View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF14906_high_4 (Length: 382)
Name: NF14906_high_4
Description: NF14906
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14906_high_4 |
 | |
|
| [»] scaffold0161 (1 HSPs) |
| | |
|
| [»] scaffold0003 (1 HSPs) |
| | |
|
| [»] scaffold0318 (1 HSPs) |
| | |
|
| [»] scaffold0199 (1 HSPs) |
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|
| [»] scaffold1359 (1 HSPs) |
| | |
|
| [»] scaffold0473 (1 HSPs) |
| | |
|
| [»] scaffold0471 (1 HSPs) |
| | |
|
| [»] scaffold0439 (1 HSPs) |
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|
| [»] scaffold0352 (1 HSPs) |
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|
| [»] scaffold0275 (1 HSPs) |
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|
| [»] scaffold0249 (1 HSPs) |
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| [»] scaffold0217 (1 HSPs) |
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| [»] scaffold0069 (1 HSPs) |
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| [»] scaffold0045 (1 HSPs) |
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| [»] scaffold0035 (1 HSPs) |
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| [»] scaffold0022 (1 HSPs) |
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| [»] scaffold0015 (1 HSPs) |
| | |
|
Alignment Details
Target: chr1 (Bit Score: 289; Significance: 1e-162; HSPs: 21)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 289; E-Value: 1e-162
Query Start/End: Original strand, 11 - 366
Target Start/End: Original strand, 2973391 - 2973747
Alignment:
| Q |
11 |
aaaatgagttttgtaccatgtctctaaaagttttgatgataacaaagtattaaa-aataatttaaaatgttaatgtatgtttaagtgtgcatgaccaaat |
109 |
Q |
| |
|
|||||||||||| | | |||||||||||| |||||||||||||||||||||||| |||||||||||||| |||| ||||||||||||||||||||||||| |
|
|
| T |
2973391 |
aaaatgagttttttgcgatgtctctaaaatttttgatgataacaaagtattaaagaataatttaaaatgctaatatatgtttaagtgtgcatgaccaaat |
2973490 |
T |
|
| Q |
110 |
attaaaatttaccgagctctgaagatatataagagcatctaaagctctgaaatcagactaatcagaagtcaacattttgatcagtacattaaagacactt |
209 |
Q |
| |
|
||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| | |||| |
|
|
| T |
2973491 |
attaaaatttaccaagctctaaagatatataagagcatctaaagctctgaaatcagactaaccagaagtcaacattttgatcagtacattaaaaatactt |
2973590 |
T |
|
| Q |
210 |
gttaacaagatcattttatcaagtacattgaagatacttgttagcaagatccttttatcaaacatcttagctttaaattcataggaccaacaactattag |
309 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
2973591 |
gttaacaagatcattttatcaagtacattgaagatacttgttaacaagatccttttatcaaacatcttagctttacattcataggaccaacaactattag |
2973690 |
T |
|
| Q |
310 |
atttgagagaattcaaattgaaacaaattggctagggttataaaactatgaaattag |
366 |
Q |
| |
|
|||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
2973691 |
atttgagataattcaaattgaaacaaattagctagggttataaaactatgaaattag |
2973747 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 11 - 147
Target Start/End: Original strand, 1812428 - 1812564
Alignment:
| Q |
11 |
aaaatgagttttgtaccatgtctctaaaagttttgatgataacaaagtatt-aaaaataatttaaaatgttaatgtatgtttaagtgtgcatgaccaaat |
109 |
Q |
| |
|
||||| || ||||||| |||||||||||| ||||||| |||||||||||| ||||| ||| || ||| |||| |||||||||||||||||||||| | |
|
|
| T |
1812428 |
aaaattagatttgtacaatgtctctaaaa-ttttgattataacaaagtatcgaaaaacaatcgaatatgctaatatatgtttaagtgtgcatgaccataa |
1812526 |
T |
|
| Q |
110 |
attaaaatttaccgagctctgaagatatataagagcat |
147 |
Q |
| |
|
||||||||||| | || ||| || |||||| ||||||| |
|
|
| T |
1812527 |
attaaaatttatcaaggtctaaacatatatgagagcat |
1812564 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 37 - 120
Target Start/End: Complemental strand, 12398205 - 12398121
Alignment:
| Q |
37 |
aaagttttgatgataacaaagtattaaa-aataatttaaaatgttaatgtatgtttaagtgtgcatgaccaaatattaaaattta |
120 |
Q |
| |
|
|||||||||||||||| |||||||| || ||||||| || ||| |||| |||||| ||||||||||||| | | ||||||||||| |
|
|
| T |
12398205 |
aaagttttgatgataataaagtattgaagaataattgaatatgctaatatatgttcaagtgtgcatgactatagattaaaattta |
12398121 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 148
Target Start/End: Original strand, 31584028 - 31584137
Alignment:
| Q |
40 |
gttttgatgataacaaagtattaaa-aataatttaaaatgttaatgtatgtttaagtgtgcatgaccaaatattaaaatttaccgagctctgaagatata |
138 |
Q |
| |
|
|||||||||||||||||||||| || ||||||| | |||||||| || ||||||||||| ||||| | ||||||||||| | || ||||| ||||| |
|
|
| T |
31584028 |
gttttgatgataacaaagtattgaagaataattggatatgttaatacgtgcttaagtgtgcaggaccatagattaaaatttatcaaggtctgagcatata |
31584127 |
T |
|
| Q |
139 |
taagagcatc |
148 |
Q |
| |
|
| |||||||| |
|
|
| T |
31584128 |
tgagagcatc |
31584137 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 10751612 - 10751569
Alignment:
| Q |
20 |
tttgtaccatgtctctaaaagttttgatgataacaaagtattaaa |
64 |
Q |
| |
|
||||||| ||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
10751612 |
tttgtacaatgtctctaaa-gttttgatgataacaaagtattaaa |
10751569 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 38 - 120
Target Start/End: Complemental strand, 34188240 - 34188157
Alignment:
| Q |
38 |
aagttttgatgataacaaagtatt-aaaaataatttaaaatgttaatgtatgtttaagtgtgcatgaccaaatattaaaattta |
120 |
Q |
| |
|
|||||||||||||||||||||||| ||||| |||| || ||| |||| |||||||| | ||||| ||||| | |||| |||||| |
|
|
| T |
34188240 |
aagttttgatgataacaaagtattgaaaaacaattgaatatgctaatatatgtttacgcgtgcaggaccatagattataattta |
34188157 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 38 - 98
Target Start/End: Complemental strand, 35896532 - 35896470
Alignment:
| Q |
38 |
aagttttgatgataacaaagtattaaa--aataatttaaaatgttaatgtatgtttaagtgtg |
98 |
Q |
| |
|
||||||||||||||| ||||||||||| || |||| || ||||||||||||||| ||||||| |
|
|
| T |
35896532 |
aagttttgatgataagaaagtattaaaagaacaattgaatatgttaatgtatgttcaagtgtg |
35896470 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 67
Target Start/End: Original strand, 7744676 - 7744709
Alignment:
| Q |
34 |
ctaaaagttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||| |
|
|
| T |
7744676 |
ctaagagttttgatgataacaaagtattaaaaat |
7744709 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 67
Target Start/End: Complemental strand, 2268998 - 2268966
Alignment:
| Q |
35 |
taaaagttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||| ||||||||||| |
|
|
| T |
2268998 |
taaaagttttgatgataacaaggtattaaaaat |
2268966 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 80 - 148
Target Start/End: Complemental strand, 15441051 - 15440983
Alignment:
| Q |
80 |
taatgtatgtttaagtgtgcatgaccaaatattaaaatttaccgagctctgaagatatataagagcatc |
148 |
Q |
| |
|
|||| |||| ||||||||||||||||| | ||||||||||| | | |||||| ||||| ||||||||| |
|
|
| T |
15441051 |
taatatatgcttaagtgtgcatgaccataaattaaaatttatcaaagtctgaacatatacaagagcatc |
15440983 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 67
Target Start/End: Complemental strand, 17371529 - 17371501
Alignment:
| Q |
39 |
agttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
17371529 |
agttttgatgataacaaagtattaaaaat |
17371501 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 70
Target Start/End: Original strand, 19063434 - 19063466
Alignment:
| Q |
38 |
aagttttgatgataacaaagtattaaaaataat |
70 |
Q |
| |
|
|||||||||||||||||| |||||||||||||| |
|
|
| T |
19063434 |
aagttttgatgataacaaggtattaaaaataat |
19063466 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 67
Target Start/End: Original strand, 21120683 - 21120711
Alignment:
| Q |
39 |
agttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
21120683 |
agttttgatgataacaaagtattaaaaat |
21120711 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 67
Target Start/End: Original strand, 21134779 - 21134807
Alignment:
| Q |
39 |
agttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
21134779 |
agttttgatgataacaaagtattaaaaat |
21134807 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 67
Target Start/End: Original strand, 21204544 - 21204572
Alignment:
| Q |
39 |
agttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
21204544 |
agttttgatgataacaaagtattaaaaat |
21204572 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 67
Target Start/End: Complemental strand, 23025229 - 23025201
Alignment:
| Q |
39 |
agttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
23025229 |
agttttgatgataacaaagtattaaaaat |
23025201 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 67
Target Start/End: Original strand, 25448147 - 25448175
Alignment:
| Q |
39 |
agttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
25448147 |
agttttgatgataacaaagtattaaaaat |
25448175 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 67
Target Start/End: Complemental strand, 28380472 - 28380444
Alignment:
| Q |
39 |
agttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
28380472 |
agttttgatgataacaaagtattaaaaat |
28380444 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 67
Target Start/End: Complemental strand, 36134640 - 36134612
Alignment:
| Q |
39 |
agttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
36134640 |
agttttgatgataacaaagtattaaaaat |
36134612 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 67
Target Start/End: Original strand, 44821156 - 44821184
Alignment:
| Q |
39 |
agttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
44821156 |
agttttgatgataacaaagtattaaaaat |
44821184 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 67
Target Start/End: Original strand, 48569825 - 48569853
Alignment:
| Q |
39 |
agttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
48569825 |
agttttgatgataacaaagtattaaaaat |
48569853 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 54; Significance: 6e-22; HSPs: 20)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 38 - 154
Target Start/End: Complemental strand, 12863847 - 12863730
Alignment:
| Q |
38 |
aagttttgatgataacaaagtattaaa-aataatttaaaatgttaatgtatgtttaagtgtgcatgaccaaatattaaaatttaccgagctctgaagata |
136 |
Q |
| |
|
|||||||||||||||||||||||| || || |||| | |||||||| | |||||||||||||| ||||| ||||||||||||| || |||||| ||| |
|
|
| T |
12863847 |
aagttttgatgataacaaagtattgaacaacaattggatatgttaatatgtgtttaagtgtgcaggaccatatattaaaatttattaaggtctgaacata |
12863748 |
T |
|
| Q |
137 |
tataagagcatctaaagc |
154 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
12863747 |
tataagagcatctaaagc |
12863730 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 40 - 154
Target Start/End: Complemental strand, 28890731 - 28890616
Alignment:
| Q |
40 |
gttttgatgataacaaagtattaaa-aataatttaaaatgttaatgtatgtttaagtgtgcatgaccaaatattaaaatttaccgagctctgaagatata |
138 |
Q |
| |
|
||||||||||||||||||||||||| ||||||| | ||| |||| ||| |||||||||||| ||||| | ||||||||| | | || |||| | || || |
|
|
| T |
28890731 |
gttttgatgataacaaagtattaaagaataattggatatgctaatatatatttaagtgtgcaggaccatagattaaaattcaacaaggtctggacatgta |
28890632 |
T |
|
| Q |
139 |
taagagcatctaaagc |
154 |
Q |
| |
|
|||||||||| ||||| |
|
|
| T |
28890631 |
taagagcatcaaaagc |
28890616 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 38 - 148
Target Start/End: Original strand, 7321030 - 7321141
Alignment:
| Q |
38 |
aagttttgatgataacaaagtattaaa-aataatttaaaatgttaatgtatgtttaagtgtgcatgaccaaatattaaaatttaccgagctctgaagata |
136 |
Q |
| |
|
|||||||||||||||||||||||| || || |||| | ||| |||| |||||||||||||||| ||||| | ||||||||| | | || |||||| || |
|
|
| T |
7321030 |
aagttttgatgataacaaagtattgaagaactattttatatgctaatatatgtttaagtgtgcacgaccatagattaaaattcatcaaggtctgaacatg |
7321129 |
T |
|
| Q |
137 |
tataagagcatc |
148 |
Q |
| |
|
||| |||||||| |
|
|
| T |
7321130 |
tatgagagcatc |
7321141 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 148
Target Start/End: Original strand, 24308550 - 24308659
Alignment:
| Q |
40 |
gttttgatgataacaaagtattaaa-aataatttaaaatgttaatgtatgtttaagtgtgcatgaccaaatattaaaatttaccgagctctgaagatata |
138 |
Q |
| |
|
||||||||||||||||||||||||| || |||| | |||| ||| |||||| ||||| ||| ||||| | ||||||||||| | || | |||| || || |
|
|
| T |
24308550 |
gttttgatgataacaaagtattaaataaaaattggatatgtgaatatatgttcaagtgcgcaggaccataaattaaaatttaacaaggtttgaacatgta |
24308649 |
T |
|
| Q |
139 |
taagagcatc |
148 |
Q |
| |
|
|||||||||| |
|
|
| T |
24308650 |
taagagcatc |
24308659 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 148
Target Start/End: Original strand, 18527777 - 18527889
Alignment:
| Q |
37 |
aaagttttgatgataacaaagtattaaa-aataatttaaaatgttaatgtatgtttaagtgtgcatgaccaaatattaaaatttaccgagctctgaagat |
135 |
Q |
| |
|
||||||||||| ||||||| ||||||| || |||| | ||| ||| |||||||||||||||| || || | ||||||||||| | || |||||| || |
|
|
| T |
18527777 |
aaagttttgattataacaagatattaaagaacaattagatatgctaaaatatgtttaagtgtgcaggatcatagattaaaatttatcaaggtctgaacat |
18527876 |
T |
|
| Q |
136 |
atataagagcatc |
148 |
Q |
| |
|
||||||||||||| |
|
|
| T |
18527877 |
atataagagcatc |
18527889 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 67
Target Start/End: Complemental strand, 1745614 - 1745586
Alignment:
| Q |
39 |
agttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
1745614 |
agttttgatgataacaaagtattaaaaat |
1745586 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 67
Target Start/End: Complemental strand, 6408178 - 6408150
Alignment:
| Q |
39 |
agttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
6408178 |
agttttgatgataacaaagtattaaaaat |
6408150 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 67
Target Start/End: Original strand, 13430326 - 13430354
Alignment:
| Q |
39 |
agttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
13430326 |
agttttgatgataacaaagtattaaaaat |
13430354 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 67
Target Start/End: Original strand, 14989149 - 14989177
Alignment:
| Q |
39 |
agttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
14989149 |
agttttgatgataacaaagtattaaaaat |
14989177 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 67
Target Start/End: Original strand, 15335734 - 15335762
Alignment:
| Q |
39 |
agttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
15335734 |
agttttgatgataacaaagtattaaaaat |
15335762 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 67
Target Start/End: Original strand, 15424799 - 15424827
Alignment:
| Q |
39 |
agttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
15424799 |
agttttgatgataacaaagtattaaaaat |
15424827 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 67
Target Start/End: Original strand, 15516103 - 15516131
Alignment:
| Q |
39 |
agttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
15516103 |
agttttgatgataacaaagtattaaaaat |
15516131 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 67
Target Start/End: Complemental strand, 21288857 - 21288829
Alignment:
| Q |
39 |
agttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
21288857 |
agttttgatgataacaaagtattaaaaat |
21288829 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 67
Target Start/End: Complemental strand, 21301476 - 21301448
Alignment:
| Q |
39 |
agttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
21301476 |
agttttgatgataacaaagtattaaaaat |
21301448 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 67
Target Start/End: Original strand, 22461316 - 22461344
Alignment:
| Q |
39 |
agttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
22461316 |
agttttgatgataacaaagtattaaaaat |
22461344 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 70
Target Start/End: Complemental strand, 23339542 - 23339510
Alignment:
| Q |
38 |
aagttttgatgataacaaagtattaaaaataat |
70 |
Q |
| |
|
|||||||||||||||||| |||||||||||||| |
|
|
| T |
23339542 |
aagttttgatgataacaaggtattaaaaataat |
23339510 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 67
Target Start/End: Complemental strand, 26833515 - 26833487
Alignment:
| Q |
39 |
agttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
26833515 |
agttttgatgataacaaagtattaaaaat |
26833487 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 67
Target Start/End: Complemental strand, 36105687 - 36105659
Alignment:
| Q |
39 |
agttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
36105687 |
agttttgatgataacaaagtattaaaaat |
36105659 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 67
Target Start/End: Complemental strand, 43640252 - 43640224
Alignment:
| Q |
39 |
agttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
43640252 |
agttttgatgataacaaagtattaaaaat |
43640224 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 67
Target Start/End: Complemental strand, 45293069 - 45293041
Alignment:
| Q |
39 |
agttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
45293069 |
agttttgatgataacaaagtattaaaaat |
45293041 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 44; Significance: 6e-16; HSPs: 27)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 38 - 148
Target Start/End: Complemental strand, 4515116 - 4515005
Alignment:
| Q |
38 |
aagttttgatgataacaaagtatt-aaaaataatttaaaatgttaatgtatgtttaagtgtgcatgaccaaatattaaaatttaccgagctctgaagata |
136 |
Q |
| |
|
|||| ||||||||||||||||||| ||||| || | | |||||||| |||||| ||||||||| ||||| ||||||||||||| | || |||||| || |
|
|
| T |
4515116 |
aagtattgatgataacaaagtattgaaaaacaactggatatgttaatatatgttcaagtgtgcaggaccatatattaaaatttaacaaggtctgaacatg |
4515017 |
T |
|
| Q |
137 |
tataagagcatc |
148 |
Q |
| |
|
|||||||||||| |
|
|
| T |
4515016 |
tataagagcatc |
4515005 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 41 - 148
Target Start/End: Original strand, 14426905 - 14427013
Alignment:
| Q |
41 |
ttttgatgataacaaagtattaaa-aataatttaaaatgttaatgtatgtttaagtgtgcatgaccaaatattaaaatttaccgagctctgaagatatat |
139 |
Q |
| |
|
|||||||||||||||||||||||| || |||| | ||| |||| |||||| ||||||||| ||||||| ||||||||||| | | |||||| || ||| |
|
|
| T |
14426905 |
ttttgatgataacaaagtattaaagaacaattggatatgctaatatatgttcaagtgtgcaggaccaaagattaaaatttaacaaagtctgaaaatgtat |
14427004 |
T |
|
| Q |
140 |
aagagcatc |
148 |
Q |
| |
|
||||||||| |
|
|
| T |
14427005 |
aagagcatc |
14427013 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 38 - 148
Target Start/End: Complemental strand, 9796611 - 9796500
Alignment:
| Q |
38 |
aagttttgatgataacaaagtattaaa-aataatttaaaatgttaatgtatgtttaagtgtgcatgaccaaatattaaaatttaccgagctctgaagata |
136 |
Q |
| |
|
||||||||||||||| ||||||||||| || |||| | |||||||| |||||| ||||||||| || || | ||||||||||| | || |||||| || |
|
|
| T |
9796611 |
aagttttgatgataataaagtattaaagaacaattggatatgttaatatatgttcaagtgtgcaggatcatagattaaaatttaacaaggtctgaacatg |
9796512 |
T |
|
| Q |
137 |
tataagagcatc |
148 |
Q |
| |
|
|||||||||||| |
|
|
| T |
9796511 |
tataagagcatc |
9796500 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 120
Target Start/End: Complemental strand, 17119466 - 17119385
Alignment:
| Q |
40 |
gttttgatgataacaaagtattaaa-aataatttaaaatgttaatgtatgtttaagtgtgcatgaccaaatattaaaattta |
120 |
Q |
| |
|
||||| ||||||||||||||||||| || |||| |||||||| |||||||||||||||| ||||| | ||||||||||| |
|
|
| T |
17119466 |
gtttttatgataacaaagtattaaagaactatttggtatgttaatatatgtttaagtgtgcaggaccatagattaaaattta |
17119385 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 67
Target Start/End: Complemental strand, 46828540 - 46828508
Alignment:
| Q |
35 |
taaaagttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |
|
|
| T |
46828540 |
taaaagttttgatgataacaaagtattaaaaat |
46828508 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 40 - 146
Target Start/End: Original strand, 4767355 - 4767462
Alignment:
| Q |
40 |
gttttgatgataacaaagtattaaa-aataatttaaaatgttaatgtatgtttaagtgtgcatgaccaaatattaaaatttaccgagctctgaagatata |
138 |
Q |
| |
|
||||||||||||||||||||||||| ||||||| | ||| |||| |||||| ||||||||| ||| | | ||| ||||||| | || |||||| || || |
|
|
| T |
4767355 |
gttttgatgataacaaagtattaaagaataattagatatgctaatatatgttcaagtgtgcaggacgatagatttaaatttaacaaggtctgaacatgta |
4767454 |
T |
|
| Q |
139 |
taagagca |
146 |
Q |
| |
|
||| |||| |
|
|
| T |
4767455 |
taacagca |
4767462 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 67
Target Start/End: Original strand, 18118355 - 18118385
Alignment:
| Q |
37 |
aaagttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
18118355 |
aaagttttgatgataacaaagtattaaaaat |
18118385 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 120
Target Start/End: Original strand, 20311360 - 20311442
Alignment:
| Q |
39 |
agttttgatgataacaaagta-ttaaaaataatttaaaatgttaatgtatgtttaagtgtgcatgaccaaatattaaaattta |
120 |
Q |
| |
|
||||||||||||||||||||| |||| || |||| | ||| |||| |||||| ||||||||||||||| | | ||||||||| |
|
|
| T |
20311360 |
agttttgatgataacaaagtatttaagaacaattggatatgctaatatatgttcaagtgtgcatgaccataaaataaaattta |
20311442 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 31375688 - 31375635
Alignment:
| Q |
11 |
aaaatgagttttgtaccatgtctctaaaagttttgatgataacaaagtattaaaa |
65 |
Q |
| |
|
|||||| ||||||||||||| |||| || |||||||||||||||| ||||||||| |
|
|
| T |
31375688 |
aaaatgggttttgtaccatgcctctgaa-gttttgatgataacaaggtattaaaa |
31375635 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 67
Target Start/End: Original strand, 1727717 - 1727745
Alignment:
| Q |
39 |
agttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
1727717 |
agttttgatgataacaaagtattaaaaat |
1727745 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 67
Target Start/End: Complemental strand, 2785560 - 2785532
Alignment:
| Q |
39 |
agttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
2785560 |
agttttgatgataacaaagtattaaaaat |
2785532 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 67
Target Start/End: Complemental strand, 5216455 - 5216427
Alignment:
| Q |
39 |
agttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
5216455 |
agttttgatgataacaaagtattaaaaat |
5216427 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 67
Target Start/End: Original strand, 9390801 - 9390829
Alignment:
| Q |
39 |
agttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
9390801 |
agttttgatgataacaaagtattaaaaat |
9390829 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 67
Target Start/End: Original strand, 11907933 - 11907961
Alignment:
| Q |
39 |
agttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
11907933 |
agttttgatgataacaaagtattaaaaat |
11907961 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 67
Target Start/End: Complemental strand, 14008052 - 14008024
Alignment:
| Q |
39 |
agttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
14008052 |
agttttgatgataacaaagtattaaaaat |
14008024 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 67
Target Start/End: Complemental strand, 14955928 - 14955896
Alignment:
| Q |
35 |
taaaagttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
|||||||||| |||||||||||||||||||||| |
|
|
| T |
14955928 |
taaaagttttaatgataacaaagtattaaaaat |
14955896 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 67
Target Start/End: Complemental strand, 15833859 - 15833831
Alignment:
| Q |
39 |
agttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
15833859 |
agttttgatgataacaaagtattaaaaat |
15833831 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 67
Target Start/End: Complemental strand, 15851405 - 15851377
Alignment:
| Q |
39 |
agttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
15851405 |
agttttgatgataacaaagtattaaaaat |
15851377 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 67
Target Start/End: Original strand, 19249100 - 19249128
Alignment:
| Q |
39 |
agttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
19249100 |
agttttgatgataacaaagtattaaaaat |
19249128 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 67
Target Start/End: Original strand, 21636351 - 21636379
Alignment:
| Q |
39 |
agttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
21636351 |
agttttgatgataacaaagtattaaaaat |
21636379 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 67
Target Start/End: Original strand, 24775192 - 24775220
Alignment:
| Q |
39 |
agttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
24775192 |
agttttgatgataacaaagtattaaaaat |
24775220 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 92 - 148
Target Start/End: Original strand, 38076077 - 38076133
Alignment:
| Q |
92 |
aagtgtgcatgaccaaatattaaaatttaccgagctctgaagatatataagagcatc |
148 |
Q |
| |
|
|||||||||| |||| ||||||||||||| | || |||||| || |||||||||||| |
|
|
| T |
38076077 |
aagtgtgcataaccatatattaaaatttaacaaggtctgaacatgtataagagcatc |
38076133 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 67
Target Start/End: Complemental strand, 40851428 - 40851400
Alignment:
| Q |
39 |
agttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
40851428 |
agttttgatgataacaaagtattaaaaat |
40851400 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 67
Target Start/End: Original strand, 46796078 - 46796106
Alignment:
| Q |
39 |
agttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
46796078 |
agttttgatgataacaaagtattaaaaat |
46796106 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 67
Target Start/End: Original strand, 49642472 - 49642500
Alignment:
| Q |
39 |
agttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
49642472 |
agttttgatgataacaaagtattaaaaat |
49642500 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 67
Target Start/End: Original strand, 49666089 - 49666117
Alignment:
| Q |
39 |
agttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
49666089 |
agttttgatgataacaaagtattaaaaat |
49666117 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 67
Target Start/End: Complemental strand, 49990742 - 49990710
Alignment:
| Q |
35 |
taaaagttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||| ||||||||||| |
|
|
| T |
49990742 |
taaaagttttgatgataacaatgtattaaaaat |
49990710 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 21)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 120
Target Start/End: Original strand, 8677229 - 8677311
Alignment:
| Q |
39 |
agttttgatgataacaaagtatt-aaaaataatttaaaatgttaatgtatgtttaagtgtgcatgaccaaatattaaaattta |
120 |
Q |
| |
|
||||||||||||||||||||||| ||||| |||| || |||||||| |||||| ||||||||| || || ||||||||||||| |
|
|
| T |
8677229 |
agttttgatgataacaaagtattaaaaaacaattgaatatgttaatatatgttcaagtgtgcaagatcacatattaaaattta |
8677311 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 39 - 148
Target Start/End: Complemental strand, 19053654 - 19053544
Alignment:
| Q |
39 |
agttttgatgataacaaa-gtattaaaaataatttaaaatgttaatgtatgtttaagtgtgcatgaccaaatattaaaatttaccgagctctgaagatat |
137 |
Q |
| |
|
|||||||||||||||||| ||||||| || |||| | ||| |||| |||||| |||||||| ||||| | ||||||||||| | || |||||| |||| |
|
|
| T |
19053654 |
agttttgatgataacaaaagtattaagaacaattagatatgctaatatatgttcaagtgtgctggaccataaattaaaatttaacaaggtctgaaaatat |
19053555 |
T |
|
| Q |
138 |
ataagagcatc |
148 |
Q |
| |
|
||||||||||| |
|
|
| T |
19053554 |
ataagagcatc |
19053544 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 80 - 148
Target Start/End: Complemental strand, 12380572 - 12380504
Alignment:
| Q |
80 |
taatgtatgtttaagtgtgcatgaccaaatattaaaatttaccgagctctgaagatatataagagcatc |
148 |
Q |
| |
|
|||| |||||||||||||||||||||| ||||||||||||| | || ||||| || |||||||||||| |
|
|
| T |
12380572 |
taatatatgtttaagtgtgcatgaccatatattaaaatttaacaagttctgagcatgtataagagcatc |
12380504 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 153
Target Start/End: Complemental strand, 11545647 - 11545532
Alignment:
| Q |
39 |
agttttgatgataacaaagtatt-aaaaataatttaaaatgttaatgtatgtttaagtgtgcatgaccaaatattaaaatttaccgagctctgaagatat |
137 |
Q |
| |
|
|||||||||||||||| | |||| ||||| |||| | |||||||| |||||| ||||||||| ||||| ||||||||||||| || |||||| || | |
|
|
| T |
11545647 |
agttttgatgataacacaatattgaaaaacaattggacatgttaatatatgttcaagtgtgcaggaccatatattaaaatttaataaggtctgaacatgt |
11545548 |
T |
|
| Q |
138 |
ataagagcatctaaag |
153 |
Q |
| |
|
| ||||||||| |||| |
|
|
| T |
11545547 |
aaaagagcatcaaaag |
11545532 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 120
Target Start/End: Complemental strand, 23088084 - 23088003
Alignment:
| Q |
41 |
ttttgatgataacaaagtattaaaaat--aatttaaaatgttaatgtatgtttaagtgtgcatgaccaaatattaaaattta |
120 |
Q |
| |
|
|||||||||||||||||||||||| || |||| || |||||||| | |||| ||||||||| ||||| ||| ||||||||| |
|
|
| T |
23088084 |
ttttgatgataacaaagtattaaacattcaattgaatatgttaatatttgttcaagtgtgcaggaccatatactaaaattta |
23088003 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 144
Target Start/End: Original strand, 17473752 - 17473861
Alignment:
| Q |
37 |
aaagttttgatgataacaaa-gtattaaaaataatttaaa-atgttaatgtatgtttaagtgtgcatgaccaaatattaaaatttaccgagctctgaaga |
134 |
Q |
| |
|
|||||||||||||||| ||| |||||||| | || ||||| |||||||| |||||| ||||||||| || || | ||||||||||| | || |||||| | |
|
|
| T |
17473752 |
aaagttttgatgataataaaagtattaaagaaaaattaaatatgttaatatatgttcaagtgtgcaggaacataaattaaaatttaacaaggtctgaaca |
17473851 |
T |
|
| Q |
135 |
tatataagag |
144 |
Q |
| |
|
| |||||||| |
|
|
| T |
17473852 |
tgtataagag |
17473861 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 67
Target Start/End: Complemental strand, 6517954 - 6517922
Alignment:
| Q |
35 |
taaaagttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |
|
|
| T |
6517954 |
taaaagttttgatgataacaaagtattaaaaat |
6517922 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 154
Target Start/End: Original strand, 11449107 - 11449223
Alignment:
| Q |
39 |
agttttgatgataacaaagtattaaa-aataatttaaaatgttaatgtatgtttaagtgtgcatgaccaaatattaaaatttaccgagctctgaagatat |
137 |
Q |
| |
|
|||||||||||||||| | |||| || || |||| | |||||||| |||||| ||||||||| ||||| ||||||||||||| || |||||| || | |
|
|
| T |
11449107 |
agttttgatgataacacaatattgaagaacaattggacatgttaatatatgttcaagtgtgcaggaccatatattaaaatttaataaggtctgaacatgt |
11449206 |
T |
|
| Q |
138 |
ataagagcatctaaagc |
154 |
Q |
| |
|
| ||||||||| ||||| |
|
|
| T |
11449207 |
aaaagagcatcaaaagc |
11449223 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 108
Target Start/End: Complemental strand, 11442858 - 11442788
Alignment:
| Q |
38 |
aagttttgatgataacaaagtattaaaaataatttaaaatgttaatgtatgtttaagtgtgcatgaccaaa |
108 |
Q |
| |
|
||||||||||||||||||| ||| || || |||| || |||||||||| |||| |||||| ||||||||| |
|
|
| T |
11442858 |
aagttttgatgataacaaactataaagaacaattgaatatgttaatgtgtgttcgagtgtgtatgaccaaa |
11442788 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 108
Target Start/End: Original strand, 11550837 - 11550907
Alignment:
| Q |
38 |
aagttttgatgataacaaagtattaaaaataatttaaaatgttaatgtatgtttaagtgtgcatgaccaaa |
108 |
Q |
| |
|
||||||||||||||||||| ||| || || |||| || |||||||||| |||| |||||| ||||||||| |
|
|
| T |
11550837 |
aagttttgatgataacaaactataaagaacaattgaatatgttaatgtgtgttcgagtgtgtatgaccaaa |
11550907 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 148
Target Start/End: Complemental strand, 11420164 - 11420055
Alignment:
| Q |
40 |
gttttgatgataacaaagtattaaa-aataatttaaaatgttaatgtatgtttaagtgtgcatgaccaaatattaaaatttaccgagctctgaagatata |
138 |
Q |
| |
|
||||||||||||||||| ||||||| || |||| | ||| |||| |||||| |||||| | ||||| ||||||||||||| | || |||||| || || |
|
|
| T |
11420164 |
gttttgatgataacaaaatattaaagaacaattggatatgataatatatgttcaagtgtaaaggaccatatattaaaatttaacaaggtctgaacatgta |
11420065 |
T |
|
| Q |
139 |
taagagcatc |
148 |
Q |
| |
|
||||| |||| |
|
|
| T |
11420064 |
taagaacatc |
11420055 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 67
Target Start/End: Original strand, 17398328 - 17398357
Alignment:
| Q |
38 |
aagttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
17398328 |
aagttttgatgataacaaagtattaaaaat |
17398357 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 67
Target Start/End: Original strand, 24027687 - 24027716
Alignment:
| Q |
38 |
aagttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
24027687 |
aagttttgatgataacaaagtattaaaaat |
24027716 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 67
Target Start/End: Complemental strand, 1672874 - 1672846
Alignment:
| Q |
39 |
agttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
1672874 |
agttttgatgataacaaagtattaaaaat |
1672846 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 67
Target Start/End: Complemental strand, 1675349 - 1675321
Alignment:
| Q |
39 |
agttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
1675349 |
agttttgatgataacaaagtattaaaaat |
1675321 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 67
Target Start/End: Original strand, 3498189 - 3498217
Alignment:
| Q |
39 |
agttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
3498189 |
agttttgatgataacaaagtattaaaaat |
3498217 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 67
Target Start/End: Complemental strand, 16853939 - 16853911
Alignment:
| Q |
39 |
agttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
16853939 |
agttttgatgataacaaagtattaaaaat |
16853911 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 67
Target Start/End: Original strand, 17700443 - 17700471
Alignment:
| Q |
39 |
agttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
17700443 |
agttttgatgataacaaagtattaaaaat |
17700471 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 67
Target Start/End: Complemental strand, 22191302 - 22191274
Alignment:
| Q |
39 |
agttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
22191302 |
agttttgatgataacaaagtattaaaaat |
22191274 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 67
Target Start/End: Complemental strand, 40861137 - 40861109
Alignment:
| Q |
39 |
agttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
40861137 |
agttttgatgataacaaagtattaaaaat |
40861109 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 67
Target Start/End: Complemental strand, 55732254 - 55732226
Alignment:
| Q |
39 |
agttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
55732254 |
agttttgatgataacaaagtattaaaaat |
55732226 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 16)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 41 - 148
Target Start/End: Original strand, 24837993 - 24838101
Alignment:
| Q |
41 |
ttttgatgataacaaagtattaaaaat-aatttaaaatgttaatgtatgtttaagtgtgcatgaccaaatattaaaatttaccgagctctgaagatatat |
139 |
Q |
| |
|
|||||||||||||||||||||||| || |||| | |||||||| |||| | |||||||||||| | || ||||||||||| | || |||||| || ||| |
|
|
| T |
24837993 |
ttttgatgataacaaagtattaaacatcaattggatatgttaatatatgatcaagtgtgcatgatcgaagattaaaatttaacaaggtctgaacatgtat |
24838092 |
T |
|
| Q |
140 |
aagagcatc |
148 |
Q |
| |
|
||||||||| |
|
|
| T |
24838093 |
aagagcatc |
24838101 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 120
Target Start/End: Complemental strand, 16182732 - 16182650
Alignment:
| Q |
39 |
agttttgatgataacaaagtattaaa-aataatttaaaatgttaatgtatgtttaagtgtgcatgaccaaatattaaaattta |
120 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||| | || |||| |||||| ||||||||| ||| | ||| ||||||||| |
|
|
| T |
16182732 |
agttttgatgataacaaagtattaaagaataattggatgtgctaatatatgttaaagtgtgcaagactatataataaaattta |
16182650 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 67
Target Start/End: Complemental strand, 24926700 - 24926671
Alignment:
| Q |
38 |
aagttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
24926700 |
aagttttgatgataacaaagtattaaaaat |
24926671 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 67
Target Start/End: Complemental strand, 39491476 - 39491447
Alignment:
| Q |
38 |
aagttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
39491476 |
aagttttgatgataacaaagtattaaaaat |
39491447 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 67
Target Start/End: Complemental strand, 39502683 - 39502654
Alignment:
| Q |
38 |
aagttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
39502683 |
aagttttgatgataacaaagtattaaaaat |
39502654 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 67
Target Start/End: Original strand, 2152613 - 2152641
Alignment:
| Q |
39 |
agttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
2152613 |
agttttgatgataacaaagtattaaaaat |
2152641 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 67
Target Start/End: Original strand, 3245112 - 3245140
Alignment:
| Q |
39 |
agttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
3245112 |
agttttgatgataacaaagtattaaaaat |
3245140 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 67
Target Start/End: Complemental strand, 4887469 - 4887441
Alignment:
| Q |
39 |
agttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
4887469 |
agttttgatgataacaaagtattaaaaat |
4887441 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 67
Target Start/End: Complemental strand, 11994376 - 11994348
Alignment:
| Q |
39 |
agttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
11994376 |
agttttgatgataacaaagtattaaaaat |
11994348 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 67
Target Start/End: Complemental strand, 15517435 - 15517407
Alignment:
| Q |
39 |
agttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
15517435 |
agttttgatgataacaaagtattaaaaat |
15517407 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 67
Target Start/End: Complemental strand, 21660686 - 21660658
Alignment:
| Q |
39 |
agttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
21660686 |
agttttgatgataacaaagtattaaaaat |
21660658 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 67
Target Start/End: Original strand, 23306562 - 23306590
Alignment:
| Q |
39 |
agttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
23306562 |
agttttgatgataacaaagtattaaaaat |
23306590 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 67
Target Start/End: Original strand, 29138082 - 29138110
Alignment:
| Q |
39 |
agttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
29138082 |
agttttgatgataacaaagtattaaaaat |
29138110 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 67
Target Start/End: Original strand, 30115564 - 30115592
Alignment:
| Q |
39 |
agttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
30115564 |
agttttgatgataacaaagtattaaaaat |
30115592 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 67
Target Start/End: Complemental strand, 33933788 - 33933760
Alignment:
| Q |
39 |
agttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
33933788 |
agttttgatgataacaaagtattaaaaat |
33933760 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 67
Target Start/End: Original strand, 35985910 - 35985938
Alignment:
| Q |
39 |
agttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
35985910 |
agttttgatgataacaaagtattaaaaat |
35985938 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 13)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 31 - 120
Target Start/End: Original strand, 4031194 - 4031283
Alignment:
| Q |
31 |
tctctaaaagttttgatgataacaaagtattaaa-aataatttaaaatgttaatgtatgtttaagtgtgcatgaccaaatattaaaattta |
120 |
Q |
| |
|
||||||||| |||||||||||| ||||||||||| ||||||| | ||||||| |||||| |||||||||||| || ||||||||||||| |
|
|
| T |
4031194 |
tctctaaaa-ttttgatgataataaagtattaaagaataattagatgtgttaatatatgttcaagtgtgcatgatcatatattaaaattta |
4031283 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 20 - 97
Target Start/End: Complemental strand, 12341759 - 12341682
Alignment:
| Q |
20 |
tttgtaccatgtctctaaaagttttgatgataacaaagtattaaa-aataatttaaaatgttaatgtatgtttaagtgt |
97 |
Q |
| |
|
||||||| ||| |||||||| |||||||||||||||||||||||| || |||| || |||||||| ||||||||||||| |
|
|
| T |
12341759 |
tttgtacaatgcctctaaaa-ttttgatgataacaaagtattaaagaaaaattgaatatgttaatatatgtttaagtgt |
12341682 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 67
Target Start/End: Original strand, 2265222 - 2265254
Alignment:
| Q |
35 |
taaaagttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |
|
|
| T |
2265222 |
taaaagttttgatgataacaaagtattaaaaat |
2265254 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 148
Target Start/End: Original strand, 10646486 - 10646588
Alignment:
| Q |
47 |
tgataacaaagtattaaa-aataatttaaaatgttaatgtatgtttaagtgtgcatgaccaaatattaaaatttaccgagctctgaagatatataagagc |
145 |
Q |
| |
|
||||||||||||||| || || |||| | ||||||| |||||| ||||||||| ||||| ||| ||||||||| | || |||||| || ||||||||| |
|
|
| T |
10646486 |
tgataacaaagtattgaataacaattggatatgttaacatatgttcaagtgtgcaggaccatataataaaatttaacaaggtctgaacatgtataagagc |
10646585 |
T |
|
| Q |
146 |
atc |
148 |
Q |
| |
|
||| |
|
|
| T |
10646586 |
atc |
10646588 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 120
Target Start/End: Complemental strand, 8106093 - 8106012
Alignment:
| Q |
40 |
gttttgatgataacaaagtattaaa-aataatttaaaatgttaatgtatgtttaagtgtgcatgaccaaatattaaaattta |
120 |
Q |
| |
|
||||||||||||||||||||||||| ||||||| | ||| |||| ||| || |||||||| ||||| ||||||| ||||| |
|
|
| T |
8106093 |
gttttgatgataacaaagtattaaagaataattagatatgctaatatatcttatagtgtgcaggaccatatattaatattta |
8106012 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 67
Target Start/End: Complemental strand, 5826430 - 5826402
Alignment:
| Q |
39 |
agttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
5826430 |
agttttgatgataacaaagtattaaaaat |
5826402 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 67
Target Start/End: Original strand, 13890657 - 13890685
Alignment:
| Q |
39 |
agttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
13890657 |
agttttgatgataacaaagtattaaaaat |
13890685 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 67
Target Start/End: Complemental strand, 14425886 - 14425858
Alignment:
| Q |
39 |
agttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
14425886 |
agttttgatgataacaaagtattaaaaat |
14425858 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 67
Target Start/End: Original strand, 15700985 - 15701013
Alignment:
| Q |
39 |
agttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
15700985 |
agttttgatgataacaaagtattaaaaat |
15701013 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 67
Target Start/End: Original strand, 19338955 - 19338983
Alignment:
| Q |
39 |
agttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
19338955 |
agttttgatgataacaaagtattaaaaat |
19338983 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 67
Target Start/End: Original strand, 21381146 - 21381174
Alignment:
| Q |
39 |
agttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
21381146 |
agttttgatgataacaaagtattaaaaat |
21381174 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 148
Target Start/End: Complemental strand, 24865845 - 24865733
Alignment:
| Q |
37 |
aaagttttgatgataacaaagtat-taaaaataatttaaaatgttaatgtatgtttaagtgtgcatgaccaaatattaaaatttaccgagctctgaagat |
135 |
Q |
| |
|
|||||||||||||||||||||||| |||||| |||| | ||||| || |||| | |||| |||| || || | ||||||||||| | | |||||| || |
|
|
| T |
24865845 |
aaagttttgatgataacaaagtatataaaaacaattggatatgttgatatatggtcaagtatgcaggatcataaattaaaatttaacaaaatctgaacat |
24865746 |
T |
|
| Q |
136 |
atataagagcatc |
148 |
Q |
| |
|
||||| ||||||| |
|
|
| T |
24865745 |
atatatgagcatc |
24865733 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 67
Target Start/End: Original strand, 32264418 - 32264446
Alignment:
| Q |
39 |
agttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
32264418 |
agttttgatgataacaaagtattaaaaat |
32264446 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0161 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0161
Description:
Target: scaffold0161; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 100
Target Start/End: Complemental strand, 5528 - 5467
Alignment:
| Q |
39 |
agttttgatgataacaaagtattaaaaataatttaaaatgttaatgtatgtttaagtgtgca |
100 |
Q |
| |
|
|||||||||||||||||||||||||||| |||| | |||||||| |||||| ||||||||| |
|
|
| T |
5528 |
agttttgatgataacaaagtattaaaaacaattgcatatgttaatatatgttcaagtgtgca |
5467 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 38; Significance: 0.000000000002; HSPs: 21)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 120
Target Start/End: Complemental strand, 13074179 - 13074090
Alignment:
| Q |
32 |
ctctaaaagttttgatgataacaaagtatta-aaaataatttaaaatgttaatgtatgtttaagtgtgcatgaccaaatattaaaattta |
120 |
Q |
| |
|
|||||||| | |||||||||||||||||||| |||| |||| || ||| |||| ||||||||| ||||||| |||| | ||||||||||| |
|
|
| T |
13074179 |
ctctaaaattgttgatgataacaaagtattaaaaaacaattgaatatgctaatatatgtttaaatgtgcataaccatagattaaaattta |
13074090 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 80 - 147
Target Start/End: Original strand, 17569256 - 17569323
Alignment:
| Q |
80 |
taatgtatgtttaagtgtgcatgaccaaatattaaaatttaccgagctctgaagatatataagagcat |
147 |
Q |
| |
|
|||| |||||||||||||| ||||||| | ||||||||||| | || |||||| |||||||||||||| |
|
|
| T |
17569256 |
taatatatgtttaagtgtgtatgaccatagattaaaatttatcaaggtctgaacatatataagagcat |
17569323 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 42 - 154
Target Start/End: Complemental strand, 23959808 - 23959695
Alignment:
| Q |
42 |
tttgatgataacaaagtattaaa-aataatttaaaatgttaatgtatgtttaagtgtgcatgaccaaatattaaaatttaccgagctctgaagatatata |
140 |
Q |
| |
|
||||||||||||||||||||||| || || || | ||| |||| |||||| ||||||| | ||||| ||||||||||||| | || | |||| || |||| |
|
|
| T |
23959808 |
tttgatgataacaaagtattaaataacaacttgatatgctaatatatgttcaagtgtggaggaccatatattaaaatttaacaaggtatgaacatgtata |
23959709 |
T |
|
| Q |
141 |
agagcatctaaagc |
154 |
Q |
| |
|
||||| ||| |||| |
|
|
| T |
23959708 |
agagcgtctgaagc |
23959695 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 148
Target Start/End: Original strand, 16586595 - 16586703
Alignment:
| Q |
41 |
ttttgatgataacaaagtatt-aaaaataatttaaaatgttaatgtatgtttaagtgtgcatgaccaaatattaaaatttaccgagctctgaagatatat |
139 |
Q |
| |
|
||||||||||||||||||||| ||||| |||| || ||| |||| |||||| || | |||| ||||| | ||||||||||| | || | |||| || ||| |
|
|
| T |
16586595 |
ttttgatgataacaaagtattaaaaaagaattgaatatgctaatatatgttcaaatttgcaggaccataaattaaaatttaacaaggtttgaaaatgtat |
16586694 |
T |
|
| Q |
140 |
aagagcatc |
148 |
Q |
| |
|
||||||||| |
|
|
| T |
16586695 |
aagagcatc |
16586703 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 106
Target Start/End: Original strand, 27765316 - 27765382
Alignment:
| Q |
41 |
ttttgatgataacaaagtattaaa-aataatttaaaatgttaatgtatgtttaagtgtgcatgacca |
106 |
Q |
| |
|
|||||||||||||||||||||||| ||||||| | |||||||| |||||| || |||||| ||||| |
|
|
| T |
27765316 |
ttttgatgataacaaagtattaaagaataattggatatgttaatatatgttcaaatgtgcaggacca |
27765382 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 119
Target Start/End: Original strand, 35665808 - 35665890
Alignment:
| Q |
38 |
aagttttgatgataacaaagtattaaaaat-aatttaaaatgttaatgtatgtttaagtgtgcatgaccaaatattaaaattt |
119 |
Q |
| |
|
|||||||||||||||| || ||||||||| |||| || |||||||| ||||||||||| |||| || || | |||||||||| |
|
|
| T |
35665808 |
aagttttgatgataacgaaatattaaaaaacaattgaatatgttaatatatgtttaagtatgcacgatcatagattaaaattt |
35665890 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 67
Target Start/End: Original strand, 1586678 - 1586706
Alignment:
| Q |
39 |
agttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
1586678 |
agttttgatgataacaaagtattaaaaat |
1586706 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 67
Target Start/End: Complemental strand, 3277453 - 3277425
Alignment:
| Q |
39 |
agttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
3277453 |
agttttgatgataacaaagtattaaaaat |
3277425 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 67
Target Start/End: Original strand, 17966788 - 17966816
Alignment:
| Q |
39 |
agttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
17966788 |
agttttgatgataacaaagtattaaaaat |
17966816 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 67
Target Start/End: Complemental strand, 19115591 - 19115563
Alignment:
| Q |
39 |
agttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
19115591 |
agttttgatgataacaaagtattaaaaat |
19115563 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 67
Target Start/End: Complemental strand, 22755944 - 22755916
Alignment:
| Q |
39 |
agttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
22755944 |
agttttgatgataacaaagtattaaaaat |
22755916 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 67
Target Start/End: Original strand, 22775950 - 22775978
Alignment:
| Q |
39 |
agttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
22775950 |
agttttgatgataacaaagtattaaaaat |
22775978 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 67
Target Start/End: Original strand, 22781328 - 22781356
Alignment:
| Q |
39 |
agttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
22781328 |
agttttgatgataacaaagtattaaaaat |
22781356 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 67
Target Start/End: Original strand, 22785414 - 22785442
Alignment:
| Q |
39 |
agttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
22785414 |
agttttgatgataacaaagtattaaaaat |
22785442 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 67
Target Start/End: Original strand, 31327595 - 31327623
Alignment:
| Q |
39 |
agttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
31327595 |
agttttgatgataacaaagtattaaaaat |
31327623 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 67
Target Start/End: Original strand, 31334316 - 31334344
Alignment:
| Q |
39 |
agttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
31334316 |
agttttgatgataacaaagtattaaaaat |
31334344 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 67
Target Start/End: Original strand, 31967688 - 31967716
Alignment:
| Q |
39 |
agttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
31967688 |
agttttgatgataacaaagtattaaaaat |
31967716 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 67
Target Start/End: Original strand, 34321541 - 34321569
Alignment:
| Q |
39 |
agttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
34321541 |
agttttgatgataacaaagtattaaaaat |
34321569 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 67
Target Start/End: Original strand, 35743726 - 35743754
Alignment:
| Q |
39 |
agttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
35743726 |
agttttgatgataacaaagtattaaaaat |
35743754 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 67
Target Start/End: Complemental strand, 38781845 - 38781813
Alignment:
| Q |
35 |
taaaagttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||| ||||||||||| |
|
|
| T |
38781845 |
taaaagttttgatgataacaaggtattaaaaat |
38781813 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 67
Target Start/End: Complemental strand, 44840886 - 44840858
Alignment:
| Q |
39 |
agttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
44840886 |
agttttgatgataacaaagtattaaaaat |
44840858 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0003 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0003
Description:
Target: scaffold0003; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 11 - 154
Target Start/End: Original strand, 319040 - 319183
Alignment:
| Q |
11 |
aaaatgagttttgtaccatgtctctaaaagttttgatgataacaaagtatt-aaaaataatttaaaatgttaatgtatgtttaagtgtgcatgaccaaat |
109 |
Q |
| |
|
|||||| ||||||||| ||| || |||| |||||||||||||||||||||| ||||| |||| | |||||||| | |||| ||||||||| || || | |
|
|
| T |
319040 |
aaaatgggttttgtacaatgcctttaaa-gttttgatgataacaaagtattgaaaaacaattagatatgttaatatgtgttcaagtgtgcaggatcataa |
319138 |
T |
|
| Q |
110 |
attaaaatttaccgagctctgaagatatataagagcatctaaagc |
154 |
Q |
| |
|
|||||||||| | || ||||| |||||| ||||||||| |||| |
|
|
| T |
319139 |
attaaaatttgctaagttctgaccatatatgagagcatctgaagc |
319183 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 36; Significance: 0.00000000003; HSPs: 10)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 154
Target Start/End: Original strand, 6560510 - 6560636
Alignment:
| Q |
28 |
atgtctctaaaagttttgatgataacaaagt-attaaaaataatttaaaatgttaatgtatgtttaagtgtgcatgaccaaatattaaaatttaccgagc |
126 |
Q |
| |
|
||||||||||| ||||||||||||||||||| || || || ||| || ||| |||| ||||||||||| |||| |||| | |||| |||||| | || |
|
|
| T |
6560510 |
atgtctctaaa-gttttgatgataacaaagtgatgaagaaaaatcgaatatggtaatatatgtttaagtttgcagaaccataaattacaatttatcaagg |
6560608 |
T |
|
| Q |
127 |
tctgaagatatataagagcatctaaagc |
154 |
Q |
| |
|
|||||| ||||||||||||||| ||||| |
|
|
| T |
6560609 |
tctgaacatatataagagcatcaaaagc |
6560636 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 11703760 - 11703845
Alignment:
| Q |
37 |
aaagttttgatgataacaaa-gtattaaa-aataatttaaaatgttaatgtatgtttaagtgtgcatgaccaaatattaaaattta |
120 |
Q |
| |
|
|||||||||||||||||||| |||||| | || |||| ||||| |||| ||||||||||||||||||| || | ||||||||||| |
|
|
| T |
11703760 |
aaagttttgatgataacaaaagtattatagaacaattgtaaatgctaatatatgtttaagtgtgcatgatcatagattaaaattta |
11703845 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 147
Target Start/End: Complemental strand, 4312782 - 4312721
Alignment:
| Q |
86 |
atgtttaagtgtgcatgaccaaatattaaaatttaccgagctctgaagatatataagagcat |
147 |
Q |
| |
|
||||| ||||||||||||||| ||||||||||||| | || | |||| || ||||||||||| |
|
|
| T |
4312782 |
atgttcaagtgtgcatgaccatatattaaaatttaacaagttttgaacatgtataagagcat |
4312721 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 67
Target Start/End: Original strand, 28251171 - 28251200
Alignment:
| Q |
38 |
aagttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
28251171 |
aagttttgatgataacaaagtattaaaaat |
28251200 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 67
Target Start/End: Complemental strand, 16336622 - 16336594
Alignment:
| Q |
39 |
agttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
16336622 |
agttttgatgataacaaagtattaaaaat |
16336594 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 120
Target Start/End: Complemental strand, 17291959 - 17291879
Alignment:
| Q |
41 |
ttttgatgataacaaagtattaaa-aataatttaaaatgttaatgtatgtttaagtgtgcatgaccaaatattaaaattta |
120 |
Q |
| |
|
|||||||||||||||| | ||||| ||||||| || ||| |||| |||||||||||||| | || || | ||||||||||| |
|
|
| T |
17291959 |
ttttgatgataacaaaatcttaaagaataattgaatatgctaatatatgtttaagtgtgtaagatcatagattaaaattta |
17291879 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 67
Target Start/End: Original strand, 17741276 - 17741304
Alignment:
| Q |
39 |
agttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
17741276 |
agttttgatgataacaaagtattaaaaat |
17741304 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 67
Target Start/End: Complemental strand, 19624429 - 19624401
Alignment:
| Q |
39 |
agttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
19624429 |
agttttgatgataacaaagtattaaaaat |
19624401 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 67
Target Start/End: Original strand, 26971892 - 26971920
Alignment:
| Q |
39 |
agttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
26971892 |
agttttgatgataacaaagtattaaaaat |
26971920 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 67
Target Start/End: Complemental strand, 31573017 - 31572989
Alignment:
| Q |
39 |
agttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
31573017 |
agttttgatgataacaaagtattaaaaat |
31572989 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0318 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0318
Description:
Target: scaffold0318; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 67
Target Start/End: Original strand, 20229 - 20258
Alignment:
| Q |
38 |
aagttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
20229 |
aagttttgatgataacaaagtattaaaaat |
20258 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0199 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0199
Description:
Target: scaffold0199; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 67
Target Start/End: Complemental strand, 23203 - 23174
Alignment:
| Q |
38 |
aagttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
23203 |
aagttttgatgataacaaagtattaaaaat |
23174 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1359 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold1359
Description:
Target: scaffold1359; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 67
Target Start/End: Original strand, 1423 - 1451
Alignment:
| Q |
39 |
agttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
1423 |
agttttgatgataacaaagtattaaaaat |
1451 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0473 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0473
Description:
Target: scaffold0473; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 67
Target Start/End: Original strand, 2370 - 2398
Alignment:
| Q |
39 |
agttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
2370 |
agttttgatgataacaaagtattaaaaat |
2398 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0471 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0471
Description:
Target: scaffold0471; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 67
Target Start/End: Complemental strand, 3804 - 3776
Alignment:
| Q |
39 |
agttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
3804 |
agttttgatgataacaaagtattaaaaat |
3776 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0439 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0439
Description:
Target: scaffold0439; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 67
Target Start/End: Original strand, 6352 - 6380
Alignment:
| Q |
39 |
agttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
6352 |
agttttgatgataacaaagtattaaaaat |
6380 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0352 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0352
Description:
Target: scaffold0352; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 67
Target Start/End: Original strand, 471 - 499
Alignment:
| Q |
39 |
agttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
471 |
agttttgatgataacaaagtattaaaaat |
499 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0275 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0275
Description:
Target: scaffold0275; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 67
Target Start/End: Complemental strand, 8742 - 8714
Alignment:
| Q |
39 |
agttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
8742 |
agttttgatgataacaaagtattaaaaat |
8714 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0249 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0249
Description:
Target: scaffold0249; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 67
Target Start/End: Original strand, 17415 - 17443
Alignment:
| Q |
39 |
agttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
17415 |
agttttgatgataacaaagtattaaaaat |
17443 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0217 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0217
Description:
Target: scaffold0217; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 67
Target Start/End: Complemental strand, 10031 - 10003
Alignment:
| Q |
39 |
agttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
10031 |
agttttgatgataacaaagtattaaaaat |
10003 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0069 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0069
Description:
Target: scaffold0069; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 67
Target Start/End: Original strand, 4989 - 5017
Alignment:
| Q |
39 |
agttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
4989 |
agttttgatgataacaaagtattaaaaat |
5017 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0045 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0045
Description:
Target: scaffold0045; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 67
Target Start/End: Original strand, 87244 - 87272
Alignment:
| Q |
39 |
agttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
87244 |
agttttgatgataacaaagtattaaaaat |
87272 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0035 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0035
Description:
Target: scaffold0035; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 67
Target Start/End: Original strand, 98819 - 98847
Alignment:
| Q |
39 |
agttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
98819 |
agttttgatgataacaaagtattaaaaat |
98847 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0022 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0022
Description:
Target: scaffold0022; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 67
Target Start/End: Complemental strand, 159539 - 159511
Alignment:
| Q |
39 |
agttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
159539 |
agttttgatgataacaaagtattaaaaat |
159511 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0015 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0015
Description:
Target: scaffold0015; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 67
Target Start/End: Complemental strand, 61273 - 61245
Alignment:
| Q |
39 |
agttttgatgataacaaagtattaaaaat |
67 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
61273 |
agttttgatgataacaaagtattaaaaat |
61245 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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