View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14898_high_5 (Length: 254)
Name: NF14898_high_5
Description: NF14898
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14898_high_5 |
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Alignment Details
Target: chr7 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 10 - 236
Target Start/End: Original strand, 46311388 - 46311614
Alignment:
| Q |
10 |
agacacatgtattgaaggatttgaaggcactgatagacgtcttgagagttacattagtggaagcataacacaagtaacacagcttatcagtaatgttctg |
109 |
Q |
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| T |
46311388 |
agacacatgtattgaagggtttgaaggcactgatagacgtcttgagagttacattagtggaagcgtaacacaagtaacacagcttatcagtaatgttctg |
46311487 |
T |
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| Q |
110 |
tctttgtacactcagcttaatcgcttacccttcaggcctccaaggaacactaccttgcatgaaactagtactgatgaaagtttggagtttcctgaatgga |
209 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46311488 |
tctttgtacactcagcttaatcgcttacccttcaggcctccaaggaacactaccttgcatgaaactagtactgatgaaagtttggagtttcctgaatgga |
46311587 |
T |
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| Q |
210 |
tgaacgaggctgatcaagagctactta |
236 |
Q |
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||| ||||||||||||||||||||||| |
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| T |
46311588 |
tgaccgaggctgatcaagagctactta |
46311614 |
T |
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