View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14897_high_1 (Length: 510)
Name: NF14897_high_1
Description: NF14897
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14897_high_1 |
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Alignment Details
Target: chr7 (Bit Score: 335; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 335; E-Value: 0
Query Start/End: Original strand, 19 - 361
Target Start/End: Complemental strand, 40184546 - 40184204
Alignment:
| Q |
19 |
acgattcgggagagtagtatttgtgttgggtgtcatgatgatgaggaaggggagtatgttgtgtgggaatggcatgggcatattatggggtatagtgatg |
118 |
Q |
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| T |
40184546 |
acgattcgggagagtagtatttgtgttgggtgtcatgatgatgaggaaggggagtatgttgtgtgggaatggcatgggcatattatggggtatagtgatg |
40184447 |
T |
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| Q |
119 |
atcatgggttttcgcctgagtatatttatgggaattattttcagaggactgcgccaaaacctttggtgcgtccctatccatcaccagttggagatgaaga |
218 |
Q |
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| T |
40184446 |
atcatgggttttcgcctgagtatatttatgggaattattttcagaggactgcgccaaaacctttggtgcgtccttattcatcaccagttggagatgaaga |
40184347 |
T |
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| Q |
219 |
tgaagttgatgatgaagctgatgttgtcagtatgggtttgaaagatttgattgctgatgttgacactgatgctgatgatgctgctcctgctaggattctt |
318 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40184346 |
tgaagttgatgatgaagctgatgttgtcagtatgggtttgaaagatttgattgctgatgttgacactgatgctgatgatgctgctcctgctaggattctt |
40184247 |
T |
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| Q |
319 |
catcgcagtctcaatgctggttctgctcctccaaggtcaacaa |
361 |
Q |
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| T |
40184246 |
catcgcagtctcaatgctggttctgctcctccaaggtcaacaa |
40184204 |
T |
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