View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14903_low_3 (Length: 526)

Name: NF14903_low_3
Description: NF14903
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14903_low_3
NF14903_low_3
[»] chr7 (43 HSPs)
chr7 (7-215)||(5814360-5814568)
chr7 (279-451)||(5814633-5814806)
chr7 (66-175)||(46354142-46354251)
chr7 (70-175)||(2541097-2541203)
chr7 (71-175)||(42805477-42805581)
chr7 (72-175)||(42798623-42798726)
chr7 (447-508)||(5814833-5814894)
chr7 (76-175)||(14732900-14732999)
chr7 (72-175)||(47716413-47716516)
chr7 (71-161)||(48735212-48735303)
chr7 (83-172)||(19426970-19427059)
chr7 (68-161)||(32758211-32758304)
chr7 (72-175)||(7193039-7193142)
chr7 (85-172)||(11617669-11617756)
chr7 (72-175)||(43557426-43557529)
chr7 (77-163)||(7794596-7794682)
chr7 (73-175)||(18326989-18327090)
chr7 (72-161)||(21172099-21172188)
chr7 (94-171)||(22065564-22065640)
chr7 (72-161)||(47077945-47078034)
chr7 (73-172)||(5180238-5180337)
chr7 (72-163)||(21447544-21447635)
chr7 (71-162)||(42495926-42496017)
chr7 (71-173)||(12473257-12473359)
chr7 (83-173)||(27629599-27629689)
chr7 (78-136)||(40463837-40463895)
chr7 (73-173)||(8149025-8149126)
chr7 (71-136)||(35334931-35334996)
chr7 (72-172)||(22699051-22699151)
chr7 (83-175)||(29140438-29140530)
chr7 (83-161)||(10693163-10693241)
chr7 (93-175)||(16341253-16341335)
chr7 (71-161)||(42476826-42476916)
chr7 (78-171)||(1423992-1424085)
chr7 (83-172)||(23419755-23419843)
chr7 (94-162)||(33872000-33872068)
chr7 (71-175)||(34626286-34626389)
chr7 (72-175)||(2663013-2663112)
chr7 (71-136)||(28078248-28078313)
chr7 (93-175)||(29907392-29907476)
chr7 (83-175)||(19265781-19265871)
chr7 (94-172)||(7644932-7645010)
chr7 (83-171)||(48123566-48123653)
[»] chr5 (25 HSPs)
chr5 (66-175)||(23974729-23974837)
chr5 (72-175)||(24448844-24448947)
chr5 (75-175)||(4619184-4619284)
chr5 (71-175)||(38879534-38879638)
chr5 (71-175)||(41014272-41014375)
chr5 (75-175)||(12006408-12006508)
chr5 (68-161)||(37024646-37024739)
chr5 (72-175)||(35710267-35710368)
chr5 (72-163)||(1565385-1565476)
chr5 (75-175)||(43334159-43334260)
chr5 (83-173)||(39301089-39301178)
chr5 (70-163)||(22187237-22187330)
chr5 (75-175)||(27328709-27328809)
chr5 (101-172)||(1405170-1405241)
chr5 (73-114)||(2838733-2838774)
chr5 (72-161)||(8170074-8170163)
chr5 (70-175)||(22600406-22600511)
chr5 (94-134)||(31362454-31362494)
chr5 (93-163)||(28516524-28516594)
chr5 (83-144)||(39079875-39079935)
chr5 (71-110)||(41956885-41956924)
chr5 (72-110)||(19438703-19438741)
chr5 (75-136)||(22861783-22861844)
chr5 (122-175)||(41425952-41426005)
chr5 (102-162)||(1850624-1850684)
[»] chr3 (39 HSPs)
chr3 (71-175)||(40272890-40272994)
chr3 (72-175)||(13730682-13730785)
chr3 (71-173)||(8247769-8247871)
chr3 (72-175)||(46421115-46421218)
chr3 (72-175)||(4495742-4495845)
chr3 (72-175)||(10870030-10870132)
chr3 (72-158)||(52926305-52926391)
chr3 (70-175)||(22609741-22609844)
chr3 (69-162)||(5173811-5173905)
chr3 (70-136)||(16735415-16735481)
chr3 (73-175)||(29366800-29366902)
chr3 (71-175)||(13628870-13628975)
chr3 (71-175)||(9607178-9607282)
chr3 (70-161)||(7696977-7697068)
chr3 (71-161)||(1217065-1217155)
chr3 (72-174)||(12914114-12914216)
chr3 (83-175)||(45620906-45620998)
chr3 (83-175)||(26573115-26573206)
chr3 (95-175)||(34420722-34420802)
chr3 (107-175)||(45139556-45139624)
chr3 (107-175)||(54032637-54032705)
chr3 (93-175)||(53996644-53996726)
chr3 (71-144)||(4537006-4537079)
chr3 (83-175)||(45948916-45949010)
chr3 (122-175)||(54374424-54374477)
chr3 (75-171)||(26782345-26782441)
chr3 (104-175)||(516417-516488)
chr3 (72-175)||(6411900-6412002)
chr3 (85-175)||(26869696-26869785)
chr3 (71-161)||(39203491-39203581)
chr3 (73-126)||(25517300-25517353)
chr3 (178-214)||(1609955-1609991)
chr3 (93-173)||(30928227-30928307)
chr3 (71-175)||(12525385-12525486)
chr3 (99-172)||(7942993-7943066)
chr3 (76-161)||(22123007-22123092)
chr3 (93-170)||(53062035-53062112)
chr3 (71-111)||(9276249-9276289)
chr3 (81-173)||(29106535-29106626)
[»] chr8 (37 HSPs)
chr8 (68-175)||(28817704-28817811)
chr8 (72-175)||(44530103-44530206)
chr8 (69-175)||(36720747-36720853)
chr8 (72-175)||(7136607-7136710)
chr8 (71-176)||(6760776-6760880)
chr8 (72-173)||(35261633-35261734)
chr8 (72-175)||(26954086-26954190)
chr8 (71-175)||(39461074-39461178)
chr8 (72-175)||(29521763-29521866)
chr8 (70-161)||(30454187-30454278)
chr8 (72-175)||(45071219-45071321)
chr8 (72-161)||(12670340-12670429)
chr8 (70-162)||(18164850-18164942)
chr8 (73-172)||(11748254-11748353)
chr8 (83-162)||(28407381-28407460)
chr8 (71-173)||(40604985-40605087)
chr8 (69-162)||(17823527-17823620)
chr8 (72-161)||(20869588-20869677)
chr8 (71-163)||(2626472-2626564)
chr8 (71-175)||(13160655-13160758)
chr8 (71-175)||(25250475-25250579)
chr8 (84-175)||(8897842-8897933)
chr8 (67-163)||(20284163-20284259)
chr8 (67-163)||(21070792-21070888)
chr8 (72-136)||(24245405-24245469)
chr8 (83-175)||(30962851-30962942)
chr8 (83-175)||(44781584-44781675)
chr8 (93-175)||(22598132-22598214)
chr8 (93-175)||(44742597-44742679)
chr8 (87-163)||(12625858-12625934)
chr8 (83-175)||(42083777-42083868)
chr8 (71-114)||(23286432-23286475)
chr8 (279-424)||(24643793-24643938)
chr8 (93-163)||(11001040-11001110)
chr8 (97-175)||(35105902-35105980)
chr8 (95-175)||(24365137-24365218)
chr8 (74-126)||(31454144-31454196)
[»] chr1 (47 HSPs)
chr1 (72-175)||(46991781-46991884)
chr1 (72-172)||(46248034-46248134)
chr1 (94-175)||(6925099-6925180)
chr1 (72-175)||(18944620-18944723)
chr1 (72-175)||(20004170-20004273)
chr1 (71-173)||(14617014-14617116)
chr1 (70-136)||(34714598-34714664)
chr1 (71-161)||(34725188-34725278)
chr1 (78-175)||(30395806-30395903)
chr1 (83-175)||(18724623-18724714)
chr1 (73-173)||(24564322-24564422)
chr1 (72-136)||(47214488-47214552)
chr1 (72-175)||(32632635-32632737)
chr1 (75-174)||(25290143-25290244)
chr1 (83-175)||(22327088-22327179)
chr1 (87-175)||(23768398-23768486)
chr1 (72-173)||(10668197-10668303)
chr1 (72-162)||(22930158-22930248)
chr1 (95-173)||(25468343-25468421)
chr1 (65-175)||(41319884-41319994)
chr1 (71-175)||(19932833-19932934)
chr1 (77-162)||(45402077-45402161)
chr1 (71-175)||(8197019-8197123)
chr1 (93-173)||(27136732-27136812)
chr1 (71-162)||(27474257-27474348)
chr1 (83-162)||(33222972-33223051)
chr1 (93-175)||(35117846-35117928)
chr1 (74-136)||(40424721-40424783)
chr1 (83-172)||(2435868-2435956)
chr1 (83-172)||(4430107-4430196)
chr1 (76-161)||(19414420-19414505)
chr1 (72-161)||(38478372-38478461)
chr1 (93-165)||(2435981-2436053)
chr1 (78-153)||(9939443-9939519)
chr1 (71-175)||(27201623-27201727)
chr1 (72-136)||(45812652-45812716)
chr1 (78-161)||(12126927-12127010)
chr1 (94-160)||(20036219-20036285)
chr1 (93-163)||(52910215-52910285)
chr1 (72-165)||(10163736-10163829)
chr1 (77-134)||(18742080-18742137)
chr1 (70-159)||(22151479-22151568)
chr1 (83-175)||(11596502-11596592)
chr1 (95-175)||(44485187-44485267)
chr1 (93-175)||(17470424-17470506)
chr1 (122-175)||(35005150-35005203)
chr1 (178-214)||(14876895-14876931)
[»] chr2 (37 HSPs)
chr2 (70-163)||(25079808-25079901)
chr2 (72-175)||(8455394-8455497)
chr2 (69-175)||(14530269-14530375)
chr2 (89-175)||(17667973-17668059)
chr2 (73-175)||(24200703-24200805)
chr2 (72-175)||(7214488-7214591)
chr2 (67-161)||(9671129-9671224)
chr2 (72-175)||(12023997-12024099)
chr2 (73-175)||(10543653-10543755)
chr2 (74-163)||(11514392-11514481)
chr2 (74-173)||(19977794-19977893)
chr2 (72-173)||(5840982-5841083)
chr2 (71-175)||(23397719-23397821)
chr2 (94-175)||(40416949-40417030)
chr2 (72-175)||(17705449-17705552)
chr2 (84-163)||(39914396-39914475)
chr2 (89-175)||(17623535-17623621)
chr2 (74-175)||(17896215-17896317)
chr2 (71-161)||(21779351-21779441)
chr2 (93-175)||(33795260-33795342)
chr2 (71-136)||(22371010-22371075)
chr2 (96-162)||(44604832-44604898)
chr2 (75-136)||(25249854-25249915)
chr2 (72-117)||(26684758-26684803)
chr2 (70-114)||(39189560-39189604)
chr2 (96-163)||(5450263-5450330)
chr2 (346-424)||(6590112-6590191)
chr2 (93-172)||(29419970-29420049)
chr2 (93-175)||(21377151-21377233)
chr2 (178-215)||(38575677-38575714)
chr2 (98-158)||(17380331-17380391)
chr2 (83-162)||(24860077-24860156)
chr2 (72-114)||(27466269-27466311)
chr2 (78-136)||(27573581-27573639)
chr2 (93-175)||(44521451-44521533)
chr2 (73-114)||(14544018-14544059)
chr2 (88-144)||(15896350-15896406)
[»] chr4 (50 HSPs)
chr4 (72-175)||(21646918-21647021)
chr4 (72-175)||(10660358-10660461)
chr4 (72-175)||(10874503-10874606)
chr4 (70-175)||(6430704-6430808)
chr4 (83-172)||(16408684-16408773)
chr4 (71-175)||(5648212-5648315)
chr4 (69-161)||(20224935-20225027)
chr4 (73-173)||(54966977-54967076)
chr4 (75-173)||(14983791-14983889)
chr4 (71-161)||(48598915-48599005)
chr4 (72-136)||(11054263-11054327)
chr4 (75-162)||(17315389-17315476)
chr4 (71-161)||(5306755-5306845)
chr4 (72-173)||(37494805-37494906)
chr4 (72-144)||(55830829-55830902)
chr4 (72-136)||(23501747-23501811)
chr4 (83-175)||(42164227-42164317)
chr4 (69-175)||(54730200-54730307)
chr4 (93-163)||(487225-487295)
chr4 (72-161)||(47528620-47528709)
chr4 (72-144)||(55766574-55766647)
chr4 (75-175)||(16911519-16911619)
chr4 (71-175)||(30639333-30639436)
chr4 (75-134)||(5313113-5313172)
chr4 (72-175)||(13256479-13256578)
chr4 (93-175)||(35567145-35567227)
chr4 (71-136)||(14590790-14590855)
chr4 (94-175)||(19027824-19027905)
chr4 (72-129)||(20405047-20405104)
chr4 (96-168)||(23580293-23580365)
chr4 (94-161)||(41549358-41549425)
chr4 (281-429)||(30828284-30828434)
chr4 (99-161)||(39077886-39077948)
chr4 (94-175)||(25343163-25343244)
chr4 (94-175)||(43035224-43035305)
chr4 (101-173)||(7385556-7385628)
chr4 (94-162)||(40915805-40915873)
chr4 (83-163)||(54640429-54640508)
chr4 (96-171)||(7227710-7227785)
chr4 (75-114)||(18969698-18969737)
chr4 (104-163)||(25463108-25463167)
chr4 (77-163)||(30352681-30352767)
chr4 (93-175)||(39029139-39029221)
chr4 (101-175)||(41018872-41018945)
chr4 (95-136)||(3580953-3580994)
chr4 (93-134)||(12257712-12257753)
chr4 (98-175)||(17043472-17043549)
chr4 (96-165)||(30690271-30690340)
chr4 (94-175)||(44363210-44363291)
chr4 (83-136)||(50856353-50856405)
[»] chr6 (25 HSPs)
chr6 (83-175)||(12221995-12222087)
chr6 (71-163)||(14975170-14975262)
chr6 (95-172)||(32728237-32728314)
chr6 (71-175)||(8409196-8409300)
chr6 (72-161)||(1346918-1347007)
chr6 (72-161)||(1354847-1354936)
chr6 (74-170)||(3815160-3815256)
chr6 (72-172)||(6024187-6024287)
chr6 (76-172)||(20400625-20400721)
chr6 (72-136)||(33922945-33923009)
chr6 (72-175)||(1941809-1941912)
chr6 (71-162)||(9161076-9161167)
chr6 (72-171)||(15866119-15866218)
chr6 (73-175)||(13905057-13905158)
chr6 (71-175)||(29355935-29356040)
chr6 (83-175)||(14553477-14553568)
chr6 (86-161)||(2166504-2166579)
chr6 (86-161)||(2178137-2178212)
chr6 (110-175)||(17448316-17448381)
chr6 (67-175)||(22967120-22967227)
chr6 (67-175)||(23821166-23821273)
chr6 (76-163)||(24734591-24734678)
chr6 (84-114)||(3116269-3116299)
chr6 (93-175)||(12889401-12889483)
chr6 (96-161)||(28007604-28007671)
[»] scaffold0057 (2 HSPs)
scaffold0057 (83-173)||(46796-46886)
scaffold0057 (71-136)||(24884-24949)
[»] scaffold0311 (1 HSPs)
scaffold0311 (83-175)||(10775-10867)
[»] scaffold0168 (1 HSPs)
scaffold0168 (72-161)||(30533-30622)
[»] scaffold0024 (1 HSPs)
scaffold0024 (71-144)||(83828-83901)
[»] scaffold0258 (1 HSPs)
scaffold0258 (74-162)||(13114-13202)
[»] scaffold0187 (4 HSPs)
scaffold0187 (69-136)||(8896-8963)
scaffold0187 (69-136)||(19224-19291)
scaffold0187 (75-161)||(10140-10226)
scaffold0187 (75-161)||(20468-20554)
[»] scaffold0005 (1 HSPs)
scaffold0005 (71-136)||(226523-226588)
[»] scaffold0254 (1 HSPs)
scaffold0254 (86-161)||(4125-4200)
[»] scaffold0049 (1 HSPs)
scaffold0049 (77-172)||(58936-59031)
[»] scaffold1176 (1 HSPs)
scaffold1176 (94-161)||(1677-1744)
[»] scaffold0223 (1 HSPs)
scaffold0223 (83-161)||(11097-11174)
[»] scaffold0036 (1 HSPs)
scaffold0036 (72-136)||(35135-35200)
[»] scaffold0116 (1 HSPs)
scaffold0116 (94-162)||(8867-8935)
[»] scaffold0031 (1 HSPs)
scaffold0031 (86-162)||(43097-43173)


Alignment Details
Target: chr7 (Bit Score: 169; Significance: 2e-90; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 7 - 215
Target Start/End: Original strand, 5814360 - 5814568
Alignment:
Q  7 tcgaagaatattgaacaattgaagcgttaatttccattttattaaaatcaagtatcttgaaatttgaggggtaactttggcgcaaccggtaaagttgttg 106  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| ||| || ||||||||| ||||||||||||||    
T  5814360 tcgaagcatattgaacaattgaagcgttaaattccattttattaaaatcaagtatcttgaaatctgagaggttaccttggcgcaatcggtaaagttgttg 5814459  T
Q  107 tcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaaggcttatttgaaagtagcatgagaatgtgggttca 206  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  5814460 ttatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaaggcttatttgaaagtagcataagaaagtgggttca 5814559  T
Q  207 aatcccatc 215  Q
    |||||||||    
T  5814560 aatcccatc 5814568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 279 - 451
Target Start/End: Original strand, 5814633 - 5814806
Alignment:
Q  279 gggtgtcgaaccagcaacatttagcatgttataacaccccctttccactcaacagctacaatttaattgataatatacatataatatggtatattagg-a 377  Q
    |||||| |||||| | ||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||||||| | ||||||||||| ||| |    
T  5814633 gggtgttgaaccaacgacatttagcatattataacaccccctttccactcagcagctacaatttgattgataatatacatcttatatggtatataaggaa 5814732  T
Q  378 aatttgggggatgatgtggtccccacggatctctgaagagatccgccgctgctgccataggtgtggtgcgattg 451  Q
    ||||||||||||||||||||||||  || |||||||||||||||||| ||||||||||||||||||||||||||    
T  5814733 aatttgggggatgatgtggtccccgtgggtctctgaagagatccgccactgctgccataggtgtggtgcgattg 5814806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 66 - 175
Target Start/End: Original strand, 46354142 - 46354251
Alignment:
Q  66 aaatttgaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaata 165  Q
    ||||| |||||||||| |||||||||| ||||||||||||||||||||||||||| |||||||||||||||  |||||| |||||||| ||||||||| |    
T  46354142 aaattagaggggtaaccttggcgcaactggtaaagttgttgtcatgtgattggaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaaaca 46354241  T
Q  166 gggtaaggct 175  Q
    ||||||||||    
T  46354242 gggtaaggct 46354251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 70 - 175
Target Start/End: Complemental strand, 2541203 - 2541097
Alignment:
Q  70 ttgaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaa-gtcacgggttcaagttttggaaagaacctcttatgtaaaaaataggg 168  Q
    |||||||||||| |||||||||| ||||||||||||||||||||| |||||| |||||||||||||||  |||||| | |||||| ||||||||| ||||    
T  2541203 ttgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacaggg 2541104  T
Q  169 taaggct 175  Q
    |||||||    
T  2541103 taaggct 2541097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 71 - 175
Target Start/End: Original strand, 42805477 - 42805581
Alignment:
Q  71 tgaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggta 170  Q
    ||||||||||| |||||| ||| ||||||||||||||||||||| ||||| |||||||||||||||  |||||| | |||||| ||||||||| ||||||    
T  42805477 tgaggggtaaccttggcgtaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggta 42805576  T
Q  171 aggct 175  Q
    |||||    
T  42805577 aggct 42805581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 72 - 175
Target Start/End: Original strand, 42798623 - 42798726
Alignment:
Q  72 gaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaa 171  Q
    |||||||||| |||||||||| ||||||||||||||||||||| ||||| ||||||||||||||| ||||||| |  ||||| ||||||||| | |||||    
T  42798623 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcttggaaacagtctcttgtgtaaaaaacaaggtaa 42798722  T
Q  172 ggct 175  Q
    ||||    
T  42798723 ggct 42798726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 447 - 508
Target Start/End: Original strand, 5814833 - 5814894
Alignment:
Q  447 gattgccctaggggattatctatctggaggtatttatgtcccacttatccaaatgatgttta 508  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5814833 gattgtcctaggggattatctatctggaggtatttatgtcccacttatccaaatgatgttta 5814894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 76 - 175
Target Start/End: Complemental strand, 14732999 - 14732900
Alignment:
Q  76 ggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaaggct 175  Q
    |||||| |||||||||| ||||||||||||||||||||| || ||||||| ||||||||||  |||||| | ||||  |||||||||| |||||||||||    
T  14732999 ggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaagtcatgggttcaagtcctggaaacagcctcccatgtaaaaaacagggtaaggct 14732900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 72 - 175
Target Start/End: Original strand, 47716413 - 47716516
Alignment:
Q  72 gaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaa 171  Q
    |||||||||| ||||| |||| || |||||||||| ||||||| ||||| |||||||||||||||  |||||| | |||||| ||||||||| |||||||    
T  47716413 gaggggtaaccttggcacaactggaaaagttgttgccatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaa 47716512  T
Q  172 ggct 175  Q
    ||||    
T  47716513 ggct 47716516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 71 - 161
Target Start/End: Complemental strand, 48735303 - 48735212
Alignment:
Q  71 tgaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagt-tttggaaagaacctcttatgtaaaa 161  Q
    ||||||||||| |||||||||| ||||||||||||||||||||| || || |||||||||||||||  ||||||| |||||||| |||||||    
T  48735303 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtccttggaaacaacctcttgtgtaaaa 48735212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 83 - 172
Target Start/End: Complemental strand, 19427059 - 19426970
Alignment:
Q  83 ttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaag 172  Q
    |||||||||| |||||||||||||||||||||  | || |||||||||||||||  |||||| | |||||| ||||||||||||||||||    
T  19427059 ttggcgcaactggtaaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaatagggtaag 19426970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 68 - 161
Target Start/End: Original strand, 32758211 - 32758304
Alignment:
Q  68 atttgaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaa 161  Q
    |||||||||||||| |||||||||| ||||||||||||||||||||| || || ||||| |||||||||  |||||| | |||||| |||||||    
T  32758211 atttgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaa 32758304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 72 - 175
Target Start/End: Original strand, 7193039 - 7193142
Alignment:
Q  72 gaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaa 171  Q
    |||||||||| |||||| |||  |||||||||||||||||||| || || |||||||||||||||  | |||| |||||||| |||||| |||| |||||    
T  7193039 gaggggtaaccttggcgtaacttgtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctcgaaacaacctcttgtgtaaacaatatggtaa 7193138  T
Q  172 ggct 175  Q
    ||||    
T  7193139 ggct 7193142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 85 - 172
Target Start/End: Complemental strand, 11617756 - 11617669
Alignment:
Q  85 ggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaag 172  Q
    |||||||| ||||||||||||||||||||| || || ||||| |||||||||  |||||| |||||||| ||||||||| ||||||||    
T  11617756 ggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaag 11617669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 72 - 175
Target Start/End: Original strand, 43557426 - 43557529
Alignment:
Q  72 gaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaa 171  Q
    |||||||||| ||| |||||| ||||||||||||||||||||| || || |||| ||||||||||  |||||| | |||||| ||||||||| || ||||    
T  43557426 gaggggtaaccttgccgcaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacagcctcttgtgtaaaaaacagagtaa 43557525  T
Q  172 ggct 175  Q
    ||||    
T  43557526 ggct 43557529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 77 - 163
Target Start/End: Complemental strand, 7794682 - 7794596
Alignment:
Q  77 gtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaa 163  Q
    ||||| || ||||||| |||||||||||||| |||||| ||||| |||||||||||||||  |||||| | ||||||||||||||||    
T  7794682 gtaaccttagcgcaactggtaaagttgttgttatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttatgtaaaaaa 7794596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 73 - 175
Target Start/End: Original strand, 18326989 - 18327090
Alignment:
Q  73 aggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaag 172  Q
    ||||||||| |||||||||| ||||||||||||||||||||| | ||| |||||||||||||||   ||||| | |||||| ||| ||||| ||||||||    
T  18326989 aggggtaaccttggcgcaactggtaaagttgttgtcatgtgacttgaaggtcacgggttcaagtcccggaaacagcctcttgtgt-aaaaacagggtaag 18327087  T
Q  173 gct 175  Q
    |||    
T  18327088 gct 18327090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 72 - 161
Target Start/End: Complemental strand, 21172188 - 21172099
Alignment:
Q  72 gaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaa 161  Q
    |||||||||| |||||||||| ||||||||||||||||||| | || || |||||||||||||||  |||||| | |||||| |||||||    
T  21172188 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtaactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa 21172099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 94 - 171
Target Start/End: Original strand, 22065564 - 22065640
Alignment:
Q  94 ggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaa 171  Q
    |||||||||||||||| ||||||| ||||||| | |||||||||||||||| |||||||| ||| |||||||||||||    
T  22065564 ggtaaagttgttgtcacgtgattgaaaagtcatgagttcaagttttggaaacaacctcttgtgt-aaaaatagggtaa 22065640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 72 - 161
Target Start/End: Complemental strand, 47078034 - 47077945
Alignment:
Q  72 gaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaa 161  Q
    |||||||||| |||||||||| ||||||||||||||||||||| || || |||||||||||||||  |||||| |  ||||| |||||||    
T  47078034 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagtctcttgtgtaaaa 47077945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 73 - 172
Target Start/End: Complemental strand, 5180337 - 5180238
Alignment:
Q  73 aggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaag 172  Q
    ||||||||| ||| |||||| ||||||||||||||||||||| || || |||| |||||||| || |||||| | |||||| ||| ||||| ||||||||    
T  5180337 aggggtaaccttgacgcaactggtaaagttgttgtcatgtgactgaaaggtcaagggttcaacttctggaaacagcctcttgtgtcaaaaacagggtaag 5180238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 72 - 163
Target Start/End: Original strand, 21447544 - 21447635
Alignment:
Q  72 gaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaa 163  Q
    |||||||||| |||||||||| | |||| |||||||||||| ||||||| ||||||| ||||||| ||| ||| | |||||| |||||||||    
T  21447544 gaggggtaaccttggcgcaactgataaatttgttgtcatgtaattggaaggtcacggattcaagtcttgaaaacagcctcttgtgtaaaaaa 21447635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 71 - 162
Target Start/End: Complemental strand, 42496017 - 42495926
Alignment:
Q  71 tgaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaa 162  Q
    ||||||||||| |||||||||| ||||||||||||||||| ||| || || |||||||||||||||  |||||| | |||||| | ||||||    
T  42496017 tgaggggtaaccttggcgcaactggtaaagttgttgtcatatgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaa 42495926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 71 - 173
Target Start/End: Original strand, 12473257 - 12473359
Alignment:
Q  71 tgaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggta 170  Q
    ||||||||| | ||||||||||||||||||||||||||||||   || || |||| ||||||||||  || ||| |||||||| ||| ||||| ||||||    
T  12473257 tgaggggtagccttggcgcaaccggtaaagttgttgtcatgtatctgaaaggtcatgggttcaagtcctgcaaacaacctcttgtgtcaaaaacagggta 12473356  T
Q  171 agg 173  Q
    |||    
T  12473357 agg 12473359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 83 - 173
Target Start/End: Original strand, 27629599 - 27629689
Alignment:
Q  83 ttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaagg 173  Q
    |||||||||| ||||||||||||||||| |||  | || |||||||||||||||  |||||| | |||||| ||||||||| |||||||||    
T  27629599 ttggcgcaactggtaaagttgttgtcatttgaccgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaagg 27629689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 78 - 136
Target Start/End: Original strand, 40463837 - 40463895
Alignment:
Q  78 taactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagt 136  Q
    |||| |||||||||||||||||||||||||||||||| || || |||||||||||||||    
T  40463837 taaccttggcgcaaccggtaaagttgttgtcatgtgactgtaaggtcacgggttcaagt 40463895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 73 - 173
Target Start/End: Complemental strand, 8149126 - 8149025
Alignment:
Q  73 aggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatg-taaaaaatagggtaa 171  Q
    ||||||||| ||||| |||| ||||| ||||||||||||||| || ||||||||| ||||||||  || |||  ||||||| || |||||||||||||||    
T  8149126 aggggtaaccttggcacaactggtaatgttgttgtcatgtgactgcaaagtcacgagttcaagtcctgaaaactacctcttgtgttaaaaaatagggtaa 8149027  T
Q  172 gg 173  Q
    ||    
T  8149026 gg 8149025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 71 - 136
Target Start/End: Complemental strand, 35334996 - 35334931
Alignment:
Q  71 tgaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagt 136  Q
    |||||| |||| |||||||||| ||||||||||||||||||||| ||||| |||||| ||||||||    
T  35334996 tgagggataaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgagttcaagt 35334931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 72 - 172
Target Start/End: Complemental strand, 22699151 - 22699051
Alignment:
Q  72 gaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaa 171  Q
    |||||||||| ||| |||||| ||||||||||||||||||||| || || || | ||||||||||  |||||| |  ||||| ||||||||| |||||||    
T  22699151 gaggggtaaccttgacgcaactggtaaagttgttgtcatgtgactgaaaggttatgggttcaagtcctggaaatagtctcttgtgtaaaaaacagggtaa 22699052  T
Q  172 g 172  Q
    |    
T  22699051 g 22699051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 83 - 175
Target Start/End: Complemental strand, 29140530 - 29140438
Alignment:
Q  83 ttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaaggct 175  Q
    |||||||||| ||||||||||||||||||| | || || |||||   ||||||||||| ||| || |||||| |||||||||| |||||||||    
T  29140530 ttggcgcaactggtaaagttgttgtcatgtaactgaaaggtcacacattcaagttttgaaaacaatctcttaggtaaaaaataaggtaaggct 29140438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 83 - 161
Target Start/End: Complemental strand, 10693241 - 10693163
Alignment:
Q  83 ttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaa 161  Q
    ||||||||||  |||||||||||||||||||| || || |||||||||||||||  |||||| | |||||| |||||||    
T  10693241 ttggcgcaactagtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa 10693163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 93 - 175
Target Start/End: Original strand, 16341253 - 16341335
Alignment:
Q  93 cggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaaggct 175  Q
    ||||||||||||| ||||||  ||| || |||||||||||||||| | |||| | |||||| ||||||||| |||||||||||    
T  16341253 cggtaaagttgttatcatgtatttgaaaggtcacgggttcaagttctagaaacagcctcttgtgtaaaaaacagggtaaggct 16341335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 71 - 161
Target Start/End: Original strand, 42476826 - 42476916
Alignment:
Q  71 tgaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaa 161  Q
    ||||||||||| |||||| ||| ||||||||||||||||||||| |  || ||||||| |||||||| |||||| |  ||||| |||||||    
T  42476826 tgaggggtaacattggcgtaactggtaaagttgttgtcatgtgactaaaaggtcacggattcaagttctggaaacagtctcttgtgtaaaa 42476916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 78 - 171
Target Start/End: Complemental strand, 1424085 - 1423992
Alignment:
Q  78 taactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaa 171  Q
    ||||||||||||||| |||||||||||||| |||||| ||||| ||||||| ||||| |  |||||| |  || || ||||||||| |||||||    
T  1424085 taactttggcgcaactggtaaagttgttgttatgtgactggaaggtcacggattcaaatcctggaaacagtctgttgtgtaaaaaacagggtaa 1423992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 83 - 172
Target Start/End: Complemental strand, 23419843 - 23419755
Alignment:
Q  83 ttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaag 172  Q
    |||||||||| |||||||||| |||||||||| |  || ||||| |||||||||| |||||| | |||||| ||||||||| ||||||||    
T  23419843 ttggcgcaac-ggtaaagttgctgtcatgtgactaaaaggtcacaggttcaagttctggaaacagcctcttgtgtaaaaaacagggtaag 23419755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 94 - 162
Target Start/End: Complemental strand, 33872068 - 33872000
Alignment:
Q  94 ggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaa 162  Q
    ||||||||||||||||||||| || || ||| |||||||||||  |||||| |||||||| ||||||||    
T  33872068 ggtaaagttgttgtcatgtgactgaaaggtcgcgggttcaagtcctggaaacaacctcttgtgtaaaaa 33872000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 71 - 175
Target Start/End: Complemental strand, 34626389 - 34626286
Alignment:
Q  71 tgaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggta 170  Q
    ||||||||||| || ||||||| |||||||||||||||||||||||| || | ||| | |||||||  |||||| | |||| | ||| ||||| ||||||    
T  34626389 tgaggggtaaccttagcgcaactggtaaagttgttgtcatgtgattgaaaggccacagattcaagtcctggaaacagcctcctgtgt-aaaaacagggta 34626291  T
Q  171 aggct 175  Q
    |||||    
T  34626290 aggct 34626286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 72 - 175
Target Start/End: Complemental strand, 2663112 - 2663013
Alignment:
Q  72 gaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaa 171  Q
    |||||||||| ||||||||||  ||||||||||||| |||||| |||  |||||  |||||||||  |||||| | |||||| |||  ||||||||||||    
T  2663112 gaggggtaaccttggcgcaactagtaaagttgttgttatgtgactgg--agtcataggttcaagtcctggaaacagcctcttgtgt--aaaatagggtaa 2663017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 71 - 136
Target Start/End: Complemental strand, 28078313 - 28078248
Alignment:
Q  71 tgaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagt 136  Q
    |||||||||||  |||||||||  || ||||||||||||||||| || || |||||||||||||||    
T  28078313 tgaggggtaaccctggcgcaactcgtgaagttgttgtcatgtgactgtaaggtcacgggttcaagt 28078248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 93 - 175
Target Start/End: Original strand, 29907392 - 29907476
Alignment:
Q  93 cggtaaagttgttgt--catgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaaggct 175  Q
    |||||||||||||||  ||||||| || || |||||||||||||||  | |||| | |||||| |||||||||||| ||||||||    
T  29907392 cggtaaagttgttgtatcatgtgactgaaaggtcacgggttcaagtcctagaaacagcctcttgtgtaaaaaatagtgtaaggct 29907476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 83 - 175
Target Start/End: Original strand, 19265781 - 19265871
Alignment:
Q  83 ttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaaggct 175  Q
    |||||||||| |||||||||||||||| |||| || || ||||||||||||||| ||||| | | || ||| ||| ||||| |||||||||||    
T  19265781 ttggcgcaac-ggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcttggatacagccgcttgtgt-aaaaagagggtaaggct 19265871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 94 - 172
Target Start/End: Original strand, 7644932 - 7645010
Alignment:
Q  94 ggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaag 172  Q
    |||||| ||||||| | |||| || || |||||||||||||||  |||||| | |||||| ||||||||| ||||||||    
T  7644932 ggtaaatttgttgtaacgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaag 7645010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 83 - 171
Target Start/End: Complemental strand, 48123653 - 48123566
Alignment:
Q  83 ttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaa 171  Q
    |||||||||| |||||||||||| |||||||  || || |||| ||||||||||  |||||| | |||||| |||||| || |||||||    
T  48123653 ttggcgcaac-ggtaaagttgttatcatgtgtctgaaaggtcatgggttcaagtcctggaaacagcctcttgtgtaaataacagggtaa 48123566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 70; Significance: 3e-31; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 66 - 175
Target Start/End: Original strand, 23974729 - 23974837
Alignment:
Q  66 aaatttgaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaata 165  Q
    |||||||||||||||| |||||||||| ||||||||||||||||||||| ||||| |||||||||||||||  |||||| |||||||| ||||||||| |    
T  23974729 aaatttgaggggtaaccttggcgcaac-ggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaaaga 23974827  T
Q  166 gggtaaggct 175  Q
    ||||||||||    
T  23974828 gggtaaggct 23974837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 72 - 175
Target Start/End: Original strand, 24448844 - 24448947
Alignment:
Q  72 gaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaa 171  Q
    |||||||||| |||||||||| ||||||||||||||||||||| ||||| |||||||||||||||  |||||| | ||| || |||||||||||||||||    
T  24448844 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagccttttgtgtaaaaaatagggtaa 24448943  T
Q  172 ggct 175  Q
    ||||    
T  24448944 ggct 24448947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 75 - 175
Target Start/End: Complemental strand, 4619284 - 4619184
Alignment:
Q  75 gggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaaggc 174  Q
    ||||||| |||||||||| ||||||||||||||||||||| ||||| |||||||||||||||  |||||| | |||||| ||||||||| ||||||||||    
T  4619284 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaatagcctcttgtgtaaaaaacagggtaaggc 4619185  T
Q  175 t 175  Q
    |    
T  4619184 t 4619184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 71 - 175
Target Start/End: Original strand, 38879534 - 38879638
Alignment:
Q  71 tgaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggta 170  Q
    ||||||||||| |||||||||| ||||||||||||||||||||| || || |||||||||||||||  |||||| | |||||| | ||||||| ||||||    
T  38879534 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaacagggta 38879633  T
Q  171 aggct 175  Q
    |||||    
T  38879634 aggct 38879638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 71 - 175
Target Start/End: Original strand, 41014272 - 41014375
Alignment:
Q  71 tgaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggta 170  Q
    ||||||||||| |||||||||| ||||||||||||||||||||| ||||| |||||||||||||||  |||||| | |||||| ||| ||||| ||||||    
T  41014272 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgt-aaaaacagggta 41014370  T
Q  171 aggct 175  Q
    |||||    
T  41014371 aggct 41014375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 75 - 175
Target Start/End: Complemental strand, 12006508 - 12006408
Alignment:
Q  75 gggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacggg-ttcaagttttggaaagaacctcttatgtaaaaaatagggtaagg 173  Q
    ||||| |||||||||||| | | ||||||||||||||||| || || |||||||| ||||||| | ||||| ||||||||||||||||||||||||||||    
T  12006508 gggtagctttggcgcaactgctcaagttgttgtcatgtgactgaaaggtcacggggttcaagtct-ggaaacaacctcttatgtaaaaaatagggtaagg 12006410  T
Q  174 ct 175  Q
    ||    
T  12006409 ct 12006408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 68 - 161
Target Start/End: Complemental strand, 37024739 - 37024646
Alignment:
Q  68 atttgaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaa 161  Q
    |||||||||||||| |||| ||||| ||||||||||||||||||||| || || |||||||||||||||  |||||| | |||||| |||||||    
T  37024739 atttgaggggtaaccttggtgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa 37024646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 72 - 175
Target Start/End: Original strand, 35710267 - 35710368
Alignment:
Q  72 gaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaa 171  Q
    |||||||||| |||||||||| ||||||||||||||||||| | || || |||||||||||||||  |||||| | |||||| |||  ||||||||||||    
T  35710267 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtaactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt--aaaatagggtaa 35710364  T
Q  172 ggct 175  Q
    ||||    
T  35710365 ggct 35710368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 72 - 163
Target Start/End: Original strand, 1565385 - 1565476
Alignment:
Q  72 gaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaa 163  Q
    |||||||||| |||||||||| ||||||||||||||||||||| || || ||| |||||||||||  |||||| ||||||||  ||||||||    
T  1565385 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcgcgggttcaagtcctggaaacaacctcttgagtaaaaaa 1565476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 75 - 175
Target Start/End: Original strand, 43334159 - 43334260
Alignment:
Q  75 gggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgt-aaaaaatagggtaagg 173  Q
    ||||||| |||||||||| ||||||||||||||||||||| || || |||||||||||||||  |||||| | |||| | ||| |||||| |||||||||    
T  43334159 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcctgtgtaaaaaaacagggtaagg 43334258  T
Q  174 ct 175  Q
    ||    
T  43334259 ct 43334260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 83 - 173
Target Start/End: Original strand, 39301089 - 39301178
Alignment:
Q  83 ttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaagg 173  Q
    |||||||||| ||||||||||||||||||| | || || ||||||||||||||| |||| || |||||||| |||| |||| |||||||||    
T  39301089 ttggcgcaac-ggtaaagttgttgtcatgttactgaaaggtcacgggttcaagtcttgggaacaacctcttgtgtataaaacagggtaagg 39301178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 70 - 163
Target Start/End: Original strand, 22187237 - 22187330
Alignment:
Q  70 ttgaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaa 163  Q
    |||||||||||||||||||||||  |||||||||||||||| ||| || || ||||| |||| ||||  |||||| | |||||| |||||||||    
T  22187237 ttgaggggtaactttggcgcaactagtaaagttgttgtcatttgactgaaaggtcaccggtttaagtcctggaaacagcctcttgtgtaaaaaa 22187330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 75 - 175
Target Start/End: Original strand, 27328709 - 27328809
Alignment:
Q  75 gggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaaggc 174  Q
    ||||||| ||| |||||  ||||||||||||||||||||| || || ||||| |||||||||  |||||| |  ||||| ||||||||| ||||||||||    
T  27328709 gggtaaccttgacgcaattggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagtctcttgtgtaaaaaacagggtaaggc 27328808  T
Q  175 t 175  Q
    |    
T  27328809 t 27328809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 101 - 172
Target Start/End: Original strand, 1405170 - 1405241
Alignment:
Q  101 ttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaag 172  Q
    |||||||||||||| | ||| |||||||||||||||  |||||| |||||||||| |||||||||| |||||    
T  1405170 ttgttgtcatgtgactagaaggtcacgggttcaagtcctggaaacaacctcttatataaaaaatagagtaag 1405241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 73 - 114
Target Start/End: Original strand, 2838733 - 2838774
Alignment:
Q  73 aggggtaactttggcgcaaccggtaaagttgttgtcatgtga 114  Q
    ||||||||| ||||||||||||||||||||||||||||||||    
T  2838733 aggggtaaccttggcgcaaccggtaaagttgttgtcatgtga 2838774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 72 - 161
Target Start/End: Complemental strand, 8170163 - 8170074
Alignment:
Q  72 gaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaa 161  Q
    ||||| |||| |||||||||| |||||||||||||||||||||  | || |||||||||||||||  |||||| | ||| || |||||||    
T  8170163 gagggctaaccttggcgcaactggtaaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaacagccttttgtgtaaaa 8170074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 70 - 175
Target Start/End: Original strand, 22600406 - 22600511
Alignment:
Q  70 ttgaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggt 169  Q
    |||||||||||| ||| || ||| |||||||||||| |||||||| ||||| || ||||||||||||  |||||| ||  | || ||||||| | |||||    
T  22600406 ttgaggggtaaccttgacgtaactggtaaagttgttatcatgtgactggaaggttacgggttcaagtcctggaaacaatattttgtgtaaaacacagggt 22600505  T
Q  170 aaggct 175  Q
    ||||||    
T  22600506 aaggct 22600511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 94 - 134
Target Start/End: Complemental strand, 31362494 - 31362454
Alignment:
Q  94 ggtaaagttgttgtcatgtgattggaaagtcacgggttcaa 134  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  31362494 ggtaaagttgttgtcatgtgattggaaggtcacgggttcaa 31362454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 93 - 163
Target Start/End: Complemental strand, 28516594 - 28516524
Alignment:
Q  93 cggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaa 163  Q
    ||||||||||||||||| |||  || || ||||||||||||||| ||||||| | |||||| |||||||||    
T  28516594 cggtaaagttgttgtcaggtggctgaaaggtcacgggttcaagtcttggaaacatcctcttgtgtaaaaaa 28516524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 83 - 144
Target Start/End: Complemental strand, 39079935 - 39079875
Alignment:
Q  83 ttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaa 144  Q
    |||||||||| |||||||||||||||||||||  | || ||||||||||||||| |||||||    
T  39079935 ttggcgcaac-ggtaaagttgttgtcatgtgacagaaaggtcacgggttcaagtcttggaaa 39079875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 71 - 110
Target Start/End: Original strand, 41956885 - 41956924
Alignment:
Q  71 tgaggggtaactttggcgcaaccggtaaagttgttgtcat 110  Q
    ||||||||||| |||||||||| |||||||||||||||||    
T  41956885 tgaggggtaacattggcgcaactggtaaagttgttgtcat 41956924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 72 - 110
Target Start/End: Original strand, 19438703 - 19438741
Alignment:
Q  72 gaggggtaactttggcgcaaccggtaaagttgttgtcat 110  Q
    |||||||||| |||||||||| |||||||||||||||||    
T  19438703 gaggggtaaccttggcgcaactggtaaagttgttgtcat 19438741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 75 - 136
Target Start/End: Complemental strand, 22861844 - 22861783
Alignment:
Q  75 gggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagt 136  Q
    ||||||| ||||| |||| | ||||||||||||||||||| || || ||||||| |||||||    
T  22861844 gggtaaccttggcacaactgataaagttgttgtcatgtgactgaaaggtcacggattcaagt 22861783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 122 - 175
Target Start/End: Original strand, 41425952 - 41426005
Alignment:
Q  122 gtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaaggct 175  Q
    |||||||||||||||| |||||| ||| | || ||||||||| |||||||||||    
T  41425952 gtcacgggttcaagttctggaaacaacttattgtgtaaaaaacagggtaaggct 41426005  T

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Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 162
Target Start/End: Original strand, 1850624 - 1850684
Alignment:
Q  102 tgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaa 162  Q
    ||||||||||||| || || |||||||||||||||   ||||| |||||||| ||||||||    
T  1850624 tgttgtcatgtgactgaaaggtcacgggttcaagtcccggaaataacctcttgtgtaaaaa 1850684  T

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Target: chr3 (Bit Score: 65; Significance: 2e-28; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 71 - 175
Target Start/End: Complemental strand, 40272994 - 40272890
Alignment:
Q  71 tgaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggta 170  Q
    ||||||||||| |||||||||| ||||||||||||||||||||| ||||| |||| ||||||||||  |||||| |||||||| ||||||||| ||||||    
T  40272994 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcatgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggta 40272895  T
Q  171 aggct 175  Q
    |||||    
T  40272894 aggct 40272890  T

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Target: chr3; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 72 - 175
Target Start/End: Complemental strand, 13730785 - 13730682
Alignment:
Q  72 gaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaa 171  Q
    |||||||||| |||||||||| ||||||||||||||||||||| ||||| |||||||||||||||  |||||| | |||||| ||||||||| |||||||    
T  13730785 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaa 13730686  T
Q  172 ggct 175  Q
    ||||    
T  13730685 ggct 13730682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 71 - 173
Target Start/End: Complemental strand, 8247871 - 8247769
Alignment:
Q  71 tgaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggta 170  Q
    ||||||||||| |||||||||| ||||||||||||||||||||| || || |||||||||||||||  |||||| | |||||| ||||||||| ||||||    
T  8247871 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggta 8247772  T
Q  171 agg 173  Q
    |||    
T  8247771 agg 8247769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 72 - 175
Target Start/End: Complemental strand, 46421218 - 46421115
Alignment:
Q  72 gaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaa 171  Q
    |||||||||| |||||||||| ||||||||||||||||||||| |  || |||||||||||||||  |||||| | |||||| ||||||||| |||||||    
T  46421218 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgacttaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaa 46421119  T
Q  172 ggct 175  Q
    ||||    
T  46421118 ggct 46421115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 72 - 175
Target Start/End: Complemental strand, 4495845 - 4495742
Alignment:
Q  72 gaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaa 171  Q
    |||||||||| || ||||||| ||||||||||||||||||||| ||||| |||||||||||||||  || ||| | ||| || ||||||||| |||||||    
T  4495845 gaggggtaaccttcgcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctgaaaatagcctattgtgtaaaaaacagggtaa 4495746  T
Q  172 ggct 175  Q
    ||||    
T  4495745 ggct 4495742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 72 - 175
Target Start/End: Complemental strand, 10870132 - 10870030
Alignment:
Q  72 gaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaa 171  Q
    |||||||||| |||||||||| ||||||||||||||||||||| || || |||||||||||||||  |||||| | |||||| ||| ||||| |||||||    
T  10870132 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt-aaaaacagggtaa 10870034  T
Q  172 ggct 175  Q
    ||||    
T  10870033 ggct 10870030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 72 - 158
Target Start/End: Complemental strand, 52926391 - 52926305
Alignment:
Q  72 gaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgta 158  Q
    |||||||||| |||||||||| ||||||||||||||||||||| ||||| |||||||||||||||  |||||| | |||||| ||||    
T  52926391 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgta 52926305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 70 - 175
Target Start/End: Original strand, 22609741 - 22609844
Alignment:
Q  70 ttgaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggt 169  Q
    |||||||||||| |||||||||| ||||||||||||||||||||| || || || |||||||||||| ||||||| | |||||| ||| ||||| |||||    
T  22609741 ttgaggggtaaccttggcgcaac-ggtaaagttgttgtcatgtgactgtaaggtaacgggttcaagtcttggaaacagcctcttgtgt-aaaaacagggt 22609838  T
Q  170 aaggct 175  Q
    ||||||    
T  22609839 aaggct 22609844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 69 - 162
Target Start/End: Complemental strand, 5173905 - 5173811
Alignment:
Q  69 tttgaggggtaactttggcgcaaccggtaaa-gttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaa 162  Q
    ||||||||||||| ||||||||||  ||||| ||||||||||||||| || || |||||||||||||||  |||||| |||||||| ||||||||    
T  5173905 tttgaggggtaaccttggcgcaactcgtaaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaa 5173811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 70 - 136
Target Start/End: Original strand, 16735415 - 16735481
Alignment:
Q  70 ttgaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagt 136  Q
    |||||||||||| |||||||||| ||||||||||||||||||||| || || |||||||||||||||    
T  16735415 ttgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagt 16735481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 73 - 175
Target Start/End: Complemental strand, 29366902 - 29366800
Alignment:
Q  73 aggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaag 172  Q
    ||||||||| |||||| ||| ||||||||||||||||||||| |  || |||||||||||||||  |||||| | |||||| | ||||||| ||||||||    
T  29366902 aggggtaaccttggcgtaactggtaaagttgttgtcatgtgactaaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaacagggtaag 29366803  T
Q  173 gct 175  Q
    |||    
T  29366802 gct 29366800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 71 - 175
Target Start/End: Complemental strand, 13628975 - 13628870
Alignment:
Q  71 tgaggggtaactttggcgcaaccggtaaa-gttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggt 169  Q
    ||||||||||| ||||| |||| |||||| ||||||||||||||| || || |||||||||||||||  |||||| | |||||| ||||| ||| |||||    
T  13628975 tgaggggtaaccttggcacaactggtaaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaagaaacagggt 13628876  T
Q  170 aaggct 175  Q
    ||||||    
T  13628875 aaggct 13628870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 71 - 175
Target Start/End: Original strand, 9607178 - 9607282
Alignment:
Q  71 tgaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggta 170  Q
    ||||||||||| ||||||||||  |||||||||||||||||||| || || ||||  |||||||||  |||||| | ||||||  |||||||| ||||||    
T  9607178 tgaggggtaaccttggcgcaacttgtaaagttgttgtcatgtgactgaaaggtcatcggttcaagtcctggaaacagcctcttgcgtaaaaaacagggta 9607277  T
Q  171 aggct 175  Q
    |||||    
T  9607278 aggct 9607282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 70 - 161
Target Start/End: Complemental strand, 7697068 - 7696977
Alignment:
Q  70 ttgaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaa 161  Q
    |||||||||||| |||||||||| ||||||||||||||||||||| |  || |||||||||||||||  |||||| |  ||||| |||||||    
T  7697068 ttgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactaaaaggtcacgggttcaagtcctggaaacagtctcttgtgtaaaa 7696977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 71 - 161
Target Start/End: Original strand, 1217065 - 1217155
Alignment:
Q  71 tgaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaa 161  Q
    ||||||||||| |||||||||| ||||||||||| ||||||| | || || |||||||||||||||  |||||| | |||||| |||||||    
T  1217065 tgaggggtaaccttggcgcaactggtaaagttgtagtcatgtcactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa 1217155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 72 - 174
Target Start/End: Complemental strand, 12914216 - 12914114
Alignment:
Q  72 gaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaa 171  Q
    |||||||||| |||||||||| |||||||||||||| ||||||  | || |||||  ||||||||  |||||| | |||||| ||||||||| |||||||    
T  12914216 gaggggtaaccttggcgcaactggtaaagttgttgtaatgtgaccgaaaggtcacaagttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaa 12914117  T
Q  172 ggc 174  Q
    |||    
T  12914116 ggc 12914114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 83 - 175
Target Start/End: Complemental strand, 45620998 - 45620906
Alignment:
Q  83 ttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgt-aaaaaatagggtaaggct 175  Q
    |||||||||| |||||||||||||||| |||| || || |||||||||||||||| |||||| | |||||| ||| |||||| |||||||||||    
T  45620998 ttggcgcaac-ggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagttctggaaacagcctcttgtgtaaaaaaacagggtaaggct 45620906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 83 - 175
Target Start/End: Original strand, 26573115 - 26573206
Alignment:
Q  83 ttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaaggct 175  Q
    |||||||||| |||||||||||||||| |||| || || |||||||||||||||  |||||| | |||| | ||||||||| |||||||||||    
T  26573115 ttggcgcaac-ggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacagcctcctgtgtaaaaaacagggtaaggct 26573206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 95 - 175
Target Start/End: Complemental strand, 34420802 - 34420722
Alignment:
Q  95 gtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaaggct 175  Q
    ||||||||||||||| |||| || || |||||||||||||||  |||||| | |||||| ||||||||| |||||||||||    
T  34420802 gtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggct 34420722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 107 - 175
Target Start/End: Complemental strand, 45139624 - 45139556
Alignment:
Q  107 tcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaaggct 175  Q
    |||||||| || || ||||||||||||||||||||||| |||||||| ||||||| | |||||||||||    
T  45139624 tcatgtgactgaaaggtcacgggttcaagttttggaaacaacctcttgtgtaaaacacagggtaaggct 45139556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 107 - 175
Target Start/End: Complemental strand, 54032705 - 54032637
Alignment:
Q  107 tcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaaggct 175  Q
    |||||||| ||||| |||||||||||||||  |||||| |||||||| ||||||||| |||||||||||    
T  54032705 tcatgtgactggaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaaggct 54032637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 93 - 175
Target Start/End: Complemental strand, 53996726 - 53996644
Alignment:
Q  93 cggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaaggct 175  Q
    ||||||| |||||||||| ||| || || |||||| ||||||||  |||||| |||||||| ||||||||| |||||||||||    
T  53996726 cggtaaatttgttgtcatttgactgaaaggtcacgtgttcaagtcgtggaaacaacctcttgtgtaaaaaacagggtaaggct 53996644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 71 - 144
Target Start/End: Original strand, 4537006 - 4537079
Alignment:
Q  71 tgaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaa 144  Q
    ||||||||||| |||||  || |||||| ||||| |||||||||||| || |||||||||| ||||||||||||    
T  4537006 tgaggggtaaccttggcataatcggtaatgttgtggtcatgtgattgaaaggtcacgggtttaagttttggaaa 4537079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 83 - 175
Target Start/End: Complemental strand, 45949010 - 45948916
Alignment:
Q  83 ttggcgcaaccggtaaagttgttgtcatgtgattg---gaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaaggct 175  Q
    |||||||||| ||| |||||||| |||||||| ||   ||| ||||||||||||| |  |||||| |||||||| |||||||||||||||||||||    
T  45949010 ttggcgcaac-ggtgaagttgttttcatgtgactgaaggaaggtcacgggttcaattcctggaaacaacctcttgtgtaaaaaatagggtaaggct 45948916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 122 - 175
Target Start/End: Complemental strand, 54374477 - 54374424
Alignment:
Q  122 gtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaaggct 175  Q
    ||||| ||||||||| ||||||| |||||||| |||||||||||||||||||||    
T  54374477 gtcacaggttcaagtcttggaaacaacctcttgtgtaaaaaatagggtaaggct 54374424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 75 - 171
Target Start/End: Original strand, 26782345 - 26782441
Alignment:
Q  75 gggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaa 171  Q
    ||||||| ||| |||||  ||||||||| |||||||| ||||| || ||||||| |||||||  | |||| || ||||| |||||||||||||||||    
T  26782345 gggtaaccttgacgcaattggtaaagttattgtcatgcgattgaaaggtcacggattcaagtccttgaaacaatctcttgtgtaaaaaatagggtaa 26782441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 104 - 175
Target Start/End: Original strand, 516417 - 516488
Alignment:
Q  104 ttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaaggct 175  Q
    ||||||||||| || || |||||||||||||||  |||||| | |||||| ||||||||| |||||||||||    
T  516417 ttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggct 516488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 72 - 175
Target Start/End: Complemental strand, 6412002 - 6411900
Alignment:
Q  72 gaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaa 171  Q
    |||||||||| ||| |||||| ||||||||||||||||||| | ||  | |||| |||||||||| ||| ||| | |||||| ||| ||||| |||||||    
T  6412002 gaggggtaaccttgacgcaactggtaaagttgttgtcatgtaactgataggtcatgggttcaagtcttgtaaacagcctcttgtgt-aaaaacagggtaa 6411904  T
Q  172 ggct 175  Q
    ||||    
T  6411903 ggct 6411900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 85 - 175
Target Start/End: Original strand, 26869696 - 26869785
Alignment:
Q  85 ggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaaggct 175  Q
    |||||||| ||||||||||||||||||||| || || ||||| |||||||||  |||||| | |||||  ||| ||||| |||||||||||    
T  26869696 ggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagcctctggtgt-aaaaacagggtaaggct 26869785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 71 - 161
Target Start/End: Original strand, 39203491 - 39203581
Alignment:
Q  71 tgaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaa 161  Q
    ||||||||||| ||||| ||||  |||||||||||||||||||| || || ||||| |||||||||  | |||| | |||||| |||||||    
T  39203491 tgaggggtaaccttggcacaacttgtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtccttgaaacagcctcttgtgtaaaa 39203581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 73 - 126
Target Start/End: Complemental strand, 25517353 - 25517300
Alignment:
Q  73 aggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcac 126  Q
    |||| |||| |||||||||| ||||||||||||||||||||| ||||| |||||    
T  25517353 agggataaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcac 25517300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 178 - 214
Target Start/End: Complemental strand, 1609991 - 1609955
Alignment:
Q  178 tttgaaagtagcatgagaatgtgggttcaaatcccat 214  Q
    ||||||||||||| |||||||||||||||||||||||    
T  1609991 tttgaaagtagcacgagaatgtgggttcaaatcccat 1609955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 93 - 173
Target Start/End: Complemental strand, 30928307 - 30928227
Alignment:
Q  93 cggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaagg 173  Q
    |||| ||||| ||||||||||| || || |||||||||||||||  |||||| | |||||| ||||||||| | |||||||    
T  30928307 cggtcaagttcttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacaaggtaagg 30928227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 71 - 175
Target Start/End: Original strand, 12525385 - 12525486
Alignment:
Q  71 tgaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggta 170  Q
    ||||||||||| |||||||||| ||||||   |||||||| ||| || || ||||| ||||| |||  |||||| | |||||| ||||||||  ||||||    
T  12525385 tgaggggtaaccttggcgcaactggtaaa---gttgtcatatgactgaaaggtcacaggttcgagtcctggaaacagcctcttgtgtaaaaatcagggta 12525481  T
Q  171 aggct 175  Q
    |||||    
T  12525482 aggct 12525486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 99 - 172
Target Start/End: Original strand, 7942993 - 7943066
Alignment:
Q  99 agttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaag 172  Q
    |||||||||||||||| ||||| ||||||| |||||||  |||||| | | |||| | ||||||| ||||||||    
T  7942993 agttgttgtcatgtgactggaaggtcacggattcaagtcctggaaacagcatcttgtctaaaaaacagggtaag 7943066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 161
Target Start/End: Complemental strand, 22123092 - 22123007
Alignment:
Q  76 ggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaa 161  Q
    |||||| ||||||| || |||||| |||||||||||||| || || ||| |||||||||||  |||||| |  ||||| |||||||    
T  22123092 ggtaaccttggcgccactggtaaatttgttgtcatgtgactgaaaggtcgcgggttcaagtcctggaaacagtctcttgtgtaaaa 22123007  T

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Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 93 - 170
Target Start/End: Original strand, 53062035 - 53062112
Alignment:
Q  93 cggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggta 170  Q
    |||||||||||||||||||||| || || |||||| ||||||||  |||||| | |||| | ||| ||||| ||||||    
T  53062035 cggtaaagttgttgtcatgtgactgaaaggtcacgtgttcaagtcctggaaacagcctcctgtgtcaaaaacagggta 53062112  T

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Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 71 - 111
Target Start/End: Original strand, 9276249 - 9276289
Alignment:
Q  71 tgaggggtaactttggcgcaaccggtaaagttgttgtcatg 111  Q
    ||||||||||| ||||||||||  |||||||||||||||||    
T  9276249 tgaggggtaaccttggcgcaactagtaaagttgttgtcatg 9276289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 81 - 173
Target Start/End: Original strand, 29106535 - 29106626
Alignment:
Q  81 ctttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaagg 173  Q
    |||||||||||| ||||||  ||||||||||||  |  ||  |||||||| ||||| ||| ||| |||||||| ||||||||||||| |||||    
T  29106535 ctttggcgcaac-ggtaaaaatgttgtcatgtggctcaaagatcacgggtacaagtcttgaaaacaacctcttgtgtaaaaaataggataagg 29106626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 64; Significance: 1e-27; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 68 - 175
Target Start/End: Complemental strand, 28817811 - 28817704
Alignment:
Q  68 atttgaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagg 167  Q
    |||||||||||||| |||| ||||| ||||||||||||||||||||| ||||| |||||||||||||||  |||||| | |||||| ||||||||| |||    
T  28817811 atttgaggggtaaccttggtgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagg 28817712  T
Q  168 gtaaggct 175  Q
    ||||||||    
T  28817711 gtaaggct 28817704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 72 - 175
Target Start/End: Original strand, 44530103 - 44530206
Alignment:
Q  72 gaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaa 171  Q
    |||||||||| |||||||||| |||||||||| |||||||||| | ||| ||||||||||||||| ||||||| |||||||| ||||||||| |||||||    
T  44530103 gaggggtaaccttggcgcaactggtaaagttgctgtcatgtgactagaaggtcacgggttcaagtcttggaaacaacctcttgtgtaaaaaacagggtaa 44530202  T
Q  172 ggct 175  Q
    ||||    
T  44530203 ggct 44530206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 69 - 175
Target Start/End: Original strand, 36720747 - 36720853
Alignment:
Q  69 tttgaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaataggg 168  Q
    ||||||||||||| |||||| ||| ||||||||||||||||||||| ||||| |||||||||||||||  |||||| | |||||| ||||||||| ||||    
T  36720747 tttgaggggtaaccttggcgtaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacaggg 36720846  T
Q  169 taaggct 175  Q
    |||||||    
T  36720847 taaggct 36720853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 72 - 175
Target Start/End: Complemental strand, 7136710 - 7136607
Alignment:
Q  72 gaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaa 171  Q
    |||||||||| |||||||||| ||||||||||||||||||||| ||||| |||| ||||||||||  |||||| |||||||| ||||||||  |||||||    
T  7136710 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcatgggttcaagtcctggaaacaacctcttgtgtaaaaaccagggtaa 7136611  T
Q  172 ggct 175  Q
    ||||    
T  7136610 ggct 7136607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 71 - 176
Target Start/End: Original strand, 6760776 - 6760880
Alignment:
Q  71 tgaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggta 170  Q
    ||||||||||||| |||||||| ||||||||||||||||| ||| | ||| |||||||||||||||  |||||| | |||||| ||||||||| ||||||    
T  6760776 tgaggggtaactt-ggcgcaactggtaaagttgttgtcatatgactagaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggta 6760874  T
Q  171 aggctt 176  Q
    ||||||    
T  6760875 aggctt 6760880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 72 - 173
Target Start/End: Original strand, 35261633 - 35261734
Alignment:
Q  72 gaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaa 171  Q
    |||||||||| |||||||||| ||||||||||||||||||||| ||||| ||||||||||||||   |||||| |  ||||| ||||||||| |||||||    
T  35261633 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagccctggaaacagtctcttgtgtaaaaaacagggtaa 35261732  T
Q  172 gg 173  Q
    ||    
T  35261733 gg 35261734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 72 - 175
Target Start/End: Original strand, 26954086 - 26954190
Alignment:
Q  72 gaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgt-aaaaaatagggta 170  Q
    ||||||||||||||||| ||  ||||||||||||||||||||||| ||| |||||||||||||||  |||||| | |||||| ||| |||||| ||||||    
T  26954086 gaggggtaactttggcgtaattggtaaagttgttgtcatgtgattagaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaaacagggta 26954185  T
Q  171 aggct 175  Q
    |||||    
T  26954186 aggct 26954190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 71 - 175
Target Start/End: Complemental strand, 39461178 - 39461074
Alignment:
Q  71 tgaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggta 170  Q
    ||||||||||| |||||||||| |||||||||||||||||| || || || |||||||||||||||  |||||| | |||||| ||||||||| || |||    
T  39461178 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgagactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagagta 39461079  T
Q  171 aggct 175  Q
    |||||    
T  39461078 aggct 39461074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 72 - 175
Target Start/End: Complemental strand, 29521866 - 29521763
Alignment:
Q  72 gaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaa 171  Q
    |||||||||| |||||||||| | ||||||||||||| ||||| ||||| |||||||||||||||  |||||| | |||||| | ||||||| |||||||    
T  29521866 gaggggtaaccttggcgcaactgataaagttgttgtcgtgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtttaaaaaacagggtaa 29521767  T
Q  172 ggct 175  Q
    ||||    
T  29521766 ggct 29521763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 70 - 161
Target Start/End: Complemental strand, 30454278 - 30454187
Alignment:
Q  70 ttgaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaa 161  Q
    |||||||||||| |||||||||| ||||||||||||||||||||| || || |||||||||||||||  |||||| | |||||| |||||||    
T  30454278 ttgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa 30454187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 72 - 175
Target Start/End: Original strand, 45071219 - 45071321
Alignment:
Q  72 gaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaa 171  Q
    |||||||||| ||||||  || |||||||||||||||||||||||| || |||||||||||||||| |||||| | |||||| ||| ||||| |||||||    
T  45071219 gaggggtaaccttggcgatactggtaaagttgttgtcatgtgattgtaaggtcacgggttcaagttctggaaacagcctcttgtgt-aaaaacagggtaa 45071317  T
Q  172 ggct 175  Q
    ||||    
T  45071318 ggct 45071321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 72 - 161
Target Start/End: Complemental strand, 12670429 - 12670340
Alignment:
Q  72 gaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaa 161  Q
    |||||||||| |||||||||| ||||||||||||||||||||| || || |||||||||||||||  |||||| | |||||| |||||||    
T  12670429 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa 12670340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 70 - 162
Target Start/End: Complemental strand, 18164942 - 18164850
Alignment:
Q  70 ttgaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaa 162  Q
    |||||||||||  |||||||||||||| ||||||||||||||||| || || |||||||||||||||  |||||| | |||||| ||||||||    
T  18164942 ttgaggggtaatcttggcgcaaccggtgaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaa 18164850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 73 - 172
Target Start/End: Original strand, 11748254 - 11748353
Alignment:
Q  73 aggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaag 172  Q
    |||||||||||||| ||||| ||| || |||||||||||||| || || ||||||||||||||| ||||||| | |||||| ||||||||  ||||||||    
T  11748254 aggggtaactttggtgcaactggtgaaattgttgtcatgtgactgaaatgtcacgggttcaagtcttggaaacagcctcttttgtaaaaagcagggtaag 11748353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 28407381 - 28407460
Alignment:
Q  83 ttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaa 162  Q
    |||||||||| ||||||||||||||||||||| ||||| |||||||||||||||  |||||| | |||||| ||||||||    
T  28407381 ttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaa 28407460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 71 - 173
Target Start/End: Complemental strand, 40605087 - 40604985
Alignment:
Q  71 tgaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggta 170  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||   | | ||||||||||  |||||| || || || |||||||||| || ||    
T  40605087 tgaggggtaactttggcgcaactggtaaagttgttgtcatgtgattggatgattatgggttcaagtcatggaaacaatcttttgtgtaaaaaattggata 40604988  T
Q  171 agg 173  Q
    |||    
T  40604987 agg 40604985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 69 - 162
Target Start/End: Original strand, 17823527 - 17823620
Alignment:
Q  69 tttgaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaa 162  Q
    ||||||||||||  |||||||||| |||||||||||||||||||||  | || |||||||||||||||  |||||| | |||||| ||||||||    
T  17823527 tttgaggggtaatcttggcgcaactggtaaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaa 17823620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 72 - 161
Target Start/End: Complemental strand, 20869677 - 20869588
Alignment:
Q  72 gaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaa 161  Q
    ||||| |||| |||||||||| ||||||||||||||||||||| || || |||||||||||||||  |||||| | |||||| |||||||    
T  20869677 gagggataaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa 20869588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 71 - 163
Target Start/End: Original strand, 2626472 - 2626564
Alignment:
Q  71 tgaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaa 163  Q
    ||||||||||| |||||||||  |||||||||||||||||||||  | || |||||||||||||||  |||||| | |||||| |||||||||    
T  2626472 tgaggggtaaccttggcgcaattggtaaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaa 2626564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 71 - 175
Target Start/End: Original strand, 13160655 - 13160758
Alignment:
Q  71 tgaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggta 170  Q
    ||||||||||| | |||||||| ||||||||||||||||||||| || || |||||||||||||||  | |||| | |||||| ||| ||||| ||||||    
T  13160655 tgaggggtaacctcggcgcaactggtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcttgtgt-aaaaacagggta 13160753  T
Q  171 aggct 175  Q
    |||||    
T  13160754 aggct 13160758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 71 - 175
Target Start/End: Original strand, 25250475 - 25250579
Alignment:
Q  71 tgaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggta 170  Q
    |||| |||||| ||||| |||| ||||||||||||||||||||| ||||| |||||  ||||||||  |||||| | ||| || ||||||||||||||||    
T  25250475 tgagaggtaaccttggcacaactggtaaagttgttgtcatgtgactggaaggtcacatgttcaagtcctggaaacagcctattgtgtaaaaaatagggta 25250574  T
Q  171 aggct 175  Q
     ||||    
T  25250575 tggct 25250579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 84 - 175
Target Start/End: Complemental strand, 8897933 - 8897842
Alignment:
Q  84 tggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaaggct 175  Q
    |||| |||| |||||||||||||||||||||  | || |||||||||| ||||  |||||| |||| ||| |||||||||||||||||||||    
T  8897933 tggcacaactggtaaagttgttgtcatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggct 8897842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 67 - 163
Target Start/End: Complemental strand, 20284259 - 20284163
Alignment:
Q  67 aatttgaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaa 163  Q
    |||| ||| |||||| ||| |||||| ||||||||||||||||||||| || || |||||||||||||||  |||||| | |||||| | |||||||    
T  20284259 aattagagcggtaaccttgacgcaacgggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaa 20284163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 67 - 163
Target Start/End: Complemental strand, 21070888 - 21070792
Alignment:
Q  67 aatttgaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaa 163  Q
    |||| ||| |||||| ||| |||||| ||||||||||||||||||||| || || |||||||||||||||  |||||| | |||||| | |||||||    
T  21070888 aattagagcggtaaccttgacgcaacgggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaa 21070792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 72 - 136
Target Start/End: Original strand, 24245405 - 24245469
Alignment:
Q  72 gaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagt 136  Q
    |||||||||| |||| ||||| ||||||||||||||||||||| || || |||||||||||||||    
T  24245405 gaggggtaaccttggggcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagt 24245469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 83 - 175
Target Start/End: Complemental strand, 30962942 - 30962851
Alignment:
Q  83 ttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaaggct 175  Q
    |||||||||| || ||||||||||||||||||||| || ||||||  |||||||  |||||| | |||||| ||||||||||||||| |||||    
T  30962942 ttggcgcaac-ggaaaagttgttgtcatgtgattgaaaggtcacgacttcaagtcctggaaacagcctcttgtgtaaaaaatagggttaggct 30962851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 83 - 175
Target Start/End: Complemental strand, 44781675 - 44781584
Alignment:
Q  83 ttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaaggct 175  Q
    |||||||||| |||||||||||||||| |||| || ||  ||||||||||||||  |||||| |||||||| ||||||| | |||||||||||    
T  44781675 ttggcgcaac-ggtaaagttgttgtcacgtgactgaaagttcacgggttcaagtcctggaaacaacctcttgtgtaaaagacagggtaaggct 44781584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 93 - 175
Target Start/End: Original strand, 22598132 - 22598214
Alignment:
Q  93 cggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaaggct 175  Q
    |||||||||||||||||  ||| || || ||||||||||||| |  |||||| |||||||| ||||||||| |||||||||||    
T  22598132 cggtaaagttgttgtcacatgactgaaaggtcacgggttcaaatcctggaaacaacctcttgtgtaaaaaacagggtaaggct 22598214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 93 - 175
Target Start/End: Complemental strand, 44742679 - 44742597
Alignment:
Q  93 cggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaaggct 175  Q
    ||||||||||||||||  ||||||| || |||| | ||||||||| |||||| || ||| | ||||||||| |||||||||||    
T  44742679 cggtaaagttgttgtcgcgtgattgtaaggtcatgagttcaagttctggaaacaatctcctgtgtaaaaaacagggtaaggct 44742597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 12625858 - 12625934
Alignment:
Q  87 cgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaa 163  Q
    |||||| ||||||||||||||| ||||| | | | |||||||| ||||||  |||||| |||||||| |||||||||    
T  12625858 cgcaactggtaaagttgttgtcgtgtgacttgtaggtcacgggctcaagtcctggaaacaacctcttgtgtaaaaaa 12625934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 83 - 175
Target Start/End: Complemental strand, 42083868 - 42083777
Alignment:
Q  83 ttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaaggct 175  Q
    |||||||||| |||||| ||||||||| |||| || || |||||||||||||||  |||||| | ||| || |||||||||| ||| ||||||    
T  42083868 ttggcgcaac-ggtaaaattgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacagccttttgtgtaaaaaatggggcaaggct 42083777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 71 - 114
Target Start/End: Complemental strand, 23286475 - 23286432
Alignment:
Q  71 tgaggggtaactttggcgcaaccggtaaagttgttgtcatgtga 114  Q
    ||||||||||| ||| |||||| |||||||||||||||||||||    
T  23286475 tgaggggtaaccttgtcgcaactggtaaagttgttgtcatgtga 23286432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 279 - 424
Target Start/End: Original strand, 24643793 - 24643938
Alignment:
Q  279 gggtgtcgaaccagcaacatttagcatgttataacaccccctttcca-ctcaacagctacaatttaattgataatatacatataatatggtatattagg- 376  Q
    |||||| |||||||||||||||| ||| ||||  || |||||||||| | |  |||| ||||| | ||| |||| || ||| ||||||||||||| |||     
T  24643793 gggtgttgaaccagcaacatttaacatattatggca-cccctttccaccacggcagccacaatctgattaataaaatgcatctaatatggtatataagga 24643891  T
Q  377 aaatttgggggatgatgtggtccccacggatctctgaagagatccgcc 424  Q
    |||| | ||||||| ||||| ||||| || ||||||||||||||||||    
T  24643892 aaatcttggggatgttgtgg-ccccaagggtctctgaagagatccgcc 24643938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 93 - 163
Target Start/End: Complemental strand, 11001110 - 11001040
Alignment:
Q  93 cggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaa 163  Q
    ||||||||||||||||||||||||| || ||| ||||||||| || || ||| |||||  | |||||||||    
T  11001110 cggtaaagttgttgtcatgtgattgaaaggtcgcgggttcaaattctgaaaacaacctactgtgtaaaaaa 11001040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 97 - 175
Target Start/End: Original strand, 35105902 - 35105980
Alignment:
Q  97 aaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaaggct 175  Q
    ||||||||||||| |||  || || |||||||||||||||  |||||| |||||||| ||||||| | || ||||||||    
T  35105902 aaagttgttgtcacgtggctgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaagagagtgtaaggct 35105980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 175
Target Start/End: Complemental strand, 24365218 - 24365137
Alignment:
Q  95 gtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaat-agggtaaggct 175  Q
    |||||||||||||||||||| |  || ||||||||||||||   | |||| | |||||| |||||||||| |||||||||||    
T  24365218 gtaaagttgttgtcatgtgactaaaatgtcacgggttcaagccctagaaacagcctcttgtgtaaaaaatcagggtaaggct 24365137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 74 - 126
Target Start/End: Original strand, 31454144 - 31454196
Alignment:
Q  74 ggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcac 126  Q
    |||||||  ||||||||||||||| ||||||||||||||| ||| || |||||    
T  31454144 ggggtaatcttggcgcaaccggtatagttgttgtcatgtggttgaaaggtcac 31454196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 64; Significance: 1e-27; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 72 - 175
Target Start/End: Original strand, 46991781 - 46991884
Alignment:
Q  72 gaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaa 171  Q
    |||||||||| |||| ||||| ||||||||||||||||||||| ||||| |||||||||||||||  |||||| |||||||| ||||||||| |||||||    
T  46991781 gaggggtaaccttggtgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaa 46991880  T
Q  172 ggct 175  Q
    ||||    
T  46991881 ggct 46991884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 72 - 172
Target Start/End: Complemental strand, 46248134 - 46248034
Alignment:
Q  72 gaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaa 171  Q
    |||||||||| ||||| |||| ||||||||||||||||||||| || || ||||||||||||||| ||||||| | |||||| ||||||||| |||||||    
T  46248134 gaggggtaaccttggctcaactggtaaagttgttgtcatgtgactgaaatgtcacgggttcaagtcttggaaacagcctcttgtgtaaaaaacagggtaa 46248035  T
Q  172 g 172  Q
    |    
T  46248034 g 46248034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 94 - 175
Target Start/End: Original strand, 6925099 - 6925180
Alignment:
Q  94 ggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaaggct 175  Q
    ||||||||||||||||||||| ||||| |||||||||||||||  |||||| | |||||| |||||||||||||||||||||    
T  6925099 ggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaatagcctcttgtgtaaaaaatagggtaaggct 6925180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 72 - 175
Target Start/End: Original strand, 18944620 - 18944723
Alignment:
Q  72 gaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaa 171  Q
    |||||||||| |||||||||| ||||||||||||||||||||| || || ||||| ||||||||   |||||| | |||||| ||||||||| |||||||    
T  18944620 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaaggcctggaaacagcctcttgtgtaaaaaacagggtaa 18944719  T
Q  172 ggct 175  Q
    ||||    
T  18944720 ggct 18944723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 72 - 175
Target Start/End: Complemental strand, 20004273 - 20004170
Alignment:
Q  72 gaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaa 171  Q
    |||||||||| |||| ||||| ||||||||||||||||||||| ||||| |||||||||||||||  |||||| | |||||  ||||||||| | |||||    
T  20004273 gaggggtaaccttggtgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctctcgtgtaaaaaacaaggtaa 20004174  T
Q  172 ggct 175  Q
    ||||    
T  20004173 ggct 20004170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 71 - 173
Target Start/End: Original strand, 14617014 - 14617116
Alignment:
Q  71 tgaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggta 170  Q
    ||||||||||| |||||||||||||||||||||||||||||||| || || |||||| ||||||||  |||||| | |||||| |||||| || | ||||    
T  14617014 tgaggggtaaccttggcgcaaccggtaaagttgttgtcatgtgactgaaaggtcacgagttcaagtcctggaaacagcctcttgtgtaaataacaaggta 14617113  T
Q  171 agg 173  Q
    |||    
T  14617114 agg 14617116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 70 - 136
Target Start/End: Original strand, 34714598 - 34714664
Alignment:
Q  70 ttgaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagt 136  Q
    |||||||||||| |||||||||| |||||||||||||||||||||||| || |||||||||||||||    
T  34714598 ttgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgattgaaaggtcacgggttcaagt 34714664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 71 - 161
Target Start/End: Complemental strand, 34725278 - 34725188
Alignment:
Q  71 tgaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaa 161  Q
    ||||||||||| |||||||||| ||||||||||||||||||||| || || |||||||||||||||  |||||| | |||||| |||||||    
T  34725278 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa 34725188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 78 - 175
Target Start/End: Complemental strand, 30395903 - 30395806
Alignment:
Q  78 taactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaaggct 175  Q
    |||| |||||||||| ||||||||||||||||||||| |  || |||||||||||||||  |||||| | |||||| ||||||||| |||||||||||    
T  30395903 taaccttggcgcaactggtaaagttgttgtcatgtgactttaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggct 30395806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 83 - 175
Target Start/End: Complemental strand, 18724714 - 18724623
Alignment:
Q  83 ttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaaggct 175  Q
    |||||||||| ||||||||||||||||||||| || || |||||||||||||||  |||||| | |||||| ||||||||| |||||||||||    
T  18724714 ttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggct 18724623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 73 - 173
Target Start/End: Original strand, 24564322 - 24564422
Alignment:
Q  73 aggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaag 172  Q
    ||||||||| ||||||||||| ||||||||| |||| |||||||| || ||| | | ||||||| ||||||| |||||||| ||||||||| ||||||||    
T  24564322 aggggtaaccttggcgcaaccagtaaagttgatgtcttgtgattgaaaggtcgcagattcaagtcttggaaacaacctcttgtgtaaaaaacagggtaag 24564421  T
Q  173 g 173  Q
    |    
T  24564422 g 24564422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 72 - 136
Target Start/End: Original strand, 47214488 - 47214552
Alignment:
Q  72 gaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagt 136  Q
    ||||||||||||||||||||| ||||||||||||||||||||| || || |||||||||||||||    
T  47214488 gaggggtaactttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagt 47214552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 72 - 175
Target Start/End: Complemental strand, 32632737 - 32632635
Alignment:
Q  72 gaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaa 171  Q
    |||||||||| |||||||||| ||||||||||||||||| ||| || || |||||||||||||||  |||||| | |||||| ||| ||||| |||||||    
T  32632737 gaggggtaaccttggcgcaactggtaaagttgttgtcatatgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt-aaaaacagggtaa 32632639  T
Q  172 ggct 175  Q
    ||||    
T  32632638 ggct 32632635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 75 - 174
Target Start/End: Original strand, 25290143 - 25290244
Alignment:
Q  75 gggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaa--agaacctcttatgtaaaaaatagggtaag 172  Q
    ||||||| |||||||||| ||||||||||||||||||||| || || |||||| |||||||| ||||||  | | |||||| ||||||||| ||||||||    
T  25290143 gggtaaccttggcgcaacaggtaaagttgttgtcatgtgactgaaaggtcacgtgttcaagtcttggaaacacagcctcttgtgtaaaaaacagggtaag 25290242  T
Q  173 gc 174  Q
    ||    
T  25290243 gc 25290244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 83 - 175
Target Start/End: Original strand, 22327088 - 22327179
Alignment:
Q  83 ttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaaggct 175  Q
    |||||||||| || |||||||||||||||||| || || ||| |||||||||||  |||||| |||||||| ||||||||| |||||||||||    
T  22327088 ttggcgcaac-ggcaaagttgttgtcatgtgactgaaaggtcgcgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaaggct 22327179  T

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Target: chr1; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 87 - 175
Target Start/End: Complemental strand, 23768486 - 23768398
Alignment:
Q  87 cgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaaggct 175  Q
    |||||| ||||||||||||||||||||| || || ||||| |||||||||  |||||| | |||||| ||||||||| |||||||||||    
T  23768486 cgcaactggtaaagttgttgtcatgtgactgtaaggtcacaggttcaagtcatggaaacagcctcttgtgtaaaaaacagggtaaggct 23768398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 72 - 173
Target Start/End: Original strand, 10668197 - 10668303
Alignment:
Q  72 gaggggtaactttggcgcaaccggtaaagttgttgtcatgtgat-----tggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatag 166  Q
    |||||||||| |||||||||| ||||||||||||||||||||||     || || |||||||||||||||  |||||| | |||||| ||||||||| |     
T  10668197 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacaa 10668296  T
Q  167 ggtaagg 173  Q
    |||||||    
T  10668297 ggtaagg 10668303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 72 - 162
Target Start/End: Complemental strand, 22930248 - 22930158
Alignment:
Q  72 gaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaa 162  Q
    |||||||||| |||||||||| ||||||||||||||||||||| || || |||| ||||||||||  |||||| | ||| || ||||||||    
T  22930248 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacagccttttgtgtaaaaa 22930158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 95 - 173
Target Start/End: Complemental strand, 25468421 - 25468343
Alignment:
Q  95 gtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaagg 173  Q
    ||||||||||||||||||||||| || |||| ||||||||||  |||||| |||||||| ||||||||  |||||||||    
T  25468421 gtaaagttgttgtcatgtgattgaaaggtcatgggttcaagtcctggaaacaacctcttgtgtaaaaatcagggtaagg 25468343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 65 - 175
Target Start/End: Complemental strand, 41319994 - 41319884
Alignment:
Q  65 gaaatttgaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaat 164  Q
    |||| |||||||||||| ||| | |||| ||||||||||||||||||||| || || ||||| |||| ||||  |||||| |  ||||| |||||||||     
T  41319994 gaaaattgaggggtaaccttgacacaactggtaaagttgttgtcatgtgactgaaaggtcacaggtttaagtcctggaaacagtctcttgtgtaaaaaac 41319895  T
Q  165 agggtaaggct 175  Q
    |||||||||||    
T  41319894 agggtaaggct 41319884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 71 - 175
Target Start/End: Complemental strand, 19932934 - 19932833
Alignment:
Q  71 tgaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggta 170  Q
    |||||||| || |||||||||| ||||||||||||||||||||| || || |||| |||||||||  ||||| | ||||| || ||||||||| ||||||    
T  19932934 tgaggggttaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaag--ttggatacaacct-ttgtgtaaaaaacagggta 19932838  T
Q  171 aggct 175  Q
    |||||    
T  19932837 aggct 19932833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 77 - 162
Target Start/End: Original strand, 45402077 - 45402161
Alignment:
Q  77 gtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaa 162  Q
    ||||| |||||||||| ||||||||||||||||||||| ||||| || ||||||||||||  |||||| | |||||| ||||||||    
T  45402077 gtaaccttggcgcaactggtaaagttgttgtcatgtga-tggaaggtaacgggttcaagtcctggaaacagcctcttgtgtaaaaa 45402161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 71 - 175
Target Start/End: Original strand, 8197019 - 8197123
Alignment:
Q  71 tgaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggta 170  Q
    ||||||||||| |||| ||||| ||| ||||||||||||||||| || || |||||||||||||||  ||| ||   |||||| ||||||||| | ||||    
T  8197019 tgaggggtaaccttggtgcaactggtcaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggtaattgcctcttgtgtaaaaaacatggta 8197118  T
Q  171 aggct 175  Q
    |||||    
T  8197119 aggct 8197123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 93 - 173
Target Start/End: Complemental strand, 27136812 - 27136732
Alignment:
Q  93 cggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaagg 173  Q
    ||||||||||||||||| |||||||||| | |||| ||||||||| ||| || |||||||| ||||||||| | |||||||    
T  27136812 cggtaaagttgttgtcacgtgattggaaggacacgagttcaagttctgggaacaacctcttgtgtaaaaaacatggtaagg 27136732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 71 - 162
Target Start/End: Original strand, 27474257 - 27474348
Alignment:
Q  71 tgaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaa 162  Q
    ||||||||||| || || |||| ||||||||||||||||||||| || || ||||| ||||||||| ||||||| |  ||||| ||||||||    
T  27474257 tgaggggtaaccttagctcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcttggaaacagtctcttgtgtaaaaa 27474348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 33222972 - 33223051
Alignment:
Q  83 ttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaa 162  Q
    |||||||||||||||||||||||||||||||| || || ||||||| || ||||  |||||| | |||||| ||||||||    
T  33222972 ttggcgcaaccggtaaagttgttgtcatgtgactgaaaggtcacggatttaagtcatggaaacagcctcttgtgtaaaaa 33223051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 93 - 175
Target Start/End: Complemental strand, 35117928 - 35117846
Alignment:
Q  93 cggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaaggct 175  Q
    ||||||||||||||||| |||| || || |||||||||||||||  |||||| | |||||| ||||||| | |||||||||||    
T  35117928 cggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaatagcctcttgtgtaaaatacagggtaaggct 35117846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 74 - 136
Target Start/End: Original strand, 40424721 - 40424783
Alignment:
Q  74 ggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagt 136  Q
    |||||||| |||||||||| ||||||||||||||||||||| || || | |||||||||||||    
T  40424721 ggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggccacgggttcaagt 40424783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 83 - 172
Target Start/End: Complemental strand, 2435956 - 2435868
Alignment:
Q  83 ttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaag 172  Q
    |||||||||| |||||||||||||||| |||| || || |||||||||||||||  |||||| | |||| | ||| ||||||||||||||    
T  2435956 ttggcgcaac-ggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacagcctcctgtgtgaaaaatagggtaag 2435868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 83 - 172
Target Start/End: Complemental strand, 4430196 - 4430107
Alignment:
Q  83 ttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaag 172  Q
    |||||||| | ||||||||||||||||||||| ||||| |||||||||| |||| ||| ||| |   |||| ||||||||| ||||||||    
T  4430196 ttggcgcagctggtaaagttgttgtcatgtgactggaaggtcacgggtttaagtcttgaaaacagtatcttgtgtaaaaaacagggtaag 4430107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 76 - 161
Target Start/End: Original strand, 19414420 - 19414505
Alignment:
Q  76 ggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaa 161  Q
    |||||| |||||| ||  ||||||||||||||||| ||| || || |||||||||||||||  | |||||| ||||||||||||||    
T  19414420 ggtaaccttggcgtaattggtaaagttgttgtcatatgactgaaaggtcacgggttcaagtcctagaaagagcctcttatgtaaaa 19414505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 72 - 161
Target Start/End: Complemental strand, 38478461 - 38478372
Alignment:
Q  72 gaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaa 161  Q
    |||||||||| ||||||||||  ||||| |||||||||||||| || || |||||||||||||||  | |||| | |||||| |||||||    
T  38478461 gaggggtaaccttggcgcaactagtaaacttgttgtcatgtgactgaaaggtcacgggttcaagtcctagaaacagcctcttgtgtaaaa 38478372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 93 - 165
Target Start/End: Complemental strand, 2436053 - 2435981
Alignment:
Q  93 cggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaata 165  Q
    ||||||||||||||||| |||| || || |||||||||||||||  |||||| |||||| | |||||||||||    
T  2436053 cggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacaacctcctgtgtaaaaaata 2435981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 9939443 - 9939519
Alignment:
Q  78 taactttggcgcaaccggtaaa-gttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctctt 153  Q
    |||| ||||||||||||||||| ||||||||||||||| || || |||||| ||||||||  |||||| ||||||||    
T  9939443 taaccttggcgcaaccggtaaaagttgttgtcatgtgactgaaaggtcacgagttcaagtcctggaaacaacctctt 9939519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 71 - 175
Target Start/End: Original strand, 27201623 - 27201727
Alignment:
Q  71 tgaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggta 170  Q
    ||||||||||| || ||| ||  ||||||||||||||||||||| || || |||| ||||||||||  |||||| | |||||| ||| | ||| ||||||    
T  27201623 tgaggggtaaccttagcgtaaatggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacagcctcttgtgtcagaaacagggta 27201722  T
Q  171 aggct 175  Q
    |||||    
T  27201723 aggct 27201727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 72 - 136
Target Start/End: Complemental strand, 45812716 - 45812652
Alignment:
Q  72 gaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagt 136  Q
    |||||||||| |||||||||| | ||||||||||||||||||| || || ||||| |||||||||    
T  45812716 gaggggtaaccttggcgcaactgataaagttgttgtcatgtgactgaaaggtcacaggttcaagt 45812652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 78 - 161
Target Start/End: Complemental strand, 12127010 - 12126927
Alignment:
Q  78 taactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaa 161  Q
    |||| ||||||||||  |||||||||||||||||| |||| || |||||||||| ||||| |||||| | | |||| |||||||    
T  12127010 taaccttggcgcaactcgtaaagttgttgtcatgtaattgaaaggtcacgggtttaagttctggaaacagcttcttgtgtaaaa 12126927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 94 - 160
Target Start/End: Original strand, 20036219 - 20036285
Alignment:
Q  94 ggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaa 160  Q
    ||||||||||||||||||||| || || |||||||||||||||  |||||| || ||||| ||||||    
T  20036219 ggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacaaactcttgtgtaaa 20036285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 93 - 163
Target Start/End: Original strand, 52910215 - 52910285
Alignment:
Q  93 cggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaa 163  Q
    |||||||||||||||||||||| || || ||||| ||||||| | ||||||| | ||||||| ||||||||    
T  52910215 cggtaaagttgttgtcatgtgactgaaaggtcacaggttcaactcttggaaacagcctcttaggtaaaaaa 52910285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 72 - 165
Target Start/End: Original strand, 10163736 - 10163829
Alignment:
Q  72 gaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaata 165  Q
    |||||||||| |||||||||| | ||||||||||||||||||  |  || || ||  ||| ||||| || ||| ||||||||||||||||||||    
T  10163736 gaggggtaacattggcgcaactgataaagttgttgtcatgtggctaaaatgttacaagtttaagttctgaaaacaacctcttatgtaaaaaata 10163829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 18742137 - 18742080
Alignment:
Q  77 gtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaa 134  Q
    ||||| |||||||||| ||||||||||||||||||||| || || |||| ||||||||    
T  18742137 gtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcaagggttcaa 18742080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 70 - 159
Target Start/End: Original strand, 22151479 - 22151568
Alignment:
Q  70 ttgaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaa 159  Q
    ||||||| ||| ||| ||||||| | ||||||||||||||| ||| || || ||||  |||||||||| |||||| | ||||||||||||    
T  22151479 ttgagggataattttagcgcaactgataaagttgttgtcatctgactgtaaggtcataggttcaagttctggaaacagcctcttatgtaa 22151568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 83 - 175
Target Start/End: Original strand, 11596502 - 11596592
Alignment:
Q  83 ttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaaggct 175  Q
    |||||||||| |||||||| | |||||||||| || || |||||||||||||||  | |||| |||||||| ||| ||||| |||||||||||    
T  11596502 ttggcgcaac-ggtaaagtggctgtcatgtgactgaaatgtcacgggttcaagtcctagaaacaacctcttgtgt-aaaaacagggtaaggct 11596592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 95 - 175
Target Start/End: Complemental strand, 44485267 - 44485187
Alignment:
Q  95 gtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaaggct 175  Q
    ||||||||||||||||||||||| || ||||||||||  |||  |||||| |||| ||| ||||||| | | |||||||||    
T  44485267 gtaaagttgttgtcatgtgattgaaaggtcacgggttatagtcctggaaacaaccacttgtgtaaaagacatggtaaggct 44485187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 93 - 175
Target Start/End: Complemental strand, 17470506 - 17470424
Alignment:
Q  93 cggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaaggct 175  Q
    ||||||||||||||||| |||| || |  |||| ||||||||||  | |||| | |||||| ||||||||| |||||||||||    
T  17470506 cggtaaagttgttgtcacgtgactgaatggtcatgggttcaagtcctagaaacagcctcttgtgtaaaaaacagggtaaggct 17470424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 122 - 175
Target Start/End: Original strand, 35005150 - 35005203
Alignment:
Q  122 gtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaaggct 175  Q
    ||||||||||||||| ||| ||| | |||||| ||||||||| |||||||||||    
T  35005150 gtcacgggttcaagtcttgaaaacagcctcttgtgtaaaaaacagggtaaggct 35005203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 178 - 214
Target Start/End: Original strand, 14876895 - 14876931
Alignment:
Q  178 tttgaaagtagcatgagaatgtgggttcaaatcccat 214  Q
    |||||| ||||||||||||||||||||||| ||||||    
T  14876895 tttgaatgtagcatgagaatgtgggttcaattcccat 14876931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 62; Significance: 1e-26; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 70 - 163
Target Start/End: Complemental strand, 25079901 - 25079808
Alignment:
Q  70 ttgaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaa 163  Q
    |||||||||||| |||||||||| ||||||||||||||||||||| ||||| ||||||||||||||| || |||| |||||||| |||||||||    
T  25079901 ttgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcttagaaacaacctcttgtgtaaaaaa 25079808  T

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Target: chr2; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 72 - 175
Target Start/End: Complemental strand, 8455497 - 8455394
Alignment:
Q  72 gaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaa 171  Q
    |||||||||| |||||||||| ||||||||||||||||||||| ||||| |||||||||||||||  |||||| | |||||| ||||||| | |||||||    
T  8455497 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaacacagggtaa 8455398  T
Q  172 ggct 175  Q
    ||||    
T  8455397 ggct 8455394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 69 - 175
Target Start/End: Original strand, 14530269 - 14530375
Alignment:
Q  69 tttgaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaataggg 168  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||| || || |||||||||||||||  |||||| | |||||| | ||||||| ||||    
T  14530269 tttgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaacaggg 14530368  T
Q  169 taaggct 175  Q
    |||||||    
T  14530369 taaggct 14530375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 89 - 175
Target Start/End: Original strand, 17667973 - 17668059
Alignment:
Q  89 caaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaaggct 175  Q
    |||| ||||||||||||||||||||| ||||| |||||||||||||||  ||||||||||||||| ||||||||  |||||||||||    
T  17667973 caactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaagaacctcttgtgtaaaaatcagggtaaggct 17668059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 73 - 175
Target Start/End: Complemental strand, 24200805 - 24200703
Alignment:
Q  73 aggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaag 172  Q
    ||||||||| |||  ||||| ||||||||||||||||||||| || ||||||||||||||||||  |||||| | |||||| ||||||||| ||||||||    
T  24200805 aggggtaaccttgatgcaactggtaaagttgttgtcatgtgactgaaaagtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaag 24200706  T
Q  173 gct 175  Q
    |||    
T  24200705 gct 24200703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 72 - 175
Target Start/End: Original strand, 7214488 - 7214591
Alignment:
Q  72 gaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaa 171  Q
    |||||||||||||||| |||| ||||||||||||||||||||| || || |||| |||||||||| ||||||| |  ||||| ||||||| | |||||||    
T  7214488 gaggggtaactttggcacaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcttggaaacagtctcttgtgtaaaatacagggtaa 7214587  T
Q  172 ggct 175  Q
    ||||    
T  7214588 ggct 7214591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 67 - 161
Target Start/End: Original strand, 9671129 - 9671224
Alignment:
Q  67 aatttgaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaa-gtcacgggttcaagttttggaaagaacctcttatgtaaaa 161  Q
    |||| |||||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||||||| |  |||||| | |||||| |||||||    
T  9671129 aattcgaggggtaaccttggcgcaaccggtaaagttgttgtcatgtgactggaaatgtcacgggttcaaatcctggaaacagcctcttgtgtaaaa 9671224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 72 - 175
Target Start/End: Complemental strand, 12024099 - 12023997
Alignment:
Q  72 gaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaa 171  Q
    |||||||||| |||||||||| ||||||||||||||||||||| || || |||||||||||||||  |||||| | |||||| ||| ||||| |||||||    
T  12024099 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt-aaaaacagggtaa 12024001  T
Q  172 ggct 175  Q
    ||||    
T  12024000 ggct 12023997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 73 - 175
Target Start/End: Original strand, 10543653 - 10543755
Alignment:
Q  73 aggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaag 172  Q
    ||||||||| |||||||||| | ||||||||||||||||||| || || |||||||||||||||  ||||||   |||||| ||||||||| ||||||||    
T  10543653 aggggtaaccttggcgcaactgataaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacggcctcttgtgtaaaaaacagggtaag 10543752  T
Q  173 gct 175  Q
    |||    
T  10543753 gct 10543755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 74 - 163
Target Start/End: Original strand, 11514392 - 11514481
Alignment:
Q  74 ggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaa 163  Q
    |||||||| |||||||||| ||||||||||||||||||||| ||||| ||||||||||||| |  |||||| | |||||| |||||||||    
T  11514392 ggggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaactcctggaaacagcctcttgtgtaaaaaa 11514481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 74 - 173
Target Start/End: Complemental strand, 19977893 - 19977794
Alignment:
Q  74 ggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaagg 173  Q
    |||||||| |||||| ||| ||| |||||||||||||||||  | || |||||||||||||||| |||||| | |||||| ||||||||||||| |||||    
T  19977893 ggggtaaccttggcggaactggtgaagttgttgtcatgtgaccgaaaggtcacgggttcaagttctggaaacagcctcttttgtaaaaaataggataagg 19977794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 72 - 173
Target Start/End: Original strand, 5840982 - 5841083
Alignment:
Q  72 gaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaa 171  Q
    |||||||||| |||| ||||  | ||||||||||||||||||| ||||| |||||||||||||||  | |||| | ||| || |||||||||||||||||    
T  5840982 gaggggtaaccttggtgcaaatgataaagttgttgtcatgtgactggaaggtcacgggttcaagtcctagaaacagccttttgtgtaaaaaatagggtaa 5841081  T
Q  172 gg 173  Q
    ||    
T  5841082 gg 5841083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 71 - 175
Target Start/End: Original strand, 23397719 - 23397821
Alignment:
Q  71 tgaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggta 170  Q
    ||||||||||| |||| ||||| ||||||||||||||||||||| || || |||| ||||||||||  |||||| | |||||| |||  |||||||||||    
T  23397719 tgaggggtaaccttggtgcaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacagcctcttgtgt--aaaatagggta 23397816  T
Q  171 aggct 175  Q
    |||||    
T  23397817 aggct 23397821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 94 - 175
Target Start/End: Complemental strand, 40417030 - 40416949
Alignment:
Q  94 ggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaaggct 175  Q
    ||||||||||||||||||||| ||||| |||||||||||||||  |||||| |||||||| | ||||||| |||| ||||||    
T  40417030 ggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcatggaaacaacctcttgtataaaaaacagggaaaggct 40416949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 72 - 175
Target Start/End: Original strand, 17705449 - 17705552
Alignment:
Q  72 gaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaa 171  Q
    |||||||||| |||| ||||| ||||||||||||||||||||| | ||| |||||||||||||||  ||||||   |||||| |||||| || || ||||    
T  17705449 gaggggtaaccttggtgcaactggtaaagttgttgtcatgtgactagaaggtcacgggttcaagtcctggaaaccgcctcttgtgtaaacaacagagtaa 17705548  T
Q  172 ggct 175  Q
    ||||    
T  17705549 ggct 17705552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 84 - 163
Target Start/End: Complemental strand, 39914475 - 39914396
Alignment:
Q  84 tggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaa 163  Q
    ||||||| | ||||||||||||||||||||| ||||| |||||||| ||||||  |||||| |||||||| |||||||||    
T  39914475 tggcgcatctggtaaagttgttgtcatgtgactggaaggtcacgggatcaagtactggaaacaacctcttgtgtaaaaaa 39914396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 89 - 175
Target Start/End: Original strand, 17623535 - 17623621
Alignment:
Q  89 caaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaaggct 175  Q
    |||| |||||||||||||||||| || ||||| |||||||||||||||  | |||| |||||||| ||||||||  |||||||||||    
T  17623535 caactggtaaagttgttgtcatgcgactggaaggtcacgggttcaagtcctcgaaacaacctcttgtgtaaaaatcagggtaaggct 17623621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 74 - 175
Target Start/End: Original strand, 17896215 - 17896317
Alignment:
Q  74 ggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgt-aaaaaatagggtaag 172  Q
    |||||||| ||| |||||| |||||||||||||||||||||  | || ||||||| |||||||  | |||| |||||||| ||| |||||||||||||||    
T  17896215 ggggtaaccttgacgcaactggtaaagttgttgtcatgtgaccgaaaggtcacggattcaagtcctagaaacaacctcttgtgtaaaaaaatagggtaag 17896314  T
Q  173 gct 175  Q
    |||    
T  17896315 gct 17896317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 71 - 161
Target Start/End: Complemental strand, 21779441 - 21779351
Alignment:
Q  71 tgaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaa 161  Q
    ||||||||||| |||||||||| ||| ||||||||||||||||| || || |||||||||||||||  |||| | | |||||| |||||||    
T  21779441 tgaggggtaaccttggcgcaactggtgaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggagacagcctcttgtgtaaaa 21779351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 93 - 175
Target Start/End: Original strand, 33795260 - 33795342
Alignment:
Q  93 cggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaaggct 175  Q
    ||||||||||||||||| ||||||| || |||||||||||||||   ||||| ||||||||  |||||||| |||||||||||    
T  33795260 cggtaaagttgttgtcacgtgattgaaaggtcacgggttcaagtcccggaaacaacctcttgggtaaaaaacagggtaaggct 33795342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 71 - 136
Target Start/End: Original strand, 22371010 - 22371075
Alignment:
Q  71 tgaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagt 136  Q
    ||||||||||| ||||| |||| ||||||||||||||||||||| ||| | |||||||||||||||    
T  22371010 tgaggggtaaccttggcccaactggtaaagttgttgtcatgtgactgggaggtcacgggttcaagt 22371075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 96 - 162
Target Start/End: Original strand, 44604832 - 44604898
Alignment:
Q  96 taaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaa 162  Q
    ||||||||||||||||||| ||||| ||||| |||||||||  |||||| |||||||| ||||||||    
T  44604832 taaagttgttgtcatgtgactggaaggtcacaggttcaagtcctggaaacaacctcttgtgtaaaaa 44604898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 75 - 136
Target Start/End: Complemental strand, 25249915 - 25249854
Alignment:
Q  75 gggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagt 136  Q
    ||||||| |||||||||  ||||||||||||||||||||| || || |||||||||||||||    
T  25249915 gggtaaccttggcgcaattggtaaagttgttgtcatgtgactgtaaggtcacgggttcaagt 25249854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 72 - 117
Target Start/End: Complemental strand, 26684803 - 26684758
Alignment:
Q  72 gaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattg 117  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||||    
T  26684803 gaggggtaactttagcgcaactggtaaagttgttgtcatgtgattg 26684758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 70 - 114
Target Start/End: Complemental strand, 39189604 - 39189560
Alignment:
Q  70 ttgaggggtaactttggcgcaaccggtaaagttgttgtcatgtga 114  Q
    |||||||||||| |||||||||| |||||||||||||||||||||    
T  39189604 ttgaggggtaaccttggcgcaactggtaaagttgttgtcatgtga 39189560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 96 - 163
Target Start/End: Original strand, 5450263 - 5450330
Alignment:
Q  96 taaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaa 163  Q
    ||||||||||||||||||| || || ||||||||||||| |  |||||| |||||||| |||||||||    
T  5450263 taaagttgttgtcatgtgactgaaaggtcacgggttcaattcctggaaacaacctcttgtgtaaaaaa 5450330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 346 - 424
Target Start/End: Complemental strand, 6590191 - 6590112
Alignment:
Q  346 tgataatatacatataatatggtatattaggaaatt-tgggggatgatgtggtccccacggatctctgaagagatccgcc 424  Q
    |||||| |||||| ||||||||||||| || ||| | ||||||||| ||||| ||||| || ||||||||||||||||||    
T  6590191 tgataaaatacatctaatatggtatataagtaaaatctgggggatgctgtggcccccaggggtctctgaagagatccgcc 6590112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 93 - 172
Target Start/End: Complemental strand, 29420049 - 29419970
Alignment:
Q  93 cggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaag 172  Q
    |||||||||||||||||  ||| || || |||||| ||||||||  |||||| |||||||| ||||||||| ||||||||    
T  29420049 cggtaaagttgttgtcacatgactgaaaggtcacgagttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaag 29419970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 93 - 175
Target Start/End: Complemental strand, 21377233 - 21377151
Alignment:
Q  93 cggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaaggct 175  Q
    |||||||||||||||||||||| || || || ||| ||||||||  | |||| | |||||| ||||||||| |||||||||||    
T  21377233 cggtaaagttgttgtcatgtgactgaaaggttacgagttcaagtcatagaaacatcctcttgtgtaaaaaacagggtaaggct 21377151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 178 - 215
Target Start/End: Original strand, 38575677 - 38575714
Alignment:
Q  178 tttgaaagtagcatgagaatgtgggttcaaatcccatc 215  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  38575677 tttgaaagtagcaagagaatgtgggttcaaatcccatc 38575714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 17380391 - 17380331
Alignment:
Q  98 aagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgta 158  Q
    |||||||||||||||||  | || ||||||||||||||| ||||||| |||||||| ||||    
T  17380391 aagttgttgtcatgtgaccgaaaggtcacgggttcaagtcttggaaacaacctcttgtgta 17380331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 83 - 162
Target Start/End: Complemental strand, 24860156 - 24860077
Alignment:
Q  83 ttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaa 162  Q
    |||||||||| |||||| |||||||||||||| ||||| || ||||||| |||   |||||| |||||||  ||||||||    
T  24860156 ttggcgcaactggtaaaattgttgtcatgtgactggaaggttacgggtttaagccctggaaacaacctctggtgtaaaaa 24860077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 72 - 114
Target Start/End: Complemental strand, 27466311 - 27466269
Alignment:
Q  72 gaggggtaactttggcgcaaccggtaaagttgttgtcatgtga 114  Q
    |||| ||||| |||||||||| |||||||||||||||||||||    
T  27466311 gaggcgtaacattggcgcaactggtaaagttgttgtcatgtga 27466269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 78 - 136
Target Start/End: Original strand, 27573581 - 27573639
Alignment:
Q  78 taactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagt 136  Q
    |||| |||||||||| ||||||||||||||||||||| || || ||||  |||||||||    
T  27573581 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcattggttcaagt 27573639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 93 - 175
Target Start/End: Complemental strand, 44521533 - 44521451
Alignment:
Q  93 cggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaaggct 175  Q
    ||||||||||||| ||| |||| || || |||||| |||||| | ||||||| || ||||| ||||||||| | |||||||||    
T  44521533 cggtaaagttgttatcacgtgactgaaaggtcacgcgttcaaatcttggaaacaatctcttgtgtaaaaaacaaggtaaggct 44521451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 73 - 114
Target Start/End: Original strand, 14544018 - 14544059
Alignment:
Q  73 aggggtaactttggcgcaaccggtaaagttgttgtcatgtga 114  Q
    ||||||||| |||||||||  |||||||||||||||||||||    
T  14544018 aggggtaaccttggcgcaattggtaaagttgttgtcatgtga 14544059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 88 - 144
Target Start/End: Complemental strand, 15896406 - 15896350
Alignment:
Q  88 gcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaa 144  Q
    ||||| |||||| |||||||||||||||||||| |||| | ||| |||| |||||||    
T  15896406 gcaactggtaaaattgttgtcatgtgattggaatgtcaagagttgaagtcttggaaa 15896350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 60; Significance: 2e-25; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 72 - 175
Target Start/End: Original strand, 21646918 - 21647021
Alignment:
Q  72 gaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaa 171  Q
    ||||| |||| |||||||||| ||||||||||||||||||||| ||||| ||||| |||||||||  |||||| | |||||| |||||||||||||||||    
T  21646918 gagggataaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaaaatagggtaa 21647017  T
Q  172 ggct 175  Q
    ||||    
T  21647018 ggct 21647021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 72 - 175
Target Start/End: Original strand, 10660358 - 10660461
Alignment:
Q  72 gaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaa 171  Q
    |||||||||| |||||||||| ||||||||||||||||||||| || || || ||  ||||||||  |||||| |||||||||||||||||||||||||     
T  10660358 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggttacatgttcaagtcctggaaacaacctcttatgtaaaaaatagggtat 10660457  T
Q  172 ggct 175  Q
    ||||    
T  10660458 ggct 10660461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 72 - 175
Target Start/End: Original strand, 10874503 - 10874606
Alignment:
Q  72 gaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaa 171  Q
    |||||||||| |||||||||| ||||||||||||||||||||| || || || ||  ||||||||  |||||| |||||||||||||||||||||||||     
T  10874503 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggttacatgttcaagtcctggaaacaacctcttatgtaaaaaatagggtat 10874602  T
Q  172 ggct 175  Q
    ||||    
T  10874603 ggct 10874606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 70 - 175
Target Start/End: Complemental strand, 6430808 - 6430704
Alignment:
Q  70 ttgaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggt 169  Q
    |||||||||||| |||||||||| ||||||||||||||||||||| || || |||||||||||||||  |||||| | |||||| ||| ||||| |||||    
T  6430808 ttgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcatggaaacagcctcttgtgt-aaaaacagggt 6430710  T
Q  170 aaggct 175  Q
    ||||||    
T  6430709 aaggct 6430704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 83 - 172
Target Start/End: Complemental strand, 16408773 - 16408684
Alignment:
Q  83 ttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaag 172  Q
    |||||||||| ||||||||||||||||||||| ||||| |||||||||||||||  |||||| | |||||| ||||||||| ||||||||    
T  16408773 ttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaag 16408684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 71 - 175
Target Start/End: Original strand, 5648212 - 5648315
Alignment:
Q  71 tgaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggta 170  Q
    ||||||||||| |||||||||| ||||||||||||||||||||| || || |||||||||||||||  |||||| | |||||| ||| ||||| ||||||    
T  5648212 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctggaaacagcctcttgtgt-aaaaacagggta 5648310  T
Q  171 aggct 175  Q
    |||||    
T  5648311 aggct 5648315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 69 - 161
Target Start/End: Original strand, 20224935 - 20225027
Alignment:
Q  69 tttgaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaa 161  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||| || || |||| ||||||||||  |||||| |||||||| |||||||    
T  20224935 tttgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacaacctcttgtgtaaaa 20225027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 73 - 173
Target Start/End: Original strand, 54966977 - 54967076
Alignment:
Q  73 aggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaag 172  Q
    ||||| ||| |||||||||| ||||||||||||||||||||| || || |||||  ||||||||| ||||||||||||||| ||||||||| ||||||||    
T  54966977 agggggaaccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcacatgttcaagttctggaaagaacctcttgtgtaaaaaacagggtaag 54967075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 75 - 173
Target Start/End: Original strand, 14983791 - 14983889
Alignment:
Q  75 gggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaagg 173  Q
    ||||||| |||||  ||| ||||||||||||||||| ||||||||| ||||||| ||||||| || |||| | |||||| |||||||||||||||||||    
T  14983791 gggtaaccttggcagaactggtaaagttgttgtcatatgattggaaggtcacggattcaagtctttgaaacagcctcttgtgtaaaaaatagggtaagg 14983889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 71 - 161
Target Start/End: Complemental strand, 48599005 - 48598915
Alignment:
Q  71 tgaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaa 161  Q
    ||||||||||| |||||||||| ||||||||||||||||||||| || || |||||||||||||||  |||||| | |||||| |||||||    
T  48599005 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa 48598915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 72 - 136
Target Start/End: Complemental strand, 11054327 - 11054263
Alignment:
Q  72 gaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagt 136  Q
    ||||||||||||||||||||| ||||||||||||||||||||| || || |||||||||||||||    
T  11054327 gaggggtaactttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagt 11054263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 75 - 162
Target Start/End: Complemental strand, 17315476 - 17315389
Alignment:
Q  75 gggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaa 162  Q
    ||||||| |||||||||||||||||||||||||||||||| || || ||||||||||||| |  | |||| |||||||| ||||||||    
T  17315476 gggtaaccttggcgcaaccggtaaagttgttgtcatgtgactgaaaggtcacgggttcaattcctcgaaacaacctcttgtgtaaaaa 17315389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 71 - 161
Target Start/End: Complemental strand, 5306845 - 5306755
Alignment:
Q  71 tgaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaa 161  Q
    ||||||||||| |||||||||| |||||||||| |||||||||| || || |||||||||||||||  |||||| | |||||| |||||||    
T  5306845 tgaggggtaaccttggcgcaactggtaaagttgatgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa 5306755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 72 - 173
Target Start/End: Original strand, 37494805 - 37494906
Alignment:
Q  72 gaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaa 171  Q
    |||||||||| |||| ||||| ||||||||||||| |||| || || || ||||| |||||||||  |||||| |||||||| ||||||||| |||||||    
T  37494805 gaggggtaaccttggtgcaactggtaaagttgttgccatgcgactgaaaggtcacaggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaa 37494904  T
Q  172 gg 173  Q
    ||    
T  37494905 gg 37494906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 72 - 144
Target Start/End: Complemental strand, 55830902 - 55830829
Alignment:
Q  72 gaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgg-gttcaagttttggaaa 144  Q
    |||||||||| ||| |||||| |||||||||||||||||||||| |||| ||||||| ||||||||||||||||    
T  55830902 gaggggtaaccttgacgcaactggtaaagttgttgtcatgtgatcggaaggtcacggagttcaagttttggaaa 55830829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 72 - 136
Target Start/End: Original strand, 23501747 - 23501811
Alignment:
Q  72 gaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagt 136  Q
    |||||||||| |||||||||| ||||||||||||||||||||| || || |||||||||||||||    
T  23501747 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagt 23501811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 83 - 175
Target Start/End: Complemental strand, 42164317 - 42164227
Alignment:
Q  83 ttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaaggct 175  Q
    |||||||||| |||||| |||||||||||||| || || ||||||||||||||| ||||||| |||||||| ||| ||||| |||||||||||    
T  42164317 ttggcgcaac-ggtaaaattgttgtcatgtgactgaaaggtcacgggttcaagtcttggaaacaacctcttgtgt-aaaaacagggtaaggct 42164227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 69 - 175
Target Start/End: Original strand, 54730200 - 54730307
Alignment:
Q  69 tttgaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgt-aaaaaatagg 167  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||||    || |||||||||||||||  | |||| | |||||| ||| ||||||||||    
T  54730200 tttgatgggtaactttggcgcaatcggtaaagttgttgtcatgtgaccaaaaggtcacgggttcaagtcctagaaacagcctcttgtgtaaaaaaatagg 54730299  T
Q  168 gtaaggct 175  Q
     |||||||    
T  54730300 ataaggct 54730307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 93 - 163
Target Start/End: Complemental strand, 487295 - 487225
Alignment:
Q  93 cggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaa 163  Q
    |||||||||||||||||||||| || || ||||||||||||||| ||||||| |||||||| |||| ||||    
T  487295 cggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcttggaaacaacctcttgtgtataaaa 487225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 72 - 161
Target Start/End: Complemental strand, 47528709 - 47528620
Alignment:
Q  72 gaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaa 161  Q
    |||||||||| |||| ||||| ||||||||||||||||||||| || || ||||| |||||||||  |||||| | |||||| |||||||    
T  47528709 gaggggtaaccttggtgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaa 47528620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 72 - 144
Target Start/End: Complemental strand, 55766647 - 55766574
Alignment:
Q  72 gaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcac-gggttcaagttttggaaa 144  Q
    |||||||||| ||| |||||| |||||||||||||||||||||  |||| ||||| ||||||||||||||||||    
T  55766647 gaggggtaaccttgacgcaactggtaaagttgttgtcatgtgaccggaaggtcacggggttcaagttttggaaa 55766574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 75 - 175
Target Start/End: Original strand, 16911519 - 16911619
Alignment:
Q  75 gggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaaggc 174  Q
    ||||||| |||||||||| ||||||||||||||||||||| |  || |||||||||||||||  | |||| | |||||| |||| |||  ||||||||||    
T  16911519 gggtaaccttggcgcaactggtaaagttgttgtcatgtgacttaaaggtcacgggttcaagtcctagaaacagcctcttgtgtacaaatcagggtaaggc 16911618  T
Q  175 t 175  Q
    |    
T  16911619 t 16911619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 71 - 175
Target Start/End: Original strand, 30639333 - 30639436
Alignment:
Q  71 tgaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggta 170  Q
    ||||||||||| |||||||||| ||||||||||||||| ||||| || || ||||| |||||||||  |||||| |  ||||| ||| ||||| ||||||    
T  30639333 tgaggggtaaccttggcgcaactggtaaagttgttgtcttgtgactgaaaggtcactggttcaagtcctggaaacagactcttgtgt-aaaaacagggta 30639431  T
Q  171 aggct 175  Q
    |||||    
T  30639432 aggct 30639436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 75 - 134
Target Start/End: Complemental strand, 5313172 - 5313113
Alignment:
Q  75 gggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaa 134  Q
    ||||||| |||||| ||| |||||||||||||||||||||||| || |||||||||||||    
T  5313172 gggtaaccttggcgtaactggtaaagttgttgtcatgtgattgaaaggtcacgggttcaa 5313113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 72 - 175
Target Start/End: Complemental strand, 13256578 - 13256479
Alignment:
Q  72 gaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaa 171  Q
    |||||||||| |||| ||||| ||||||||||||||||||||| ||||| ||||  |||||||||  ||    || |||||| ||||||||| |||||||    
T  13256578 gaggggtaaccttggtgcaactggtaaagttgttgtcatgtgactggaaggtcataggttcaagtcctg----gagcctcttgtgtaaaaaacagggtaa 13256483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 93 - 175
Target Start/End: Original strand, 35567145 - 35567227
Alignment:
Q  93 cggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaaggct 175  Q
    |||||||||||||||||||| | || || |||| |||||||||| ||||||| | || ||| ||||||||| |||||||||||    
T  35567145 cggtaaagttgttgtcatgtaactgaaaggtcatgggttcaagtcttggaaacagccacttgtgtaaaaaacagggtaaggct 35567227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 71 - 136
Target Start/End: Original strand, 14590790 - 14590855
Alignment:
Q  71 tgaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagt 136  Q
    |||| |||||| |||||||||| ||||||||||||||||||||| || || ||||||| |||||||    
T  14590790 tgagtggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagt 14590855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 94 - 175
Target Start/End: Original strand, 19027824 - 19027905
Alignment:
Q  94 ggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaaggct 175  Q
    |||| ||||||||||| |||| || || |||||||||||||||  |||||| ||| |||| ||||||||| |||||||||||    
T  19027824 ggtagagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacaacatcttgtgtaaaaaacagggtaaggct 19027905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 72 - 129
Target Start/End: Original strand, 20405047 - 20405104
Alignment:
Q  72 gaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacggg 129  Q
    |||||||||| ||| |||||| ||||||||||||||||||||| ||||| ||||||||    
T  20405047 gaggggtaaccttgacgcaactggtaaagttgttgtcatgtgactggaaggtcacggg 20405104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 96 - 168
Target Start/End: Complemental strand, 23580365 - 23580293
Alignment:
Q  96 taaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaataggg 168  Q
    |||||||||||||| |||| || || |||||||||||||||| | |||||| |||||| ||||||||| ||||    
T  23580365 taaagttgttgtcacgtgactgaaaggtcacgggttcaagttctagaaagagcctcttgtgtaaaaaacaggg 23580293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 94 - 161
Target Start/End: Original strand, 41549358 - 41549425
Alignment:
Q  94 ggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaa 161  Q
    ||||||||||||| ||  |||||| || |||||||||||||||| |||||| |||||||| |||||||    
T  41549358 ggtaaagttgttgacacatgattgaaatgtcacgggttcaagttctggaaacaacctcttgtgtaaaa 41549425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 281 - 429
Target Start/End: Complemental strand, 30828434 - 30828284
Alignment:
Q  281 gtgtcgaaccagcaacatttagcatgttataacaccccctttccact-caacagctacaatttaattgataatatacatataatatggtatat-taggaa 378  Q
    ||||| |||||||||||||||||| | |||  |||||| |||||||| || |||| ||||| | ||||| || |||||  |||||||||||||  |  ||    
T  30828434 gtgtcaaaccagcaacatttagcacgctatggcaccccttttccactgcagcagccacaatcttattgacaaaatacaactaatatggtatataaaaaaa 30828335  T
Q  379 atttgggggatgatgtggtccccacggatctctgaagagatccgccgctgc 429  Q
    ||||||||||||| ||||  ||| ||| ||| |||||||||| ||| ||||    
T  30828334 atttgggggatgaagtggctcccgcgggtctttgaagagatctgccactgc 30828284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 99 - 161
Target Start/End: Complemental strand, 39077948 - 39077886
Alignment:
Q  99 agttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaa 161  Q
    ||||||||||||||||||| || |||||||||||||||  |||||| | |||||| |||||||    
T  39077948 agttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa 39077886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 94 - 175
Target Start/End: Original strand, 25343163 - 25343244
Alignment:
Q  94 ggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaaggct 175  Q
    |||||||||||||||| |||| ||  | ||||| |||||||||| |||||| |  ||||| ||||||||| |||||||||||    
T  25343163 ggtaaagttgttgtcacgtgactgataggtcacaggttcaagttctggaaatagtctcttgtgtaaaaaacagggtaaggct 25343244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 94 - 175
Target Start/End: Original strand, 43035224 - 43035305
Alignment:
Q  94 ggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaaggct 175  Q
    |||||||||||||||| |||| || || |||||||||||||||   ||||| |||||||| ||||| ||| | |||||||||    
T  43035224 ggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtccaggaaacaacctcttgtgtaagaaacacggtaaggct 43035305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 101 - 173
Target Start/End: Complemental strand, 7385628 - 7385556
Alignment:
Q  101 ttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaagg 173  Q
    |||||||||||||| || || ||||||||||||||   |||||| | |||| | |||||||||||||||||||    
T  7385628 ttgttgtcatgtgactgaaaggtcacgggttcaagccctggaaacagcctcatgtgtaaaaaatagggtaagg 7385556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 94 - 162
Target Start/End: Original strand, 40915805 - 40915873
Alignment:
Q  94 ggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaa 162  Q
    ||||||||||||||||||||| |  || |||||||||||||||  |||||| | |||||| ||||||||    
T  40915805 ggtaaagttgttgtcatgtgactataaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaa 40915873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 83 - 163
Target Start/End: Complemental strand, 54640508 - 54640429
Alignment:
Q  83 ttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaa 163  Q
    |||||||||| |||||| ||||||||| |||  || || ||||||||||||||| ||||||| | |||||| |||||||||    
T  54640508 ttggcgcaac-ggtaaaattgttgtcacgtggctgaaaggtcacgggttcaagtcttggaaacagcctcttgtgtaaaaaa 54640429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 96 - 171
Target Start/End: Original strand, 7227710 - 7227785
Alignment:
Q  96 taaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaa 171  Q
    ||||||||||||||||||| || ||||||| | |||||| ||  ||||| |||| ||| ||| |||||||||||||    
T  7227710 taaagttgttgtcatgtgactgaaaagtcatgagttcaaattcaggaaacaaccgcttgtgttaaaaatagggtaa 7227785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 75 - 114
Target Start/End: Original strand, 18969698 - 18969737
Alignment:
Q  75 gggtaactttggcgcaaccggtaaagttgttgtcatgtga 114  Q
    ||||||| |||||||||| |||||||||||||||||||||    
T  18969698 gggtaaccttggcgcaactggtaaagttgttgtcatgtga 18969737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 163
Target Start/End: Original strand, 25463108 - 25463167
Alignment:
Q  104 ttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaa 163  Q
    ||||||||||| || || |||||||||||||||  |||||| |||||||| |||||||||    
T  25463108 ttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaaa 25463167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 77 - 163
Target Start/End: Complemental strand, 30352767 - 30352681
Alignment:
Q  77 gtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaa 163  Q
    ||||| |||||||||| |||||||||||||||| ||||  | || ||||||||||  |||  |||||| | |||||| |||||||||    
T  30352767 gtaaccttggcgcaactggtaaagttgttgtcaagtgaccgaaaggtcacgggttagagtcctggaaacagcctcttgtgtaaaaaa 30352681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 93 - 175
Target Start/End: Complemental strand, 39029221 - 39029139
Alignment:
Q  93 cggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaaggct 175  Q
    |||||||||||||||| ||||| |  || ||||  ||||||||  ||||||| | |||||| ||||||||| |||||||||||    
T  39029221 cggtaaagttgttgtcgtgtgactaaaaggtcataggttcaagccttggaaacagcctcttgtgtaaaaaacagggtaaggct 39029139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 101 - 175
Target Start/End: Complemental strand, 41018945 - 41018872
Alignment:
Q  101 ttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaaggct 175  Q
    ||||||||| |||| || || |||||||||||||||  |||||| |||||||| ||| |||| ||||||||||||    
T  41018945 ttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgt-aaaattagggtaaggct 41018872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 136
Target Start/End: Complemental strand, 3580994 - 3580953
Alignment:
Q  95 gtaaagttgttgtcatgtgattggaaagtcacgggttcaagt 136  Q
    |||||||||||||||||||| || ||||||||| ||||||||    
T  3580994 gtaaagttgttgtcatgtgactgaaaagtcacgagttcaagt 3580953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 93 - 134
Target Start/End: Complemental strand, 12257753 - 12257712
Alignment:
Q  93 cggtaaagttgttgtcatgtgattggaaagtcacgggttcaa 134  Q
    ||||||||||||||||| ||||||| || |||||||||||||    
T  12257753 cggtaaagttgttgtcacgtgattgaaaggtcacgggttcaa 12257712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 17043549 - 17043472
Alignment:
Q  98 aagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaaggct 175  Q
    |||||||||||| |||| || || ||||| |||||||||  |||||| | |||||| ||||||| | |||||||||||    
T  17043549 aagttgttgtcaagtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaatacagggtaaggct 17043472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 165
Target Start/End: Complemental strand, 30690340 - 30690271
Alignment:
Q  96 taaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaata 165  Q
    |||||| ||||||| |||| || || |||||||||||||||  |||||| | |||||| |||||||||||    
T  30690340 taaagtggttgtcaagtgactgaaaggtcacgggttcaagtcctggaaaaagcctcttgtgtaaaaaata 30690271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 175
Target Start/End: Complemental strand, 44363291 - 44363210
Alignment:
Q  94 ggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaaggct 175  Q
    ||||||||||||||||||||| || || |||||| ||||||||  || ||| | |||| | ||||||||| |||||| ||||    
T  44363291 ggtaaagttgttgtcatgtgactgaaaggtcacgagttcaagtcctgaaaacagcctcgtgtgtaaaaaacagggtagggct 44363210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 50856405 - 50856353
Alignment:
Q  83 ttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagt 136  Q
    |||||||||| ||||||||||||||||  |||||| || |||||||||||||||    
T  50856405 ttggcgcaac-ggtaaagttgttgtcacatgattgaaaggtcacgggttcaagt 50856353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 57; Significance: 1e-23; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 83 - 175
Target Start/End: Complemental strand, 12222087 - 12221995
Alignment:
Q  83 ttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaaggct 175  Q
    |||||||||| ||||||||||||||||||||| || || ||||||||||||||| ||||||| | |||||| ||||||||| |||||||||||    
T  12222087 ttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcttggaaacagcctcttgtgtaaaaaacagggtaaggct 12221995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 71 - 163
Target Start/End: Complemental strand, 14975262 - 14975170
Alignment:
Q  71 tgaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaa 163  Q
    |||||| |||| |||||||||||||||||||||||||||||||| ||||| ||||||| |||||||  |||||| | |||||| |||||||||    
T  14975262 tgagggataaccttggcgcaaccggtaaagttgttgtcatgtgactggaaggtcacggattcaagtcctggaaacagcctcttgtgtaaaaaa 14975170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 95 - 172
Target Start/End: Complemental strand, 32728314 - 32728237
Alignment:
Q  95 gtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaag 172  Q
    |||||||||||||||||||| || || ||||| | ||||||||||||||| |||||||||||||||||| ||||||||    
T  32728314 gtaaagttgttgtcatgtgactgaaaggtcacagattcaagttttggaaacaacctcttatgtaaaaaacagggtaag 32728237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 71 - 175
Target Start/End: Original strand, 8409196 - 8409300
Alignment:
Q  71 tgaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggta 170  Q
    ||||||||||| |||||||||| |||||||||||||| |||||| || || ||||||| |||||||  ||||||   |||||| ||||||||| ||||||    
T  8409196 tgaggggtaaccttggcgcaactggtaaagttgttgtaatgtgactgaaaggtcacggattcaagtcctggaaactgcctcttgtgtaaaaaacagggta 8409295  T
Q  171 aggct 175  Q
    |||||    
T  8409296 aggct 8409300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 72 - 161
Target Start/End: Original strand, 1346918 - 1347007
Alignment:
Q  72 gaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaa 161  Q
    |||||||||| |||||||||| ||||||||||||||||||||| || || |||||||||||||||  |||||| | || ||| |||||||    
T  1346918 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagccacttgtgtaaaa 1347007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 72 - 161
Target Start/End: Complemental strand, 1354936 - 1354847
Alignment:
Q  72 gaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaa 161  Q
    |||||||||| |||||||||| ||||||||||||||||||||| || || ||||| |||||||||  |||||| | |||||| |||||||    
T  1354936 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcactggttcaagtcctggaaacagcctcttgtgtaaaa 1354847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 74 - 170
Target Start/End: Complemental strand, 3815256 - 3815160
Alignment:
Q  74 ggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggta 170  Q
    |||||||| |||||||||| ||||||||||||||||||||| || || |||||||||||||||  |||||| |  || || ||||||||||| ||||    
T  3815256 ggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaatgtcacgggttcaagtcctggaaacagactattgtgtaaaaaatatggta 3815160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 72 - 172
Target Start/End: Original strand, 6024187 - 6024287
Alignment:
Q  72 gaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaa 171  Q
    ||||||||| |||| |||||| ||||||||||||||||||||||||||| ||||||| ||||| |  | |||| | |||||| ||||||||| | |||||    
T  6024187 gaggggtaattttgacgcaactggtaaagttgttgtcatgtgattggaaggtcacggtttcaaatcctagaaacagcctcttgtgtaaaaaacatggtaa 6024286  T
Q  172 g 172  Q
    |    
T  6024287 g 6024287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 76 - 172
Target Start/End: Original strand, 20400625 - 20400721
Alignment:
Q  76 ggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaag 172  Q
    |||||| |||||||||  |||| |||||||||||||||| || || ||||| |||||||||| |||||| || ||||| ||||||||| ||||||||    
T  20400625 ggtaaccttggcgcaattggtatagttgttgtcatgtgactgaaaggtcacaggttcaagttatggaaacaatctcttgtgtaaaaaacagggtaag 20400721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 72 - 136
Target Start/End: Complemental strand, 33923009 - 33922945
Alignment:
Q  72 gaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagt 136  Q
    |||||||||| |||||||||||||||||||||||||||| ||| || |||||||| |||||||||    
T  33923009 gaggggtaaccttggcgcaaccggtaaagttgttgtcatttgactgaaaagtcacaggttcaagt 33922945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 72 - 175
Target Start/End: Original strand, 1941809 - 1941912
Alignment:
Q  72 gaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaa 171  Q
    |||||||||| |||| ||||| ||||||||||||||||| ||| ||||| ||| ||| || ||||  || ||| |||||||| ||||||||| |||||||    
T  1941809 gaggggtaaccttggtgcaactggtaaagttgttgtcatctgactggaaggtcgcggattgaagtcatgtaaacaacctcttgtgtaaaaaacagggtaa 1941908  T
Q  172 ggct 175  Q
    ||||    
T  1941909 ggct 1941912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 71 - 162
Target Start/End: Original strand, 9161076 - 9161167
Alignment:
Q  71 tgaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaa 162  Q
    ||||||||||| ||| ||||| |||||||||||||||||||||| || || ||||| |||||||||  |||||| | |||||| ||||||||    
T  9161076 tgaggggtaaccttgacgcaatcggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaaa 9161167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 72 - 171
Target Start/End: Complemental strand, 15866218 - 15866119
Alignment:
Q  72 gaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaa 171  Q
    |||||||||| ||||| |||| ||||||||||||| |||||||||| || |||| |||||||| |  |||||| | ||||||| |||||||| |||||||    
T  15866218 gaggggtaaccttggcccaactggtaaagttgttggcatgtgattgaaaggtcatgggttcaattcctggaaacagcctcttaagtaaaaaacagggtaa 15866119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 73 - 175
Target Start/End: Complemental strand, 13905158 - 13905057
Alignment:
Q  73 aggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaag 172  Q
    ||||| ||| |||||||||| ||||||||||||||||||||| || || |||||||| ||||||  || |||  ||||||| ||||||||| ||||||||    
T  13905158 agggggaaccttggcgcaac-ggtaaagttgttgtcatgtgactgaaaggtcacgggctcaagtcctgaaaacgacctcttgtgtaaaaaacagggtaag 13905060  T
Q  173 gct 175  Q
    |||    
T  13905059 gct 13905057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 71 - 175
Target Start/End: Complemental strand, 29356040 - 29355935
Alignment:
Q  71 tgaggggtaactttggcgcaaccggtaaag-ttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggt 169  Q
    ||||||||||| ||||| |||| ||||||  |||||||||||||| || || |||||||||||||||  |||||| | |||||| ||||| ||| |||||    
T  29356040 tgaggggtaaccttggcacaactggtaaaaattgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaagaaacagggt 29355941  T
Q  170 aaggct 175  Q
    ||||||    
T  29355940 aaggct 29355935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 83 - 175
Target Start/End: Original strand, 14553477 - 14553568
Alignment:
Q  83 ttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaaggct 175  Q
    |||| ||||| ||||||||||||||||||||| |  || ||||| |||||||||  |||||| | | |||| |||||||||||||||||||||    
T  14553477 ttggtgcaactggtaaagttgttgtcatgtgacta-aaggtcacaggttcaagtcctggaaatagcttcttgtgtaaaaaatagggtaaggct 14553568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 86 - 161
Target Start/End: Complemental strand, 2166579 - 2166504
Alignment:
Q  86 gcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaa 161  Q
    |||||||  ||||||||||||| |||||| || || |||||||||||||||  |||||| |||||||| |||||||    
T  2166579 gcgcaactagtaaagttgttgttatgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaa 2166504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 86 - 161
Target Start/End: Complemental strand, 2178212 - 2178137
Alignment:
Q  86 gcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaa 161  Q
    |||||||  ||||||||||||| |||||| || || |||||||||||||||  |||||| |||||||| |||||||    
T  2178212 gcgcaactagtaaagttgttgttatgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaa 2178137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 110 - 175
Target Start/End: Original strand, 17448316 - 17448381
Alignment:
Q  110 tgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaaggct 175  Q
    |||||||| || ||||||||||||||||||| ||| ||| | || ||||||||| |||||||||||    
T  17448316 tgtgattgaaaggtcacgggttcaagttttgaaaacaacattttgtgtaaaaaacagggtaaggct 17448381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 67 - 175
Target Start/End: Original strand, 22967120 - 22967227
Alignment:
Q  67 aatttgaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatag 166  Q
    ||||||||||||||| || ||||| | | ||||||| ||||||||||| || || |||||  ||||||||  |||||| ||| |||| ||| ||||||||    
T  22967120 aatttgaggggtaaccttcgcgcatctgataaagttattgtcatgtgactgtaaggtcactagttcaagtcatggaaacaacttcttgtgt-aaaaatag 22967218  T
Q  167 ggtaaggct 175  Q
    | |||||||    
T  22967219 gataaggct 22967227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 67 - 175
Target Start/End: Complemental strand, 23821273 - 23821166
Alignment:
Q  67 aatttgaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatag 166  Q
    ||||||||||||||| || ||||| | | ||||||| ||||||||||| || || |||||  ||||||||  |||||| ||| |||| ||| ||||||||    
T  23821273 aatttgaggggtaaccttcgcgcatctgataaagttattgtcatgtgactgtaaggtcactagttcaagtcatggaaacaacttcttgtgt-aaaaatag 23821175  T
Q  167 ggtaaggct 175  Q
    | |||||||    
T  23821174 gataaggct 23821166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 76 - 163
Target Start/End: Original strand, 24734591 - 24734678
Alignment:
Q  76 ggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaa 163  Q
    |||||| |||||||||| ||||||||||||||||||||| || || ||||   |||||| |  | |||| |||||||| |||||||||    
T  24734591 ggtaacattggcgcaactggtaaagttgttgtcatgtgactgaaaggtcaaaagttcaaatccttgaaacaacctcttgtgtaaaaaa 24734678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 84 - 114
Target Start/End: Complemental strand, 3116299 - 3116269
Alignment:
Q  84 tggcgcaaccggtaaagttgttgtcatgtga 114  Q
    |||||||||||||||||||||||||||||||    
T  3116299 tggcgcaaccggtaaagttgttgtcatgtga 3116269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 93 - 175
Target Start/End: Original strand, 12889401 - 12889483
Alignment:
Q  93 cggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaaggct 175  Q
    ||||||||||||||||| |||| || || ||||| ||||||||| ||| ||| | |||||| ||| ||||| |||| ||||||    
T  12889401 cggtaaagttgttgtcacgtgagtgaaaggtcacaggttcaagtcttgaaaacagcctcttgtgttaaaaacagggcaaggct 12889483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 96 - 161
Target Start/End: Original strand, 28007604 - 28007671
Alignment:
Q  96 taaagttgttgtcatgtgattggaaa--gtcacgggttcaagttttggaaagaacctcttatgtaaaa 161  Q
    |||||||||||||||||||   ||||  |||||||||||||||  |||||||| |||||| |||||||    
T  28007604 taaagttgttgtcatgtgacatgaaaaggtcacgggttcaagtcctggaaagagcctcttgtgtaaaa 28007671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 83 - 173
Target Start/End: Original strand, 46796 - 46886
Alignment:
Q  83 ttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaagg 173  Q
    |||||||||  ||||||||||||||||||||| | ||| |||||||||||||||  |||||| |||||||| |||||||||||||||||||    
T  46796 ttggcgcaattggtaaagttgttgtcatgtgactagaaggtcacgggttcaagtgctggaaacaacctcttgtgtaaaaaatagggtaagg 46886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 71 - 136
Target Start/End: Complemental strand, 24949 - 24884
Alignment:
Q  71 tgaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagt 136  Q
    ||||||||||| |||||||||| ||||||||||||||||||||| || || |||| ||||||||||    
T  24949 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagt 24884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 49; Significance: 9e-19; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 83 - 175
Target Start/End: Original strand, 10775 - 10867
Alignment:
Q  83 ttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaaggct 175  Q
    |||| ||||| ||||||||||||||||||||| ||||| |||||||||||||| | || ||| |||||||| ||||||||| |||||| ||||    
T  10775 ttggtgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaaggtctgaaaacaacctcttgtgtaaaaaacagggtagggct 10867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 72 - 161
Target Start/End: Original strand, 30533 - 30622
Alignment:
Q  72 gaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaa 161  Q
    |||||||||| |||||||||| ||||||||||||||||||||| || || ||||| |||||||||  |||||| | |||||| |||||||    
T  30533 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcaccggttcaagtcctggaaacagcctcttgtgtaaaa 30622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 71 - 144
Target Start/End: Original strand, 83828 - 83901
Alignment:
Q  71 tgaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaa 144  Q
    ||||||||||| ||||||||||  |||||||||||||||||||| || || ||||||||||||||| |||||||    
T  83828 tgaggggtaaccttggcgcaactagtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcttggaaa 83901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 74 - 162
Target Start/End: Complemental strand, 13202 - 13114
Alignment:
Q  74 ggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaa 162  Q
    |||||||| |||||||||||||||||||||||||||||||| || || ||||| |||||||||  |||||| | ||||||  |||||||    
T  13202 ggggtaaccttggcgcaaccggtaaagttgttgtcatgtgactgaaaggtcaccggttcaagtcctggaaacagcctcttgcgtaaaaa 13114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 44; Significance: 8e-16; HSPs: 4)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 69 - 136
Target Start/End: Original strand, 8896 - 8963
Alignment:
Q  69 tttgaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagt 136  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||| || || ||||| |||||||||    
T  8896 tttgaggggtaaccttggcgcaaccggtgaagttgttgtcatgtgactgaaatgtcacaggttcaagt 8963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 69 - 136
Target Start/End: Original strand, 19224 - 19291
Alignment:
Q  69 tttgaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagt 136  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||| || || ||||| |||||||||    
T  19224 tttgaggggtaaccttggcgcaaccggtgaagttgttgtcatgtgactgaaatgtcacaggttcaagt 19291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 75 - 161
Target Start/End: Complemental strand, 10226 - 10140
Alignment:
Q  75 gggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaa 161  Q
    ||||||| ||| |||||| ||||||||||||||||||||| || || |||||||||||||||  |||||| | |||||| |||||||    
T  10226 gggtaaccttgacgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa 10140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 75 - 161
Target Start/End: Complemental strand, 20554 - 20468
Alignment:
Q  75 gggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaa 161  Q
    ||||||| ||| |||||| ||||||||||||||||||||| || || |||||||||||||||  |||||| | |||||| |||||||    
T  20554 gggtaaccttgacgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa 20468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 71 - 136
Target Start/End: Complemental strand, 226588 - 226523
Alignment:
Q  71 tgaggggtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagt 136  Q
    |||| |||||| |||||||||| ||||||||||||||||||||| || || ||||||| |||||||    
T  226588 tgagtggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagt 226523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 86 - 161
Target Start/End: Original strand, 4125 - 4200
Alignment:
Q  86 gcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaa 161  Q
    |||||||  ||||||||||||| |||||| || || |||||||||||||||  |||||| |||||||| |||||||    
T  4125 gcgcaactagtaaagttgttgttatgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaa 4200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 77 - 172
Target Start/End: Original strand, 58936 - 59031
Alignment:
Q  77 gtaactttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaag 172  Q
    ||||| |||| ||||| |||||| || ||||||||||| || || |||||||||||||||  |||||| | |||||| | ||||||| ||||||||    
T  58936 gtaaccttggagcaactggtaaacttattgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaacagggtaag 59031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1176 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 161
Target Start/End: Complemental strand, 1744 - 1677
Alignment:
Q  94 ggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaa 161  Q
    ||||||||||||||||||||| || || |||| ||||||||||  || ||| |||||||| |||||||    
T  1744 ggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctgaaaacaacctcttgtgtaaaa 1677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 83 - 161
Target Start/End: Original strand, 11097 - 11174
Alignment:
Q  83 ttggcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaa 161  Q
    |||||||||| |||||||||||| | |||||| || || |||||||||||||||  |||||| | |||||| |||||||    
T  11097 ttggcgcaactggtaaagttgttct-atgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa 11174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 72 - 136
Target Start/End: Complemental strand, 35200 - 35135
Alignment:
Q  72 gaggggtaactttggcgcaaccggtaaagttg-ttgtcatgtgattggaaagtcacgggttcaagt 136  Q
    ||||| ||||||||| ||||| |||||||||  ||||||||||| || || |||||||||||||||    
T  35200 gagggataactttggtgcaactggtaaagtttattgtcatgtgactgtaaggtcacgggttcaagt 35135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 94 - 162
Target Start/End: Original strand, 8867 - 8935
Alignment:
Q  94 ggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaa 162  Q
    ||||||||||||||||||||| || || ||||| ||||||| |  |||||| ||| |||| ||||||||    
T  8867 ggtaaagttgttgtcatgtgactgtaaggtcacaggttcaattcctggaaacaacttcttgtgtaaaaa 8935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 86 - 162
Target Start/End: Original strand, 43097 - 43173
Alignment:
Q  86 gcgcaaccggtaaagttgttgtcatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaa 162  Q
    ||||||| ||||||||| |||||||||||||| || |||||| ||||| ||  | |||| | |||||| ||||||||    
T  43097 gcgcaactggtaaagttattgtcatgtgattgaaaggtcacgagttcaggtcctagaaacagcctcttgtgtaaaaa 43173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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