View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14904_high_26 (Length: 201)
Name: NF14904_high_26
Description: NF14904
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14904_high_26 |
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Alignment Details
Target: chr6 (Bit Score: 69; Significance: 4e-31; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 111 - 183
Target Start/End: Complemental strand, 8206549 - 8206477
Alignment:
| Q |
111 |
ctcataagcacatcaccaagtctttaaaaatggaaaattgtttagccaccggatattttaacaggctaacaaa |
183 |
Q |
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| T |
8206549 |
ctcataagcacatcatcaagtctttaaaaatggaaaattgtttagccaccggatattttaacaggctaacaaa |
8206477 |
T |
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Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 59
Target Start/End: Complemental strand, 8206646 - 8206601
Alignment:
| Q |
14 |
cagagacccaatttagaatgaacctttgttcaacgcacaccaagtc |
59 |
Q |
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|||| ||||||||||||||||| ||||||||||||||||||||||| |
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| T |
8206646 |
cagaaacccaatttagaatgaatctttgttcaacgcacaccaagtc |
8206601 |
T |
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