View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14896_high_13 (Length: 305)
Name: NF14896_high_13
Description: NF14896
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14896_high_13 |
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Alignment Details
Target: chr3 (Bit Score: 274; Significance: 1e-153; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 18 - 295
Target Start/End: Original strand, 55397138 - 55397415
Alignment:
| Q |
18 |
acatagatactgggcttggtctggagcgcatggctcgcattcttcaaaaggtatttcattcttttgaattgttgtaaaagtgagtgactatttgtacttt |
117 |
Q |
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| T |
55397138 |
acatagatactgggcttggtctggagcgcatggctcgcattcttcaaaaggtatttcattcttttgaattgctgtaaaagtgagtgactatttgtacttt |
55397237 |
T |
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| Q |
118 |
tacaagtgtttctaggagactagaactagaactatgatatttctgcaccctacaccacagcctcgcttaatgttgagaaaagtggggcaaggaaaaaggg |
217 |
Q |
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| T |
55397238 |
tacaagtgtttctaggagactagaactagaactatgatatttctgcaccctacaccacagcctcgcttaatgttgagaaaagtggggcaaggaaaaaggg |
55397337 |
T |
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| Q |
218 |
tgtgaatgaaacattactcacaatactctcattttcatttgctcctcaagtcctttttatatttattcattattcatt |
295 |
Q |
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| T |
55397338 |
tgtgaatgaaacattactcacaatactctcattttcatttgctcctcaagtcctttttatatttattcattattcatt |
55397415 |
T |
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