View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14898_low_9 (Length: 213)
Name: NF14898_low_9
Description: NF14898
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14898_low_9 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 177; Significance: 1e-95; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 177; E-Value: 1e-95
Query Start/End: Original strand, 6 - 213
Target Start/End: Complemental strand, 38639329 - 38639128
Alignment:
| Q |
6 |
aagttactttattattagtatgtcaatatgttgaaaatatataagcttgtttaaatgcatcgtcctggttgaaccaagacattcccaagtagtttgagaa |
105 |
Q |
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| T |
38639329 |
aagttactttattattagtatgtcaatatgttgaaaatatataagcttgtttaaatgaatcgtcctggttgaaccaagacattcccaagtagtttgagaa |
38639230 |
T |
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| Q |
106 |
agaggtcctctttttcaaactaaaggaattctataacacctatacatcaaattaaagatatatctcatacattacacatgttgttgttctatactgacac |
205 |
Q |
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| T |
38639229 |
agaggtcctttttttcaaactaaaggaattctataacacctatacatcaaat------tatatctcatacattacacatgttgttgttctatactgacac |
38639136 |
T |
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| Q |
206 |
atgtgatt |
213 |
Q |
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| T |
38639135 |
atgtgatt |
38639128 |
T |
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