View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14903_low_12 (Length: 255)
Name: NF14903_low_12
Description: NF14903
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14903_low_12 |
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Alignment Details
Target: chr5 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 11 - 237
Target Start/End: Original strand, 19152239 - 19152465
Alignment:
| Q |
11 |
cagagaagaattgcaatggaagcagccaaaggaactgatttttgaagaatattgtaagaatgatgagaagataaggagcaagaaaactttgtgtcatttt |
110 |
Q |
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| T |
19152239 |
cagagaagaattgcaatggaagcagctaaaggaactgatttttgaagaatattgtaagaatgatgagaagataaggagcaagaaaactttgtgtcatttt |
19152338 |
T |
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| Q |
111 |
ttgttattcctaactgaaccttcttttgaggtgtgttgagtttttcacagaaggtggaaatctgaatgaaagatggtaatgaagaggaacccatgatgat |
210 |
Q |
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| T |
19152339 |
ttgttattcctaactgaaccttcttttgaggggtgctgagtttttcacagaaggtggaaatctgaatgaaagatggtaatgaagaggaacccatgatgat |
19152438 |
T |
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| Q |
211 |
gatgattggtttggcctcccctctcta |
237 |
Q |
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| T |
19152439 |
gatgattggtttggcttcccctctcta |
19152465 |
T |
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