View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14893_low_1 (Length: 341)
Name: NF14893_low_1
Description: NF14893
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14893_low_1 |
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Alignment Details
Target: chr8 (Bit Score: 315; Significance: 1e-177; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 315; E-Value: 1e-177
Query Start/End: Original strand, 10 - 324
Target Start/End: Original strand, 38100329 - 38100643
Alignment:
| Q |
10 |
attttctacttgtctcttctctgcatggtgatttcccatttgttctgcttcttgtcataatgcttgaagagccataccacttgcttttatcaatatgcaa |
109 |
Q |
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| T |
38100329 |
attttctacttgtctcttctctgcatggtgatttcccatttgttctgcttcttgtcataatgcttgaagagccataccacttgcttttatcaatatgcaa |
38100428 |
T |
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| Q |
110 |
tgtgtttggtagtgtagattcctaacattaccaaataaaccataacaaatattgagaatcattcatttgttttcaaaggtgattagtaattagcagaatt |
209 |
Q |
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| T |
38100429 |
tgtgtttggtagtgtagattcctaacattaccaaataaaccataacaaatattgagaatcattcatttgttttcaaaggtgattagtaattagcagaatt |
38100528 |
T |
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| Q |
210 |
gaatatttatggagattaatttataactcaccagaaacaacactgttgcacagtgcttaacgacctccaaattcatccgaacatcatctaggctcctgct |
309 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38100529 |
gaatatttatggagattaatttataactcaccagaaacaacactgttgcacagtgcttaacgacctccaaattcatccgaacatcatctaggctcctgct |
38100628 |
T |
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| Q |
310 |
tcaaattagtcataa |
324 |
Q |
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||||||||||||||| |
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| T |
38100629 |
tcaaattagtcataa |
38100643 |
T |
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