View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14895_high_13 (Length: 212)
Name: NF14895_high_13
Description: NF14895
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14895_high_13 |
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Alignment Details
Target: chr4 (Bit Score: 184; Significance: 1e-100; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 184; E-Value: 1e-100
Query Start/End: Original strand, 9 - 196
Target Start/End: Original strand, 30587099 - 30587286
Alignment:
| Q |
9 |
gaggagcagagaaatgccagatcagaggcaagaaaggaagaactacgcagacaagaaatacaggttgtcttttgagtctttcttctcatcgtgtactatc |
108 |
Q |
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|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30587099 |
gaggtgcagagaaatgccagatcagaggcaagaaaggaagaactacgcagacaagaaatacaggttgtcttttgagtctttcttctcatcgtgtactatc |
30587198 |
T |
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| Q |
109 |
tttctacgagggtagattatgtaggggtttcattgaagcagagcaaagttagtcttcttgcactctgttcattggtgggggtggaagc |
196 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30587199 |
tttctacgagggtagattatgtaggggtttcattgaagcagagcaaagttagtcttcttgcactctgttcattggtgggggtggaagc |
30587286 |
T |
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