View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14904_low_14 (Length: 376)

Name: NF14904_low_14
Description: NF14904
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14904_low_14
NF14904_low_14
[»] chr4 (17 HSPs)
chr4 (127-355)||(44494681-44494913)
chr4 (1-126)||(31910554-31910678)
chr4 (1-92)||(32449351-32449441)
chr4 (7-92)||(31911398-31911482)
chr4 (7-92)||(32450148-32450232)
chr4 (1-74)||(17978314-17978388)
chr4 (10-67)||(34372212-34372269)
chr4 (11-74)||(22061381-22061444)
chr4 (1-74)||(37142635-37142709)
chr4 (11-68)||(32893662-32893719)
chr4 (11-127)||(31634102-31634218)
chr4 (32-74)||(23424522-23424564)
chr4 (11-73)||(33409371-33409433)
chr4 (1-74)||(20351235-20351308)
chr4 (12-126)||(47377533-47377646)
chr4 (11-68)||(49346164-49346221)
chr4 (10-74)||(39429276-39429340)
[»] chr7 (9 HSPs)
chr7 (1-126)||(29006347-29006472)
chr7 (1-126)||(29007121-29007247)
chr7 (11-126)||(29314581-29314696)
chr7 (11-126)||(41224776-41224891)
chr7 (1-74)||(34368138-34368212)
chr7 (29-127)||(44896045-44896143)
chr7 (1-67)||(30916420-30916486)
chr7 (13-92)||(23632957-23633034)
chr7 (59-92)||(25137907-25137940)
[»] chr8 (10 HSPs)
chr8 (11-126)||(41092172-41092287)
chr8 (29-126)||(35759190-35759287)
chr8 (29-92)||(41348178-41348241)
chr8 (4-64)||(8181462-8181522)
chr8 (32-74)||(42346060-42346102)
chr8 (11-68)||(5873222-5873279)
chr8 (59-92)||(30846478-30846511)
chr8 (32-92)||(7054124-7054183)
chr8 (34-74)||(7054774-7054814)
chr8 (10-74)||(42345445-42345509)
[»] chr3 (6 HSPs)
chr3 (15-92)||(32321349-32321425)
chr3 (1-88)||(20313354-20313441)
chr3 (32-74)||(43768714-43768756)
chr3 (1-67)||(44406255-44406321)
chr3 (32-92)||(45298314-45298372)
chr3 (1-66)||(47480566-47480631)
[»] chr2 (8 HSPs)
chr2 (11-126)||(16426553-16426668)
chr2 (1-74)||(2992053-2992127)
chr2 (11-68)||(17946899-17946956)
chr2 (32-74)||(20991974-20992016)
chr2 (59-92)||(6609584-6609617)
chr2 (55-92)||(6610021-6610058)
chr2 (55-92)||(15562018-15562055)
chr2 (59-92)||(16903431-16903464)
[»] chr1 (8 HSPs)
chr1 (1-67)||(29334871-29334937)
chr1 (1-74)||(51609432-51609506)
chr1 (1-74)||(36385723-36385796)
chr1 (34-74)||(42383770-42383810)
chr1 (51-92)||(17151853-17151894)
chr1 (4-68)||(41134558-41134623)
chr1 (10-74)||(50427474-50427538)
chr1 (10-74)||(50428079-50428143)
[»] scaffold0155 (1 HSPs)
scaffold0155 (11-126)||(17339-17454)
[»] chr5 (7 HSPs)
chr5 (1-74)||(39950256-39950330)
chr5 (32-74)||(1969830-1969872)
chr5 (34-92)||(9923422-9923479)
chr5 (1-67)||(18153358-18153424)
chr5 (59-92)||(3596275-3596308)
chr5 (55-92)||(8320908-8320945)
chr5 (59-92)||(42655722-42655755)
[»] scaffold0129 (1 HSPs)
scaffold0129 (11-92)||(42520-42601)
[»] chr6 (2 HSPs)
chr6 (33-92)||(1034755-1034814)
chr6 (12-92)||(24126006-24126085)


Alignment Details
Target: chr4 (Bit Score: 194; Significance: 1e-105; HSPs: 17)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 127 - 355
Target Start/End: Original strand, 44494681 - 44494913
Alignment:
Q  127 ccttcaaatttcatcttaccatacctcttgacttgaaagcccataatataaaaaactagaaagaatgttgagctgacgcaccaactttatcaactaacaa 226  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44494681 ccttcaaatttcatcttaccatacctcttggcttgaaagcccataatataaaaaactagaaagaatgttgagctgacgcaccaactttatcaactaacaa 44494780  T
Q  227 gtaacaataaaagactaagtt-gagcagagatttggtggtacgaaccatagtagaaccttgg--tcacaccctatattggctaacacctgaataaaattt 323  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||| |||||||||    
T  44494781 gtaacaataaaagactaagttagagcagagatttggtcgtacgaaccatagtagaaccttggtctcacaccctatattggctaacacctgcataaaattt 44494880  T
Q  324 cactttcctataaaaaa-gataaatcttgacct 355  Q
    ||||||||||||||||| |||||||||||||||    
T  44494881 cactttcctataaaaaatgataaatcttgacct 44494913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 31910678 - 31910554
Alignment:
Q  1 agagaaagagaaaaaatatagtgtggatagaccatgataaaattggtactcctctttaatctaatggttaaaaactaatttttccatggtggnnnnnnnc 100  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| ||||||||||||||||| ||| |||||||||       |    
T  31910678 agagaaagagaaaaaatatagtgtg-atagaccatgataaaattgatactcctctttaatttaatggttaaaaactaactttcccatggtgggaaaaaac 31910580  T
Q  101 aagcctttcccaaattaaatggcacc 126  Q
    |||||||||| |||||||||| ||||    
T  31910579 aagcctttcctaaattaaatgacacc 31910554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 32449441 - 32449351
Alignment:
Q  1 agagaaagagaaaaaatatagtgtggatagaccatgataaaattggtactcctctttaatctaatggttaaaaactaatttttccatggtgg 92  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || ||||| | |||||||||||||||    
T  32449441 agagaaagagaaaaaatatagtgtggatagaccatgataaaattggtattcctctttaatctaattgtcaaaaaat-atttttccatggtgg 32449351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 7 - 92
Target Start/End: Original strand, 31911398 - 31911482
Alignment:
Q  7 agagaaaaaatatagtgtggatagaccatgataaaattggtactcctctttaatctaatggttaaaaactaatttttccatggtgg 92  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| ||||| ||||| | | |||||||||||||    
T  31911398 agagaaaaaatatagtgtggatagaccatgataaaatcggtactcctccttaatctgatggtcaaaaaat-acttttccatggtgg 31911482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 7 - 92
Target Start/End: Original strand, 32450148 - 32450232
Alignment:
Q  7 agagaaaaaatatagtgtggatagaccatgataaaattggtactcctctttaatctaatggttaaaaactaatttttccatggtgg 92  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| ||||| ||||| | | |||||||||||||    
T  32450148 agagaaaaaatatagtgtggatagaccatgataaaatcggtactcctccttaatctgatggtcaaaaaat-acttttccatggtgg 32450232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 17978388 - 17978314
Alignment:
Q  1 agagaaagagaaaaaa-tatagtgtggatagaccatgataaaattggtactcctctttaatctaatggttaaaaa 74  Q
    |||||||||||||||| ||| || | |||||||||||||||||||  ||| ||||||||||||||||| ||||||    
T  17978388 agagaaagagaaaaaaatattgtatagatagaccatgataaaattaatacacctctttaatctaatggctaaaaa 17978314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 67
Target Start/End: Original strand, 34372212 - 34372269
Alignment:
Q  10 gaaaaaatatagtgtggatagaccatgataaaattggtactcctctttaatctaatgg 67  Q
    ||||||||||||||| || || |||||||||||||  |||||||||||||||||||||    
T  34372212 gaaaaaatatagtgtagacagtccatgataaaattaatactcctctttaatctaatgg 34372269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 74
Target Start/End: Complemental strand, 22061444 - 22061381
Alignment:
Q  11 aaaaaatatagtgtggatagaccatgataaaattggtactcctctttaatctaatggttaaaaa 74  Q
    ||||||||| ||||| | || |||||||||||||  ||||||||||||||||||||||| ||||    
T  22061444 aaaaaatatggtgtgaacagtccatgataaaattcatactcctctttaatctaatggttgaaaa 22061381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 37142635 - 37142709
Alignment:
Q  1 agagaaagagaaaaaa-tatagtgtggatagaccatgataaaattggtactcctctttaatctaatggttaaaaa 74  Q
    |||||||||||||||| ||| || | |||||||||||||||||||   || ||||||||||||||||| ||||||    
T  37142635 agagaaagagaaaaaaatattgtatagatagaccatgataaaattaacacacctctttaatctaatggctaaaaa 37142709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 11 - 68
Target Start/End: Complemental strand, 32893719 - 32893662
Alignment:
Q  11 aaaaaatatagtgtggatagaccatgataaaattggtactcctctttaatctaatggt 68  Q
    ||||||| |||||||||||||||||||||||||  || ||||  ||||||||||||||    
T  32893719 aaaaaatgtagtgtggatagaccatgataaaatcagtgctccaatttaatctaatggt 32893662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 127
Target Start/End: Complemental strand, 31634218 - 31634102
Alignment:
Q  11 aaaaaatatagtgtggatagaccatgataaaattg-gtactcctctttaatctaatggttaaaaactaatttttccatggtggnnnnnnncaagcctttc 109  Q
    ||||||||  |||| || ||||||||||||||||| || | ||| ||||||| |||||||||||||||| ||| ||||||| |        |||||||||    
T  31634218 aaaaaatagcgtgttgaaagaccatgataaaattgtgttc-cctatttaatcaaatggttaaaaactaactttcccatggtagaaaaaaataagcctttc 31634120  T
Q  110 ccaaattaaatggcaccc 127  Q
     |||||||||||||||||    
T  31634119 gcaaattaaatggcaccc 31634102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 74
Target Start/End: Complemental strand, 23424564 - 23424522
Alignment:
Q  32 ccatgataaaattggtactcctctttaatctaatggttaaaaa 74  Q
    |||||||||||||  ||||||||||||||||||||||| ||||    
T  23424564 ccatgataaaattaatactcctctttaatctaatggttgaaaa 23424522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 73
Target Start/End: Original strand, 33409371 - 33409433
Alignment:
Q  11 aaaaaatatagtgtggatagaccatgataaaattggtactcctctttaatctaatggttaaaa 73  Q
    ||||||||||||||  |||||||||| ||||||   ||| ||||||||||||||||| |||||    
T  33409371 aaaaaatatagtgtacatagaccatgttaaaatctatacacctctttaatctaatggataaaa 33409433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 20351235 - 20351308
Alignment:
Q  1 agagaaagagaaaaaatatagtgtggatagaccatgataaaattggtactcctctttaatctaatggttaaaaa 74  Q
    ||||||||  ||||||||| |||| | ||| |||||||||||||  |||| |||||||||||||| ||| ||||    
T  20351235 agagaaaggaaaaaaatatggtgtaggtagtccatgataaaattaatacttctctttaatctaatagttgaaaa 20351308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 126
Target Start/End: Original strand, 47377533 - 47377646
Alignment:
Q  12 aaaaatatagtgtggatagaccatgataaaattggtactcctctttaatctaatggttaaaaactaatttttccatggtggnnnnnnncaagcctttccc 111  Q
    ||||||||||||||||||||| || ||||||||  |  ||||||| |||||||||| | |||| ||| ||| |||||||||       |   ||||||||    
T  47377533 aaaaatatagtgtggatagactataataaaattaatgttcctcttaaatctaatggctgaaaa-taactttcccatggtgggaaacaactcccctttccc 47377631  T
Q  112 aaattaaatggcacc 126  Q
    |||||||||||||||    
T  47377632 aaattaaatggcacc 47377646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 68
Target Start/End: Complemental strand, 49346221 - 49346164
Alignment:
Q  11 aaaaaatatagtgtggatagaccatgataaaattggtactcctctttaatctaatggt 68  Q
    ||||||| | |||||||||||||||||||||||  || ||||  ||||||||||||||    
T  49346221 aaaaaatgttgtgtggatagaccatgataaaatcagtgctccaatttaatctaatggt 49346164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 74
Target Start/End: Complemental strand, 39429340 - 39429276
Alignment:
Q  10 gaaaaaatatagtgtggatagaccatgataaaattggtactcctctttaatctaatggttaaaaa 74  Q
    |||||||||| |||| |  || |||||||||||||  |||||||| |||||||||||||| ||||    
T  39429340 gaaaaaatatggtgtaggcagtccatgataaaattaatactcctccttaatctaatggttgaaaa 39429276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 97; Significance: 1e-47; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 29006472 - 29006347
Alignment:
Q  1 agagaaagagaaaaaatatagtgtggatagaccatgataaaattggtactcctctttaatctaatggttaaaaactaatttttccatggtggnnnnnnnc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||       |    
T  29006472 agagaaagagaaaaaatatagtgtggatagaccatgataaaattggtactcctctttaatctaatggttaaaaactaactttcccatggtgggaaaaaac 29006373  T
Q  101 aagcctttcccaaattaaatggcacc 126  Q
    ||||||||||||||||||||||||||    
T  29006372 aagcctttcccaaattaaatggcacc 29006347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 29007121 - 29007247
Alignment:
Q  1 agagaaagagaaaa-aatatagtgtggatagaccatgataaaattggtactcctctttaatctaatggttaaaaactaatttttccatggtggnnnnnnn 99  Q
    |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||           
T  29007121 agagaaagagaaaaaaatatagtgtggatagaccatgataaaattagtactcctctttaatctaatggttaaaaactaactttcccatggtgggaaaaaa 29007220  T
Q  100 caagcctttcccaaattaaatggcacc 126  Q
    |||||||||||||||||||||| ||||    
T  29007221 caagcctttcccaaattaaatgacacc 29007247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 126
Target Start/End: Complemental strand, 29314696 - 29314581
Alignment:
Q  11 aaaaaatatagtgtggatagaccatgataaaattg-gtactcctctttaatctaatggttaaaaactaatttttccatggtggnnnnnnncaagcctttc 109  Q
    ||||||||  |||| || ||||||||||||||||| || | ||| ||||||| |||||||||||||||| ||| |||||||||       ||||||||||    
T  29314696 aaaaaatagtgtgttgaaagaccatgataaaattgtgttc-cctatttaatcaaatggttaaaaactaactttcccatggtggaaaaaaacaagcctttc 29314598  T
Q  110 ccaaattaaatggcacc 126  Q
     ||||||||||||||||    
T  29314597 tcaaattaaatggcacc 29314581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 126
Target Start/End: Original strand, 41224776 - 41224891
Alignment:
Q  11 aaaaaatatagtgtggatagaccatgataaaattg-gtactcctctttaatctaatggttaaaaactaatttttccatggtggnnnnnnncaagcctttc 109  Q
    ||||||||  |||| || ||||||||||||||||| || | ||| ||||||| |||||||||||||||| ||| |||||||||        |||||||||    
T  41224776 aaaaaatagtgtgttgaaagaccatgataaaattgtgttc-cctatttaatcaaatggttaaaaactaactttcccatggtgggaaaaaataagcctttc 41224874  T
Q  110 ccaaattaaatggcacc 126  Q
    |||||||||||||||||    
T  41224875 ccaaattaaatggcacc 41224891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 34368138 - 34368212
Alignment:
Q  1 agagaaagagaaaaaa-tatagtgtggatagaccatgataaaattggtactcctctttaatctaatggttaaaaa 74  Q
    |||||||||||||||| ||| || | |||||||||||||||||||  ||| ||||||||||||||||| ||||||    
T  34368138 agagaaagagaaaaaaatattgtatagatagaccatgataaaattaatacacctctttaatctaatggctaaaaa 34368212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 29 - 127
Target Start/End: Complemental strand, 44896143 - 44896045
Alignment:
Q  29 agaccatgataaaattg-gtactcctctttaatctaatggttaaaaactaatttttccatggtggnnnnnnncaagcctttcccaaattaaatggcaccc 127  Q
    ||||||||||||||||| |||| ||| |||||||||||||||||||||||| ||| |||||||||       | || ||||||||||||||| |||||||    
T  44896143 agaccatgataaaattgtgtac-cctatttaatctaatggttaaaaactaactttcccatggtggggaaaaactagtctttcccaaattaaacggcaccc 44896045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 30916420 - 30916486
Alignment:
Q  1 agagaaagagaaaaaatatagtgtggatagaccatgataaaattggtactcctctttaatctaatgg 67  Q
    ||||||||  ||||||||| |||| | ||| |||||||||||||  |||||||||||||||||||||    
T  30916420 agagaaaggaaaaaaatatggtgtaggtagtccatgataaaattaatactcctctttaatctaatgg 30916486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 92
Target Start/End: Complemental strand, 23633034 - 23632957
Alignment:
Q  13 aaaatatagtgtggatagaccatgataaaattggtactcctctttaatctaatggttaaaaactaatttttccatggtgg 92  Q
    |||||| |||||||  ||||||| |||||||   |||||||||||||||||||||| |||||  || |||||||||||||    
T  23633034 aaaataaagtgtgggcagaccatcataaaatctatactcctctttaatctaatggtaaaaaa--aacttttccatggtgg 23632957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 92
Target Start/End: Original strand, 25137907 - 25137940
Alignment:
Q  59 atctaatggttaaaaactaatttttccatggtgg 92  Q
    |||||||||||||||||||||||| |||||||||    
T  25137907 atctaatggttaaaaactaattttcccatggtgg 25137940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 48; Significance: 2e-18; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 126
Target Start/End: Complemental strand, 41092287 - 41092172
Alignment:
Q  11 aaaaaatatagtgtggatagaccatgataaaattg-gtactcctctttaatctaatggttaaaaactaatttttccatggtggnnnnnnncaagcctttc 109  Q
    ||||||||  |||| || ||||||||||||||||| || | ||| ||||||| |||||||||||||||| |||||||||||||       ||||||||||    
T  41092287 aaaaaatagtgtgttgaaagaccatgataaaattgtgttc-cctatttaatcaaatggttaaaaactaacttttccatggtgggaaaaaacaagcctttc 41092189  T
Q  110 ccaaattaaatggcacc 126  Q
    |||||||||||||||||    
T  41092188 ccaaattaaatggcacc 41092172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 126
Target Start/End: Original strand, 35759190 - 35759287
Alignment:
Q  29 agaccatgataaaattg-gtactcctctttaatctaatggttaaaaactaatttttccatggtggnnnnnnncaagcctttcccaaattaaatggcacc 126  Q
    ||||||||||||||||| |||| ||| |||||||||||||||||||||||| ||| |||||||||       | |||||||||| ||||||| ||||||    
T  35759190 agaccatgataaaattgtgtac-cctatttaatctaatggttaaaaactaactttcccatggtggggaaaaaccagcctttccctaattaaacggcacc 35759287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 29 - 92
Target Start/End: Complemental strand, 41348241 - 41348178
Alignment:
Q  29 agaccatgataaaattg-gtactcctctttaatctaatggttaaaaactaatttttccatggtgg 92  Q
    ||||||||||||||||| |||| ||| |||||||||||||||||||||||| ||| |||||||||    
T  41348241 agaccatgataaaattgtgtac-cctatttaatctaatggttaaaaactaactttcccatggtgg 41348178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 64
Target Start/End: Original strand, 8181462 - 8181522
Alignment:
Q  4 gaaagagaaaaaatatagtgtggatagaccatgataaaattggtactcctctttaatctaa 64  Q
    |||||| ||||||||||||||| | |||||||||||||||   ||||| ||||||||||||    
T  8181462 gaaagaaaaaaaatatagtgtgaaaagaccatgataaaatctatactcatctttaatctaa 8181522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 74
Target Start/End: Original strand, 42346060 - 42346102
Alignment:
Q  32 ccatgataaaattggtactcctctttaatctaatggttaaaaa 74  Q
    |||||||||||||  ||||||||||||||||||||||| ||||    
T  42346060 ccatgataaaattaatactcctctttaatctaatggttgaaaa 42346102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 68
Target Start/End: Complemental strand, 5873279 - 5873222
Alignment:
Q  11 aaaaaatatagtgtggatagaccatgataaaattggtactcctctttaatctaatggt 68  Q
    ||||||||||||||||| ||||||| |||||||  ||  |||| ||||||||||||||    
T  5873279 aaaaaatatagtgtggacagaccatcataaaatatgtgttcctttttaatctaatggt 5873222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 92
Target Start/End: Original strand, 30846478 - 30846511
Alignment:
Q  59 atctaatggttaaaaactaatttttccatggtgg 92  Q
    |||||||||||||||||||||||| |||||||||    
T  30846478 atctaatggttaaaaactaattttcccatggtgg 30846511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 92
Target Start/End: Complemental strand, 7054183 - 7054124
Alignment:
Q  32 ccatgataaaattggtactcctctttaatctaatggttaaaaactaatttttccatggtgg 92  Q
    |||||||||||||  |||||||| |||||||||||||| ||||  || |||||||||||||    
T  7054183 ccatgataaaattaatactcctccttaatctaatggttgaaaa-aaacttttccatggtgg 7054124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 74
Target Start/End: Original strand, 7054774 - 7054814
Alignment:
Q  34 atgataaaattggtactcctctttaatctaatggttaaaaa 74  Q
    |||||||||||  ||||||||||||||||||||||| ||||    
T  7054774 atgataaaattaatactcctctttaatctaatggttgaaaa 7054814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 74
Target Start/End: Complemental strand, 42345509 - 42345445
Alignment:
Q  10 gaaaaaatatagtgtggatagaccatgataaaattggtactcctctttaatctaatggttaaaaa 74  Q
    |||||||||| |||| |  || |||||||||||||  |||||||| |||||||||||||| ||||    
T  42345509 gaaaaaatatggtgtaggcagtccatgataaaattaatactcctccttaatctaatggttgaaaa 42345445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 15 - 92
Target Start/End: Original strand, 32321349 - 32321425
Alignment:
Q  15 aatatagtgtggatagaccatgataaaattggtactcctctttaatctaatggttaaaaactaatttttccatggtgg 92  Q
    ||||||||||||| ||| ||||||||||||  ||||||||||||||||||||| |||||| |||||  ||||||||||    
T  32321349 aatatagtgtggaaagatcatgataaaatttatactcctctttaatctaatgg-taaaaattaattgatccatggtgg 32321425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 20313354 - 20313441
Alignment:
Q  1 agagaaagagaaaaaatatagtgtggatagaccatgataaaattggtactcctctttaatctaatggttaaaaactaatttttccatg 88  Q
    ||||||||| |||||||| ||||| | |||||||| |||| ||   ||| |||||||||||||||||| |||| | |||||| |||||    
T  20313354 agagaaagaaaaaaaataaagtgtaggtagaccattataagatcaatacacctctttaatctaatggtaaaaatccaattttcccatg 20313441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 74
Target Start/End: Original strand, 43768714 - 43768756
Alignment:
Q  32 ccatgataaaattggtactcctctttaatctaatggttaaaaa 74  Q
    |||||||||||||  ||||||||||||||||||||||| ||||    
T  43768714 ccatgataaaattaatactcctctttaatctaatggttgaaaa 43768756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 44406321 - 44406255
Alignment:
Q  1 agagaaagagaaaaaatatagtgtggatagaccatgataaaattggtactcctctttaatctaatgg 67  Q
    ||||||||  ||||||||| |||| | ||| |||||||||||||  ||||| |||||||||||||||    
T  44406321 agagaaaggaaaaaaatatggtgtaggtagtccatgataaaattaatactcttctttaatctaatgg 44406255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 92
Target Start/End: Original strand, 45298314 - 45298372
Alignment:
Q  32 ccatgataaaattggtactcctctttaatctaatggttaaaaactaatttttccatggtgg 92  Q
    |||||||||||||| ||| |||||||||||| |||||| ||||  || |||||||||||||    
T  45298314 ccatgataaaattgatacacctctttaatctgatggttgaaaa--aagttttccatggtgg 45298372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 47480631 - 47480566
Alignment:
Q  1 agagaaagagaaaaaatatagtgtggatagaccatgataaaattggtactcctctttaatctaatg 66  Q
    ||||||||  ||||||||| |||| | ||| |||||||||||||  |||||||||||||| |||||    
T  47480631 agagaaaggaaaaaaatatggtgtaggtagtccatgataaaattaatactcctctttaatttaatg 47480566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 8)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 126
Target Start/End: Complemental strand, 16426668 - 16426553
Alignment:
Q  11 aaaaaatatagtgtggatagaccatgataaaattggtactcc-tctttaatctaatggttaaaaactaatttttccatggtggnnnnnnncaagcctttc 109  Q
    ||||||||  |||| || ||||||||||||||||| || ||| |  |||||| |||||||||||| ||| |||||||||||||       ||||||||||    
T  16426668 aaaaaatagtgtgttgaaagaccatgataaaattg-tattccctacttaatcaaatggttaaaaattaacttttccatggtgggaaaaaacaagcctttc 16426570  T
Q  110 ccaaattaaatggcacc 126  Q
    |||||||||||||||||    
T  16426569 ccaaattaaatggcacc 16426553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 2992127 - 2992053
Alignment:
Q  1 agagaaagagaaaaaa-tatagtgtggatagaccatgataaaattggtactcctctttaatctaatggttaaaaa 74  Q
    |||||||||||||||| ||| || | |||||||||||||||||||  ||| ||||||||||||||||| ||||||    
T  2992127 agagaaagagaaaaaaatattgtatagatagaccatgataaaattaatacacctctttaatctaatggctaaaaa 2992053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 11 - 68
Target Start/End: Complemental strand, 17946956 - 17946899
Alignment:
Q  11 aaaaaatatagtgtggatagaccatgataaaattggtactcctctttaatctaatggt 68  Q
    ||||||| |||||||||||||||||||||||||  || ||||  ||||||||||||||    
T  17946956 aaaaaatgtagtgtggatagaccatgataaaatcagtgctccaatttaatctaatggt 17946899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 74
Target Start/End: Original strand, 20991974 - 20992016
Alignment:
Q  32 ccatgataaaattggtactcctctttaatctaatggttaaaaa 74  Q
    |||||||||||||  ||||||||||||||||||||||| ||||    
T  20991974 ccatgataaaattaatactcctctttaatctaatggttgaaaa 20992016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 92
Target Start/End: Complemental strand, 6609617 - 6609584
Alignment:
Q  59 atctaatggttaaaaactaatttttccatggtgg 92  Q
    |||||||||||||||||||| |||||||||||||    
T  6609617 atctaatggttaaaaactaacttttccatggtgg 6609584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 92
Target Start/End: Original strand, 6610021 - 6610058
Alignment:
Q  55 tttaatctaatggttaaaaactaatttttccatggtgg 92  Q
    |||||||||||||||||||||||| ||| |||||||||    
T  6610021 tttaatctaatggttaaaaactaactttcccatggtgg 6610058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 92
Target Start/End: Original strand, 15562018 - 15562055
Alignment:
Q  55 tttaatctaatggttaaaaactaatttttccatggtgg 92  Q
    |||||||||||||||||||||||| ||| |||||||||    
T  15562018 tttaatctaatggttaaaaactaactttcccatggtgg 15562055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 92
Target Start/End: Complemental strand, 16903464 - 16903431
Alignment:
Q  59 atctaatggttaaaaactaatttttccatggtgg 92  Q
    |||||||||||||||||||| |||||||||||||    
T  16903464 atctaatggttaaaaactaacttttccatggtgg 16903431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 8)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 29334871 - 29334937
Alignment:
Q  1 agagaaagagaaaaaatatagtgtggatagaccatgataaaattggtactcctctttaatctaatgg 67  Q
    ||||||||  |||||||||||||| ||||| |||||||||||||  |||||||||||||| ||||||    
T  29334871 agagaaaggaaaaaaatatagtgtagatagtccatgataaaattaatactcctctttaatttaatgg 29334937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 51609506 - 51609432
Alignment:
Q  1 agagaaagagaaaaaa-tatagtgtggatagaccatgataaaattggtactcctctttaatctaatggttaaaaa 74  Q
    |||||||||||||||| ||| |||| |||||||||||||||||||  ||| |||||| |||||||||| ||||||    
T  51609506 agagaaagagaaaaaaatattgtgtagatagaccatgataaaattaatacacctcttcaatctaatggataaaaa 51609432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 36385796 - 36385723
Alignment:
Q  1 agagaaagagaaaaaatatagtgtggatagaccatgataaaattggtactcctctttaatctaatggttaaaaa 74  Q
    ||||||||| ||||||||| |||| |  || | |||||||||||  |||||||||||||||||||||| |||||    
T  36385796 agagaaagaaaaaaaatatggtgtaggcagcctatgataaaattaatactcctctttaatctaatggtaaaaaa 36385723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 74
Target Start/End: Complemental strand, 42383810 - 42383770
Alignment:
Q  34 atgataaaattggtactcctctttaatctaatggttaaaaa 74  Q
    ||||||||||| ||||||||||||||||||||||| |||||    
T  42383810 atgataaaattagtactcctctttaatctaatggtaaaaaa 42383770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 92
Target Start/End: Original strand, 17151853 - 17151894
Alignment:
Q  51 cctctttaatctaatggttaaaaactaatttttccatggtgg 92  Q
    |||||||||||||||||| ||||||||| ||| |||||||||    
T  17151853 cctctttaatctaatggtcaaaaactaactttcccatggtgg 17151894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 41134558 - 41134623
Alignment:
Q  4 gaaagagaaaa-aatatagtgtggatagaccatgataaaattggtactcctctttaatctaatggt 68  Q
    ||||||||||| |||||| ||  || |||||||| |||||||  ||||||||||||||||||||||    
T  41134558 gaaagagaaaataatataatgcagacagaccatggtaaaattaatactcctctttaatctaatggt 41134623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 74
Target Start/End: Complemental strand, 50427538 - 50427474
Alignment:
Q  10 gaaaaaatatagtgtggatagaccatgataaaattggtactcctctttaatctaatggttaaaaa 74  Q
    |||||||||| |||| || ||  ||||||||||||  ||||||| ||||||||||||||| ||||    
T  50427538 gaaaaaatatggtgtagacagttcatgataaaattaatactcctttttaatctaatggttgaaaa 50427474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 74
Target Start/End: Original strand, 50428079 - 50428143
Alignment:
Q  10 gaaaaaatatagtgtggatagaccatgataaaattggtactcctctttaatctaatggttaaaaa 74  Q
    |||||||||| |||| || |  |||||||||||||  |||||||||||||| |||||||| ||||    
T  50428079 gaaaaaatatggtgtagacaatccatgataaaattaatactcctctttaatttaatggttgaaaa 50428143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 126
Target Start/End: Complemental strand, 17454 - 17339
Alignment:
Q  11 aaaaaatatagtgtggatagaccatgataaaattg-gtactcctctttaatctaatggttaaaaactaatttttccatggtggnnnnnnncaagcctttc 109  Q
    ||||||||  |||| || ||||||||||||||||| || | ||| ||| ||| |||||||||||||||| ||| |||||||||       |||||||||     
T  17454 aaaaaatagtgtgttgaaagaccatgataaaattgtgttc-cctatttgatcaaatggttaaaaactaactttcccatggtgggaaaaaacaagcctttt 17356  T
Q  110 ccaaattaaatggcacc 126  Q
    |||||||||||||||||    
T  17355 ccaaattaaatggcacc 17339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 35; Significance: 0.0000000001; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 39950256 - 39950330
Alignment:
Q  1 agagaaagagaaaaaa-tatagtgtggatagaccatgataaaattggtactcctctttaatctaatggttaaaaa 74  Q
    |||||||||||||||| ||| || | |||||||||||||||||||   || ||||||||||||||||| ||||||    
T  39950256 agagaaagagaaaaaaatattgtatagatagaccatgataaaattaacacacctctttaatctaatggctaaaaa 39950330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 74
Target Start/End: Complemental strand, 1969872 - 1969830
Alignment:
Q  32 ccatgataaaattggtactcctctttaatctaatggttaaaaa 74  Q
    |||||||||||||  ||||||||||||||||||||||| ||||    
T  1969872 ccatgataaaattaatactcctctttaatctaatggttgaaaa 1969830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 92
Target Start/End: Complemental strand, 9923479 - 9923422
Alignment:
Q  34 atgataaaattggtactcctctttaatctaatggttaaaaactaatttttccatggtgg 92  Q
    |||||||||||  ||||||||||||||||||||||| ||||  || |||||||||||||    
T  9923479 atgataaaattaatactcctctttaatctaatggttgaaaa-aaacttttccatggtgg 9923422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 18153358 - 18153424
Alignment:
Q  1 agagaaagagaaaaaatatagtgtggatagaccatgataaaattggtactcctctttaatctaatgg 67  Q
    ||||||||| |||||||||  ||| | ||| |||||||||||||  ||||||| |||||||||||||    
T  18153358 agagaaagaaaaaaaatatgttgtaggtagtccatgataaaattaatactcctttttaatctaatgg 18153424  T

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Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 92
Target Start/End: Original strand, 3596275 - 3596308
Alignment:
Q  59 atctaatggttaaaaactaatttttccatggtgg 92  Q
    |||||||||||||||||||||||| |||||||||    
T  3596275 atctaatggttaaaaactaattttcccatggtgg 3596308  T

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Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 92
Target Start/End: Complemental strand, 8320945 - 8320908
Alignment:
Q  55 tttaatctaatggttaaaaactaatttttccatggtgg 92  Q
    |||||||||||||||||||||||| ||| |||||||||    
T  8320945 tttaatctaatggttaaaaactaactttcccatggtgg 8320908  T

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Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 92
Target Start/End: Original strand, 42655722 - 42655755
Alignment:
Q  59 atctaatggttaaaaactaatttttccatggtgg 92  Q
    |||||||||| |||||||||||||||||||||||    
T  42655722 atctaatggtcaaaaactaatttttccatggtgg 42655755  T

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Target: scaffold0129 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 92
Target Start/End: Complemental strand, 42601 - 42520
Alignment:
Q  11 aaaaaatatagtgtggatagaccatgataaaattggtactcctctttaatctaatggttaaaaactaatttttccatggtgg 92  Q
    |||||||||||||  |  |||| ||||||||||||||  |||| ||||||||||||||| ||| | || ||| |||||||||    
T  42601 aaaaaatatagtggagtcagactatgataaaattggtgttcctatttaatctaatggtttaaacccaactttcccatggtgg 42520  T

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Target: chr6 (Bit Score: 29; Significance: 0.0000005; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 92
Target Start/End: Complemental strand, 1034814 - 1034755
Alignment:
Q  33 catgataaaattg-gtactcctctttaatctaatggttaaaaactaatttttccatggtgg 92  Q
    ||||||||||||| |||| ||| |||||||||||||||||||||||| ||| | |||||||    
T  1034814 catgataaaattgtgtac-cctatttaatctaatggttaaaaactaactttcctatggtgg 1034755  T

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Target: chr6; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 12 - 92
Target Start/End: Complemental strand, 24126085 - 24126006
Alignment:
Q  12 aaaaatatagtgtggatagaccatgataaaattggtactcctctttaatctaatggttaaaaactaatttttccatggtgg 92  Q
    ||||||||||||||||||||| || ||||||||  |  ||||||| |||||||||| | |||| ||| ||| |||||||||    
T  24126085 aaaaatatagtgtggatagactataataaaattaatgttcctcttaaatctaatggctgaaaa-taactttcccatggtgg 24126006  T

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