View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14889_low_13 (Length: 217)
Name: NF14889_low_13
Description: NF14889
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14889_low_13 |
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Alignment Details
Target: chr7 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 43519402 - 43519606
Alignment:
| Q |
1 |
tagtaaaaataacaaaggtcttgctaacaagtgtgtgcgctcgggacacttgtgcttctctaagggtctcaccccattcactaccc-gtgacttctttac |
99 |
Q |
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|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| |
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| T |
43519402 |
tagtaaaaataacagaggtcttgctaacaagtgtgtgcgctcgggacacttgtgcttctctaagggtctcaccccattcactaccccgtgatttctttac |
43519501 |
T |
|
| Q |
100 |
tcaccaatacttgatactatcatgtgcaacaccataaccaaccacaataatagcatgttggttatgtttcacgtttgtgattgtattccgtgtgaacaaa |
199 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
43519502 |
tcaccaatacttgatactatcatgtgcaacaccataaccaaccacaataatagcatgttggttatgtttcacgtttgtgattgtattccgtgtgaacaaa |
43519601 |
T |
|
| Q |
200 |
ggtga |
204 |
Q |
| |
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||||| |
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| T |
43519602 |
ggtga |
43519606 |
T |
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