666610-37666656)
chr2 (48-86)||(44397631-44397669)
chr2 (48-98)||(44804574-44804624)
chr2 (5-89)||(16561042-16561126)
chr2 (48-80)||(36089457-36089489)
chr2 (1-85)||(45294333-45294416)
[»] scaffold0464 (2 HSPs)
scaffold0464 (1-96)||(6168-6263)
scaffold0464 (48-94)||(6131-6177)
[»] scaffold0482 (2 HSPs)
scaffold0482 (4-94)||(12860-12950)
scaffold0482 (48-94)||(12944-12990)
[»] scaffold1707 (1 HSPs)
scaffold1707 (1-94)||(1335-1428)
[»] scaffold0650 (1 HSPs)
scaffold0650 (1-94)||(22-114)
[»] scaffold0415 (1 HSPs)
scaffold0415 (10-83)||(13773-13845)
[»] scaffold0011 (2 HSPs)
scaffold0011 (1-94)||(231340-231433)
scaffold0011 (48-94)||(231303-231349)
[»] scaffold0171 (1 HSPs)
scaffold0171 (1-89)||(12390-12478)


Alignment Details
Target: chr1 (Bit Score: 95; Significance: 1e-46; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 96 - 198
Target Start/End: Original strand, 31159241 - 31159343
Alignment:
Q  96 tatcatatgtcgtcccaattgccaaagcaatctttagtgtcatcattgattaattacggtgggcagaggttccataaaaatctgattctgaaatcacctg 195  Q
    ||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31159241 tatcataggtcgtcccaattcccaaagcaatctttagtgtcatcattgattaattacggtgggcagaggttccataaaaatctgattctgaaatcacctg 31159340  T
Q  196 cct 198  Q
    |||    
T  31159341 cct 31159343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 39402003 - 39402100
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtagtat 98  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39402003 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtagtat 39402100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 9981740 - 9981647
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9981740 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 9981647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 26471102 - 26471195
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26471102 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 26471195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 27159395 - 27159488
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27159395 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 27159488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 31842832 - 31842925
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31842832 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 31842925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 44668130 - 44668223
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44668130 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 44668223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 47216736 - 47216829
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47216736 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 47216829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 11796026 - 11795933
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11796026 caacaaaagttgatgtatctagttaaaaattcagtccaaatgcattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 11795933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 12483665 - 12483758
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12483665 caacaaaagttgatgtatttagttcaaaattcagtctaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 12483758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 14984930 - 14984837
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  14984930 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagatagta 14984837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 23278038 - 23278131
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  23278038 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 23278131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 34042789 - 34042696
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  34042789 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 34042696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 44955243 - 44955336
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  44955243 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttttcttataaataggaccggaggtagta 44955336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 1050981 - 1050888
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||| ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1050981 caactaaagttgatgtatctagttaaaaattcagtccaaatgcattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 1050888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 47777518 - 47777611
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  47777518 caacaaaagttgatgtatctagttcaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccgggggtagta 47777611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 47588374 - 47588467
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  47588374 caacaaaagttgatgtatctaattaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccagaggtagta 47588467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 47969788 - 47969700
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc-ttataaataggaccggag 88  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  47969788 caacaaaagttgatgtatctagttaaaaattcagtctaaatacatttacttttgttgacctaaatttctctttataaataggaccggag 47969700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 17556846 - 17556752
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaataca-ttcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| ||||||||||||||||||||||||| || |||||||||||||||| |||||||||||||||||||| |||| ||||    
T  17556846 caacaaaagttgatgtatctagttaaaaattcagtccaaatacatttaacttttgttgacctaactttctcttataaataggaccagagggagta 17556752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 25694412 - 25694331
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaatagga 82  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||| |||| |||||||||||||||||||||||    
T  25694412 caacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttattgatctaaatttctcttataaatagga 25694331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 11897147 - 11897054
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||||||||   |||||||||||||| || ||||||  |||||||||||||||| ||||||||||||||||||||||||| ||||    
T  11897147 caacaaaagttgatgtatccggttaaaaattcagttcagatacatcaacttttgttgacctaactttctcttataaataggaccggagggagta 11897054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 16448145 - 16448238
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||| |||||| | ||| ||||||||||||| ||||||  ||||||||||||| || ||||||||||||||||||||||||| ||||    
T  16448145 caacaaaagtttatgtatctggttcaaaattcagtccagatacatcaacttttgttgacccaactttctcttataaataggaccggagggagta 16448238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 12213511 - 12213604
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||| ||||| |||||||||||||||||| || ||||||||| | ||||||||||||||  |||||||||||||| ||| ||||| ||||    
T  12213511 caacaaaaattgatttatttagttaaaaattcaatctaaatacattaatttttgttgacctaacattctcttataaataagactggagggagta 12213604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 79
Target Start/End: Complemental strand, 11989870 - 11989796
Alignment:
Q  5 aaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaata 79  Q
    |||| ||||||||||| ||||||||||||||||||||| |||   ||||||||||| || |||||||||||||||    
T  11989870 aaaaattgatgtatttggttaaaaattcagtccaaatatattagtttttgttgacccaactttctcttataaata 11989796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 37552222 - 37552139
Alignment:
Q  13 atgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtagt 96  Q
    |||||| | ||||||||||||||||| ||||||  ||| ||||||||  || ||| ||||||||||||||||||||| ||||||    
T  37552222 atgtatctggttaaaaattcagtccagatacatgaactgttgttgactcaactttatcttataaataggaccggagggagtagt 37552139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 11897138 - 11897184
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||||    
T  11897138 acttttgttgacccaaatttctcttataaataggaccggagggagta 11897184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 40 - 86
Target Start/End: Original strand, 37552217 - 37552263
Alignment:
Q  40 atacattcacttttgttgacctaaatttctcttataaataggaccgg 86  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||||    
T  37552217 atacattcatttttgttgacccaaatttctcttataaataggaccgg 37552263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 38 - 94
Target Start/End: Complemental strand, 12483684 - 12483628
Alignment:
Q  38 aaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||  ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  12483684 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 12483628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 48 - 88
Target Start/End: Complemental strand, 44955252 - 44955212
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggag 88  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  44955252 acttttgttgacctaaaattctcttataaataggaccggag 44955212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 11796017 - 11796063
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  11796017 acttttgttgacccaaaattctcttataaataggaccggagggagta 11796063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 14984921 - 14984967
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  14984921 acttttgttgacccaaaattctcttataaataggaccggagggagta 14984967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 17556837 - 17556883
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| || ||||||||||||||||||||||||| ||||    
T  17556837 acttttgttgacccaagtttctcttataaataggaccggagggagta 17556883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 25694403 - 25694449
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  25694403 acttttgttgacccaaaattctcttataaataggaccggagggagta 25694449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 27159404 - 27159358
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  27159404 acttttgttgacccaaaattctcttataaataggaccggagggagta 27159358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 31842841 - 31842795
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  31842841 acttttgttgacccaaaattctcttataaataggaccggagggagta 31842795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 39402012 - 39401966
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  39402012 acttttgttgacccaaaattctcttataaataggaccggagggagta 39401966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 44668139 - 44668093
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  44668139 acttttgttgacccaaaattctcttataaataggaccggagggagta 44668093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 47777527 - 47777481
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  47777527 acttttgttgacccaaaattctcttataaataggaccggagggagta 47777481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 89
Target Start/End: Original strand, 9981731 - 9981772
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggagg 89  Q
    ||||||||||||| ||| ||||||||||||||||||||||||    
T  9981731 acttttgttgacccaaaattctcttataaataggaccggagg 9981772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 1050972 - 1051018
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||| ||||||| ||| |||||||||||||||||||||||| ||||    
T  1050972 actttagttgacccaaaattctcttataaataggaccggagggagta 1051018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 96
Target Start/End: Original strand, 19391948 - 19392006
Alignment:
Q  38 aaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtagt 96  Q
    ||||||||| ||||||||| ||  || ||||||||||| ||||||| ||||||||||||    
T  19391948 aaatacattaacttttgttcactcaactttctcttatatataggactggaggtagtagt 19392006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 26471111 - 26471065
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||| | ||| |||||||||||||||||||||||| ||||    
T  26471111 acttttgttgatccaaaattctcttataaataggaccggagggagta 26471065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 34042780 - 34042826
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| ||||||||||||||| |||||||| ||||    
T  34042780 acttttgttgacccaaaattctcttataaatagaaccggagggagta 34042826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 47216745 - 47216699
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| ||||||||||||||| |||||||| ||||    
T  47216745 acttttgttgacccaaaattctcttataaatagtaccggagggagta 47216699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 36 - 85
Target Start/End: Original strand, 5392218 - 5392267
Alignment:
Q  36 ccaaatacattcacttttgttgacctaaatttctcttataaataggaccg 85  Q
    ||||||||||  |||||| ||||||||||||||||||||| || ||||||    
T  5392218 ccaaatacatcaacttttattgacctaaatttctcttatatattggaccg 5392267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 11774605 - 11774536
Alignment:
Q  2 aacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctct 71  Q
    |||||||||||| |||| ||||| ||||||||||  || |||||  | |||||||||||||| |||||||    
T  11774605 aacaaaagttgacgtatctagttcaaaattcagtttaattacatcaatttttgttgacctaactttctct 11774536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 12043696 - 12043616
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaatagga 82  Q
    |||||||| || |||||| | |||||||||| | || ||||||||  |||||||||||| ||||| ||| ||||||||||||    
T  12043696 caacaaaaattaatgtatcttgttaaaaattgaatc-aaatacatcaacttttgttgacttaaatatcttttataaatagga 12043616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 29855085 - 29855142
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttga 58  Q
    |||||||||||||||||||| ||||||||||    | ||||||||| |||||||||||    
T  29855085 caacaaaagttgatgtatttggttaaaaatttgtacgaaatacattaacttttgttga 29855142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 61 - 94
Target Start/End: Original strand, 47678371 - 47678404
Alignment:
Q  61 taaatttctcttataaataggaccggaggtagta 94  Q
    ||||||| ||||||||||||||||||||||||||    
T  47678371 taaatttttcttataaataggaccggaggtagta 47678404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 1598418 - 1598461
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacat 45  Q
    |||||||| ||||||||| | ||||||||||||||||||||||||    
T  1598418 caacaaaaattgatgtatat-gttaaaaattcagtccaaatacat 1598461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 84
Target Start/End: Original strand, 12062635 - 12062679
Alignment:
Q  40 atacattcacttttgttgacctaaatttctcttataaataggacc 84  Q
    ||||||| | |||||||||  ||||||||||||||||||||||||    
T  12062635 atacattaatttttgttgatttaaatttctcttataaataggacc 12062679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 39720779 - 39720815
Alignment:
Q  58 acctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||| | ||||||||||||||||||||||||||||    
T  39720779 acctaattgtctcttataaataggaccggaggtagta 39720815  T

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Target: scaffold0009 (Bit Score: 94; Significance: 5e-46; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 49598 - 49505
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49598 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 49505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 38 - 94
Target Start/End: Original strand, 49579 - 49635
Alignment:
Q  38 aaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||  ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  49579 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 49635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 93; Significance: 2e-45; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 6330208 - 6330112
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtagta 97  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6330208 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtagta 6330112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 2830428 - 2830335
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2830428 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 2830335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 8383006 - 8383099
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8383006 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 8383099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 11572182 - 11572275
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11572182 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 11572275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 26602416 - 26602323
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26602416 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 26602323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 8099623 - 8099530
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8099623 caacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 8099530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 13853630 - 13853723
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  13853630 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccgaaggtagta 13853723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 33052835 - 33052924
Alignment:
Q  5 aaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33052835 aaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 33052924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 6143647 - 6143554
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  6143647 caacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttgttgacctaaatttctcttataaataggatcggaggtagta 6143554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 9644789 - 9644696
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  9644789 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttatgttgacctaaatttctcttataaataggaccggaggtagta 9644696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 9650806 - 9650713
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  9650806 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttatgttgacctaaatttctcttataaataggaccggaggtagta 9650713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 35031038 - 35031131
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  35031038 caacaaaaattgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttttcttataaataggaccggaggtagta 35031131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 6068659 - 6068566
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  6068659 caacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttattgacctaaatttttcttataaataggaccggaggtagta 6068566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 8417830 - 8417923
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| |||| ||||    
T  8417830 caacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttgttgacctaaatttctcttataaataagaccagagggagta 8417923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 2 - 94
Target Start/End: Complemental strand, 13043850 - 13043758
Alignment:
Q  2 aacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||||||| |||||||||||||| | |||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  13043850 aacaaaagttgatgtatctagttaaaaattcaattcaaatacattcatttttgttgacctaaatttctcttataaatagaaccggaggtagta 13043758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 28747171 - 28747248
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 78  Q
    |||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  28747171 caacaaaagttgatgtatctaattaaaaattcagtccaaatacattcacttttgttgatctaaatttctcttataaat 28747248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 6068977 - 6069062
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccgg 86  Q
    ||||||||| ||| ||||  ||||||||||| || ||||||||||| |||||||||||||||||| ||| ||||||||||||||||    
T  6068977 caacaaaagatgaagtatcgagttaaaaatttagaccaaatacattaacttttgttgacctaaatatcttttataaataggaccgg 6069062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 22896555 - 22896471
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| ||||||||||||||||||||||||         |||||||||||| |||||||||||||||||||||||| ||||    
T  22896555 caacaaaagttgatgtatctagttaaaaattcagtccaaatac---------tgttgacctaaacttctcttataaataggaccggagggagta 22896471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 17992081 - 17992018
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaa 64  Q
    |||||||| | ||||||| |||||||||||||| ||||||||||||||||||| ||||||||||    
T  17992081 caacaaaaatcgatgtatctagttaaaaattcaatccaaatacattcacttttattgacctaaa 17992018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 14936494 - 14936582
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagg 89  Q
    ||||||||| |||||||| ||||||| ||||   |||||||||||  ||| ||||||||| |||| |||||||||||||||||| ||||    
T  14936494 caacaaaaggtgatgtatctagttaagaatttgttccaaatacatcaactattgttgacccaaatatctcttataaataggaccagagg 14936582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 3788130 - 3788048
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttg-ttgacctaaatttctcttataaatagga 82  Q
    |||||||||||||||||||||||||| ||||||||||| || ||   | ||||| |||||| || ||||||||||||||||||    
T  3788130 caacaaaagttgatgtatttagttaacaattcagtccacatccaacaaattttgattgacccaactttctcttataaatagga 3788048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 79
Target Start/End: Original strand, 7597018 - 7597092
Alignment:
Q  5 aaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaata 79  Q
    ||||||||||||||||||||||||||||||| |  ||||||  ||||||||| ||  || |||||||||||||||    
T  7597018 aaaagttgatgtatttagttaaaaattcagttcggatacatcaacttttgttaacacaactttctcttataaata 7597092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 48 - 98
Target Start/End: Complemental strand, 8383015 - 8382965
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagtagtat 98  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||||||    
T  8383015 acttttgttgacccaaaattctcttataaataggaccggagggagtagtat 8382965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 97
Target Start/End: Original strand, 2830419 - 2830468
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagtagta 97  Q
    ||||||||||||| ||| |||||||||||||||||||||||| |||||||    
T  2830419 acttttgttgacccaaaattctcttataaataggaccggagggagtagta 2830468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 38 - 94
Target Start/End: Original strand, 3788111 - 3788167
Alignment:
Q  38 aaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||  |||||||||||||||||||| ||||||||||| ||||||||| ||||    
T  3788111 aaatacatcaacttttgttgacctaaatttatcttataaataagaccggagggagta 3788167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 6330199 - 6330245
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  6330199 acttttgttgacccaaaattctcttataaataggaccggagggagta 6330245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 37 - 75
Target Start/End: Complemental strand, 6549940 - 6549902
Alignment:
Q  37 caaatacattcacttttgttgacctaaatttctcttata 75  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  6549940 caaatacattaacttttgttgacctaaatttctcttata 6549902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 8099614 - 8099660
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  8099614 acttttgttgacccaaaattctcttataaataggaccggagggagta 8099660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 9644780 - 9644826
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  9644780 acttttgttgacccaaaattctcttataaataggaccggagggagta 9644826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 9650797 - 9650843
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  9650797 acttttgttgacccaaaattctcttataaataggaccggagggagta 9650843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 11572191 - 11572145
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  11572191 acttttgttgacccaaaattctcttataaataggaccggagggagta 11572145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 13853639 - 13853593
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  13853639 acttttgttgacccaaaattctcttataaataggaccggagggagta 13853593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 26602407 - 26602453
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  26602407 acttttgttgacccaaaattctcttataaataggaccggagggagta 26602453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 94
Target Start/End: Complemental strand, 35031045 - 35031001
Alignment:
Q  50 ttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  35031045 ttttgttgacccaaaattctcttataaataggaccggaggaagta 35031001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 6068650 - 6068696
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||  ||| |||||||||||||||||||||||| ||||    
T  6068650 acttttgttgactcaaaattctcttataaataggaccggagggagta 6068696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 8417839 - 8417793
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| |||||||||||||||||||| ||| ||||    
T  8417839 acttttgttgacccaaaattctcttataaataggaccgaagggagta 8417793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 50 - 83
Target Start/End: Complemental strand, 12473684 - 12473651
Alignment:
Q  50 ttttgttgacctaaatttctcttataaataggac 83  Q
    |||| |||||||||||||||||||||||||||||    
T  12473684 ttttattgacctaaatttctcttataaataggac 12473651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 94
Target Start/End: Original strand, 17992074 - 17992118
Alignment:
Q  50 ttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||| ||| |||||||||||||||||||| ||| ||||    
T  17992074 ttttgttgacccaaaattctcttataaataggaccgaagggagta 17992118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 90; Significance: 1e-43; HSPs: 2)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 23878 - 23785
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23878 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 23785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 23869 - 23915
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| || ||||||||||||||||||||| ||||    
T  23869 acttttgttgacccaaaattttcttataaataggaccggagggagta 23915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 90; Significance: 1e-43; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 54649 - 54742
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54649 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 54742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 2890199 - 2890292
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2890199 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 2890292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 3304315 - 3304408
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3304315 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 3304408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 6552748 - 6552655
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6552748 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 6552655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 7785815 - 7785908
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7785815 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 7785908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 12343177 - 12343270
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12343177 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 12343270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 43199391 - 43199484
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43199391 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 43199484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 4 - 94
Target Start/End: Original strand, 7805739 - 7805829
Alignment:
Q  4 caaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7805739 caaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 7805829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 31654706 - 31654612
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtag 95  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  31654706 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtag 31654612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 12763691 - 12763784
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  12763691 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagta 12763784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 15888389 - 15888482
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15888389 caacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 15888482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 32114512 - 32114605
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32114512 caacaaaaattgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 32114605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 39571240 - 39571333
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  39571240 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgatctaaatttctcttataaataggaccggaggtagta 39571333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 44498228 - 44498317
Alignment:
Q  5 aaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44498228 aaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 44498317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 7012264 - 7012171
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  7012264 caacaaaagttgatgtatctagttaaaaattcagtccaaatatattcacttttgttgatctaaatttctcttataaataggaccggaggtagta 7012171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 25601037 - 25601130
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  25601037 caacaaaagttaatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggatcggaggtagta 25601130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 32211400 - 32211493
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  32211400 caacaaaaattgatgtatctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 32211493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 33289298 - 33289391
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||    
T  33289298 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttatgttgatctaaatttctcttataaataggaccggaggtagta 33289391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 13578950 - 13578857
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| || ||||||||||    
T  13578950 caacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttattgacctaaatttctcttataaatagaactggaggtagta 13578857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 32 - 94
Target Start/End: Original strand, 4245649 - 4245711
Alignment:
Q  32 cagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4245649 cagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 4245711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 5 - 94
Target Start/End: Complemental strand, 8587259 - 8587170
Alignment:
Q  5 aaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||| |||||||||||| |||| ||||||||  ||||||||||||| || ||||||||||||||||||||||||| ||||    
T  8587259 aaaagttgatgtatctagttaaaaatttagtcaaaatacatcaacttttgttgaccaaactttctcttataaataggaccggagggagta 8587170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 6 - 91
Target Start/End: Complemental strand, 28463699 - 28463614
Alignment:
Q  6 aaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggta 91  Q
    ||||||||| ||| | ||| ||||||||||||||||||||  ||||||||||||| || |||||||||||||||||||||||||||    
T  28463699 aaagttgatatatctggttcaaaattcagtccaaatacatcaacttttgttgacccaactttctcttataaataggaccggaggta 28463614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 17007000 - 17006916
Alignment:
Q  5 aaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagg 89  Q
    |||||||||||||| |  |||| ||||||||||| || |||  ||||||||||||| || |||||||||||||||||| ||||||    
T  17007000 aaaagttgatgtatctgattaacaattcagtccagatccatcaacttttgttgacccaactttctcttataaataggatcggagg 17006916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 17570247 - 17570331
Alignment:
Q  5 aaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagg 89  Q
    |||||||||||||| |  |||| ||||||||||| || |||  ||||||||||||| || |||||||||||||||||| ||||||    
T  17570247 aaaagttgatgtatctgattaacaattcagtccagatccatcaacttttgttgacccaactttctcttataaataggatcggagg 17570331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 40 - 94
Target Start/End: Complemental strand, 25601054 - 25601000
Alignment:
Q  40 atacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||| ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  25601054 atacattaacttttgttgacccaaaattctcttataaataggaccggagggagta 25601000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 40 - 94
Target Start/End: Original strand, 27422266 - 27422320
Alignment:
Q  40 atacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||| ||| ||||    
T  27422266 atacattcatttttgttgacccaaatttctcttataaataggaccgaagggagta 27422320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 24692016 - 24692096
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaatagga 82  Q
    |||||||||||||| ||| | ||||||| |||||| || ||||||  |||||||||||||||| ||| ||||||||||||||    
T  24692016 caacaaaagttgatatatctggttaaaa-ttcagttcagatacatcaacttttgttgacctaactttttcttataaatagga 24692096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 54658 - 54612
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  54658 acttttgttgacccaaaattctcttataaataggaccggagggagta 54612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 2890208 - 2890162
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  2890208 acttttgttgacccaaaattctcttataaataggaccggagggagta 2890162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 48 - 98
Target Start/End: Complemental strand, 3304324 - 3304274
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagtagtat 98  Q
    ||||||||||||| ||| || ||||||||||||||||||||| ||||||||    
T  3304324 acttttgttgacccaaaattttcttataaataggaccggagggagtagtat 3304274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 6552739 - 6552785
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  6552739 acttttgttgacccaaaattctcttataaataggaccggagggagta 6552785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 7785824 - 7785778
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  7785824 acttttgttgacccaaaattctcttataaataggaccggagggagta 7785778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 37 - 87
Target Start/End: Complemental strand, 13246851 - 13246801
Alignment:
Q  37 caaatacattcacttttgttgacctaaatttctcttataaataggaccgga 87  Q
    |||||||||||| ||||||||| | ||||||||||||||||||||| ||||    
T  13246851 caaatacattcatttttgttgatccaaatttctcttataaataggatcgga 13246801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 33289307 - 33289261
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  33289307 acttttgttgacccaaaattctcttataaataggaccggagggagta 33289261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 39571249 - 39571203
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  39571249 acttttgttgacccaaaattctcttataaataggaccggagggagta 39571203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 43199400 - 43199354
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  43199400 acttttgttgaccaaaaattctcttataaataggaccggagggagta 43199354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 82
Target Start/End: Original strand, 24203018 - 24203091
Alignment:
Q  9 gttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaatagga 82  Q
    |||||||||||| ||| |||||| |   |||||| || ||||||| ||||| ||||||||||||||||||||||    
T  24203018 gttgatgtatttggttcaaaatttaaatcaaatatatccacttttattgacataaatttctcttataaatagga 24203091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 88
Target Start/End: Complemental strand, 12343186 - 12343146
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggag 88  Q
    ||||||||||||| ||| |||||||||||||||||||||||    
T  12343186 acttttgttgaccaaaaattctcttataaataggaccggag 12343146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 94
Target Start/End: Complemental strand, 32211407 - 32211363
Alignment:
Q  50 ttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  32211407 ttttgttgacccaaaattctcttataaataggaccggagggagta 32211363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 7012255 - 7012301
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||| | ||| |||||||||||||||||||||||| ||||    
T  7012255 acttttgttgatccaaaattctcttataaataggaccggaggaagta 7012301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 7805745 - 7805699
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||| ||||| ||| |||||||||||||||||||||||| ||||    
T  7805745 acttttgctgacccaaaattctcttataaataggaccggagggagta 7805699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 12763700 - 12763654
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| || ||||||||||||||||||||| ||||    
T  12763700 acttttgttgacccaaaattatcttataaataggaccggagggagta 12763654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 79
Target Start/End: Original strand, 28999089 - 28999163
Alignment:
Q  5 aaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaata 79  Q
    ||||||| | |||| ||||||||||||||||| | ||||||  | ||||||||||| || ||||| |||||||||    
T  28999089 aaaagtttacgtatgtagttaaaaattcagtctagatacatcaatttttgttgaccaaactttcttttataaata 28999163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 31654697 - 31654743
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| |||| ||||||||||||||||||| ||||    
T  31654697 acttttgttgacccaaaattcttttataaataggaccggaggaagta 31654743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 44498233 - 44498187
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||| |||||| ||| |||||||||||||||||||||||| ||||    
T  44498233 acttttattgacccaaaattctcttataaataggaccggagggagta 44498187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 61 - 94
Target Start/End: Complemental strand, 6899452 - 6899419
Alignment:
Q  61 taaatttctcttataaataggaccggaggtagta 94  Q
    ||||||| ||||||||||||||||||||||||||    
T  6899452 taaatttttcttataaataggaccggaggtagta 6899419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 33057687 - 33057594
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||| ||||||||| | ||||||| |||| |||  |||||   | ||||||||| | || ||| ||||||||||||||||||||| ||||    
T  33057687 caacaaaaattgatgtatctggttaaaatttcactccggatacaacaatttttgttgatccaactttgtcttataaataggaccggagggagta 33057594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 69 - 98
Target Start/End: Original strand, 36366148 - 36366177
Alignment:
Q  69 tcttataaataggaccggaggtagtagtat 98  Q
    ||||||||||||||||||||||||||||||    
T  36366148 tcttataaataggaccggaggtagtagtat 36366177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 94
Target Start/End: Complemental strand, 32114519 - 32114475
Alignment:
Q  50 ttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||| ||| || ||||||||||||||||||||| ||||    
T  32114519 ttttgttgacccaaaattttcttataaataggaccggagggagta 32114475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 90; Significance: 1e-43; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 1565766 - 1565859
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1565766 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 1565859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 1738484 - 1738577
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1738484 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 1738577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 7240842 - 7240749
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7240842 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 7240749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 31319436 - 31319529
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31319436 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 31319529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 38063950 - 38064043
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38063950 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 38064043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 46840953 - 46840860
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46840953 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 46840860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 23314176 - 23314271
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtagt 96  Q
    |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23314176 caacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtagt 23314271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 7482318 - 7482225
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7482318 caacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 7482225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 9268849 - 9268756
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  9268849 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccagaggtagta 9268756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 36583488 - 36583395
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36583488 caacaaaagttgatgtatctagttaaaaattaagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 36583395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 94355 - 94448
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  94355 caacaaaagttgatgtatctagttaaaaattctgtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagatagta 94448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 22285792 - 22285699
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  22285792 caacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 22285699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 28536792 - 28536881
Alignment:
Q  5 aaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28536792 aaaagttgatgtatctagttaaaaattcattccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 28536881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 36016233 - 36016326
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  36016233 caacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 36016326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 38441553 - 38441460
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  38441553 caacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgttgacataaatttctcttataaataggaccggaggtagta 38441460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 5 - 94
Target Start/End: Complemental strand, 4790337 - 4790248
Alignment:
Q  5 aaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||| |||||||||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  4790337 aaaagttgatgtatctagttaaaaatttagtccaaatacattcatttttgttgacctaaatttttcttataaataggaccggaggtagta 4790248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 33418469 - 33418392
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 78  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  33418469 caacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaaaaat 33418392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 40840156 - 40840243
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 88  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| | ||||||| || ||| |||||||| |||||||||||||||    
T  40840156 caacaaaagttgatgtacttagttaaaaattcagtccaaatacattgatttttgttaacttaactttctcttctaaataggaccggag 40840243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 9575502 - 9575409
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||| ||||||||| ||||||||||||||||| |||||| || ||||||||||||| || ||||||||| |||||||||| |||| ||||    
T  9575502 caacaaaacttgatgtatctagttaaaaattcagtctaaatacgttaacttttgttgacccaactttctcttacaaataggaccagagggagta 9575409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 2 - 97
Target Start/End: Original strand, 7269443 - 7269538
Alignment:
Q  2 aacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtagta 97  Q
    |||||||||||||| || | ||||||||||||||  | ||||||  | ||||||||||| || ||| ||||||||||| ||||||||| |||||||    
T  7269443 aacaaaagttgatgcatctggttaaaaattcagtttagatacatcaatttttgttgacccaactttttcttataaataagaccggagggagtagta 7269538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 48 - 96
Target Start/End: Original strand, 22285783 - 22285831
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagtagt 96  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||||    
T  22285783 acttttgttgacccaaaattctcttataaataggaccggagggagtagt 22285831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 1738493 - 1738447
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  1738493 acttttgttgacccaaaattctcttataaataggaccggagggagta 1738447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 7240833 - 7240879
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  7240833 acttttgttgacccaaaattctcttataaataggaccggagggagta 7240879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 7482309 - 7482355
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  7482309 acttttgttgacccaaaattctcttataaataggaccggagggagta 7482355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 9268840 - 9268886
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  9268840 acttttgttgacccaaaattctcttataaataggaccggagggagta 9268886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 23314185 - 23314139
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  23314185 acttttgttgacccaaaattctcttataaataggaccggagggagta 23314139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 38441544 - 38441590
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  38441544 acttttgttgacccaaaattctcttataaataggaccggaggaagta 38441590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 46840944 - 46840990
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  46840944 acttttgttgacccaaaattctcttataaataggaccggagggagta 46840990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 97
Target Start/End: Complemental strand, 31319445 - 31319396
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagtagta 97  Q
    ||||||||||||| ||| ||||||||||||||| |||||||| |||||||    
T  31319445 acttttgttgacccaaaattctcttataaatagaaccggagggagtagta 31319396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 88
Target Start/End: Original strand, 33418460 - 33418500
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggag 88  Q
    ||||||||||||| ||| |||||||||||||||||||||||    
T  33418460 acttttgttgacccaaaattctcttataaataggaccggag 33418500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 87
Target Start/End: Complemental strand, 40840165 - 40840126
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccgga 87  Q
    ||||||||||||  ||||||||||||||||||||||||||    
T  40840165 acttttgttgacaaaaatttctcttataaataggaccgga 40840126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 87
Target Start/End: Original strand, 46877666 - 46877713
Alignment:
Q  40 atacattcacttttgttgacctaaatttctcttataaataggaccgga 87  Q
    ||||||| ||||||||||||| || ||||||||||| |||||||||||    
T  46877666 atacattaacttttgttgacccaactttctcttatatataggaccgga 46877713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 94364 - 94318
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| ||||||||||||||||| |||||| ||||    
T  94364 acttttgttgacccaaaattctcttataaataggatcggagggagta 94318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 4790332 - 4790378
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||| |||||| ||| |||||||||||||||||||||||| ||||    
T  4790332 acttttattgacccaaaattctcttataaataggaccggaggaagta 4790378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 36583479 - 36583525
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| ||||||||||||||||| |||||| ||||    
T  36583479 acttttgttgacccaaaattctcttataaataggatcggagggagta 36583525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 38063959 - 38063913
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| ||||||||||||||||||| |||| ||||    
T  38063959 acttttgttgacccaaaattctcttataaataggaccagagggagta 38063913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 94
Target Start/End: Original strand, 9575495 - 9575539
Alignment:
Q  50 ttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||| || ||||||||||||||||||||| ||| ||||    
T  9575495 ttttgttgaccaaactttctcttataaataggaccgaagggagta 9575539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 84
Target Start/End: Complemental strand, 36016242 - 36016206
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggacc 84  Q
    ||||||||||||| ||| |||||||||||||||||||    
T  36016242 acttttgttgacccaaaattctcttataaataggacc 36016206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 90; Significance: 1e-43; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 9395443 - 9395350
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9395443 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 9395350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 37148992 - 37149085
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37148992 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 37149085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 583082 - 582989
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  583082 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttatgttgacctaaatttctcttataaataggaccggaggtagta 582989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 11795261 - 11795168
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  11795261 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggatcggaggtagta 11795168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 23360035 - 23359942
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  23360035 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccagaggtagta 23359942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 36563575 - 36563668
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  36563575 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggatcggaggtagta 36563668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 41989444 - 41989537
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  41989444 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttacaaataggaccggaggtagta 41989537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 13033144 - 13033051
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  13033144 caacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggaagta 13033051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 13103117 - 13103024
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  13103117 caacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggaagta 13103024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 20848167 - 20848074
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  20848167 caacaaaaattgatgtatctagttaaaaattcagtccaaatacattcacttttattgacctaaatttctcttataaataggaccggaggtagta 20848074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 17025717 - 17025624
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| ||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  17025717 caacaaaagttgatgtatctagttaaaaattcagtttaaatacattcacttttgtggacctaaatttctcttataaataggaccggaggtagta 17025624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 26350391 - 26350480
Alignment:
Q  5 aaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  26350391 aaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggatcggagggagta 26350480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 4444053 - 4443960
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| || |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  4444053 caacaaaagttgatgtatctatttaaaaattcagtctaaatacattcacttttgttgacctaaatttctcttataaataggaccgaaggaagta 4443960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 5 - 94
Target Start/End: Complemental strand, 37642043 - 37641953
Alignment:
Q  5 aaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttg-ttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  37642043 aaaagttgatgtatctagttaaaaattcagtccacatacattcactttttattgacctaaatttctcttataaataggaccggaggtagta 37641953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 21576039 - 21575970
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 70  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  21576039 caacaaaagttgatgtatctaattaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 21575970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 6126917 - 6126845
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctctta 73  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||| ||||||||| ||||||||||||||    
T  6126917 caacaaaagttgatgtatctagttaaaaatttagtccaaatacattcatttttgttgatctaaatttctctta 6126845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 23 - 94
Target Start/End: Original strand, 38361750 - 38361821
Alignment:
Q  23 ttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| |||||| ||||    
T  38361750 ttaaaaattcagtccaaatacattcacttttattgacctaaatttatcttataaataggatcggaggaagta 38361821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 6 - 87
Target Start/End: Original strand, 13539909 - 13539986
Alignment:
Q  6 aaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccgga 87  Q
    ||||||||||||| ||||||||||||||||| ||||  |||    |||||||||||||||||||||||||||||||||||||    
T  13539909 aaagttgatgtatctagttaaaaattcagtctaaatttatt----tttgttgacctaaatttctcttataaataggaccgga 13539986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 3549585 - 3549663
Alignment:
Q  2 aacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaatag 80  Q
    ||||||||||||||||||  |||||||||| || ||| ||||||| | ||||||||||  |||| ||||||||||||||    
T  3549585 aacaaaagttgatgtattcggttaaaaatttagaccagatacattaatttttgttgactaaaatatctcttataaatag 3549663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 23360026 - 23360072
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||    
T  23360026 acttttgttgacccaaaattctcttataaataggaccggaggtagta 23360072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 2629585 - 2629674
Alignment:
Q  5 aaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||| ||||||||| |||||||||| | ||  || ||||||| |||||||||||||||||| | ||||||||| | ||||||||| ||||    
T  2629585 aaaatttgatgtatatagttaaaaaattagatcagatacattaacttttgttgacctaaatatttcttataaacaagaccggaggaagta 2629674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 39290867 - 39290775
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||| |||||| || ||||||||| | |||||||||||  | |||||||||||| |  ||||||||| |||||||||||||| ||||    
T  39290867 caacaaaagttaatgtatctaattaaaaatttaatccaaatacatcaatttttgttgacctgatattctcttat-aataggaccggagggagta 39290775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 95
Target Start/End: Original strand, 6126908 - 6126955
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagtag 95  Q
    ||||||||||||| ||| |||||||||||||||||||||||| |||||    
T  6126908 acttttgttgacccaaaattctcttataaataggaccggagggagtag 6126955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 97
Target Start/End: Original strand, 11574166 - 11574213
Alignment:
Q  50 ttttgttgacctaaatttctcttataaataggaccggaggtagtagta 97  Q
    |||||||||||||||| ||||||||||||||||||||||  |||||||    
T  11574166 ttttgttgacctaaatgtctcttataaataggaccggagagagtagta 11574213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 9395434 - 9395480
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  9395434 acttttgttgacccaaaattctcttataaataggaccggagggagta 9395480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 13103108 - 13103154
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  13103108 acttttgttgacccaaaattctcttataaataggaccggagggagta 13103154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 17025708 - 17025754
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  17025708 acttttgttgacccaaaattctcttataaataggaccggagggagta 17025754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 36563584 - 36563538
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  36563584 acttttgttgacccaaaattctcttataaataggaccggagggagta 36563538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 41989453 - 41989407
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  41989453 acttttgttgacccaaaattctcttataaataggaccggagggagta 41989407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 966224 - 966273
Alignment:
Q  40 atacattcacttttgttgacctaaatttctcttataaataggaccggagg 89  Q
    ||||||||| ||||||||| | |||||||||||||||||||||| |||||    
T  966224 atacattcatttttgttgatccaaatttctcttataaataggactggagg 966273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 35904490 - 35904448
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacat 45  Q
    ||||||||||  |||||||||||||||||||||||||||||||||    
T  35904490 caacaaaagt--atgtatttagttaaaaattcagtccaaatacat 35904448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 79
Target Start/End: Original strand, 40138831 - 40138906
Alignment:
Q  5 aaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgac-ctaaatttctcttataaata 79  Q
    ||||||||||||||||  ||||||||||||| |||||| ||| | |||||||||| | |  |||||||||||||||    
T  40138831 aaaagttgatgtatttgattaaaaattcagttcaaatatatttatttttgttgactcaacttttctcttataaata 40138906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 11795252 - 11795298
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| |||||||||||||||||| ||||| ||||    
T  11795252 acttttgttgacccaaaattctcttataaataggactggagggagta 11795298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 13033135 - 13033181
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| ||||||||||||||||| |||||| ||||    
T  13033135 acttttgttgacccaaaattctcttataaataggatcggagggagta 13033181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 21576030 - 21576076
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||| | ||| |||||||||||||||||||||||| ||||    
T  21576030 acttttgttgatccaaaattctcttataaataggaccggagggagta 21576076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 27080981 - 27081063
Alignment:
Q  5 aaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccgga 87  Q
    ||||| |||| |||||  ||||||||| ||   ||||||||  |||||||||||||||||| |||||| ||||||||| ||||    
T  27080981 aaaagatgatttatttgattaaaaatttagattaaatacatcaacttttgttgacctaaatgtctcttgtaaataggatcgga 27081063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 37149001 - 37148955
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| |||| ||||||||||||||||||| ||||    
T  37149001 acttttgttgacccaaaattctattataaataggaccggagggagta 37148955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 37642038 - 37642084
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||| |||||| ||| |||||||||||||||||||||||| ||||    
T  37642038 acttttattgacccaaaattctcttataaataggaccggagggagta 37642084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 39030590 - 39030648
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgac 59  Q
    ||||||||||| |||||||| ||||||||||    ||||||||||| ||||||||||||    
T  39030590 caacaaaagttaatgtatttggttaaaaatttgtaccaaatacattaacttttgttgac 39030648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 2366375 - 2366444
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 70  Q
    |||||| |||| |||||||| ||||||| ||||||||||||||||  |||||| || ||| || ||||||    
T  2366375 caacaagagttcatgtatttggttaaaatttcagtccaaatacatcaacttttattaaccaaactttctc 2366444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 3549602 - 3549553
Alignment:
Q  39 aatacattcacttttgttgacctaaatttctcttataaataggaccggag 88  Q
    |||||||  ||||||||| |  ||||||||||||||||||||||||||||    
T  3549602 aatacatcaacttttgttaatataaatttctcttataaataggaccggag 3549553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 48 - 89
Target Start/End: Original strand, 4444044 - 4444085
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggagg 89  Q
    ||||||||||| ||||| |||||||||||||| |||||||||    
T  4444044 acttttgttgatctaaaattctcttataaataagaccggagg 4444085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 80
Target Start/End: Complemental strand, 2366396 - 2366352
Alignment:
Q  36 ccaaatacattcacttttgttgacctaaatttctcttataaatag 80  Q
    ||||||||||  ||| ||||||||| |||||||||||||||||||    
T  2366396 ccaaatacatgaactcttgttgacccaaatttctcttataaatag 2366352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 86
Target Start/End: Complemental strand, 36595818 - 36595782
Alignment:
Q  50 ttttgttgacctaaatttctcttataaataggaccgg 86  Q
    |||||||||||||| ||||||||||||||| ||||||    
T  36595818 ttttgttgacctaactttctcttataaataagaccgg 36595782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 90; Significance: 1e-43; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 3372214 - 3372121
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3372214 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 3372121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 47833704 - 47833611
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47833704 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 47833611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 48336356 - 48336263
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48336356 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 48336263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 3904720 - 3904813
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  3904720 caacaaaaattgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttcttttataaataggaccggaggtagta 3904813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 3993069 - 3992976
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  3993069 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccgaaatttctcttataaataggaccggaggtagta 3992976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 6121930 - 6122023
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  6121930 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgatctaaatttctcttataaataggaccggaggtagta 6122023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 20538723 - 20538816
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20538723 caacaaaatttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 20538816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 24704463 - 24704370
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24704463 caacaaaagttaatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 24704370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 42797825 - 42797732
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  42797825 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttatatataggaccggaggtagta 42797732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 5 - 94
Target Start/End: Complemental strand, 53337459 - 53337370
Alignment:
Q  5 aaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53337459 aaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 53337370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 3 - 94
Target Start/End: Complemental strand, 33551292 - 33551201
Alignment:
Q  3 acaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33551292 acaaaagttgatgtatctagttaaaaattcagtcaaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 33551201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 46797818 - 46797724
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtag 95  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  46797818 caacaaaagttgatatatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaatagaaccggaggtagtag 46797724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 5986969 - 5986876
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | |||||||||||    
T  5986969 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctatatttctcttataaatagaatcggaggtagta 5986876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 7579403 - 7579310
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  7579403 caacaaaagttgatgtatctagttaaaaattcaatccaaatacattcacttttgttaacctaaatttctcttataaataggaccggaggtagta 7579310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 47838654 - 47838747
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  47838654 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgaccgaaatttctcttataaataggatcggaggtagta 47838747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 52756768 - 52756675
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  52756768 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttatgttgacctaaatttctcttataaataggaccggagatagta 52756675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 2 - 94
Target Start/End: Complemental strand, 43900641 - 43900549
Alignment:
Q  2 aacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||    
T  43900641 aacaaaagttgatgtatctagttaaaaattcagtccaaatacatttacttttgttgacctaaatttctcttataaataggaccggagggagta 43900549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 3 - 94
Target Start/End: Complemental strand, 26231668 - 26231577
Alignment:
Q  3 acaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  26231668 acaaaagttgatatatctagttaaaaattcagtccaaatacattcgcttttgttgacctaaatttctcttataaataggaccggaggtagta 26231577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 33621889 - 33621796
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||||||    
T  33621889 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaatagaaccgaaagtagta 33621796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 51894619 - 51894712
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| | ||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  51894619 caacaaaagttgatgtatctggttaaaaattcagtccaaaaacattcacttttgttgacctaaatttttcttataaataggaccggaggtagta 51894712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 40913226 - 40913319
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||| |||  |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  40913226 caacaaaagttgatatatccagttaaaaattcagtccaaatacattcacttttgttgatctaaatttctcttataaataggaccggagggagta 40913319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 41469803 - 41469896
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||    
T  41469803 caacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttcttttataaataggaccgaaggaagta 41469896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 41615713 - 41615794
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaatagga 82  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  41615713 caacaaaagttgatgtatttagttaaaaattaagtccaaatacattaacttttgttgacctaattttctcttataaatagga 41615794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 3422153 - 3422073
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaatagga 82  Q
    |||||||||||||||||| |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||    
T  3422153 caacaaaagttgatgtatctagttaaaaattcagttcaaatacattca-ttttgttgacctaaatttctcttataaatagga 3422073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 3 - 94
Target Start/End: Complemental strand, 25855174 - 25855083
Alignment:
Q  3 acaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||  || ||||||| |||||||||||| |||| ||||    
T  25855174 acaaaagtcgatgtatttggttaaaaattcagtccaaatacattaacttttgttgactcaactttctctcataaataggacctgagggagta 25855083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 40 - 100
Target Start/End: Original strand, 4780371 - 4780431
Alignment:
Q  40 atacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtagtatca 100  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  4780371 atacattaacttttgttgaccaaaatttctcttataaataggaccggagggagtagtatca 4780431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 29845738 - 29845656
Alignment:
Q  1 caacaaaagtt-gatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggac 83  Q
    ||||||||||| |||||||| ||||||||||||||| |||||| ||| | ||||||||||||||||||||||||||| ||||||    
T  29845738 caacaaaagtttgatgtatt-agttaaaaattcagttcaaatatattaatttttgttgacctaaatttctcttataagtaggac 29845656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 50430455 - 50430533
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaata 79  Q
    |||||||| ||||||||| | |||||||||||| |||||||||||  ||||||||||||| || || ||||||||||||    
T  50430455 caacaaaaattgatgtatctggttaaaaattcaatccaaatacatcaacttttgttgacccaacttgctcttataaata 50430533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 16 - 88
Target Start/End: Original strand, 17236839 - 17236912
Alignment:
Q  16 tatttagttaaaaattcagtccaaa-tacattcacttttgttgacctaaatttctcttataaataggaccggag 88  Q
    ||||| ||||||||||||||| ||| |||||  ||||||||||||| |||||| ||||||||||||||||||||    
T  17236839 tatttggttaaaaattcagtctaaaatacatcaacttttgttgacccaaatttttcttataaataggaccggag 17236912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 17344306 - 17344219
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 88  Q
    ||||||||||||||||||    ||||||||||||| || ||||||  |||||||||||  ||| |||||||||||||||| |||||||    
T  17344306 caacaaaagttgatgtatccgattaaaaattcagttcagatacatcaacttttgttgatttaactttctcttataaatagaaccggag 17344219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 42797816 - 42797862
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||||    
T  42797816 acttttgttgacctaaaattctcttataaataggaccggagggagta 42797862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 3422144 - 3422190
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  3422144 acttttgttgacccaaaattctcttataaataggaccggagggagta 3422190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 38 - 88
Target Start/End: Original strand, 5986950 - 5987000
Alignment:
Q  38 aaatacattcacttttgttgacctaaatttctcttataaataggaccggag 88  Q
    ||||||||  ||||||||||||| ||| |||||||||||||||||||||||    
T  5986950 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggag 5987000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 6121939 - 6121893
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  6121939 acttttgttgacccaaaattctcttataaataggaccggagggagta 6121893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 40 - 94
Target Start/End: Original strand, 24704446 - 24704500
Alignment:
Q  40 atacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||| ||||||||||||| ||| ||||||||||||||||| |||||| ||||    
T  24704446 atacattaacttttgttgacccaaaattctcttataaataggatcggagggagta 24704500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 31013114 - 31013036
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaata 79  Q
    ||||||||| |||||||| ||||||| |||| |  ||||||||||  ||||||||||| |||||| ||| |||||||||    
T  31013114 caacaaaagatgatgtatctagttaagaatttaaaccaaatacatctacttttgttgatctaaatgtcttttataaata 31013036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 41469812 - 41469766
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  41469812 acttttgttgaccaaaaattctcttataaataggaccggagggagta 41469766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 46797809 - 46797855
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  46797809 acttttgttgacccaaaattctcttataaataggaccggagggagta 46797855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 47833695 - 47833741
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  47833695 acttttgttgacccaaaattctcttataaataggaccggagggagta 47833741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 47838663 - 47838617
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  47838663 acttttgttgaccaaaaattctcttataaataggaccggagggagta 47838617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 51894628 - 51894582
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  51894628 acttttgttgacccaaaattctcttataaataggaccggagggagta 51894582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 97
Target Start/End: Original strand, 3372205 - 3372254
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagtagta 97  Q
    ||||||||||||| ||| || ||||||||||||||||||||| |||||||    
T  3372205 acttttgttgacccaaaattatcttataaataggaccggagggagtagta 3372254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 97
Target Start/End: Original strand, 7579394 - 7579443
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagtagta 97  Q
    ||||||||||||| ||| ||||||||||||||| |||||||| |||||||    
T  7579394 acttttgttgacccaaaattctcttataaatagaaccggaggaagtagta 7579443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 89
Target Start/End: Complemental strand, 40913235 - 40913194
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggagg 89  Q
    ||||||||||| | ||||||||||||||||||||||||||||    
T  40913235 acttttgttgatccaaatttctcttataaataggaccggagg 40913194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 94
Target Start/End: Complemental strand, 3904727 - 3904683
Alignment:
Q  50 ttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  3904727 ttttgttgacccaaaattctcttataaataggaccggagggagta 3904683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 94
Target Start/End: Complemental strand, 20538730 - 20538686
Alignment:
Q  50 ttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  20538730 ttttgttgacccaaaattctcttataaataggaccggagggagta 20538686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 96
Target Start/End: Complemental strand, 44900126 - 44900078
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagtagt 96  Q
    |||||||||||||  ||| ||||||||||||||||||||||| ||||||    
T  44900126 acttttgttgaccagaatatctcttataaataggaccggagggagtagt 44900078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 83
Target Start/End: Original strand, 6924724 - 6924802
Alignment:
Q  4 caaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggac 83  Q
    |||||||||||| || |  || |||||| || ||||||||||| |||||||||||||||| ||| ||||||| |||||||    
T  6924724 caaaagttgatgcatctgattcaaaatttagaccaaatacattaacttttgttgacctaacttt-tcttatatataggac 6924802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 3993060 - 3993106
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| |||||||||||||| ||||||||| ||||    
T  3993060 acttttgttgacccaaaattctcttataaataagaccggagggagta 3993106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 33621880 - 33621926
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| || ||||||||||||||||||||| ||||    
T  33621880 acttttgttgacccaaaattatcttataaataggaccggagggagta 33621926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 43900633 - 43900679
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||| ||| ||| |||||||||||||||||||||||| ||||    
T  43900633 acttttgttaacccaaaattctcttataaataggaccggaggaagta 43900679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 48336347 - 48336393
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| || ||||||||||||||||||||| ||||    
T  48336347 acttttgttgacccaaaattttcttataaataggaccggagggagta 48336393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 53337454 - 53337500
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||| |||||| ||| |||||||||||||||||||||||| ||||    
T  53337454 acttttattgacccaaaattctcttataaataggaccggagggagta 53337500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 38 - 87
Target Start/End: Complemental strand, 41615732 - 41615683
Alignment:
Q  38 aaatacattcacttttgttgacctaaatttctcttataaataggaccgga 87  Q
    ||||||||  ||||||||||| | || |||||||||||||||||||||||    
T  41615732 aaatacatcaacttttgttgatccaattttctcttataaataggaccgga 41615683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 9876732 - 9876653
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaa-ttcagtccaaatacattcacttttgttgacctaaatttctcttataaatag 80  Q
    |||||||| || |||||||| |||||||| || |||| | ||||||| | ||||||| || ||||||||||||||||||||    
T  9876732 caacaaaaatttatgtatttggttaaaaaattgagtc-agatacattaaattttgttaacgtaaatttctcttataaatag 9876653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 80
Target Start/End: Original strand, 32822285 - 32822325
Alignment:
Q  40 atacattcacttttgttgacctaaatttctcttataaatag 80  Q
    |||||| || |||||||||||||||||| ||||||||||||    
T  32822285 atacatccatttttgttgacctaaatttttcttataaatag 32822325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 90; Significance: 1e-43; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 4238687 - 4238594
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4238687 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 4238594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 10298072 - 10297979
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10298072 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 10297979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 19557089 - 19557182
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19557089 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 19557182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 22722024 - 22721931
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22722024 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 22721931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 44785433 - 44785526
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44785433 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 44785526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 49823418 - 49823511
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49823418 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 49823511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 37509014 - 37508919
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtagt 96  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  37509014 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtagt 37508919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 8437518 - 8437425
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  8437518 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttattgacctaaatttctcttataaataggaccggaggtagta 8437425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 8817423 - 8817516
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  8817423 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccgaaggtagta 8817516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 17653805 - 17653712
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  17653805 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 17653712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 21295363 - 21295456
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21295363 caacaaaagttgatgtatctaattaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 21295456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 34080067 - 34080160
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34080067 caacaaaagttgatgtatcttgttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 34080160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 38964485 - 38964392
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  38964485 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgatctaaatttctcttataaataggaccggaggtagta 38964392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 48340490 - 48340397
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  48340490 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttgtaaataggaccggaggtagta 48340397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 4 - 94
Target Start/End: Original strand, 2787872 - 2787962
Alignment:
Q  4 caaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  2787872 caaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagatagta 2787962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 9111531 - 9111624
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  9111531 caacaaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgttgacctaaatttctcttataaataggaccgaaggtagta 9111624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 36095717 - 36095810
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  36095717 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttatcttataaataggaccggagggagta 36095810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 40691033 - 40691126
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  40691033 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttaacctaaatttctcttataaataggaccggagttagta 40691126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 42507392 - 42507485
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  42507392 caacaaaagttgatgtatctagttcaaaattcagtccaaatacattcacttttgttgacctaaatttctattataaataggaccggaggtagta 42507485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 46208123 - 46208030
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  46208123 caacaaaagttgatgtatctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 46208030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 51406766 - 51406673
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  51406766 caacaaaaattgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagta 51406673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 42170383 - 42170476
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  42170383 caacaaaagttgatgtatctggttaaaaattcactccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagta 42170476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 5 - 94
Target Start/End: Complemental strand, 35513562 - 35513473
Alignment:
Q  5 aaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  35513562 aaaaggtgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccgaagggagta 35513473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 33942969 - 33943055
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccgga 87  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| ||||| |||||||||||| ||||    
T  33942969 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattaacttttgttgacctaactttcttttataaataggatcgga 33943055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 6013373 - 6013461
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagg 89  Q
    ||||||||||  || ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  6013373 caacaaaagtaaatttatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaattggactggagg 6013461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 9213609 - 9213516
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||| ||||||||||| |||| ||| | |||||| ||||||  ||||||||||||  |||| ||| ||||||||||||||||||| ||||    
T  9213609 caacaaaaattgatgtatttggttataaaattagtccagatacatcaacttttgttgactaaaatgtcttttataaataggaccggagggagta 9213516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 9 - 82
Target Start/End: Complemental strand, 43323145 - 43323072
Alignment:
Q  9 gttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaatagga 82  Q
    |||||||||||| |||||||||| | |||||||||||  ||||||||||||| || ||| ||||||||||||||    
T  43323145 gttgatgtatttggttaaaaatttaatccaaatacatcaacttttgttgacccaattttttcttataaatagga 43323072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 4238678 - 4238724
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||    
T  4238678 acttttgttgaccaaaaattctcttataaataggaccggaggtagta 4238724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 11 - 77
Target Start/End: Original strand, 8951943 - 8952009
Alignment:
Q  11 tgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaa 77  Q
    |||||||||| ||||||||||||||||||||||||| |||||||| ||   || |||||||||||||    
T  8951943 tgatgtattttgttaaaaattcagtccaaatacattaacttttgtcgattcaactttctcttataaa 8952009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 17653796 - 17653842
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||    
T  17653796 acttttgttgacccaaaattctcttataaataggaccggaggtagta 17653842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 21295372 - 21295326
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||||    
T  21295372 acttttgttgacctaaaattctcttataaataggaccggagggagta 21295326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 37509005 - 37509051
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||    
T  37509005 acttttgttgacccaaaattctcttataaataggaccggaggtagta 37509051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 46208114 - 46208160
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||||    
T  46208114 acttttgttgacctaaaattctcttataaataggaccggagggagta 46208160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 97
Target Start/End: Complemental strand, 19557098 - 19557049
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagtagta 97  Q
    ||||||||||||| ||| |||||||||||||||||||||||| |||||||    
T  19557098 acttttgttgacccaaaattctcttataaataggaccggagggagtagta 19557049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 33128261 - 33128212
Alignment:
Q  39 aatacattcacttttgttgacctaaatttctcttataaataggaccggag 88  Q
    |||||||| ||||||||||||||||||||||||||||| |||||| ||||    
T  33128261 aatacattaacttttgttgacctaaatttctcttataattaggactggag 33128212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 97
Target Start/End: Complemental strand, 34080076 - 34080027
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagtagta 97  Q
    ||||||||||||| ||| |||||||||||||||||||||||| |||||||    
T  34080076 acttttgttgacccaaaattctcttataaataggaccggagggagtagta 34080027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 29285797 - 29285873
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaata 79  Q
    ||||||||||| |||||| ||||| |||||| ||  || |||  ||||||||||||||||||||||| |||||||||||    
T  29285797 caacaaaagtttatgtatgtagttcaaaatttagatcagata--ttcacttttgttgacctaaatttatcttataaata 29285873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 5323300 - 5323214
Alignment:
Q  1 caacaaaagttgatgtatttagtt-aaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccgg 86  Q
    |||||||||||||||||||| ||| ||||||||| | ||||||||||   ||||||||||  || ||||| || |||||||||||||    
T  5323300 caacaaaagttgatgtatttggttaaaaaattcaattcaaatacattattttttgttgactcaattttcttttgtaaataggaccgg 5323214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 6013382 - 6013336
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  6013382 acttttgttgacccaaaattctcttataaataggaccggagggagta 6013336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 8092681 - 8092595
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccgga 87  Q
    ||||| |||||||||||| | |||||||||| |||| | ||||||  ||||| |||||   || |||||||||||||||||||||||    
T  8092681 caacagaagttgatgtatctggttaaaaatttagtcgagatacatcaactttagttgattcaattttctcttataaataggaccgga 8092595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 36 - 94
Target Start/End: Original strand, 9213588 - 9213646
Alignment:
Q  36 ccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||  | |||||||||||||||||||||| ||||||||||| ||||| ||||    
T  9213588 ccaaatacatcaatttttgttgacctaaatttctctaataaataggacgggagggagta 9213646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 10298063 - 10298109
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  10298063 acttttgttgacccaaaattctcttataaataggaccggagggagta 10298109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 38964476 - 38964522
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  38964476 acttttgttgaccaaaaattctcttataaataggaccggagggagta 38964522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 40691042 - 40690996
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  40691042 acttttgttgacccaaaattctcttataaataggaccggagggagta 40690996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 48340481 - 48340527
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  48340481 acttttgttgacccaaaattctcttataaataggaccggagggagta 48340527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 49823427 - 49823381
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  49823427 acttttgttgacccaaaattctcttataaataggaccggagggagta 49823381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 89
Target Start/End: Complemental strand, 9111540 - 9111499
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggagg 89  Q
    ||||||||||||| ||| ||||||||||||||||||||||||    
T  9111540 acttttgttgacccaaaattctcttataaataggaccggagg 9111499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 89
Target Start/End: Complemental strand, 42507401 - 42507360
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggagg 89  Q
    ||||||||||||| ||| ||||||||||||||||||||||||    
T  42507401 acttttgttgacccaaaattctcttataaataggaccggagg 42507360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 96
Target Start/End: Complemental strand, 44785442 - 44785394
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagtagt 96  Q
    ||||||||||||| ||| ||||||||||||||| |||||||| ||||||    
T  44785442 acttttgttgacccaaaattctcttataaatagaaccggaggaagtagt 44785394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 94
Target Start/End: Original strand, 51406759 - 51406803
Alignment:
Q  50 ttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  51406759 ttttgttgacccaaaattctcttataaataggaccggagggagta 51406803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 2787878 - 2787831
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagtag 95  Q
    ||||||| ||||| ||| |||||||||||||||||||||||| |||||    
T  2787878 acttttgctgacccaaaattctcttataaataggaccggagggagtag 2787831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 87
Target Start/End: Complemental strand, 8817432 - 8817393
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccgga 87  Q
    ||||||||||||| ||| ||||||||||||||||||||||    
T  8817432 acttttgttgacccaaaattctcttataaataggaccgga 8817393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 87
Target Start/End: Original strand, 22722015 - 22722054
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccgga 87  Q
    ||||||||||||| ||| ||||||||||||||||||||||    
T  22722015 acttttgttgacccaaaattctcttataaataggaccgga 22722054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 84
Target Start/End: Original strand, 26001141 - 26001184
Alignment:
Q  41 tacattcacttttgttgacctaaatttctcttataaataggacc 84  Q
    |||||| |||||||||||| ||||||||||||||||||| ||||    
T  26001141 tacattaacttttgttgacttaaatttctcttataaatatgacc 26001184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 8437509 - 8437555
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||  ||| |||||||||||||||||||||||| ||||    
T  8437509 acttttgttgactcaaaattctcttataaataggaccggagggagta 8437555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 9027188 - 9027142
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| || ||| ||||||||||||||||||||| ||||    
T  9027188 acttttgttgacccaactttatcttataaataggaccggagggagta 9027142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 94
Target Start/End: Original strand, 2131734 - 2131802
Alignment:
Q  26 aaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||| || ||| ||||||  ||||||||||||| |||| ||||| |||| |||||||||||| ||||    
T  2131734 aaaatttagaccagatacatcaacttttgttgacccaaatgtctctcataagtaggaccggagggagta 2131802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 84
Target Start/End: Complemental strand, 42170392 - 42170356
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggacc 84  Q
    ||||||||||||| ||| |||||||||||||||||||    
T  42170392 acttttgttgacccaaaattctcttataaataggacc 42170356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 90; Significance: 1e-43; HSPs: 52)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 3055651 - 3055558
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3055651 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 3055558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 13197747 - 13197840
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13197747 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 13197840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 15896935 - 15896842
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15896935 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 15896842  T

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Target: chr2; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 37990050 - 37990143
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37990050 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 37990143  T

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Target: chr2; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 41478676 - 41478769
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41478676 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 41478769  T

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Target: chr2; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 44397640 - 44397547
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44397640 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 44397547  T

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Target: chr2; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 44398779 - 44398686
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44398779 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 44398686  T

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Target: chr2; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 3 - 94
Target Start/End: Original strand, 4683971 - 4684062
Alignment:
Q  3 acaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4683971 acaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 4684062  T

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Target: chr2; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 37666647 - 37666741
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtag 95  Q
    |||| ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37666647 caactaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtag 37666741  T

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Target: chr2; HSP #10
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 6648556 - 6648649
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  6648556 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttatgttgacctaaatttctcttataaataggaccggaggtagta 6648649  T

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Target: chr2; HSP #11
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 13344577 - 13344484
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  13344577 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaatagaaccggaggtagta 13344484  T

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Target: chr2; HSP #12
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 16044354 - 16044447
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||| ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16044354 caactaaagttgatgtatctagttaaaaattcagttcaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 16044447  T

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Target: chr2; HSP #13
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 16243820 - 16243913
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  16243820 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttttcttataaataggaccggagatagta 16243913  T

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Target: chr2; HSP #14
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 38917559 - 38917652
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  38917559 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttattgacctaaatttatcttataaataggaccggaggtagta 38917652  T

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Target: chr2; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 9047792 - 9047885
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| |||||    
T  9047792 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcactttttttgacctaaatttctcttataaatatgaccggagatagta 9047885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 12337974 - 12338067
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| |||||||||||||    
T  12337974 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttttcttataaatagaaccggaggtagta 12338067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 15372319 - 15372226
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  15372319 caacaaaagttgatgtatctcgttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggactggagggagta 15372226  T

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Target: chr2; HSP #18
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 30099219 - 30099310
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtag 92  Q
    |||||||||||||||||| || ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||    
T  30099219 caacaaaagttgatgtatctaattaaaaattcaatccaaatacattcatttttgttgacctaaatttctcttataaataggatcggaggtag 30099310  T

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Target: chr2; HSP #19
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 41492933 - 41493015
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggac 83  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||    
T  41492933 caacaaaagttgatgtatctagttaaaaattctgtccaaatacattcacttttgttgacctaaatttcttttataaataggac 41493015  T

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Target: chr2; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 12170436 - 12170529
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| |||||||| ||||||||| |||||| ||||    
T  12170436 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattaacttttattgacctaattttctcttgtaaataggatcggagggagta 12170529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 44804616 - 44804680
Alignment:
Q  2 aacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatt 66  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||    
T  44804616 aacaaaagttgatgtatctagttaaaaattcagtccaaatacattcatttatgttgacctaaatt 44804680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 2 - 75
Target Start/End: Complemental strand, 16734875 - 16734802
Alignment:
Q  2 aacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttata 75  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||  ||||||||||||| || |||||||||||    
T  16734875 aacaaaagttgatgtatttggttaaaaattcagtccagatacatcaacttttgttgaccaaactttctcttata 16734802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 4 - 63
Target Start/End: Complemental strand, 41453149 - 41453090
Alignment:
Q  4 caaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaa 63  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |||||| |||||||||    
T  41453149 caaaagttgatgtattttgttaaaaattcagtccaaatacattaacttttattgacctaa 41453090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 88
Target Start/End: Complemental strand, 31150733 - 31150659
Alignment:
Q  14 tgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 88  Q
    ||||| |||||||||||| |||||||||||||  ||||||||||||  || |||||||||||||||||| |||||    
T  31150733 tgtatctagttaaaaatttagtccaaatacataaacttttgttgacgcaactttctcttataaataggatcggag 31150659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 48 - 98
Target Start/End: Complemental strand, 13197756 - 13197706
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagtagtat 98  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||||||    
T  13197756 acttttgttgacccaaaattctcttataaataggaccggagggagtagtat 13197706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 41492942 - 41492896
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||||    
T  41492942 acttttgttgacccaaatttctcttataaataggaccggagggagta 41492896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 36688975 - 36688892
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggacc 84  Q
    |||||||| ||||||||| | ||| ||||||||| | | ||||||  || |||||||||| || ||||||||||||||||||||    
T  36688975 caacaaaaattgatgtatcttgtttaaaattcagacaagatacatcaacgtttgttgaccaaactttctcttataaataggacc 36688892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 3055642 - 3055688
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  3055642 acttttgttgacccaaaattctcttataaataggaccggagggagta 3055688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 6648565 - 6648519
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  6648565 acttttgttgacccaaaattctcttataaataggaccggagggagta 6648519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 9047801 - 9047755
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  9047801 acttttgttgacccaaaattctcttataaataggaccggagggagta 9047755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 12337983 - 12337937
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  12337983 acttttgttgacccaaaattctcttataaataggaccggagggagta 12337937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 36 - 94
Target Start/End: Complemental strand, 13724160 - 13724102
Alignment:
Q  36 ccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||  ||||||||||||||| || |||||| |||||||||||||||| ||||    
T  13724160 ccaaatacatcaacttttgttgacctagatgtctcttgtaaataggaccggagggagta 13724102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 13724139 - 13724221
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggac 83  Q
    |||||||||||||||||||| |||||||| |  | ||| ||||||  |||||||||||||  ||| || ||||||||||||||    
T  13724139 caacaaaagttgatgtatttggttaaaaaattggaccagatacatcaacttttgttgaccagaatatcgcttataaataggac 13724221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 15372310 - 15372356
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  15372310 acttttgttgacccaaaattctcttataaataggaccggagggagta 15372356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 15896926 - 15896972
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  15896926 acttttgttgacccaaaattctcttataaataggaccggagggagta 15896972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 37990059 - 37990013
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  37990059 acttttgttgacccaaaattctcttataaataggaccggagggagta 37990013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 38917568 - 38917522
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  38917568 acttttgttgacccaaaattctcttataaataggaccggagggagta 38917522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 41478685 - 41478639
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  41478685 acttttgttgacccaaaattctcttataaataggaccggagggagta 41478639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 44398770 - 44398816
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  44398770 acttttgttgacccaaaattctcttataaataggaccggagggagta 44398816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 30852654 - 30852747
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||| |||||| |  || || |||||||| | ||||||  |||||| || | |||| ||||||||||||||||||||||||| ||||    
T  30852654 caacaaaagtttatgtatctgattcaatattcagtctagatacataaacttttattaatctaactttctcttataaataggaccggagggagta 30852747  T

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Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 79
Target Start/End: Original strand, 4553069 - 4553125
Alignment:
Q  23 ttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaata 79  Q
    ||||||||||| |||||||||||  | ||||||||||| || |||||||||||||||    
T  4553069 ttaaaaattcaatccaaatacatctatttttgttgaccaaactttctcttataaata 4553125  T

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Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 87
Target Start/End: Complemental strand, 16243829 - 16243790
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccgga 87  Q
    ||||||||||||| ||| ||||||||||||||||||||||    
T  16243829 acttttgttgacccaaaattctcttataaataggaccgga 16243790  T

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Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 83
Target Start/End: Original strand, 23227344 - 23227391
Alignment:
Q  36 ccaaatacattcacttttgttgacctaaatttctcttataaataggac 83  Q
    ||||||||||  ||||||||||||| |||| |||||||||||||||||    
T  23227344 ccaaatacatcaacttttgttgaccaaaatgtctcttataaataggac 23227391  T

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Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 13344568 - 13344614
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||| | ||| |||||||||||||||||||||||| ||||    
T  13344568 acttttgttgatccaaaattctcttataaataggaccggagggagta 13344614  T

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Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 16044363 - 16044317
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||| ||||||| ||| |||||||||||||||||||||||| ||||    
T  16044363 actttagttgacccaaaattctcttataaataggaccggagggagta 16044317  T

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Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 30099228 - 30099182
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| |||||| ||||||||||||||||| ||||    
T  30099228 acttttgttgacccaaaattctctaataaataggaccggagggagta 30099182  T

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Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 37666656 - 37666610
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||| ||||||| ||| |||||||||||||||||||||||| ||||    
T  37666656 actttagttgacccaaaattctcttataaataggaccggagggagta 37666610  T

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Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 86
Target Start/End: Original strand, 44397631 - 44397669
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccgg 86  Q
    ||||||||||||| ||| |||||||||||||||||||||    
T  44397631 acttttgttgacccaaaattctcttataaataggaccgg 44397669  T

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Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 98
Target Start/End: Complemental strand, 44804624 - 44804574
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagtagtat 98  Q
    ||||||||| || |||| |||||||||||||||||||||||| | ||||||    
T  44804624 acttttgttaacttaaaattctcttataaataggaccggagggaatagtat 44804574  T

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Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 16561042 - 16561126
Alignment:
Q  5 aaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagg 89  Q
    |||||||||||||||| ||| |||||| || ||||||| ||  |  |||||||| | || ||||||||||||||| || ||||||    
T  16561042 aaaagttgatgtattttgtttaaaatttagaccaaataaatcaatctttgttgatcaaactttctcttataaatatgatcggagg 16561126  T

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Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 80
Target Start/End: Complemental strand, 36089489 - 36089457
Alignment:
Q  48 acttttgttgacctaaatttctcttataaatag 80  Q
    |||||||||||||||||| ||||||||||||||    
T  36089489 acttttgttgacctaaatatctcttataaatag 36089457  T

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Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 45294416 - 45294333
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccg 85  Q
    ||||||||||| | |||||| |||||||| | ||||||| |||||| |||||||||||   |||| |||| | ||||||||||||    
T  45294416 caacaaaagttaaagtatttggttaaaaaattagtccaa-tacattaacttttgttgaatgaaatgtctcctgtaaataggaccg 45294333  T

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Target: scaffold0464 (Bit Score: 88; Significance: 2e-42; HSPs: 2)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 6168 - 6263
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtagt 96  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6168 caacaaaagttgatgtatctagttaaaaattcagtccacatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtagt 6263  T

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Target: scaffold0464; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 6177 - 6131
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||| ||| || ||||||||||||||||||||| ||||    
T  6177 acttttgttgacccaaaattttcttataaataggaccggagggagta 6131  T

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Target: scaffold0482 (Bit Score: 87; Significance: 7e-42; HSPs: 2)
Name: scaffold0482
Description:

Target: scaffold0482; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 4 - 94
Target Start/End: Complemental strand, 12950 - 12860
Alignment:
Q  4 caaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12950 caaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 12860  T

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Target: scaffold0482; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 12944 - 12990
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||| ||||| ||| |||||||||||||||||||||||| ||||    
T  12944 acttttgctgacccaaaattctcttataaataggaccggagggagta 12990  T

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Target: scaffold1707 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold1707
Description:

Target: scaffold1707; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 1428 - 1335
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  1428 caacaaaagttgatgtatctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggatgtagta 1335  T

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Target: scaffold0650 (Bit Score: 50; Significance: 8e-20; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 22 - 114
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||||||||| |||||||||| |||||||||||||  ||||||||||||| |  |||||| ||||||||| |||||||| ||||    
T  22 caacaaaagttgatgtatttggttaaaaatttagtccaaatacatcaacttttgttgaccaatctttctc-tataaatagaaccggagggagta 114  T

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Target: scaffold0415 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0415
Description:

Target: scaffold0415; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 10 - 83
Target Start/End: Original strand, 13773 - 13845
Alignment:
Q  10 ttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggac 83  Q
    |||||||||| ||||||||||||||| |||||| ||| | ||||||||||||||||||||||||||| ||||||    
T  13773 ttgatgtatt-agttaaaaattcagttcaaatatattaatttttgttgacctaaatttctcttataagtaggac 13845  T

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Target: scaffold0011 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 231340 - 231433
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    |||||||||||||| ||  ||||| ||||||||||||| ||||||  ||||||||||| | || |||||||||||| ||||| |||||| ||||    
T  231340 caacaaaagttgatatacctagttcaaaattcagtccagatacataaacttttgttgatccaactttctcttataattaggatcggagggagta 231433  T

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Target: scaffold0011; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 231349 - 231303
Alignment:
Q  48 acttttgttgacctaaatttctcttataaataggaccggaggtagta 94  Q
    ||||||||||||||||  ||||| |||||||||||||||||| ||||    
T  231349 acttttgttgacctaatattctcctataaataggaccggagggagta 231303  T

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Target: scaffold0171 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 12390 - 12478
Alignment:
Q  1 caacaaaagttgatgtatttagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagg 89  Q
    ||||||||  |||||||| | ||||| |||| || ||||| |||   |||||| |||||| |||| |||||||||||||||||||||||    
T  12390 caacaaaatgtgatgtatctggttaagaatttagaccaaacacaccaactttttttgaccaaaatatctcttataaataggaccggagg 12478  T

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