View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14896_high_14 (Length: 237)
Name: NF14896_high_14
Description: NF14896
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14896_high_14 |
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Alignment Details
Target: chr8 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 37435732 - 37435524
Alignment:
| Q |
1 |
tgcattccctttaataaatgttggtagctaaaaaatagttactcgtaagttggcatagaattgaatatgagatgaaataccgttgatgttgacatcagat |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
37435732 |
tgcattccctttaataaatgttggtagctaaaaaatagttactcgtaagttggcatagaattgaatatgagatgaaataccgttgatgttaacatcagat |
37435633 |
T |
|
| Q |
101 |
gtagcctctcgaaaaattgaaaaggcaatgttggcaaatcgcaacatttcatcgattacctgcaagaagaaatatagtctcatttctttgttgccgtagt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37435632 |
gtagcctctcgaaaaattgaaaaggcaatgttggcaaatcgcaacatttcatcgattacctgcaagaagaaatatagtctcatttctttgttgccgtagt |
37435533 |
T |
|
| Q |
201 |
ctcacatat |
209 |
Q |
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||||||||| |
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| T |
37435532 |
ctcacatat |
37435524 |
T |
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