View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14896_high_10 (Length: 356)

Name: NF14896_high_10
Description: NF14896
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14896_high_10
NF14896_high_10
[»] chr7 (33 HSPs)
chr7 (18-157)||(21629512-21629651)
chr7 (229-348)||(21629723-21629842)
chr7 (18-157)||(21652710-21652849)
chr7 (42-157)||(21788809-21788918)
chr7 (40-157)||(15714198-15714315)
chr7 (40-157)||(21647431-21647548)
chr7 (38-157)||(21764599-21764715)
chr7 (229-324)||(21792730-21792822)
chr7 (18-72)||(21628732-21628786)
chr7 (18-72)||(21628792-21628846)
chr7 (18-72)||(21628852-21628906)
chr7 (18-72)||(21628912-21628966)
chr7 (18-72)||(21628972-21629026)
chr7 (18-72)||(21629032-21629086)
chr7 (18-72)||(21629092-21629146)
chr7 (18-72)||(21629152-21629206)
chr7 (18-72)||(21629212-21629266)
chr7 (18-72)||(21629272-21629326)
chr7 (18-72)||(21629332-21629386)
chr7 (18-72)||(21629452-21629506)
chr7 (18-72)||(21652650-21652704)
chr7 (48-157)||(21705199-21705302)
chr7 (18-72)||(21629392-21629446)
chr7 (26-157)||(21792536-21792661)
chr7 (102-157)||(21657070-21657125)
chr7 (44-157)||(21807627-21807734)
chr7 (24-72)||(21652596-21652644)
chr7 (40-147)||(21786089-21786190)
chr7 (24-157)||(21746061-21746191)
chr7 (77-147)||(21714795-21714865)
chr7 (229-308)||(21657194-21657270)
chr7 (24-72)||(21628678-21628726)
chr7 (269-310)||(21705397-21705439)
[»] scaffold0182 (1 HSPs)
scaffold0182 (42-87)||(25941-25986)


Alignment Details
Target: chr7 (Bit Score: 132; Significance: 2e-68; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 18 - 157
Target Start/End: Original strand, 21629512 - 21629651
Alignment:
Q  18 ttgcaatcagagatggaggaggaaggagaaggagaacatagtgtatcaataccagtaccaaatgagtcacagttagagaaaccaactcatcttcttgatc 117  Q
    |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21629512 ttgcaatcagagatcgaggaggaaggagaaggagaacatagtgcatcaataccagtaccaaatgagtcacagttagagaaaccaactcatcttcttgatc 21629611  T
Q  118 ttcaacgcaaagtcatcctcactacatctaattccaaggt 157  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  21629612 ttcaacgcaaagtcatcctcactacatctaattccaaggt 21629651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 229 - 348
Target Start/End: Original strand, 21629723 - 21629842
Alignment:
Q  229 tttggttacaaaattaaggacagaattagaaacggagtaatttgtcttttttggtttctaaataatctttcctttgcaaaatgtgatatttattatagta 328  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21629723 tttggttacaaaattaaggacagaattagaaacggagtaatttgtcttttttggtttctaaataatctttcctttgcaaaatgtgatatttattatagta 21629822  T
Q  329 caatacaagcaattaagtat 348  Q
    ||||||||||||||||||||    
T  21629823 caatacaagcaattaagtat 21629842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 18 - 157
Target Start/End: Original strand, 21652710 - 21652849
Alignment:
Q  18 ttgcaatcagagatggaggaggaaggagaaggagaacatagtgtatcaataccagtaccaaatgagtcacagttagagaaaccaactcatcttcttgatc 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||   ||||||||||||||||| | ||| ||| ||||||||||||||||    
T  21652710 ttgcaatcagagatggaggaggaaggagaaggagaacatagtgtatcgataccttaaccaaatgagtcacagtcaaagacacccactcatcttcttgatc 21652809  T
Q  118 ttcaacgcaaagtcatcctcactacatctaattccaaggt 157  Q
    |||  |  ||| ||||||| ||||||||||||||||||||    
T  21652810 ttctgcataaaatcatcctaactacatctaattccaaggt 21652849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 42 - 157
Target Start/End: Original strand, 21788809 - 21788918
Alignment:
Q  42 ggagaaggagaacatagtgtatcaataccagtaccaaatgagtcacagttagagaaaccaactcatcttcttgatcttcaacgcaaagtcatcctcacta 141  Q
    ||||||||||||||||||||||||||| ||      |||||||| |||||||||| ||| |||||||||||||||||||| || ||| ||||||||||||    
T  21788809 ggagaaggagaacatagtgtatcaataaca------aatgagtcccagttagagacacccactcatcttcttgatcttcagcgtaaaatcatcctcacta 21788902  T
Q  142 catctaattccaaggt 157  Q
    ||||||||||||||||    
T  21788903 catctaattccaaggt 21788918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 40 - 157
Target Start/End: Original strand, 15714198 - 15714315
Alignment:
Q  40 aaggagaaggagaacatagtgtatcaataccagtaccaaatgagtcacagttagagaaaccaactcatcttcttgatcttcaacgcaaagtcatcctcac 139  Q
    ||||||||||| || ||||||||||||||||| ||| |||||||||||||| ||||| ||| ||||||||||||||||| || || |||   |||||||     
T  15714198 aaggagaaggacaatatagtgtatcaataccattacgaaatgagtcacagtcagagacacccactcatcttcttgatctacagcgtaaatatatcctcat 15714297  T
Q  140 tacatctaattccaaggt 157  Q
    ||||||||||||||||||    
T  15714298 tacatctaattccaaggt 15714315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 40 - 157
Target Start/End: Original strand, 21647431 - 21647548
Alignment:
Q  40 aaggagaaggagaacatagtgtatcaataccagtaccaaatgagtcacagttagagaaaccaactcatcttcttgatcttcaacgcaaagtcatcctcac 139  Q
    |||||||||||||||| ||||||||||||||| |||||| |||||| || | ||||| ||| ||||||||| |||||||||| || ||| |||||||||     
T  21647431 aaggagaaggagaacacagtgtatcaataccattaccaagtgagtcccaatcagagacacccactcatctttttgatcttcagcgtaaactcatcctcaa 21647530  T
Q  140 tacatctaattccaaggt 157  Q
    | ||||||||||||||||    
T  21647531 tccatctaattccaaggt 21647548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 38 - 157
Target Start/End: Original strand, 21764599 - 21764715
Alignment:
Q  38 ggaaggagaaggagaacatagtgtatcaataccagtaccaaatgagtcacagttagagaaaccaactcatcttcttgatcttcaacgcaaagtcatcctc 137  Q
    |||||||||||||||||||||||||||||||    || ||||||||||||||| ||||| ||| ||||||||||| |||||||| |  ||||||||||||    
T  21764599 ggaaggagaaggagaacatagtgtatcaataa---taacaaatgagtcacagtcagagacacccactcatcttctagatcttcagcataaagtcatcctc 21764695  T
Q  138 actacatctaattccaaggt 157  Q
    |||||||| || ||||||||    
T  21764696 actacatccaagtccaaggt 21764715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 229 - 324
Target Start/End: Original strand, 21792730 - 21792822
Alignment:
Q  229 tttggttacaaaattaaggacagaattagaaacggagtaatttgtcttttttggtttctaaataatctttcctttgcaaaatgtgatatttattat 324  Q
    ||||||||| ||||||||||||||||||||||||||||   |||| ||||| |||||||||||| |||||||||| ||||||||||||||||||||    
T  21792730 tttggttactaaattaaggacagaattagaaacggagt---ttgtttttttcggtttctaaatattctttcctttacaaaatgtgatatttattat 21792822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 21628732 - 21628786
Alignment:
Q  18 ttgcaatcagagatggaggaggaaggagaaggagaacatagtgtatcaataccag 72  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21628732 ttgcaatcagagatggaggaggaaggagaaggagaacatagtgtatcaataccag 21628786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 21628792 - 21628846
Alignment:
Q  18 ttgcaatcagagatggaggaggaaggagaaggagaacatagtgtatcaataccag 72  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21628792 ttgcaatcagagatggaggaggaaggagaaggagaacatagtgtatcaataccag 21628846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 21628852 - 21628906
Alignment:
Q  18 ttgcaatcagagatggaggaggaaggagaaggagaacatagtgtatcaataccag 72  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21628852 ttgcaatcagagatggaggaggaaggagaaggagaacatagtgtatcaataccag 21628906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 21628912 - 21628966
Alignment:
Q  18 ttgcaatcagagatggaggaggaaggagaaggagaacatagtgtatcaataccag 72  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21628912 ttgcaatcagagatggaggaggaaggagaaggagaacatagtgtatcaataccag 21628966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 21628972 - 21629026
Alignment:
Q  18 ttgcaatcagagatggaggaggaaggagaaggagaacatagtgtatcaataccag 72  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21628972 ttgcaatcagagatggaggaggaaggagaaggagaacatagtgtatcaataccag 21629026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 21629032 - 21629086
Alignment:
Q  18 ttgcaatcagagatggaggaggaaggagaaggagaacatagtgtatcaataccag 72  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21629032 ttgcaatcagagatggaggaggaaggagaaggagaacatagtgtatcaataccag 21629086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 21629092 - 21629146
Alignment:
Q  18 ttgcaatcagagatggaggaggaaggagaaggagaacatagtgtatcaataccag 72  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21629092 ttgcaatcagagatggaggaggaaggagaaggagaacatagtgtatcaataccag 21629146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 21629152 - 21629206
Alignment:
Q  18 ttgcaatcagagatggaggaggaaggagaaggagaacatagtgtatcaataccag 72  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21629152 ttgcaatcagagatggaggaggaaggagaaggagaacatagtgtatcaataccag 21629206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 21629212 - 21629266
Alignment:
Q  18 ttgcaatcagagatggaggaggaaggagaaggagaacatagtgtatcaataccag 72  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21629212 ttgcaatcagagatggaggaggaaggagaaggagaacatagtgtatcaataccag 21629266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 21629272 - 21629326
Alignment:
Q  18 ttgcaatcagagatggaggaggaaggagaaggagaacatagtgtatcaataccag 72  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21629272 ttgcaatcagagatggaggaggaaggagaaggagaacatagtgtatcaataccag 21629326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 21629332 - 21629386
Alignment:
Q  18 ttgcaatcagagatggaggaggaaggagaaggagaacatagtgtatcaataccag 72  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21629332 ttgcaatcagagatggaggaggaaggagaaggagaacatagtgtatcaataccag 21629386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 21629452 - 21629506
Alignment:
Q  18 ttgcaatcagagatggaggaggaaggagaaggagaacatagtgtatcaataccag 72  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21629452 ttgcaatcagagatggaggaggaaggagaaggagaacatagtgtatcaataccag 21629506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 21652650 - 21652704
Alignment:
Q  18 ttgcaatcagagatggaggaggaaggagaaggagaacatagtgtatcaataccag 72  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21652650 ttgcaatcagagatggaggaggaaggagaaggagaacatagtgtatcaataccag 21652704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 48 - 157
Target Start/End: Original strand, 21705199 - 21705302
Alignment:
Q  48 ggagaacatagtgtatcaataccagtaccaaatgagtcacagttagagaaaccaactcatcttcttgatcttcaacgcaaagtcatcctcactacatcta 147  Q
    |||||||||||||||||||||||      |||||||||||||| ||| | ||| || |||||||||||||||||||| ||| |||||||||| |||||||    
T  21705199 ggagaacatagtgtatcaatacc------aaatgagtcacagtcagaaacacccacacatcttcttgatcttcaacgtaaaatcatcctcaccacatcta 21705292  T
Q  148 attccaaggt 157  Q
    ||||||||||    
T  21705293 attccaaggt 21705302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 21629392 - 21629446
Alignment:
Q  18 ttgcaatcagagatggaggaggaaggagaaggagaacatagtgtatcaataccag 72  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  21629392 ttgcaatcagagatggaggaggaaggagaaggagaacatagtgtattaataccag 21629446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 157
Target Start/End: Original strand, 21792536 - 21792661
Alignment:
Q  26 agagatggaggaggaaggagaaggagaacatagtgtatcaataccagtaccaaatgagtcacagttagagaaaccaactcatcttcttgatcttcaacgc 125  Q
    ||||| |||| || ||||||||||| |||||||||||||||| ||||      ||||||||| |||||||  ||| | ||||||||||||||| || ||     
T  21792536 agagaaggagaagaaaggagaaggacaacatagtgtatcaatgccag------atgagtcactgttagagccacccaatcatcttcttgatctgcatcgt 21792629  T
Q  126 aaagtcatcctcactacatctaattccaaggt 157  Q
    ||| | ||||||||| ||||||||||||||||    
T  21792630 aaaatgatcctcactgcatctaattccaaggt 21792661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 102 - 157
Target Start/End: Original strand, 21657070 - 21657125
Alignment:
Q  102 actcatcttcttgatcttcaacgcaaagtcatcctcactacatctaattccaaggt 157  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||||    
T  21657070 actcatcttcttgatcttcaacggaaactcatcctcactacatcttattccaaggt 21657125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 44 - 157
Target Start/End: Complemental strand, 21807734 - 21807627
Alignment:
Q  44 agaaggagaacatagtgtatcaataccagtaccaaatgagtcacagttagagaaaccaactcatcttcttgatcttcaacgcaaagtcatcctcactaca 143  Q
    ||||| ||||||||||||||||||| ||      |||||||  |||| ||||| ||||||||||||||||||| |||| || ||| |||| ||| |||||    
T  21807734 agaagaagaacatagtgtatcaataaca------aatgagtggcagtcagagacaccaactcatcttcttgatgttcagcgtaaactcatgctccctaca 21807641  T
Q  144 tctaattccaaggt 157  Q
    ||||||||||||||    
T  21807640 tctaattccaaggt 21807627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 24 - 72
Target Start/End: Original strand, 21652596 - 21652644
Alignment:
Q  24 tcagagatggaggaggaaggagaaggagaacatagtgtatcaataccag 72  Q
    ||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  21652596 tcagagaaggagaaggaaggagaaggagaacatagtgtatcaataccag 21652644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 40 - 147
Target Start/End: Original strand, 21786089 - 21786190
Alignment:
Q  40 aaggagaaggagaacatagtgtatcaataccagtaccaaatgagtcacagttagagaaaccaactcatcttcttgatcttcaacgcaaagtcatcctcac 139  Q
    |||||||||||||||||||| ||||||||| |      ||||||||||||||||||| |||   |||||||||||||||||| || ||  |||||||||     
T  21786089 aaggagaaggagaacatagtttatcaatacga------aatgagtcacagttagagacaccctttcatcttcttgatcttcagcgtaatatcatcctcat 21786182  T
Q  140 tacatcta 147  Q
    ||||||||    
T  21786183 tacatcta 21786190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 157
Target Start/End: Original strand, 21746061 - 21746191
Alignment:
Q  24 tcagagatggaggaggaaggagaaggagaacatagtgtatcaataccagtaccaaatgagtcacagttagag---aaaccaactcatcttcttgatcttc 120  Q
    |||||||||||||||||||||| ||||||||||| ||||||||      || ||||||||||||| | ||||   | ||| |||||||||||||||||||    
T  21746061 tcagagatggaggaggaaggaggaggagaacataatgtatcaa------taacaaatgagtcacattcagagacaatacccactcatcttcttgatcttc 21746154  T
Q  121 aacgcaaagtcatcctcactacatctaattccaaggt 157  Q
      |  ||| ||| |||||||||||| || ||||||||    
T  21746155 tgcataaactcaacctcactacatccaagtccaaggt 21746191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 77 - 147
Target Start/End: Original strand, 21714795 - 21714865
Alignment:
Q  77 aaatgagtcacagttagagaaaccaactcatcttcttgatcttcaacgcaaagtcatcctcactacatcta 147  Q
    |||||||||||||||||||| |||   ||||||||||||||||||||| ||  ||||||||| ||||||||    
T  21714795 aaatgagtcacagttagagacaccctttcatcttcttgatcttcaacgtaatatcatcctcattacatcta 21714865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 229 - 308
Target Start/End: Original strand, 21657194 - 21657270
Alignment:
Q  229 tttggttacaaaattaaggacagaattagaaacggagtaatttgtcttttttggtttctaaataatctttcctttgcaaa 308  Q
    |||||||||||| ||||||||| ||||||||||||||   |||| ||||||  ||||||||||| | |||||||||||||    
T  21657194 tttggttacaaatttaaggacaaaattagaaacggag---tttgcctttttctgtttctaaatattatttcctttgcaaa 21657270  T

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Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 24 - 72
Target Start/End: Original strand, 21628678 - 21628726
Alignment:
Q  24 tcagagatggaggaggaaggagaaggagaacatagtgtatcaataccag 72  Q
    ||||||| |||| ||||||||||||||||||||||||||| ||||||||    
T  21628678 tcagagaaggagaaggaaggagaaggagaacatagtgtattaataccag 21628726  T

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Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 269 - 310
Target Start/End: Original strand, 21705397 - 21705439
Alignment:
Q  269 tttgtctttttt-ggtttctaaataatctttcctttgcaaaat 310  Q
    ||||||||| || ||||||||||||||||||||||||||||||    
T  21705397 tttgtctttgttcggtttctaaataatctttcctttgcaaaat 21705439  T

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Target: scaffold0182 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 42 - 87
Target Start/End: Original strand, 25941 - 25986
Alignment:
Q  42 ggagaaggagaacatagtgtatcaataccagtaccaaatgagtcac 87  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||    
T  25941 ggagaaggagaatatagtgtatcaataccattaccaaatgagtcac 25986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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