View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14901_high_1_N (Length: 352)
Name: NF14901_high_1_N
Description: NF14901
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14901_high_1_N |
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Alignment Details
Target: chr7 (Bit Score: 292; Significance: 1e-164; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 292; E-Value: 1e-164
Query Start/End: Original strand, 30 - 350
Target Start/End: Complemental strand, 4710317 - 4709995
Alignment:
| Q |
30 |
ctttatacatttggata--aaattattcatttacgaaattagagtgtgcatctatactggcataacactcctatataaaccaaaaagttgtgattcgaat |
127 |
Q |
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| T |
4710317 |
ctttatacatttggatacaaaattattcatttacgaaattagagtgcccatctatactggcatcacactcctatataaaccaaaaagttgtgattcgaat |
4710218 |
T |
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| Q |
128 |
caacctagttagcgattcaaatcacctttgtatttttggatcatgtttcttcatcagagagtcataatttaaatcgaccacgtaatgtgactcaaatcaa |
227 |
Q |
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| T |
4710217 |
caacctagttagcgattcaaatcacctttgtatttttggatcatgtttcttaatcagagagtcataatttaaatcgaccacgtaatgtgactcaaatcaa |
4710118 |
T |
|
| Q |
228 |
cttgataaaaaatgattattcgaatccacctaataatgtgatttaaatcatgcacatgatttttcagatttttaatgcataagaattgtatactcataac |
327 |
Q |
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| T |
4710117 |
cttgataaaaagtgattattcgaatccacctaataatgtgatttaaatcatgcacatgatttttcagatttttaatgcataagaattgtatactcataac |
4710018 |
T |
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| Q |
328 |
tctgattcattctcatgttaata |
350 |
Q |
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| T |
4710017 |
tctgattcattctcatgttaata |
4709995 |
T |
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