View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14901_high_2 (Length: 346)
Name: NF14901_high_2
Description: NF14901
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14901_high_2 |
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Alignment Details
Target: chr1 (Bit Score: 270; Significance: 1e-151; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 30 - 323
Target Start/End: Original strand, 36750914 - 36751206
Alignment:
| Q |
30 |
accatcagtagcaacttctagctccctataagtgaaaacttgcactcctcgaaatttaggtgttggtggtgtcctgctcaaatttcccccataaagacac |
129 |
Q |
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| T |
36750914 |
accattagtagcaacttctagctccctataagtgaaaacttgcactcctcgaaatttaggtgttggtggtgtcctgctcaaatttcccccataaagacac |
36751013 |
T |
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| Q |
130 |
ccacctttaacatctgaaatcattgtttcatactaactatttattagcttcaaaagcctcagtcatccaaacttactataaaattttaattgacgacgaa |
229 |
Q |
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||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| |
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| T |
36751014 |
ccacctttaacatctgaaatcattgtttcataccaactatttattagcttcaaaagcctcagtcat-ctaacttactataaaattttaattgacgacgaa |
36751112 |
T |
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| Q |
230 |
aatttaaagaaattttttaaactttgctaaatatttaatggacatgaatttcaaatttcctggtctctttttgatatggaatacatctgatgat |
323 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
36751113 |
aatttaaagaaattttttaaactttgctaaatatttaatggacatgaatttcaaatttcctggtctctttttgatatggaatacatctaatgat |
36751206 |
T |
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