View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14902_low_3 (Length: 243)
Name: NF14902_low_3
Description: NF14902
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14902_low_3 |
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Alignment Details
Target: chr3 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 18 - 225
Target Start/End: Complemental strand, 45977981 - 45977774
Alignment:
| Q |
18 |
aagtgagcagtatgaagacatcagaaactgtgtttatacactcgaatgtgcttactgtacgaataaattatgacttactgatccatgccactcagcatgg |
117 |
Q |
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| T |
45977981 |
aagtgagcagtatgaagacatcagaaactgtgtttatacactcgaatgtgcttactgtacgaataaattatgacttactgatccatgccactcagcatgg |
45977882 |
T |
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| Q |
118 |
tgcacagttccgaatgagcctacatagttaaaaggacaggagcatttagagtcaccaaatgaggaaacaggtttttataccaaatctacgtgaattcaag |
217 |
Q |
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||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
45977881 |
tgcacagttccgaatgagcctacatagataaaaggacaggagcatttagagtcaccaaatgaggaaataggtttttataccaaatctacgtgaattcaag |
45977782 |
T |
|
| Q |
218 |
aagcagaa |
225 |
Q |
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|||||||| |
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| T |
45977781 |
aagcagaa |
45977774 |
T |
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