View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14906_low_2 (Length: 486)

Name: NF14906_low_2
Description: NF14906
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14906_low_2
NF14906_low_2
[»] chr4 (70 HSPs)
chr4 (25-470)||(23454954-23455396)
chr4 (25-204)||(23455609-23455789)
chr4 (22-201)||(38813551-38813731)
chr4 (25-204)||(56556582-56556762)
chr4 (30-204)||(38982516-38982691)
chr4 (25-204)||(38814247-38814427)
chr4 (25-204)||(52816343-52816523)
chr4 (25-205)||(52815663-52815844)
chr4 (26-204)||(56557245-56557424)
chr4 (20-125)||(53477080-53477185)
chr4 (21-131)||(54591570-54591682)
chr4 (25-125)||(55013089-55013188)
chr4 (28-131)||(54590146-54590249)
chr4 (116-204)||(55867362-55867451)
chr4 (25-100)||(13336863-13336938)
chr4 (147-206)||(27069033-27069092)
chr4 (147-206)||(50503948-50504007)
chr4 (147-207)||(10408012-10408072)
chr4 (147-206)||(22718183-22718242)
chr4 (25-100)||(22882352-22882427)
chr4 (25-100)||(22934016-22934091)
chr4 (147-206)||(27891707-27891766)
chr4 (147-206)||(50504069-50504128)
chr4 (147-206)||(52573351-52573410)
chr4 (147-207)||(40316908-40316968)
chr4 (147-207)||(40326982-40327042)
chr4 (147-207)||(54858683-54858743)
chr4 (146-205)||(147441-147500)
chr4 (147-206)||(9731456-9731515)
chr4 (147-206)||(10408133-10408192)
chr4 (147-206)||(22986974-22987033)
chr4 (147-206)||(27069154-27069213)
chr4 (116-206)||(39538171-39538262)
chr4 (147-206)||(39666899-39666958)
chr4 (147-206)||(45463317-45463376)
chr4 (147-206)||(51859530-51859589)
chr4 (147-206)||(52573472-52573531)
chr4 (22-100)||(22881164-22881242)
chr4 (22-100)||(22932828-22932906)
chr4 (116-204)||(11447977-11448066)
chr4 (25-125)||(20086437-20086537)
chr4 (147-207)||(30641640-30641700)
chr4 (155-207)||(32063581-32063633)
chr4 (147-203)||(39667023-39667079)
chr4 (115-205)||(148002-148093)
chr4 (147-206)||(39701032-39701091)
chr4 (147-206)||(39701153-39701212)
chr4 (147-206)||(45463196-45463255)
chr4 (147-206)||(54858804-54858863)
chr4 (25-95)||(9254406-9254476)
chr4 (25-127)||(33294144-33294246)
chr4 (25-125)||(22250017-22250117)
chr4 (21-125)||(47862148-47862252)
chr4 (25-125)||(47862436-47862535)
chr4 (147-207)||(51859650-51859709)
chr4 (25-125)||(53559671-53559771)
chr4 (101-163)||(41583520-41583583)
chr4 (147-201)||(5818024-5818078)
chr4 (23-81)||(20601082-20601140)
chr4 (26-92)||(22249927-22249993)
chr4 (39-125)||(50245871-50245957)
chr4 (27-125)||(54961715-54961813)
chr4 (165-206)||(11524090-11524131)
chr4 (24-125)||(12691405-12691506)
chr4 (28-125)||(12691689-12691786)
chr4 (24-125)||(37677847-37677948)
chr4 (25-125)||(8287217-8287317)
chr4 (25-125)||(22249733-22249833)
chr4 (25-125)||(33294427-33294527)
chr4 (61-125)||(54961467-54961531)
[»] chr3 (64 HSPs)
chr3 (61-470)||(32716285-32716691)
chr3 (25-207)||(29192910-29193093)
chr3 (25-204)||(32717025-32717205)
chr3 (25-207)||(29192035-29192218)
chr3 (21-204)||(45279204-45279388)
chr3 (25-204)||(48189019-48189199)
chr3 (25-204)||(2944586-2944766)
chr3 (20-204)||(2943908-2944093)
chr3 (21-204)||(11026552-11026736)
chr3 (30-204)||(37249204-37249379)
chr3 (21-204)||(1756546-1756730)
chr3 (30-204)||(45278549-45278724)
chr3 (30-204)||(48188383-48188558)
chr3 (30-204)||(37249718-37249892)
chr3 (25-204)||(1757224-1757404)
chr3 (25-205)||(43105233-43105414)
chr3 (39-204)||(43105754-43105920)
chr3 (48-204)||(11025960-11026117)
chr3 (25-125)||(22736690-22736790)
chr3 (30-125)||(44481953-44482048)
chr3 (30-125)||(44476054-44476149)
chr3 (147-206)||(3596353-3596412)
chr3 (147-206)||(35643974-35644033)
chr3 (147-206)||(40788664-40788723)
chr3 (147-206)||(41422095-41422154)
chr3 (147-206)||(3469323-3469382)
chr3 (147-206)||(47551616-47551675)
chr3 (158-207)||(10294695-10294744)
chr3 (147-207)||(6956372-6956432)
chr3 (147-207)||(13948903-13948963)
chr3 (69-125)||(22735403-22735459)
chr3 (150-206)||(29686067-29686123)
chr3 (147-206)||(3469444-3469503)
chr3 (147-206)||(29118661-29118720)
chr3 (147-206)||(29118782-29118841)
chr3 (147-206)||(32306547-32306606)
chr3 (147-206)||(52032261-52032320)
chr3 (147-206)||(52032383-52032442)
chr3 (147-205)||(37778518-37778576)
chr3 (24-125)||(53037026-53037127)
chr3 (54-127)||(55036698-55036771)
chr3 (25-125)||(1741387-1741487)
chr3 (116-207)||(9368546-9368638)
chr3 (147-207)||(40788543-40788603)
chr3 (48-128)||(46670536-46670616)
chr3 (26-125)||(10998157-10998256)
chr3 (167-206)||(29686185-29686224)
chr3 (147-201)||(11910822-11910876)
chr3 (147-205)||(32306669-32306727)
chr3 (165-207)||(43608727-43608769)
chr3 (147-203)||(3596232-3596288)
chr3 (25-125)||(11312735-11312835)
chr3 (25-125)||(22129006-22129106)
chr3 (147-206)||(10294804-10294862)
chr3 (147-206)||(10307619-10307678)
chr3 (26-92)||(21300327-21300393)
chr3 (26-92)||(22129130-22129196)
chr3 (165-207)||(35759046-35759088)
chr3 (39-125)||(40256888-40256974)
chr3 (115-163)||(9367831-9367880)
chr3 (25-94)||(10749318-10749387)
chr3 (48-125)||(30890491-30890568)
chr3 (28-125)||(55036953-55037050)
chr3 (25-125)||(51279231-51279331)
[»] chr8 (71 HSPs)
chr8 (116-460)||(34176966-34177307)
chr8 (25-204)||(34213764-34213944)
chr8 (20-204)||(34665765-34665950)
chr8 (25-204)||(34214448-34214629)
chr8 (30-204)||(34666461-34666635)
chr8 (20-125)||(1232799-1232902)
chr8 (25-125)||(25288076-25288176)
chr8 (25-125)||(38598964-38599064)
chr8 (26-125)||(1231527-1231626)
chr8 (25-109)||(33497632-33497716)
chr8 (25-125)||(7393145-7393245)
chr8 (24-125)||(4970124-4970225)
chr8 (147-206)||(10445579-10445638)
chr8 (22-125)||(24377178-24377281)
chr8 (147-206)||(25124807-25124866)
chr8 (116-204)||(2534786-2534875)
chr8 (29-106)||(33497020-33497097)
chr8 (147-206)||(15230175-15230234)
chr8 (147-206)||(39474668-39474727)
chr8 (32-109)||(24379012-24379089)
chr8 (101-204)||(11761916-11762020)
chr8 (147-207)||(35634342-35634402)
chr8 (25-96)||(4463455-4463526)
chr8 (147-206)||(6471813-6471872)
chr8 (25-102)||(29574742-29574819)
chr8 (116-207)||(2535795-2535887)
chr8 (147-203)||(21432816-21432872)
chr8 (147-206)||(21432937-21432996)
chr8 (147-206)||(42945237-42945296)
chr8 (147-206)||(42945358-42945417)
chr8 (147-206)||(44664631-44664690)
chr8 (67-125)||(7392250-7392308)
chr8 (23-105)||(27436561-27436643)
chr8 (147-207)||(15230054-15230114)
chr8 (21-125)||(23424508-23424612)
chr8 (25-125)||(25287792-25287892)
chr8 (147-203)||(41353820-41353876)
chr8 (147-206)||(27500211-27500270)
chr8 (23-105)||(27437539-27437621)
chr8 (27-125)||(41801818-41801916)
chr8 (147-196)||(8997943-8997992)
chr8 (25-98)||(36574817-36574890)
chr8 (27-127)||(31690178-31690277)
chr8 (21-97)||(36576029-36576105)
chr8 (25-125)||(36623637-36623737)
chr8 (22-94)||(38600265-38600337)
chr8 (25-125)||(40422444-40422544)
chr8 (25-125)||(43866711-43866811)
chr8 (26-81)||(7587-7642)
chr8 (147-202)||(7983551-7983606)
chr8 (54-125)||(9632357-9632428)
chr8 (147-202)||(25124686-25124741)
chr8 (147-206)||(27500332-27500391)
chr8 (54-125)||(37343066-37343137)
chr8 (147-206)||(37542347-37542406)
chr8 (147-206)||(38003578-38003637)
chr8 (147-206)||(44664752-44664811)
chr8 (30-100)||(29575910-29575980)
chr8 (26-92)||(37342976-37343042)
chr8 (26-92)||(40525631-40525697)
chr8 (26-92)||(43866835-43866901)
chr8 (24-125)||(547430-547530)
chr8 (24-125)||(23424796-23424897)
chr8 (147-204)||(34176564-34176621)
chr8 (39-92)||(36623560-36623613)
chr8 (48-125)||(40525791-40525868)
chr8 (25-125)||(7677-7777)
chr8 (25-125)||(11478145-11478245)
chr8 (25-125)||(36623352-36623452)
chr8 (25-125)||(41182180-41182280)
chr8 (21-125)||(43866995-43867099)
[»] chr5 (48 HSPs)
chr5 (25-207)||(22870379-22870562)
chr5 (32-207)||(22869612-22869788)
chr5 (25-204)||(20856932-20857113)
chr5 (25-204)||(20857466-20857647)
chr5 (25-204)||(20072789-20072969)
chr5 (21-204)||(39181716-39181900)
chr5 (25-204)||(39181057-39181237)
chr5 (30-204)||(36477296-36477471)
chr5 (23-204)||(20072119-20072301)
chr5 (30-204)||(36476770-36476945)
chr5 (24-204)||(16533545-16533726)
chr5 (30-204)||(16532898-16533073)
chr5 (25-131)||(14744724-14744830)
chr5 (25-109)||(8654107-8654191)
chr5 (25-109)||(31107931-31108015)
chr5 (30-125)||(21978017-21978112)
chr5 (25-125)||(21978971-21979071)
chr5 (21-125)||(21972086-21972189)
chr5 (147-206)||(20153162-20153221)
chr5 (63-125)||(39402148-39402210)
chr5 (25-125)||(37944994-37945094)
chr5 (26-125)||(25253087-25253186)
chr5 (26-125)||(25316877-25316976)
chr5 (28-131)||(31108332-31108434)
chr5 (116-207)||(11741762-11741854)
chr5 (25-125)||(14745448-14745548)
chr5 (25-125)||(32052224-32052324)
chr5 (25-125)||(32052508-32052608)
chr5 (147-206)||(17544171-17544230)
chr5 (147-206)||(17544292-17544351)
chr5 (147-206)||(20153041-20153100)
chr5 (147-206)||(22298665-22298724)
chr5 (147-206)||(33871462-33871521)
chr5 (147-198)||(33871590-33871641)
chr5 (25-106)||(8673777-8673858)
chr5 (25-125)||(33735597-33735697)
chr5 (54-125)||(21260894-21260965)
chr5 (23-92)||(18934837-18934906)
chr5 (147-203)||(21287904-21287960)
chr5 (25-125)||(25253370-25253470)
chr5 (25-125)||(25317161-25317261)
chr5 (25-125)||(33735313-33735413)
chr5 (28-71)||(39402736-39402779)
chr5 (39-125)||(8323070-8323156)
chr5 (24-125)||(12991072-12991173)
chr5 (24-125)||(13064693-13064794)
chr5 (48-125)||(18934998-18935074)
chr5 (166-206)||(30005283-30005323)
[»] chr2 (48 HSPs)
chr2 (20-207)||(25624350-25624538)
chr2 (24-207)||(25623287-25623471)
chr2 (21-204)||(20983181-20983365)
chr2 (25-204)||(29957817-29957997)
chr2 (22-204)||(29958467-29958650)
chr2 (25-204)||(20982524-20982704)
chr2 (25-125)||(24387351-24387451)
chr2 (25-109)||(20101770-20101854)
chr2 (25-126)||(24388255-24388356)
chr2 (27-204)||(21103088-21103261)
chr2 (25-106)||(20103163-20103244)
chr2 (32-131)||(19620787-19620886)
chr2 (149-206)||(11830489-11830546)
chr2 (116-207)||(6588774-6588866)
chr2 (150-206)||(8710712-8710768)
chr2 (25-125)||(16366963-16367063)
chr2 (30-122)||(33881580-33881672)
chr2 (147-206)||(15604583-15604642)
chr2 (147-206)||(41588302-41588361)
chr2 (147-204)||(39936495-39936552)
chr2 (25-128)||(17366626-17366729)
chr2 (24-125)||(10446831-10446932)
chr2 (25-98)||(43236504-43236577)
chr2 (25-125)||(1149937-1150037)
chr2 (25-125)||(9694026-9694126)
chr2 (147-207)||(15604462-15604522)
chr2 (25-125)||(20911130-20911230)
chr2 (25-125)||(32519155-32519255)
chr2 (147-203)||(41587357-41587413)
chr2 (147-206)||(8342310-8342369)
chr2 (165-207)||(8710609-8710651)
chr2 (25-125)||(1150221-1150321)
chr2 (25-125)||(37985011-37985111)
chr2 (54-125)||(16367247-16367318)
chr2 (22-61)||(21370594-21370633)
chr2 (117-207)||(25230194-25230285)
chr2 (30-105)||(33882892-33882967)
chr2 (83-125)||(19619584-19619626)
chr2 (29-98)||(7981051-7981120)
chr2 (25-98)||(7983837-7983910)
chr2 (83-128)||(13646138-13646183)
chr2 (83-128)||(13652090-13652135)
chr2 (28-125)||(18476910-18477007)
chr2 (25-98)||(43237747-43237820)
chr2 (116-203)||(202605-202693)
chr2 (88-163)||(10840539-10840615)
chr2 (24-92)||(20911446-20911514)
chr2 (25-125)||(32519439-32519539)
[»] chr1 (66 HSPs)
chr1 (25-207)||(13295135-13295318)
chr1 (24-204)||(46282070-46282251)
chr1 (25-204)||(49093041-49093221)
chr1 (30-204)||(46282713-46282888)
chr1 (30-204)||(50062868-50063043)
chr1 (63-204)||(49093733-49093875)
chr1 (28-160)||(25065922-25066055)
chr1 (68-204)||(50062246-50062383)
chr1 (28-163)||(25064936-25065072)
chr1 (21-109)||(51935215-51935303)
chr1 (30-125)||(32619389-32619484)
chr1 (30-112)||(32622369-32622451)
chr1 (25-131)||(2828193-2828299)
chr1 (25-97)||(13295608-13295680)
chr1 (25-128)||(6345634-6345737)
chr1 (26-131)||(2829533-2829645)
chr1 (30-125)||(6344260-6344355)
chr1 (147-206)||(28324927-28324986)
chr1 (116-219)||(5734100-5734204)
chr1 (25-113)||(32238699-32238787)
chr1 (147-206)||(7371413-7371472)
chr1 (147-206)||(31058301-31058360)
chr1 (147-206)||(40714567-40714626)
chr1 (25-125)||(1047488-1047588)
chr1 (22-125)||(2953748-2953851)
chr1 (147-206)||(8898640-8898699)
chr1 (147-206)||(49955470-49955529)
chr1 (149-207)||(35038580-35038638)
chr1 (147-201)||(45750091-45750145)
chr1 (126-207)||(32132406-32132487)
chr1 (25-122)||(52563651-52563748)
chr1 (147-206)||(8898761-8898820)
chr1 (54-125)||(10019657-10019728)
chr1 (147-206)||(17189077-17189136)
chr1 (25-131)||(28534790-28534896)
chr1 (147-206)||(35040858-35040917)
chr1 (22-125)||(46849942-46850045)
chr1 (147-206)||(49955591-49955650)
chr1 (147-201)||(30326619-30326673)
chr1 (43-125)||(46545015-46545097)
chr1 (24-125)||(2953463-2953564)
chr1 (25-125)||(19755689-19755789)
chr1 (147-203)||(20760752-20760808)
chr1 (54-125)||(5926548-5926619)
chr1 (54-125)||(29980922-29980993)
chr1 (147-206)||(40714688-40714746)
chr1 (147-206)||(45749965-45750024)
chr1 (28-125)||(49002879-49002976)
chr1 (21-125)||(5183790-5183894)
chr1 (25-125)||(48380681-48380781)
chr1 (147-206)||(12905903-12905962)
chr1 (147-206)||(28325048-28325107)
chr1 (115-205)||(46899151-46899242)
chr1 (26-92)||(29042879-29042945)
chr1 (23-125)||(29043039-29043141)
chr1 (147-201)||(37929541-37929595)
chr1 (54-127)||(24701299-24701372)
chr1 (28-125)||(29980642-29980739)
chr1 (25-125)||(1040298-1040398)
chr1 (25-125)||(1047204-1047304)
chr1 (116-163)||(4960631-4960679)
chr1 (25-125)||(6056376-6056476)
chr1 (116-163)||(17662139-17662187)
chr1 (25-105)||(24701573-24701653)
chr1 (25-125)||(25414844-25414944)
chr1 (25-125)||(49003159-49003259)
[»] chr7 (67 HSPs)
chr7 (25-219)||(12643100-12643295)
chr7 (25-207)||(4226125-4226308)
chr7 (25-207)||(45914526-45914707)
chr7 (25-207)||(47558030-47558213)
chr7 (26-207)||(12644050-12644232)
chr7 (25-203)||(4227093-4227272)
chr7 (25-163)||(45915769-45915908)
chr7 (25-204)||(27479987-27480167)
chr7 (30-204)||(22661362-22661537)
chr7 (25-204)||(27480667-27480847)
chr7 (25-163)||(38643550-38643689)
chr7 (20-125)||(12930767-12930872)
chr7 (25-109)||(37284109-37284193)
chr7 (23-156)||(38644628-38644762)
chr7 (20-125)||(12929282-12929387)
chr7 (25-125)||(7158231-7158331)
chr7 (25-109)||(37289326-37289410)
chr7 (116-204)||(43124400-43124489)
chr7 (83-207)||(47558984-47559106)
chr7 (101-207)||(32688463-32688570)
chr7 (115-207)||(18087583-18087676)
chr7 (126-206)||(18086391-18086471)
chr7 (25-125)||(43937894-43937994)
chr7 (147-206)||(25628601-25628660)
chr7 (116-206)||(25453372-25453463)
chr7 (147-206)||(28890702-28890761)
chr7 (147-206)||(32934592-32934651)
chr7 (25-102)||(31695637-31695714)
chr7 (25-125)||(26825630-26825730)
chr7 (25-121)||(37563642-37563738)
chr7 (147-206)||(10600193-10600252)
chr7 (147-206)||(32068340-32068399)
chr7 (116-206)||(33808414-33808505)
chr7 (147-206)||(42618034-42618093)
chr7 (147-206)||(42618155-42618214)
chr7 (147-205)||(23058674-23058732)
chr7 (116-204)||(18855902-18855991)
chr7 (24-125)||(40021490-40021591)
chr7 (147-207)||(5455950-5456010)
chr7 (147-207)||(13384625-13384685)
chr7 (25-125)||(40022529-40022628)
chr7 (147-206)||(22081682-22081741)
chr7 (147-206)||(25628722-25628781)
chr7 (147-206)||(27138185-27138244)
chr7 (147-206)||(32068219-32068278)
chr7 (101-207)||(32687473-32687580)
chr7 (147-206)||(32934471-32934530)
chr7 (147-206)||(46205553-46205612)
chr7 (25-131)||(7159207-7159312)
chr7 (147-207)||(12228508-12228568)
chr7 (147-203)||(25453251-25453307)
chr7 (25-125)||(43938178-43938278)
chr7 (147-206)||(43266389-43266448)
chr7 (147-202)||(43266514-43266569)
chr7 (165-207)||(23058570-23058612)
chr7 (26-92)||(26825824-26825890)
chr7 (30-100)||(31694476-31694546)
chr7 (23-81)||(47121412-47121470)
chr7 (116-199)||(39274961-39275045)
chr7 (21-125)||(25049445-25049549)
chr7 (84-132)||(26830018-26830066)
chr7 (25-125)||(27558136-27558236)
chr7 (25-125)||(34454764-34454864)
chr7 (25-125)||(37563354-37563454)
chr7 (84-128)||(47738994-47739038)
chr7 (147-207)||(47945471-47945531)
chr7 (147-207)||(47950901-47950961)
[»] chr6 (45 HSPs)
chr6 (25-204)||(4117467-4117647)
chr6 (21-204)||(33399962-33400146)
chr6 (25-204)||(4116799-4116979)
chr6 (25-204)||(14656480-14656660)
chr6 (25-204)||(33401045-33401226)
chr6 (25-204)||(14657129-14657309)
chr6 (28-204)||(1661350-1661527)
chr6 (25-125)||(17784385-17784485)
chr6 (31-109)||(8427381-8427459)
chr6 (147-206)||(22503018-22503077)
chr6 (25-125)||(5064335-5064435)
chr6 (23-131)||(8427198-8427306)
chr6 (147-206)||(7905487-7905546)
chr6 (147-206)||(21836153-21836212)
chr6 (147-206)||(31407122-31407181)
chr6 (147-206)||(15913792-15913851)
chr6 (147-206)||(31407001-31407060)
chr6 (116-207)||(8089534-8089626)
chr6 (25-125)||(13480492-13480592)
chr6 (21-125)||(23292028-23292132)
chr6 (147-206)||(7160927-7160986)
chr6 (147-206)||(12065343-12065402)
chr6 (147-206)||(15913671-15913730)
chr6 (147-205)||(20651133-20651191)
chr6 (116-200)||(20651899-20651984)
chr6 (25-125)||(13480208-13480308)
chr6 (25-125)||(30234876-30234976)
chr6 (54-125)||(5064619-5064690)
chr6 (147-206)||(21836274-21836333)
chr6 (26-125)||(23291745-23291844)
chr6 (59-125)||(20994975-20995041)
chr6 (25-125)||(32337851-32337950)
chr6 (26-125)||(3299843-3299942)
chr6 (147-206)||(6517625-6517684)
chr6 (147-206)||(7905366-7905425)
chr6 (147-206)||(10781402-10781461)
chr6 (147-206)||(22502897-22502956)
chr6 (23-125)||(737981-738083)
chr6 (21-127)||(20994815-20994920)
chr6 (147-204)||(139916-139972)
chr6 (147-204)||(147937-147993)
chr6 (25-94)||(15819805-15819874)
chr6 (24-125)||(21880363-21880464)
chr6 (21-125)||(1066423-1066526)
chr6 (61-125)||(32337600-32337664)
[»] scaffold0347 (2 HSPs)
scaffold0347 (23-163)||(13607-13748)
scaffold0347 (27-160)||(14557-14691)
[»] scaffold0009 (2 HSPs)
scaffold0009 (25-131)||(262435-262541)
scaffold0009 (20-131)||(260996-261107)
[»] scaffold1493 (2 HSPs)
scaffold1493 (25-125)||(593-693)
scaffold1493 (25-125)||(877-977)
[»] scaffold0018 (1 HSPs)
scaffold0018 (24-125)||(73108-73209)
[»] scaffold0182 (2 HSPs)
scaffold0182 (25-109)||(14393-14477)
scaffold0182 (25-109)||(13134-13218)
[»] scaffold0775 (2 HSPs)
scaffold0775 (115-204)||(5052-5142)
scaffold0775 (116-203)||(6227-6315)
[»] scaffold0328 (2 HSPs)
scaffold0328 (147-206)||(11384-11443)
scaffold0328 (147-206)||(11263-11322)
[»] scaffold0388 (2 HSPs)
scaffold0388 (147-203)||(12486-12542)
scaffold0388 (149-206)||(12364-12421)
[»] scaffold0006 (2 HSPs)
scaffold0006 (147-207)||(221912-221972)
scaffold0006 (147-206)||(222033-222092)
[»] scaffold0771 (1 HSPs)
scaffold0771 (147-207)||(1043-1103)
[»] scaffold0042 (1 HSPs)
scaffold0042 (147-201)||(12029-12083)
[»] scaffold0206 (1 HSPs)
scaffold0206 (25-125)||(10325-10425)
[»] scaffold0128 (1 HSPs)
scaffold0128 (146-202)||(19979-20035)
[»] scaffold0599 (1 HSPs)
scaffold0599 (147-201)||(2516-2570)
[»] scaffold0233 (2 HSPs)
scaffold0233 (54-125)||(8462-8533)
scaffold0233 (25-125)||(8716-8816)
[»] scaffold0202 (1 HSPs)
scaffold0202 (48-127)||(14516-14595)
[»] scaffold0279 (1 HSPs)
scaffold0279 (25-125)||(10853-10953)


Alignment Details
Target: chr4 (Bit Score: 337; Significance: 0; HSPs: 70)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 337; E-Value: 0
Query Start/End: Original strand, 25 - 470
Target Start/End: Original strand, 23454954 - 23455396
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    |||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||  ||||    
T  23454954 ggcttaaatatgcatttcatccctgtaattataggccatttgatttttcatccctgagcttactaatcatcccattttgcccctgtaaaaattacccatt 23455053  T
Q  125 taaatttc-gtcccttttcccgattaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctcaaattaatcttcttcac 223  Q
    |||| ||| |||||| |||| ||||||||||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  23455054 taaaattccgtccctcttcctgattaatcactgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaataccctcaaattaatcttcttcac 23455153  T
Q  224 tccttcaagcttcccttgagaaacctgattcattttttcttctctgagaaatcatcaatctccctgcttcattctttttcttcaagtttccaaacagaag 323  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  23455154 tccttcaagcttcccttgagaaacctgattcattttttcttcaatgagaaatcatcaatctccctgcttcattctttttcttcaagtttccaaacagaac 23455253  T
Q  324 aaagtgaaccaataaagcgatagtgaaaaaagaaagtgaaccaataaaggagaaggaagatgaaacctcaatccagacggaattggtagtgcacgtggtg 423  Q
    | | ||   |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23455254 aca-tg---caataaagcgatagtgaaaaaagaaaatgaaccaataaaggagaaggaagatgaaacctcaatccagacggaattggtagtgcacgtggtg 23455349  T
Q  424 gatgctggaggaaggagctgcttgcggcggtgctctgatcaaatatg 470  Q
    | || ||||||||||||||||| | ||||||||||||||||||||||    
T  23455350 gttgttggaggaaggagctgctcgtggcggtgctctgatcaaatatg 23455396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 25 - 204
Target Start/End: Complemental strand, 23455789 - 23455609
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  23455789 ggcttaaatatgcatttcatccctgtaattataggtcatttgatttttcattcctgagcttactaatcctcccattttgccactgtaaaaattaatcatt 23455690  T
Q  125 t-aaatttcgtcccttttcccgattaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccc 204  Q
    | ||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  23455689 tcaaatttcgtccctcttcccgattaatcactgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 23455609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 22 - 201
Target Start/End: Original strand, 38813551 - 38813731
Alignment:
Q  22 tttggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatc 121  Q
    |||||||||||||||| |||||||| |||||||||||| | ||||||||||||||||||| |||||||||||| |||||||||||||||||  | ||||     
T  38813551 tttggcttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaata 38813650  T
Q  122 attt-aaatttcgtcccttttcccgattaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaata 201  Q
    |||| ||| ||||||||| ||||||  |||||||||||||||| |||||||||||||||||||||| ||| ||||||||||    
T  38813651 atttgaaagttcgtccctcttcccggataatcactgccacgtcttcaaattagcaaaatgacatgggaattgacaaaaata 38813731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 25 - 204
Target Start/End: Original strand, 56556582 - 56556762
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    ||||||||||||| |||||||| |||||||||||| | ||||||||||||||| ||| |||||||||||| |||||||||||||||||  | ||||||||    
T  56556582 ggcttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccatgaacttactaatccttccattttgcccctgtaattactaatcatt 56556681  T
Q  125 t-aaatttcgtcccttttcccgattaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccc 204  Q
    | ||| ||||||||| ||||||  |||||||||||||||| |||||||||||||||| ||||| ||| |||||||||||||    
T  56556682 tgaaagttcgtccctcttcccggataatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaataccc 56556762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 30 - 204
Target Start/End: Complemental strand, 38982691 - 38982516
Alignment:
Q  30 aaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcattt-aaa 128  Q
    |||||||| |||||||| || ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||| |||    
T  38982691 aaatatgcttttcatccctgcaattataggccgtttgatttttcatccctgagcttactaatcctcccattttgcccctgtaattactaatcatttgaaa 38982592  T
Q  129 tttcgtcccttttcccgattaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccc 204  Q
     ||||||||| | ||||  |||||||||||||||| |||||||||||||||| ||||| ||| |||||||||||||    
T  38982591 gttcgtccctctccccggataatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaataccc 38982516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 25 - 204
Target Start/End: Complemental strand, 38814427 - 38814247
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    ||||||||||||| |||||||| ||||||| |||| | ||||||||||||||||||| |||||||||||| |||||||||||||||||  | ||||||||    
T  38814427 ggcttaaatatgcttttcatccttgtaattttaggccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcatt 38814328  T
Q  125 t-aaatttcgtcccttttcccgattaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccc 204  Q
    | ||| ||||||||| ||||||  |||||||||||||||| |||||||||||||||||||||   || |||||||||||||    
T  38814327 tgaaagttcgtccctcttcccggataatcactgccacgtcatcaaattagcaaaatgacatgagcattgacaaaaataccc 38814247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 25 - 204
Target Start/End: Complemental strand, 52816523 - 52816343
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    ||||||||||||  |||||||| |||||||||||| | |||||||||||||| |||| |||||||||||| |||||||||||||||||  | ||||||||    
T  52816523 ggcttaaatatgattttcatccctgtaattataggccgtttgatttttcatctctgaacttactaatccttccattttgcccctgtaattactaatcatt 52816424  T
Q  125 t-aaatttcgtcccttttcccgattaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccc 204  Q
    | ||| ||||||||| ||||||  |||||||||||||||| |||||||||||||||| ||||| ||| |||||||||||||    
T  52816423 tgaaagttcgtccctcttcccggataatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaataccc 52816343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 25 - 205
Target Start/End: Original strand, 52815663 - 52815844
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatca-t 123  Q
    ||||||||||||| |||||||| |||||||||||| | |||||||||| |||||||| ||||||||||||  ||||||||||||||||  | |||||| |    
T  52815663 ggcttaaatatgcttttcatccctgtaattataggccgtttgattttttatccctgaacttactaatcctttcattttgcccctgtaattactaatcact 52815762  T
Q  124 ttaaatttcgtcccttttcccgattaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccct 205  Q
    | ||| ||||||||| ||||||  |||||||||||||||| |||||||||||||||| ||||| ||| ||||||||||||||    
T  52815763 tgaaagttcgtccctcttcccggataatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaataccct 52815844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 26 - 204
Target Start/End: Complemental strand, 56557424 - 56557245
Alignment:
Q  26 gcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcattt 125  Q
    |||||||||||| |||||||| | |||||||||| | ||||||||||||||| ||| |||||||||||| |||||||||||||||||  | |||||||||    
T  56557424 gcttaaatatgcttttcatccctctaattataggccgtttgatttttcatccatgaacttactaatccttccattttgcccctgtaattactaatcattt 56557325  T
Q  126 -aaatttcgtcccttttcccgattaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccc 204  Q
     ||| ||||||||| ||||||  |||||||||||||||| |||||||||||||||| ||| | ||| |||||||||||||    
T  56557324 gaaagttcgtccctcttcccggataatcactgccacgtcatcaaattagcaaaatggcataggaattgacaaaaataccc 56557245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 20 - 125
Target Start/End: Complemental strand, 53477185 - 53477080
Alignment:
Q  20 attttggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaa 119  Q
    |||| |||||||||||||||||||||  || |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| ||| |||||    
T  53477185 atttaggcttaaatatgcatttcatctctgcaattataggtcatttgatttttcatctctgaacttactaatcctcccattttgcccctgcaaatattaa 53477086  T
Q  120 tcattt 125  Q
    ||||||    
T  53477085 tcattt 53477080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 21 - 131
Target Start/End: Complemental strand, 54591682 - 54591570
Alignment:
Q  21 ttttggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaa--atta 118  Q
    |||||||||||||||||||||||||| || |||||||| |||||||||||||||||||||| |||||||| |||||||||||||||||| ||||  ||||    
T  54591682 ttttggcttaaatatgcatttcatccctgcaattatagatcatttgatttttcatccctgaacttactaaacctcccattttgcccctgcaaaaatatta 54591583  T
Q  119 atcatttaaattt 131  Q
    ||||||| |||||    
T  54591582 atcatttgaattt 54591570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 25 - 125
Target Start/End: Complemental strand, 55013188 - 55013089
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    ||||||||||||| |||||||||||||||||||||  |||||||||||||| |||||||||||||||||||||| |||||||||||||  | ||||||||    
T  55013188 ggcttaaatatgcttttcatccatgtaattataggctatttgatttttcat-cctgagcttactaatcctcccagtttgcccctgtaattactaatcatt 55013090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 28 - 131
Target Start/End: Original strand, 54590146 - 54590249
Alignment:
Q  28 ttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatttaa 127  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||  ||| ||||||||| || |||||||||| ||  ||| ||||||||||| |    
T  54590146 ttaaatatgcatttcatccctgcaattataggtcatttgatttttcatctttgaacttactaattcttccattttgcctctacaaatattaatcatttga 54590245  T
Q  128 attt 131  Q
    ||||    
T  54590246 attt 54590249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 116 - 204
Target Start/End: Complemental strand, 55867451 - 55867362
Alignment:
Q  116 ttaatcatttaaa-tttcgtcccttttcccgattaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccc 204  Q
    ||||||||||||| |||||||||| |||||  ||||||||||||||||| |||||||||||||||||||| | ||| |||||||||||||    
T  55867451 ttaatcatttaaaatttcgtccctattcccagttaatcactgccacgtcatcaaattagcaaaatgacattggaattgacaaaaataccc 55867362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 13336938 - 13336863
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccatt 100  Q
    |||||||||||||||||||||| || || ||||||||||||||  |||||||||||| ||||||||||||||||||    
T  13336938 ggcttaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccctgaacttactaatcctcccatt 13336863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 27069033 - 27069092
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    ||||||||||||||||| |||||||||||||||| ||||| |||||||||||||||||||    
T  27069033 ttaatcactgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 27069092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 50503948 - 50504007
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    ||||||||||||||||| |||||||||||||||| ||||| |||||||||||||||||||    
T  50503948 ttaatcactgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 50504007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 147 - 207
Target Start/End: Original strand, 10408012 - 10408072
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctca 207  Q
    ||||||||| ||| ||| |||||||||||||||| ||||||||||||||||||||||||||    
T  10408012 ttaatcactaccaagtcatcaaattagcaaaatggcatggaaatggacaaaaataccctca 10408072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 22718242 - 22718183
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    |||||||| | |||||| |||||||||||||||||||||| |||||||||||||||||||    
T  22718242 ttaatcaccgacacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccctc 22718183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 22882427 - 22882352
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccatt 100  Q
    |||| ||||||||||||||||| || || ||||||||||||||  |||||||||||| |||| |||||||||||||    
T  22882427 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccctgaacttaataatcctcccatt 22882352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 22934091 - 22934016
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccatt 100  Q
    |||| ||||||||||||||||| || || ||||||||||||||  |||||||||||| |||| |||||||||||||    
T  22934091 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccctgaacttaataatcctcccatt 22934016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 27891707 - 27891766
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    |||||||||| |||||| |||||||||||||||||||||| |||||||||||||| ||||    
T  27891707 ttaatcactgtcacgtcatcaaattagcaaaatgacatgggaatggacaaaaatatcctc 27891766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 50504128 - 50504069
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    ||||||||| ||| ||| |||||||||||||||||||||| |||||||||||||||||||    
T  50504128 ttaatcactcccaagtcatcaaattagcaaaatgacatgggaatggacaaaaataccctc 50504069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 52573351 - 52573410
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    ||||||||||||||||| |||||||||||||||| ||||  |||||||||||||||||||    
T  52573351 ttaatcactgccacgtcatcaaattagcaaaatggcatgagaatggacaaaaataccctc 52573410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 147 - 207
Target Start/End: Complemental strand, 40316968 - 40316908
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctca 207  Q
    ||||| ||| |||| || |||||||||||||||||||||| ||||||||||||||||||||    
T  40316968 ttaattactaccacatcatcaaattagcaaaatgacatgggaatggacaaaaataccctca 40316908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 147 - 207
Target Start/End: Complemental strand, 40327042 - 40326982
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctca 207  Q
    ||||| ||| |||| || |||||||||||||||||||||| ||||||||||||||||||||    
T  40327042 ttaattactaccacatcatcaaattagcaaaatgacatgggaatggacaaaaataccctca 40326982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 147 - 207
Target Start/End: Original strand, 54858683 - 54858743
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctca 207  Q
    ||||||||||||||||| |||||||||||||||| ||||| ||  ||||||||||||||||    
T  54858683 ttaatcactgccacgtcatcaaattagcaaaatggcatgggaacagacaaaaataccctca 54858743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 146 - 205
Target Start/End: Original strand, 147441 - 147500
Alignment:
Q  146 attaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccct 205  Q
    |||||| ||||||||||| |||||||||||||||| ||||| ||||||||||||| ||||    
T  147441 attaattactgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaatgccct 147500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 9731515 - 9731456
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    ||||||||||||||||| |||||||||||||||| ||||| |||| ||||||||| ||||    
T  9731515 ttaatcactgccacgtcatcaaattagcaaaatggcatgggaatgaacaaaaatatcctc 9731456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 10408192 - 10408133
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    |||||||||||||| || ||||||||||||||||| |||  |||||||||||||||||||    
T  10408192 ttaatcactgccacatcatcaaattagcaaaatgatatgagaatggacaaaaataccctc 10408133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 22986974 - 22987033
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    |||||||| | |||||| |||||||||||||||||||||| ||| |||||||||||||||    
T  22986974 ttaatcaccgacacgtcatcaaattagcaaaatgacatgggaatagacaaaaataccctc 22987033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 27069213 - 27069154
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    |||||||| |||| ||| |||||||||||||||| ||||| |||||||||||||||||||    
T  27069213 ttaatcaccgccaagtcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 27069154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 116 - 206
Target Start/End: Original strand, 39538171 - 39538262
Alignment:
Q  116 ttaatcatttaaa-tttcgtcccttttcccgattaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    ||||||||||||| |||||||||||   |  ||||||| ||| |||||| ||||||||||||||||||||| || || ||||||||||||||    
T  39538171 ttaatcatttaaaatttcgtcccttaatctaattaatcgctgtcacgtcatcaaattagcaaaatgacatgtaattgaacaaaaataccctc 39538262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 39666899 - 39666958
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    ||||||||| ||| ||| |||||||||||||||| ||||| |||||||||||||||||||    
T  39666899 ttaatcactaccaagtcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 39666958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 45463376 - 45463317
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    ||||||||| ||||||| |||||||||||||||| ||||| |||||||||||| ||||||    
T  45463376 ttaatcactaccacgtcatcaaattagcaaaatggcatgggaatggacaaaaacaccctc 45463317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 51859530 - 51859589
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    |||||||||||||| || |||||||||||||||| ||||  |||||||||||||||||||    
T  51859530 ttaatcactgccacatcatcaaattagcaaaatggcatgagaatggacaaaaataccctc 51859589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 52573531 - 52573472
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    ||||||||||||||||| |||||||||||| ||| ||||  |||||||||||||||||||    
T  52573531 ttaatcactgccacgtcatcaaattagcaatatggcatgagaatggacaaaaataccctc 52573472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 22 - 100
Target Start/End: Original strand, 22881164 - 22881242
Alignment:
Q  22 tttggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccatt 100  Q
    ||||||| ||||||||||||||||| ||||| |||||| |||||||  ||||||| |||   |||||||||||||||||    
T  22881164 tttggctaaaatatgcatttcatccctgtaaatataggccatttgaaatttcatctctgcatttactaatcctcccatt 22881242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 22 - 100
Target Start/End: Original strand, 22932828 - 22932906
Alignment:
Q  22 tttggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccatt 100  Q
    ||||||| ||||||||||||||||| ||||| |||||| |||||||  ||||||| |||   |||||||||||||||||    
T  22932828 tttggctaaaatatgcatttcatccctgtaaatataggccatttgaaatttcatctctgcatttactaatcctcccatt 22932906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 116 - 204
Target Start/End: Complemental strand, 11448066 - 11447977
Alignment:
Q  116 ttaatcatttaaa-tttcgtcccttttcccgattaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccc 204  Q
    ||||||||||||| ||||||| || || ||  |||||||||||||| || |||||||| ||||||| |||| |||| |||||||||||||    
T  11448066 ttaatcatttaaaatttcgtcactatttccagttaatcactgccacatcatcaaattaacaaaatggcatgaaaattgacaaaaataccc 11447977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 25 - 125
Target Start/End: Original strand, 20086437 - 20086537
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    ||||||||||||  |||| ||  | ||| |||||||||||||| ||||| |||||||  ||||||||||| ||| | |||||||| ||| ||||||||||    
T  20086437 ggcttaaatatgtctttcgtctctataaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcatt 20086536  T
Q  125 t 125  Q
    |    
T  20086537 t 20086537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 147 - 207
Target Start/End: Original strand, 30641640 - 30641700
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctca 207  Q
    ||||| |||| |||||| |||||||||||||||| ||||| ||||||||||| ||||||||    
T  30641640 ttaattactgtcacgtcatcaaattagcaaaatgtcatgggaatggacaaaattaccctca 30641700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 155 - 207
Target Start/End: Complemental strand, 32063633 - 32063581
Alignment:
Q  155 tgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctca 207  Q
    ||||||||| |||||||||||||||| ||||  ||||||||||||||||||||    
T  32063633 tgccacgtcatcaaattagcaaaatggcatgagaatggacaaaaataccctca 32063581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 39667079 - 39667023
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaatacc 203  Q
    |||||||| |||||||| |||||||||||||||| ||||  ||||||||||||||||    
T  39667079 ttaatcaccgccacgtcatcaaattagcaaaatggcatgagaatggacaaaaatacc 39667023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 115 - 205
Target Start/End: Complemental strand, 148093 - 148002
Alignment:
Q  115 attaatcatttaaa-tttcgtcccttttcccgattaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccct 205  Q
    |||||||||||||| |||||||| |   |||  ||||| |||| |||||| |||||||||||||||| |||| |||||||||||||| ||||    
T  148093 attaatcatttaaaatttcgtccatgagcccagttaattactgtcacgtcatcaaattagcaaaatggcatgaaaatggacaaaaatgccct 148002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 39701032 - 39701091
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    |||||||||  |||||| |||||||||||||||| ||||| |||||||||||| ||||||    
T  39701032 ttaatcactctcacgtcatcaaattagcaaaatggcatgggaatggacaaaaacaccctc 39701091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 39701212 - 39701153
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    ||||||||||||| ||| |||||||||||||||   |||| |||||||||||||||||||    
T  39701212 ttaatcactgccaagtcatcaaattagcaaaatagtatgggaatggacaaaaataccctc 39701153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 45463196 - 45463255
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    ||||||||| ||| ||| |||||||||||||||  ||||| |||||||||||||||||||    
T  45463196 ttaatcactaccaagtcatcaaattagcaaaatagcatgggaatggacaaaaataccctc 45463255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 54858863 - 54858804
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    ||||||||| ||| ||| |||||||||||||||| ||||  |||||||||||||||||||    
T  54858863 ttaatcactaccaagtcatcaaattagcaaaatggcatgtgaatggacaaaaataccctc 54858804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 95
Target Start/End: Original strand, 9254406 - 9254476
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctc 95  Q
    |||| ||||||||||||||||| || || |||||| |||||||  |||||||| ||| |||||||||||||    
T  9254406 ggctaaaatatgcatttcatccctgcaaatataggccatttgaaatttcatccttgaacttactaatcctc 9254476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 127
Target Start/End: Original strand, 33294144 - 33294246
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    ||||||||||||  |||  |||||| || ||||||| |||||| ||||  ||| |||  ||||||||||| ||| |||||||||| ||| ||||||||||    
T  33294144 ggcttaaatatgttttttgtccatgcaaatataggttatttgaatttttgtccatgaagttactaatccttccaatttgcccctgcaaatattaatcatt 33294243  T
Q  125 taa 127  Q
    |||    
T  33294244 taa 33294246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 25 - 125
Target Start/End: Complemental strand, 22250117 - 22250017
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    ||||||||||||  |||| ||| || || |||||| ||||||| ||||| |||||||  |||||||| || ||| | |||||||| ||| ||||||||||    
T  22250117 ggcttaaatatgtctttcgtccctgcaaatataggccatttgaattttcgtccctgaaattactaattcttccaatatgcccctgcaaatattaatcatt 22250018  T
Q  125 t 125  Q
    |    
T  22250017 t 22250017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 21 - 125
Target Start/End: Original strand, 47862148 - 47862252
Alignment:
Q  21 ttttggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaat 120  Q
    |||||||||||||| |  |||||||| || || |||| ||||||||| ||||| || ||||  ||||||||||| ||| | |||||||| ||| | ||||    
T  47862148 ttttggcttaaataggtctttcatccctgcaaatatatgtcatttgaattttcgtctctgaagttactaatccttccaatctgcccctgcaaatactaat 47862247  T
Q  121 cattt 125  Q
    |||||    
T  47862248 cattt 47862252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 25 - 125
Target Start/End: Complemental strand, 47862535 - 47862436
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    ||||||||||||  |||| ||| ||||| |||||| ||||||| ||||| ||| |||  ||||||||||| | | |||||||||| ||| ||||||||||    
T  47862535 ggcttaaatatgtctttcgtcc-tgtaaatataggccatttgaattttcgtccatgaagttactaatccttctaatttgcccctgcaaatattaatcatt 47862437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 147 - 207
Target Start/End: Complemental strand, 51859709 - 51859650
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctca 207  Q
    ||||||||| ||| ||| |||||||||||||||| ||||| ||||||| ||||||||||||    
T  51859709 ttaatcactcccaagtcatcaaattagcaaaatggcatgggaatggac-aaaataccctca 51859650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 25 - 125
Target Start/End: Complemental strand, 53559771 - 53559671
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    ||||||||||||  |||| ||| || || |||||| ||||||| ||||| |||||||  ||||||||| | ||| | |||||||| ||| ||||||||||    
T  53559771 ggcttaaatatgtctttcgtccctgcaaatataggccatttgaattttcgtccctgaagttactaatcgttccaatctgcccctgcaaatattaatcatt 53559672  T
Q  125 t 125  Q
    |    
T  53559671 t 53559671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 101 - 163
Target Start/End: Complemental strand, 41583583 - 41583520
Alignment:
Q  101 ttgcccctgtaaaaattaatcatttaaa-tttcgtcccttttcccgattaatcactgccacgtc 163  Q
    ||||||||| |||| ||||||||||||| |||||||||| ||| |  |||||||||||||||||    
T  41583583 ttgcccctgcaaaagttaatcatttaaaatttcgtccctcttctcacttaatcactgccacgtc 41583520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 201
Target Start/End: Complemental strand, 5818078 - 5818024
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaata 201  Q
    |||||||||| || ||| |||||||||||||||| ||||| ||| ||||||||||    
T  5818078 ttaatcactgtcaagtcttcaaattagcaaaatggcatgggaatagacaaaaata 5818024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 23 - 81
Target Start/End: Complemental strand, 20601140 - 20601082
Alignment:
Q  23 ttggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctga 81  Q
    ||||||||||||||  |||| ||| ||||||||||||||||| || ||||| |||||||    
T  20601140 ttggcttaaatatgtctttcgtccttgtaattataggtcattcgaattttcgtccctga 20601082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 92
Target Start/End: Original strand, 22249927 - 22249993
Alignment:
Q  26 gcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatc 92  Q
    ||||||||| |  |||||||| || || |||||||||||||| |||||||||||||  |||||||||    
T  22249927 gcttaaataagtctttcatccctgcaaatataggtcatttgaattttcatccctgaagttactaatc 22249993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 39 - 125
Target Start/End: Original strand, 50245871 - 50245957
Alignment:
Q  39 tttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcattt 125  Q
    |||| ||| ||||| |||||||||||||| ||||||||| |||  ||||||||| | ||| | |||| ||| ||| |||||||||||    
T  50245871 tttcgtccctgtaaatataggtcatttgaattttcatccatgaagttactaatcattccaatctgccactgcaaatattaatcattt 50245957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 27 - 125
Target Start/End: Complemental strand, 54961813 - 54961715
Alignment:
Q  27 cttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcattt 125  Q
    ||||||||||  |||| ||| || || |||||||||||||| ||||  |||||||  |||||||||||  || | |||||| ||||| |||||||||||    
T  54961813 cttaaatatgtctttcgtccctgcaaatataggtcatttgaattttagtccctgaagttactaatcctttcaatctgcccccgtaaatattaatcattt 54961715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 206
Target Start/End: Original strand, 11524090 - 11524131
Alignment:
Q  165 tcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    |||||||||||||||| ||||| ||| |||||||||||||||    
T  11524090 tcaaattagcaaaatggcatgggaatagacaaaaataccctc 11524131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 125
Target Start/End: Original strand, 12691405 - 12691506
Alignment:
Q  24 tggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcat 123  Q
    ||||||||||| |  |||| |||||| || |||||| ||||||| ||||| |||||||  ||||||||||| ||| | || ||||  ||| |||||||||    
T  12691405 tggcttaaataggtctttcgtccatgcaaatataggccatttgaattttcgtccctgaagttactaatccttccaatctgtccctacaaatattaatcat 12691504  T
Q  124 tt 125  Q
    ||    
T  12691505 tt 12691506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 125
Target Start/End: Complemental strand, 12691786 - 12691689
Alignment:
Q  28 ttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcattt 125  Q
    |||||||||  |||| ||| || || |||||||||||||| ||||  |||||||  ||||||||||| ||| |  ||||||| ||| |||||||||||    
T  12691786 ttaaatatgtctttcgtccctgcaaatataggtcatttgaatttttgtccctgaagttactaatccttccaatccgcccctgcaaatattaatcattt 12691689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 125
Target Start/End: Original strand, 37677847 - 37677948
Alignment:
Q  24 tggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcat 123  Q
    ||||||||||| |  |||| ||| || || |||||||||||||| ||||| |||||||  ||||||||||| ||  | |||| ||| |||| ||||||||    
T  37677847 tggcttaaataggtctttcttccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccgatctgccactgcaaaatttaatcat 37677946  T
Q  124 tt 125  Q
    ||    
T  37677947 tt 37677948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 125
Target Start/End: Complemental strand, 8287317 - 8287217
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    |||||||||| |  |||| ||| || || |||||| ||||||| ||||| |||||||  ||||||||||| ||| | |||| ||| |||| |||||||||    
T  8287317 ggcttaaataggtctttcgtccctgcaaatataggccatttgaattttcgtccctgaagttactaatccttccaatctgccactgcaaaatttaatcatt 8287218  T
Q  125 t 125  Q
    |    
T  8287217 t 8287217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 125
Target Start/End: Original strand, 22249733 - 22249833
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    ||||||||||||  |||| ||| || || ||||| |||||||| ||||| ||| |||  |||||||||||  || | |||||||| ||| ||||||||||    
T  22249733 ggcttaaatatgtttttcgtccctgcaaatatagatcatttgaattttcgtccatgaagttactaatcctttcaatctgcccctgcaaatattaatcatt 22249832  T
Q  125 t 125  Q
    |    
T  22249833 t 22249833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 125
Target Start/End: Complemental strand, 33294527 - 33294427
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    ||||||||||||  |||| ||| || || ||||||  |||||| ||||| |||||||  ||||||||||| ||  | |||||||| ||| ||||||||||    
T  33294527 ggcttaaatatgtctttcctccctgcaaatataggcaatttgaattttcgtccctgaagttactaatccttccgatctgcccctgcaaatattaatcatt 33294428  T
Q  125 t 125  Q
    |    
T  33294427 t 33294427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 61 - 125
Target Start/End: Original strand, 54961467 - 54961531
Alignment:
Q  61 catttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcattt 125  Q
    ||||||| ||||| |||||||  ||||||||||| ||| | |||||||| ||| |||||||||||    
T  54961467 catttgaattttcgtccctgaagttactaatccttccaatatgcccctgcaaatattaatcattt 54961531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 309; Significance: 1e-174; HSPs: 64)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 309; E-Value: 1e-174
Query Start/End: Original strand, 61 - 470
Target Start/End: Original strand, 32716285 - 32716691
Alignment:
Q  61 catttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatttaaa-tttcgtcccttttcccgattaatcactgcca 159  Q
    |||||||||||| |||| |||| |||||||||||| |||||| ||| |||||||||||| |||||||| |||||||||| |||| |||||||||||||||    
T  32716285 catttgattttttatccttgagtttactaatcctctcattttacccttgtaaaaattaaccatttaaaatttcgtccctcttccagattaatcactgcca 32716384  T
Q  160 cgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctcaaattaatcttcttcactccttcaagcttcccttgagaaacctgattcatttt 259  Q
    |||| |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32716385 cgtcatcaaattagcaaaatggcatgggaatggacaaaaataccctcaaattaatcttcttcactccttcaagcttcccttgagaaacctgattcatttt 32716484  T
Q  260 ttcttctctgagaaatcatcaatctccctgcttcattctttttcttcaagtttccaaacagaagaaagtgaaccaataaagcgatagtgaaaaaagaaag 359  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | ||   ||| |||||||||||||||||||||||    
T  32716485 ttcttccctgagaaatcatcaatctccctgcttcattctttttcttcaagtttccaaacagaacaca-tg---caacaaagcgatagtgaaaaaagaaag 32716580  T
Q  360 tgaaccaataaaggagaaggaagatgaaacctcaatccagacggaattggtagtgcacgtggtggatgctggaggaaggagctgcttgcggcggtgctct 459  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||    
T  32716581 tgaaccaataaaggagaaggaagatgaaacctcaatccagacggaattggtagtgcacgtggtggttgctggaggaaggagctgctcgcggcggtgctct 32716680  T
Q  460 gatcaaatatg 470  Q
    |||||||||||    
T  32716681 gatcaaatatg 32716691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 25 - 207
Target Start/End: Complemental strand, 29193093 - 29192910
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||    
T  29193093 ggcttaaatatgcatttcatccctgtaattataggccatttgatttttcatccctgagcttactaatcctcccatttcgcccctgtaaaaattaattatt 29192994  T
Q  125 t-aaatttcgtcccttttcccgattaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctca 207  Q
    | |||||| |||||| ||||||||||||||||| |||||| |||||||||||||||||||||| ||| ||||||||||||||||    
T  29192993 taaaattttgtccctcttcccgattaatcactgtcacgtcatcaaattagcaaaatgacatgggaattgacaaaaataccctca 29192910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 25 - 204
Target Start/End: Complemental strand, 32717205 - 32717025
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||| | |||||||||||| |||||||||||||||||||||||||||||    
T  32717205 ggcttaaatatgcatttcatccctgtaattataggtcatttgatttttcatccctaaacttactaatccttccattttgcccctgtaaaaattaatcatt 32717106  T
Q  125 t-aaatttcgtcccttttcccgattaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccc 204  Q
    | ||||||||||||| ||||| |||||| ||||||||||| |||||||||||||||||||| | |||||||||||||||||    
T  32717105 taaaatttcgtccctcttcccaattaattactgccacgtcatcaaattagcaaaatgacataggaatggacaaaaataccc 32717025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 25 - 207
Target Start/End: Original strand, 29192035 - 29192218
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    |||| ||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||||||| || ||||||||||||||||||||||||||    
T  29192035 ggctgaaatatgcatttcatccctgtaattataggccatttgatttttcattcctgagcttactaatccttccgttttgcccctgtaaaaattaatcatt 29192134  T
Q  125 t-aaatttcgtcccttttcccgattaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctca 207  Q
    | ||||||||||||| |||||||||||||||||||||||| | |||||||||||||||||||  ||| ||||||||||||||||    
T  29192135 taaaatttcgtccctcttcccgattaatcactgccacgtcattaaattagcaaaatgacatgagaattgacaaaaataccctca 29192218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 21 - 204
Target Start/End: Complemental strand, 45279388 - 45279204
Alignment:
Q  21 ttttggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaat 120  Q
    ||||||||||||||||| |||||||| |||||||||||| | ||||||||||||||||||| |||||||||||| |||||||||||||||||  | ||||    
T  45279388 ttttggcttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaat 45279289  T
Q  121 cattt-aaatttcgtcccttttcccgattaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccc 204  Q
    ||||| ||| ||||||||| ||||||  |||||||||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  45279288 catttgaaagttcgtccctcttcccggataatcactgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 45279204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 25 - 204
Target Start/End: Complemental strand, 48189199 - 48189019
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    ||||||||||||| |||||||| |||||||||||| | |||||||||||||||||||||||||||||||| |||||||||||||||||  | ||||||||    
T  48189199 ggcttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgagcttactaatccttccattttgcccctgtaattactaatcatt 48189100  T
Q  125 t-aaatttcgtcccttttcccgattaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccc 204  Q
    | ||| ||||||||| ||||||  |||||||||||||||| |||||||||||||||| ||||| ||| |||||||||||||    
T  48189099 tgaaagttcgtccctcttcccggataatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaataccc 48189019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 25 - 204
Target Start/End: Complemental strand, 2944766 - 2944586
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    ||||||||||||| |||||||| |||||||||||| | ||||||||||||||||||| |||||||||||  |||||||||||||||||  | ||||||||    
T  2944766 ggcttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccatccattttgcccctgtaattactaatcatt 2944667  T
Q  125 t-aaatttcgtcccttttcccgattaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccc 204  Q
    | ||| ||||||||| ||||||| |||||||||||||||| |||||||||||||||| ||||| ||| |||||||||||||    
T  2944666 tgaaagttcgtccctcttcccgaataatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaataccc 2944586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 20 - 204
Target Start/End: Original strand, 2943908 - 2944093
Alignment:
Q  20 attttggcttaaatatgcatttc-atccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaatta 118  Q
    |||| ||||||||||||| |||| |||| || ||||||||| | ||||||||||||||| |||||||||||||||||| ||||||||||||||||| |||    
T  2943908 atttaggcttaaatatgcttttctatccctgcaattataggccgtttgatttttcatcc-tgagcttactaatcctcctattttgcccctgtaaaagtta 2944006  T
Q  119 atcattt-aaatttcgtcccttttcccgattaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccc 204  Q
    ||||||| ||| ||||||||| |||||| ||||||||||||||||| |||||||||||||||| ||||| ||| |||||||||||||    
T  2944007 atcatttgaaagttcgtccctcttcccggttaatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaataccc 2944093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 21 - 204
Target Start/End: Complemental strand, 11026736 - 11026552
Alignment:
Q  21 ttttggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaat 120  Q
    ||||||||||||||||| |||||||| |||||||||||| | ||||||||||||||||||| ||||| |||||| |||||||||||||||||  | ||||    
T  11026736 ttttggcttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttaccaatccttccattttgcccctgtaattactaat 11026637  T
Q  121 cattt-aaatttcgtcccttttcccgattaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccc 204  Q
    ||||| ||| ||||||||| ||| |||  ||||||||||||||| |||||||||||||||| ||||| ||| |||||||||||||    
T  11026636 catttgaaagttcgtccctcttctcgaaaaatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaataccc 11026552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 30 - 204
Target Start/End: Original strand, 37249204 - 37249379
Alignment:
Q  30 aaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcattt-aaa 128  Q
    |||||||| |||||||| || ||||||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||  | ||||||||| |||    
T  37249204 aaatatgcttttcatccctgcaattataggccgtttgatttttcatccctgagcttattaatcctcccattttgcccctgtaattactaatcatttgaaa 37249303  T
Q  129 tttcgtcccttttcccgattaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccc 204  Q
     ||||||||| | ||||  |||||||||||||||| |||||||||||||||| ||||||||| |||||||||||||    
T  37249304 gttcgtccctctccccggataatcactgccacgtcatcaaattagcaaaatggcatggaaattgacaaaaataccc 37249379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 21 - 204
Target Start/End: Original strand, 1756546 - 1756730
Alignment:
Q  21 ttttggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaat 120  Q
    |||||||||||||||   |||||||| |||||||||||| | ||||||||||||||| ||| |||||||||||| |||||||||||||||||  | ||||    
T  1756546 ttttggcttaaatatatttttcatccttgtaattataggccgtttgatttttcatccatgaacttactaatccttccattttgcccctgtaattactaat 1756645  T
Q  121 cattt-aaatttcgtcccttttcccgattaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccc 204  Q
    ||||| ||| ||||||||| ||||||  |||||||||||||||| |||||||||||||||| ||||| ||| |||||||||||||    
T  1756646 catttgaaagttcgtccctcttcccggataatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaataccc 1756730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 30 - 204
Target Start/End: Original strand, 45278549 - 45278724
Alignment:
Q  30 aaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcattt-aaa 128  Q
    |||||||| |||||||| |||||||||||| | |||||||||||||||||||  ||||||||||| |||||||||||||||||  | ||||||||| |||    
T  45278549 aaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaatttactaatccttccattttgcccctgtaattactaatcatttgaaa 45278648  T
Q  129 tttcgtcccttttcccgattaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccc 204  Q
     ||||||||| ||||||  |||||||||||||||| |||||||||||||||| ||||| ||| |||||||||||||    
T  45278649 gttcgtccctcttcccggataatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaataccc 45278724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 30 - 204
Target Start/End: Original strand, 48188383 - 48188558
Alignment:
Q  30 aaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcattt-aaa 128  Q
    |||||||  |||||||| |||||||||||| | ||||||||||||||||||| |||||||||||| |||||||||||||||||  | ||||||||| |||    
T  48188383 aaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcatttgaaa 48188482  T
Q  129 tttcgtcccttttcccgattaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccc 204  Q
     ||||||||| ||||||  |||||||||||||||| |||||||||||||||| ||||| ||| |||||||||||||    
T  48188483 gttcgtccctcttcccggataatcactgccacgtcatcaaattagcaaaatgccatgggaattgacaaaaataccc 48188558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 30 - 204
Target Start/End: Complemental strand, 37249892 - 37249718
Alignment:
Q  30 aaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcattt-aaa 128  Q
    |||||||| |||||||| || ||||||||| | |||||||||||||||||||||||||||||||||||||| ||||| |||||  | ||||||||| |||    
T  37249892 aaatatgcttttcatcc-tgcaattataggccgtttgatttttcatccctgagcttactaatcctcccattctgcccttgtaattactaatcatttgaaa 37249794  T
Q  129 tttcgtcccttttcccgattaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccc 204  Q
     ||||||||| ||||||  |||||||||||||||| |||||||||||||||| ||||| ||| |||||||||||||    
T  37249793 gttcgtccctcttcccggataatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaataccc 37249718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 25 - 204
Target Start/End: Complemental strand, 1757404 - 1757224
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    ||||||||||||  |||||||| |||||||||||| | ||||||||||||||| ||| |||||||||||| |||||||||||||||||  | ||||||||    
T  1757404 ggcttaaatatgattttcatccctgtaattataggccgtttgatttttcatccatgaacttactaatccttccattttgcccctgtaattactaatcatt 1757305  T
Q  125 t-aaatttcgtcccttttcccgattaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccc 204  Q
    | ||| || |||||| || |||  |||||||||||||||| |||||||||||||||| ||||  ||| |||||||||||||    
T  1757304 tgaaagtttgtccctctttccggataatcactgccacgtcatcaaattagcaaaatggcatgagaattgacaaaaataccc 1757224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 25 - 205
Target Start/End: Original strand, 43105233 - 43105414
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    ||||||||||||  || ||||| |||||||||||| | ||||||||||||||||||| ||||||||||||  ||||||||||||||||  | ||||| ||    
T  43105233 ggcttaaatatgttttacatccttgtaattataggccgtttgatttttcatccctgaacttactaatcctttcattttgcccctgtaattactaatcttt 43105332  T
Q  125 t-aaatttcgtcccttttcccgattaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccct 205  Q
    | ||| |||||| || ||||||  |||||||||||| ||| |||||||||||||||| ||||| ||| ||||||||||||||    
T  43105333 tgaaagttcgtctctcttcccggataatcactgccatgtcatcaaattagcaaaatggcatgggaattgacaaaaataccct 43105414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 39 - 204
Target Start/End: Complemental strand, 43105920 - 43105754
Alignment:
Q  39 tttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcattt-aaatttcgtccc 137  Q
    |||||||| |||||||||||| | ||||||||||||||||||| ||||||||||||  ||||||||||||||||  | ||||||||| ||| ||||||||    
T  43105920 tttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatcctttcattttgcccctgtaattactaatcatttgaaagttcgtccc 43105821  T
Q  138 ttttcccgattaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccc 204  Q
    | ||| ||  |||||||| ||||||| |||||||||||||||| ||| | ||| |||||||||||||    
T  43105820 tcttctcggataatcactaccacgtcatcaaattagcaaaatggcattggaattgacaaaaataccc 43105754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 48 - 204
Target Start/End: Original strand, 11025960 - 11026117
Alignment:
Q  48 tgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcattt-aaatttcgtcccttttcccga 146  Q
    |||||||||| | | ||||||||||||||||||| |||||||||||| |||||||||| || |||  | ||||||||| ||| ||||||||| ||||||     
T  11025960 tgtaattataagccgtttgatttttcatccctgaacttactaatccttccattttgcctctataattactaatcatttgaaagttcgtccctcttcccgg 11026059  T
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccc 204  Q
    ||||||||||||| ||| |||||||||||||||  ||||||||| |||||||||||||    
T  11026060 ttaatcactgccatgtcatcaaattagcaaaatcgcatggaaattgacaaaaataccc 11026117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 25 - 125
Target Start/End: Complemental strand, 22736790 - 22736690
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    ||||||||||||  |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||    
T  22736790 ggcttaaatatgtttttcatccctgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaattactaatcatt 22736691  T
Q  125 t 125  Q
    |    
T  22736690 t 22736690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 30 - 125
Target Start/End: Complemental strand, 44482048 - 44481953
Alignment:
Q  30 aaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcattt 125  Q
    |||||||| |||||||| ||||||||| || ||||||||||||||||| ||||||||||||||||||||||||||||||||||  | |||||||||    
T  44482048 aaatatgcttttcatccctgtaattatgggccatttgatttttcatccatgagcttactaatcctcccattttgcccctgtaattactaatcattt 44481953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 30 - 125
Target Start/End: Original strand, 44476054 - 44476149
Alignment:
Q  30 aaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcattt 125  Q
    |||||||  |||||||| ||||||||| || ||||||||||||||||||||| ||||||||||||||||||||||||| ||||  | |||||||||    
T  44476054 aaatatgtttttcatccctgtaattatgggccatttgatttttcatccctgaacttactaatcctcccattttgcccccgtaattactaatcattt 44476149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 3596412 - 3596353
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    |||||||||| |||||| |||||||||||||||||||||| |||||||||||||||||||    
T  3596412 ttaatcactgtcacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccctc 3596353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 35643974 - 35644033
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    ||||||||||||||||| |||||||||||||||| ||||| |||||||||||||||||||    
T  35643974 ttaatcactgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 35644033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 40788723 - 40788664
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    ||||||||||||||||| |||||||||||||||| ||||| |||||||||||||||||||    
T  40788723 ttaatcactgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 40788664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 41422095 - 41422154
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    |||||||||| |||||| |||||||||||||||||||||| |||||||||||||||||||    
T  41422095 ttaatcactgtcacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccctc 41422154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 3469323 - 3469382
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    |||||||| |||||||| |||||||||||||||| ||||| |||||||||||||||||||    
T  3469323 ttaatcacggccacgtcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 3469382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 47551616 - 47551675
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    |||||||||||||| || |||||||||||||||| ||||||||||||||||| |||||||    
T  47551616 ttaatcactgccacatcatcaaattagcaaaatggcatggaaatggacaaaattaccctc 47551675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 158 - 207
Target Start/End: Original strand, 10294695 - 10294744
Alignment:
Q  158 cacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctca 207  Q
    |||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  10294695 cacgtcatcaaattagcaaaatgacatggaaatgtacaaaaataccctca 10294744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 147 - 207
Target Start/End: Original strand, 6956372 - 6956432
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctca 207  Q
    ||||| ||||||||||| | |||||| ||||||||||||| ||||||||||||||||||||    
T  6956372 ttaattactgccacgtcataaaattaacaaaatgacatgggaatggacaaaaataccctca 6956432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 147 - 207
Target Start/End: Original strand, 13948903 - 13948963
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctca 207  Q
    |||||||||| || ||| |||||||||||||||| ||||| ||||||||||||||||||||    
T  13948903 ttaatcactgtcaagtcatcaaattagcaaaatggcatgggaatggacaaaaataccctca 13948963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 69 - 125
Target Start/End: Original strand, 22735403 - 22735459
Alignment:
Q  69 ttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcattt 125  Q
    ||||||||||| ||||||||||||||||||||||||||||||||  | |||||||||    
T  22735403 ttttcatccctaagcttactaatcctcccattttgcccctgtaattactaatcattt 22735459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 150 - 206
Target Start/End: Original strand, 29686067 - 29686123
Alignment:
Q  150 atcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    |||||||||||||| |||||||||||||||| ||||| |||||| ||||||||||||    
T  29686067 atcactgccacgtcatcaaattagcaaaatggcatgggaatggagaaaaataccctc 29686123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 3469503 - 3469444
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    ||||||||| ||| ||| |||||||||||||||| ||||| |||||||||||||||||||    
T  3469503 ttaatcactaccaagtcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 3469444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 29118661 - 29118720
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    |||||||||| || ||| |||||||||||||||| ||||| |||||||||||||||||||    
T  29118661 ttaatcactgtcaagtcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 29118720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 29118841 - 29118782
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    ||||||||||||||||| ||| |||||||||||| ||||| ||| |||||||||||||||    
T  29118841 ttaatcactgccacgtcatcacattagcaaaatggcatgggaatagacaaaaataccctc 29118782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 32306547 - 32306606
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    ||||||||| ||||||| |||||||||||||||||| ||| |||||||||||||| ||||    
T  32306547 ttaatcactaccacgtcatcaaattagcaaaatgacttgggaatggacaaaaatatcctc 32306606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 52032261 - 52032320
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    ||||||||| ||||||| |||||||| ||||||| ||||| |||||||||||||||||||    
T  52032261 ttaatcactaccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctc 52032320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 52032442 - 52032383
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    ||||||||  ||| ||| |||||||||||||||||||||| |||||||||||||||||||    
T  52032442 ttaatcaccaccaagtcatcaaattagcaaaatgacatgggaatggacaaaaataccctc 52032383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 147 - 205
Target Start/End: Complemental strand, 37778576 - 37778518
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccct 205  Q
    ||||||||||||||||| |||||||||||||||| ||||  ||| ||||||||||||||    
T  37778576 ttaatcactgccacgtcatcaaattagcaaaatggcatgagaatagacaaaaataccct 37778518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 24 - 125
Target Start/End: Original strand, 53037026 - 53037127
Alignment:
Q  24 tggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcat 123  Q
    ||||||||||| |  |||||||| ||||| |||||||||||||| ||||| |||||||  ||||||||||| ||| | | |||||| ||| |||| ||||    
T  53037026 tggcttaaataagtctttcatccctgtaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatatacccctgcaaatattagtcat 53037125  T
Q  124 tt 125  Q
    ||    
T  53037126 tt 53037127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 54 - 127
Target Start/End: Original strand, 55036698 - 55036771
Alignment:
Q  54 tataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatttaa 127  Q
    |||||||||||||| ||||||| |||||  ||||||||||| ||| | |||||||| ||| |||||||||||||    
T  55036698 tataggtcatttgaattttcattcctgaagttactaatccttccaatctgcccctgcaaatattaatcatttaa 55036771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 25 - 125
Target Start/End: Original strand, 1741387 - 1741487
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    ||||||||||||  |||| ||| || || |||||||||||||| ||||| |||||||  ||||||||||| ||| | ||||| || ||| ||||||||||    
T  1741387 ggcttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccttgcaaatattaatcatt 1741486  T
Q  125 t 125  Q
    |    
T  1741487 t 1741487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 116 - 207
Target Start/End: Complemental strand, 9368638 - 9368546
Alignment:
Q  116 ttaatcatttaaa-tttcgtcccttttcccgattaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctca 207  Q
    ||||||||||||| |||||| ||||  |||  ||||| | ||||||||| |||||||| ||||||| ||||  ||||||||||||||||||||    
T  9368638 ttaatcatttaaaatttcgttccttaacccacttaatgattgccacgtcatcaaattaacaaaatggcatgagaatggacaaaaataccctca 9368546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 147 - 207
Target Start/End: Original strand, 40788543 - 40788603
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctca 207  Q
    ||||||||| |||  || |||||||||||||||| ||||| ||||||||||||||||||||    
T  40788543 ttaatcactaccaaatcatcaaattagcaaaatggcatgggaatggacaaaaataccctca 40788603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 48 - 128
Target Start/End: Complemental strand, 46670616 - 46670536
Alignment:
Q  48 tgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatttaaa 128  Q
    ||||| |||||||||||||| |||||||||||||  |||||||| || |||||||| |  || ||| ||||||||||||||    
T  46670616 tgtaaatataggtcatttgaattttcatccctgaagttactaattcttccattttgtcattgcaaatattaatcatttaaa 46670536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 26 - 125
Target Start/End: Complemental strand, 10998256 - 10998157
Alignment:
Q  26 gcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcattt 125  Q
    |||||||||||  |||| ||  || || |||||||||||||| ||||| |||||||  ||||||||||| ||| | |||||||| ||| |||||||||||    
T  10998256 gcttaaatatgtttttcgtctctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcattt 10998157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 206
Target Start/End: Complemental strand, 29686224 - 29686185
Alignment:
Q  167 aaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  29686224 aaattagcaaaatggcatggaaatggacaaaaataccctc 29686185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 147 - 201
Target Start/End: Original strand, 11910822 - 11910876
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaata 201  Q
    ||||||||| ||||||  |||||||||||||||| ||||| ||||||||||||||    
T  11910822 ttaatcactaccacgttatcaaattagcaaaatggcatgggaatggacaaaaata 11910876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 147 - 205
Target Start/End: Complemental strand, 32306727 - 32306669
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccct 205  Q
    ||||||||| ||| ||| |||||||||||||||| ||| | ||||||||||||||||||    
T  32306727 ttaatcactaccaagtcatcaaattagcaaaatggcataggaatggacaaaaataccct 32306669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 165 - 207
Target Start/End: Complemental strand, 43608769 - 43608727
Alignment:
Q  165 tcaaattagcaaaatgacatggaaatggacaaaaataccctca 207  Q
    |||||||||||| ||| ||||||||||||||||||||||||||    
T  43608769 tcaaattagcaagatggcatggaaatggacaaaaataccctca 43608727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 3596232 - 3596288
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaatacc 203  Q
    ||||||||| ||| ||| |||||||||||||||| ||||  ||||||||||||||||    
T  3596232 ttaatcactaccatgtcatcaaattagcaaaatggcatgagaatggacaaaaatacc 3596288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 25 - 125
Target Start/End: Original strand, 11312735 - 11312835
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    ||||||||||||  |||| ||| | ||| |||||||||||||| ||||| |||||||  |||| ||||||  || | |||||||| ||| ||||||||||    
T  11312735 ggcttaaatatgtctttcgtccctctaaatataggtcatttgaattttcgtccctgaagttaccaatccttgcagtctgcccctgcaaatattaatcatt 11312834  T
Q  125 t 125  Q
    |    
T  11312835 t 11312835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 25 - 125
Target Start/End: Original strand, 22129006 - 22129106
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    |||||||||| |  ||||||||  |||| ||||||  |||||| ||||| || ||||  ||||||||||| ||| |||||||||| ||| ||||||||||    
T  22129006 ggcttaaataggtctttcatccccgtaaatataggctatttgaattttcgtcactgaagttactaatccttccaatttgcccctgcaaatattaatcatt 22129105  T
Q  125 t 125  Q
    |    
T  22129106 t 22129106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 10294862 - 10294804
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    ||||||||||||| ||| |||||||| |||| || ||||| |||||||||||||||||||    
T  10294862 ttaatcactgccaagtcatcaaattaccaaa-tggcatgggaatggacaaaaataccctc 10294804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 10307678 - 10307619
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    |||||||||  |||||| | |||||||||||||  ||||| |||||||||||||||||||    
T  10307678 ttaatcactcgcacgtcataaaattagcaaaattgcatgggaatggacaaaaataccctc 10307619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 92
Target Start/End: Original strand, 21300327 - 21300393
Alignment:
Q  26 gcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatc 92  Q
    ||||||||| |  |||||||| || || |||||||||||||| |||||||||||||  |||||||||    
T  21300327 gcttaaataggtctttcatccctgcaaatataggtcatttgaattttcatccctgaagttactaatc 21300393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 92
Target Start/End: Complemental strand, 22129196 - 22129130
Alignment:
Q  26 gcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatc 92  Q
    ||||||||| |  |||||||| ||||| |||||||||||||| ||||| |||||||  |||||||||    
T  22129196 gcttaaataagtctttcatccctgtaaatataggtcatttgaattttcgtccctgaagttactaatc 22129130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 165 - 207
Target Start/End: Complemental strand, 35759088 - 35759046
Alignment:
Q  165 tcaaattagcaaaatgacatggaaatggacaaaaataccctca 207  Q
    |||||||||||||||| ||||  ||||||||||||||||||||    
T  35759088 tcaaattagcaaaatggcatgagaatggacaaaaataccctca 35759046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 39 - 125
Target Start/End: Original strand, 40256888 - 40256974
Alignment:
Q  39 tttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcattt 125  Q
    |||| |||||| || ||||||| |||||| ||||| |||||||  ||||||||||| ||| | ||||| || ||| |||||||||||    
T  40256888 tttcgtccatgcaaatataggttatttgaattttcgtccctgaagttactaatccttccaatatgcccttgcaaatattaatcattt 40256974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 163
Target Start/End: Original strand, 9367831 - 9367880
Alignment:
Q  115 attaatcatttaaa-tttcgtcccttttcccgattaatcactgccacgtc 163  Q
    |||||||||||||| ||||||||||  |||| ||||||||||||||||||    
T  9367831 attaatcatttaaaatttcgtccctcatcccaattaatcactgccacgtc 9367880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 94
Target Start/End: Original strand, 10749318 - 10749387
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcct 94  Q
    |||||||||| |  |||| ||| ||||| |||||||||||||| ||||| |||||||  |||||||||||    
T  10749318 ggcttaaataggtctttcgtccctgtaaatataggtcatttgaattttcgtccctgaagttactaatcct 10749387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 125
Target Start/End: Complemental strand, 30890568 - 30890491
Alignment:
Q  48 tgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcattt 125  Q
    ||||| |||||||||||||| |||||||||||||  ||||||||| |  || | |||| ||| |||| ||||||||||    
T  30890568 tgtaaatataggtcatttgaattttcatccctgaagttactaatcttttcaatctgccactgcaaaatttaatcattt 30890491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 125
Target Start/End: Complemental strand, 55037050 - 55036953
Alignment:
Q  28 ttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcattt 125  Q
    |||||||||  |||| ||| || || |||||||||||||| ||||| | | |||  ||||||||||| ||| | |||||||| ||| |||||||||||    
T  55037050 ttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgttcttgaagttactaatccttccaatctgcccctgcaaatattaatcattt 55036953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 125
Target Start/End: Original strand, 51279231 - 51279331
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    ||||||||||||  |||| ||| || || ||||||| |||||| ||||| |||| ||  ||||||||| |  || |||||||||| ||| ||||||||||    
T  51279231 ggcttaaatatgtctttcgtccctgcaaatataggttatttgaattttcgtcccagaagttactaatcatttcaatttgcccctgcaaatattaatcatt 51279330  T
Q  125 t 125  Q
    |    
T  51279331 t 51279331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 221; Significance: 1e-121; HSPs: 71)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 116 - 460
Target Start/End: Complemental strand, 34177307 - 34176966
Alignment:
Q  116 ttaatcatttaaa-tttcgtcccttttcccgattaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctcaaattaat 214  Q
    ||||||||||||| |||||||||||  |||  ||||| |||||||| || |||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  34177307 ttaatcatttaaaatttcgtcccttgacccacttaatgactgccacatcatcaaattagcaaaatggcatgggaatggacaaaaataccctcaaattaat 34177208  T
Q  215 cttcttcactccttcaagcttcccttgagaaacctgattcatt-ttttcttctctgagaaatcatcaatctccctgcttcattctttttcttcaagtttc 313  Q
    |||||||||||||||||||||| | |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34177207 cttcttcactccttcaagcttctc-tgagaaacctaattcattattttcttctctgagaaatcatcaatctccctgcttcattctttttcttcaagtttc 34177109  T
Q  314 caaacagaagaaagtgaaccaataaagcgatagtgaaaaaagaaagtgaaccaataaaggagaaggaagatgaaacctcaatccagacggaattggtagt 413  Q
    ||||||||| | | ||   ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||    
T  34177108 caaacagaacaca-tg---cagcaaagcgatagtgaaaaaagaaagtgaaccaataaaggagaaggaagatgaaacctcaatccagacggaatcagtagt 34177013  T
Q  414 gcacgtggtggatgctggaggaaggagctgcttgcggcggtgctctg 460  Q
    ||||||||||| ||||||||||||||| |||| ||||||||||||||    
T  34177012 gcacgtggtggttgctggaggaaggagttgctcgcggcggtgctctg 34176966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 25 - 204
Target Start/End: Original strand, 34213764 - 34213944
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    ||||||||||||| |||||||| || ||||||||| | |||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  34213764 ggcttaaatatgcttttcatccctgcaattataggccgtttgatttttcatccctgagcttactaatcctcctattttgcccctgtaaaagttaatcatt 34213863  T
Q  125 t-aaatttcgtcccttttcccgattaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccc 204  Q
    | ||| ||||||||| |||||| ||||||||||||||||| |||||||||||||||| ||||| ||| |||||||||||||    
T  34213864 tgaaagttcgtccctcttcccggttaatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaataccc 34213944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 20 - 204
Target Start/End: Original strand, 34665765 - 34665950
Alignment:
Q  20 attttggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaa 119  Q
    |||| ||||||||||||| |||||||| |||||||||||| | ||||||||||||||||||| |||||||||||| |||||||||||||||||  | |||    
T  34665765 atttaggcttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaa 34665864  T
Q  120 tcattt-aaatttcgtcccttttcccgattaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccc 204  Q
    |||||| ||| ||||||||| ||||||  |||||||||||||||| |||||||||||||||| ||||| ||| |||||||||||||    
T  34665865 tcatttgaaagttcgtccctcttcccggataatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaataccc 34665950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 25 - 204
Target Start/End: Complemental strand, 34214629 - 34214448
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttca-tccctgagcttactaatcctcccattttgcccctgtaaaaattaatcat 123  Q
    ||||||||||||| |||||||| |||||||||||| | |||||||||||| ||||||| |||||||||||| |||||||||||||||||  | |||||||    
T  34214629 ggcttaaatatgcttttcatccctgtaattataggccgtttgatttttcaatccctgaacttactaatccttccattttgcccctgtaattactaatcat 34214530  T
Q  124 tt-aaatttcgtcccttttcccgattaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccc 204  Q
    || ||| ||||||||| ||||||| ||||||||||||| || |||||||||||||||| ||||| ||| |||||||||||||    
T  34214529 ttgaaagttcgtccctcttcccgaataatcactgccacatcatcaaattagcaaaatggcatgggaattgacaaaaataccc 34214448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 30 - 204
Target Start/End: Complemental strand, 34666635 - 34666461
Alignment:
Q  30 aaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcattt-aaa 128  Q
    |||||||  |||||||  |||||||||||| | ||||||||||||||||||| |||||||||||| |||||||| ||||||||  | ||||||||| |||    
T  34666635 aaatatgtttttcatcgctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttg-ccctgtaattactaatcatttgaaa 34666537  T
Q  129 tttcgtcccttttcccgattaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccc 204  Q
     ||||||||| ||||||  |||||||||||||||| |||||||||||||||| ||||  ||| |||||||||||||    
T  34666536 gttcgtccctcttcccggataatcactgccacgtcatcaaattagcaaaatggcatgagaattgacaaaaataccc 34666461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 20 - 125
Target Start/End: Complemental strand, 1232902 - 1232799
Alignment:
Q  20 attttggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaa 119  Q
    |||| |||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||    ||||||||||||||||||||||||||||||    
T  1232902 atttaggcttaaatatgcatttcatccctgtaattataggccatttgatttttcatccctgagctt--gtatcctcccattttgcccctgtaaaaattaa 1232805  T
Q  120 tcattt 125  Q
    ||||||    
T  1232804 tcattt 1232799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 25 - 125
Target Start/End: Complemental strand, 25288176 - 25288076
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    |||||||||||||||||||||  || ||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| ||| ||||||||||    
T  25288176 ggcttaaatatgcatttcatcactgcaattataggtcatttgatttttcatccctgaacttactaatcctctcattttgcccctgcaaatattaatcatt 25288077  T
Q  125 t 125  Q
    |    
T  25288076 t 25288076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 25 - 125
Target Start/End: Original strand, 38598964 - 38599064
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    |||||||||||||||||||||| || ||||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||||| ||| ||||||||||    
T  38598964 ggcttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctctcattttgcccctgcaaatattaatcatt 38599063  T
Q  125 t 125  Q
    |    
T  38599064 t 38599064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 26 - 125
Target Start/End: Original strand, 1231527 - 1231626
Alignment:
Q  26 gcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcattt 125  Q
    ||||||||||||||||||||| |  ||||||||| | ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  1231527 gcttaaatatgcatttcatccctacaattataggccctttgatttttcatccatgagcttactaatcctcccattttacccctgtaaaaattaatcattt 1231626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 25 - 109
Target Start/End: Complemental strand, 33497716 - 33497632
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctg 109  Q
    ||||||||||||| |||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  33497716 ggcttaaatatgcttttcatccctgtaattatagggcatttgatttttcatccatgagcttactaatcctcccattttgcccctg 33497632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 25 - 125
Target Start/End: Complemental strand, 7393245 - 7393145
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    ||||||||||  |||||||||| || ||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||| ||| ||||||||||    
T  7393245 ggcttaaatagacatttcatccctgcaattataggtcatttgatttttcatccctgaacttactaatcctcccattttatccctgcaaatattaatcatt 7393146  T
Q  125 t 125  Q
    |    
T  7393145 t 7393145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 24 - 125
Target Start/End: Original strand, 4970124 - 4970225
Alignment:
Q  24 tggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcat 123  Q
    ||||| ||||||||||||||||| || |||||  ||||||||||  |||||||||||| |||||||||||| |||||||||||||| ||| ||||| |||    
T  4970124 tggctaaaatatgcatttcatccctgcaattaggggtcatttgaaatttcatccctgaacttactaatccttccattttgcccctgcaaatattaagcat 4970223  T
Q  124 tt 125  Q
    ||    
T  4970224 tt 4970225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 10445638 - 10445579
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  10445638 ttaatcactgccacgtcatcaaattagcaaaatggcatggaaatggacaaaaataccctc 10445579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 22 - 125
Target Start/End: Original strand, 24377178 - 24377281
Alignment:
Q  22 tttggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatc 121  Q
    ||||||| ||||||||||||||| | || |||||  ||||||||||  |||||||||||| |||||||||||||||||||| |||||| ||| ||||| |    
T  24377178 tttggctaaaatatgcatttcattcttgcaattaggggtcatttgaagtttcatccctgaacttactaatcctcccatttttcccctgcaaatattaagc 24377277  T
Q  122 attt 125  Q
    ||||    
T  24377278 attt 24377281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 25124866 - 25124807
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||    
T  25124866 ttaatcactgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccctc 25124807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 116 - 204
Target Start/End: Original strand, 2534786 - 2534875
Alignment:
Q  116 ttaatcatttaaa-tttcgtcccttttcccgattaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccc 204  Q
    ||||||||||||| |||||||||| |||||  |||||||||||||| || ||||||||||||||||  |||||||| |||||||||||||    
T  2534786 ttaatcatttaaaatttcgtccctattcccagttaatcactgccacatcatcaaattagcaaaatggtatggaaattgacaaaaataccc 2534875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 29 - 106
Target Start/End: Original strand, 33497020 - 33497097
Alignment:
Q  29 taaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgccc 106  Q
    ||||||||  |||||| |||||||||||||||||||||||||||||| | ||| |||||||||||| |||||||||||    
T  33497020 taaatatgattttcattcatgtaattataggtcatttgatttttcattcttgaacttactaatccttccattttgccc 33497097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 15230234 - 15230175
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    ||||||||||||||||| |||||||||||||||| ||||| |||||||||||||||||||    
T  15230234 ttaatcactgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 15230175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 39474668 - 39474727
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    |||||||||||||| || |||||||||||||||| |||||||||||||||||||||||||    
T  39474668 ttaatcactgccacatcatcaaattagcaaaatggcatggaaatggacaaaaataccctc 39474727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 32 - 109
Target Start/End: Complemental strand, 24379089 - 24379012
Alignment:
Q  32 atatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctg 109  Q
    ||||||||||||||| || |||||  ||||||||||| |||||||| ||| |||||||||||||| ||||||||||||    
T  24379089 atatgcatttcatccctgcaattaggggtcatttgatatttcatccttgaacttactaatcctcctattttgcccctg 24379012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 101 - 204
Target Start/End: Original strand, 11761916 - 11762020
Alignment:
Q  101 ttgcccctgtaaaaattaatcatttaaa-tttcgtcccttttcccgattaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaa 199  Q
    ||||||||| |||  ||||||||||||| |||||| |||  || |  ||||||||||||||||| |||||||||||||||  ||||| ||||||||||||    
T  11761916 ttgcccctgcaaacgttaatcatttaaaatttcgtacctcatcactgttaatcactgccacgtcatcaaattagcaaaatagcatgggaatggacaaaaa 11762015  T
Q  200 taccc 204  Q
    |||||    
T  11762016 taccc 11762020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 147 - 207
Target Start/End: Complemental strand, 35634402 - 35634342
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctca 207  Q
    |||||||||| |||||| |||||||||||||||| ||||| ||||||||||||||||||||    
T  35634402 ttaatcactgtcacgtcatcaaattagcaaaatggcatgggaatggacaaaaataccctca 35634342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 25 - 96
Target Start/End: Complemental strand, 4463526 - 4463455
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcc 96  Q
    |||||||||||||||||||||| || || |||||| |||||||  |||||||||||| ||||||||||||||    
T  4463526 ggcttaaatatgcatttcatccctgcaagtataggccatttgaaatttcatccctgaacttactaatcctcc 4463455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 6471813 - 6471872
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||| ||||||| ||||    
T  6471813 ttaatcactgccacgtcatcaaattagcaaaatgacatgggaatggataaaaatatcctc 6471872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 25 - 102
Target Start/End: Original strand, 29574742 - 29574819
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccatttt 102  Q
    |||| ||||||||||||||||| || || ||||||||||||||  |||||||||| | |||||||||||| |||||||    
T  29574742 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccctaaacttactaatccttccatttt 29574819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 116 - 207
Target Start/End: Complemental strand, 2535887 - 2535795
Alignment:
Q  116 ttaatcatttaaa-tttcgtcccttttcccgattaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctca 207  Q
    ||||||||||||| |||||||||||  |||  ||||| |||||||| || ||||||||| |||||| ||||| ||||||||||||||| ||||    
T  2535887 ttaatcatttaaaatttcgtcccttgacccacttaatgactgccacatcatcaaattagtaaaatggcatgggaatggacaaaaatacactca 2535795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 21432816 - 21432872
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaatacc 203  Q
    ||||||||| ||| ||| |||||||||||||||| ||||||||||||||||||||||    
T  21432816 ttaatcactcccaagtcatcaaattagcaaaatggcatggaaatggacaaaaatacc 21432872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 21432996 - 21432937
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    |||||||||| |||||  |||||||||||||||||||||| |||||| ||||||||||||    
T  21432996 ttaatcactgacacgttatcaaattagcaaaatgacatgggaatggataaaaataccctc 21432937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 42945237 - 42945296
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    ||||||||||||| ||| ||||||||| |||||| ||||| |||||||||||||||||||    
T  42945237 ttaatcactgccaagtcatcaaattagtaaaatggcatgggaatggacaaaaataccctc 42945296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 42945417 - 42945358
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    ||||||||||||| ||| ||||||||| |||||| ||||| |||||||||||||||||||    
T  42945417 ttaatcactgccaagtcatcaaattagtaaaatggcatgggaatggacaaaaataccctc 42945358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 44664631 - 44664690
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    ||||||||||||||||| |||||||||||||||| || || |||||||||||||| ||||    
T  44664631 ttaatcactgccacgtcatcaaattagcaaaatggcacgggaatggacaaaaatatcctc 44664690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 67 - 125
Target Start/End: Original strand, 7392250 - 7392308
Alignment:
Q  67 atttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcattt 125  Q
    ||||||||||||||| ||||||||||||||||||||  ||||| ||| |||||||||||    
T  7392250 atttttcatccctgaacttactaatcctcccattttatccctgcaaatattaatcattt 7392308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 23 - 105
Target Start/End: Original strand, 27436561 - 27436643
Alignment:
Q  23 ttggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcc 105  Q
    |||||||||||||||||||||||| || || |||||||| ||||| ||||| |||||||  ||||||||| |  |||||||||    
T  27436561 ttggcttaaatatgcatttcatccctgcaaatataggtcgtttgaattttcgtccctgaagttactaatcttttcattttgcc 27436643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 147 - 207
Target Start/End: Original strand, 15230054 - 15230114
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctca 207  Q
    ||||||||| ||| ||  |||||||||||||||| ||||| ||||||||||||||||||||    
T  15230054 ttaatcactaccaagttatcaaattagcaaaatggcatgggaatggacaaaaataccctca 15230114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 125
Target Start/End: Original strand, 23424508 - 23424612
Alignment:
Q  21 ttttggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaat 120  Q
    |||||||||||||| |  |||||||| ||||| |||||||||||||| ||||  |||||||  |||||||| ||  || | |||||||| ||| ||||||    
T  23424508 ttttggcttaaataggtctttcatccctgtaaatataggtcatttgaatttttgtccctgaagttactaattctaacaatctgcccctgcaaatattaat 23424607  T
Q  121 cattt 125  Q
    |||||    
T  23424608 cattt 23424612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 25 - 125
Target Start/End: Original strand, 25287792 - 25287892
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    ||||||||||||  |||| ||| ||||| ||| || ||||||| ||||| |||||||  ||||||||||| ||| | |||||||| ||| ||||||||||    
T  25287792 ggcttaaatatgtctttcgtccctgtaaatattggccatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcatt 25287891  T
Q  125 t 125  Q
    |    
T  25287892 t 25287892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 41353876 - 41353820
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaatacc 203  Q
    |||||||| | |||||| |||||||||||||||||||||  ||||||||||||||||    
T  41353876 ttaatcaccgtcacgtcatcaaattagcaaaatgacatgagaatggacaaaaatacc 41353820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 27500211 - 27500270
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    |||||||||  || ||| |||||||||||||||||||||  |||||||||||||||||||    
T  27500211 ttaatcactatcaagtcatcaaattagcaaaatgacatgagaatggacaaaaataccctc 27500270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 23 - 105
Target Start/End: Complemental strand, 27437621 - 27437539
Alignment:
Q  23 ttggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcc 105  Q
    |||||||||||||||||||||||| || || |||||| | ||||| ||||| |||||||  ||||||||| |  |||||||||    
T  27437621 ttggcttaaatatgcatttcatccctgcaaatataggccgtttgaattttcgtccctgaagttactaatcttttcattttgcc 27437539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 27 - 125
Target Start/End: Original strand, 41801818 - 41801916
Alignment:
Q  27 cttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcattt 125  Q
    ||||||||||  |||| ||| || || |||||||||||||| ||||| | |||||  ||||||||||| ||| | |||||||| ||| |||||||||||    
T  41801818 cttaaatatgtttttcgtccctgcaaatataggtcatttgaattttcgttcctgaagttactaatccttccaatctgcccctgcaaatattaatcattt 41801916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 147 - 196
Target Start/End: Complemental strand, 8997992 - 8997943
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaa 196  Q
    |||||||||| |||||| |||||||||||||||| ||||| |||||||||    
T  8997992 ttaatcactgtcacgtcatcaaattagcaaaatggcatgggaatggacaa 8997943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 36574817 - 36574890
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctccca 98  Q
    |||| ||||||||||||||||  || |  |||||| |||||||  |||||||||||| ||||||||||||||||    
T  36574817 ggctaaaatatgcatttcatctctgcatatatagggcatttgaaatttcatccctgaacttactaatcctccca 36574890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 127
Target Start/End: Complemental strand, 31690277 - 31690178
Alignment:
Q  27 cttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcattta 126  Q
    |||||||||| ||||| ||| ||||| ||||||||| |||| ||||| |||||||  ||||||||| | ||| | |||| ||| ||| ||||||||||||    
T  31690277 cttaaatatgtatttcgtccctgtaaatataggtca-ttgaattttcgtccctgaagttactaatcattccaatctgccactgcaaatattaatcattta 31690179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 21 - 97
Target Start/End: Complemental strand, 36576105 - 36576029
Alignment:
Q  21 ttttggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctccc 97  Q
    |||||| | ||||||| ||||||||| ||||| |||| | |||||||  |||||||||||| ||||| |||||||||    
T  36576105 ttttgggtaaaatatgtatttcatccctgtaaatataagccatttgaaatttcatccctgaacttaccaatcctccc 36576029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 25 - 125
Target Start/End: Complemental strand, 36623737 - 36623637
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    ||||||||||||  |||| ||| || || |||||| ||||||| ||||| |||||||  |||||||| || ||| | |||||||| ||| ||||||||||    
T  36623737 ggcttaaatatgtctttcgtccctgcaaatataggccatttgaattttcgtccctgaaattactaattcttccaatatgcccctgcaaatattaatcatt 36623638  T
Q  125 t 125  Q
    |    
T  36623637 t 36623637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 22 - 94
Target Start/End: Complemental strand, 38600337 - 38600265
Alignment:
Q  22 tttggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcct 94  Q
    ||||||||||||| ||||||| ||| || || ||||||||||||||  |||| |||||||  |||||||||||    
T  38600337 tttggcttaaataggcatttcgtccctgcaaatataggtcatttgaaatttcgtccctgaagttactaatcct 38600265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 25 - 125
Target Start/End: Complemental strand, 40422544 - 40422444
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    |||||||||| |  |||||||| || || |||||||||||||| ||||| |||||||  ||||||||||| | | | |||| ||| ||| ||||||||||    
T  40422544 ggcttaaataggtctttcatccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttcaaatctgccactgcaaatattaatcatt 40422445  T
Q  125 t 125  Q
    |    
T  40422444 t 40422444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 25 - 125
Target Start/End: Original strand, 43866711 - 43866811
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    ||||||||||||  |||| ||| || || |||||| ||||||| ||||| |||||||  |||||||| || ||| | |||||||| ||| ||||||||||    
T  43866711 ggcttaaatatgtctttcgtccctgcaaatataggccatttgaattttcgtccctgaaattactaattcttccaatatgcccctgcaaatattaatcatt 43866810  T
Q  125 t 125  Q
    |    
T  43866811 t 43866811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 7587 - 7642
Alignment:
Q  26 gcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctga 81  Q
    ||||||||| || |||||||| ||||| |||||||||||||| ||||| |||||||    
T  7587 gcttaaataggcctttcatccctgtaaatataggtcatttgaattttcgtccctga 7642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 147 - 202
Target Start/End: Original strand, 7983551 - 7983606
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaatac 202  Q
    ||||||||| | | ||| ||||||||| ||||||||||| ||||||||||||||||    
T  7983551 ttaatcactacaaagtcatcaaattagaaaaatgacatgaaaatggacaaaaatac 7983606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 54 - 125
Target Start/End: Original strand, 9632357 - 9632428
Alignment:
Q  54 tataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcattt 125  Q
    |||||||||||||| ||||| |||||||  ||||||||||| |||||||| |  || ||| |||||||||||    
T  9632357 tataggtcatttgaattttcgtccctgaagttactaatccttccattttgtcattgcaaatattaatcattt 9632428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 147 - 202
Target Start/End: Original strand, 25124686 - 25124741
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaatac 202  Q
    |||| |||||||| ||| ||||||||||||||||| |||| ||| |||||||||||    
T  25124686 ttaaccactgccaagtcatcaaattagcaaaatgatatgggaattgacaaaaatac 25124741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 27500391 - 27500332
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    |||||||||| |||||| ||||||||| |||||  ||||| ||||| |||||||||||||    
T  27500391 ttaatcactgtcacgtcatcaaattagaaaaattgcatgggaatgggcaaaaataccctc 27500332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 54 - 125
Target Start/End: Complemental strand, 37343137 - 37343066
Alignment:
Q  54 tataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcattt 125  Q
    |||||||||||||| ||||| |||||||  |||||||| || ||| | |||||||| ||| |||||||||||    
T  37343137 tataggtcatttgaattttcgtccctgaaattactaattcttccaatatgcccctgcaaatattaatcattt 37343066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 37542347 - 37542406
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    |||||||| |||| ||| |||||||| ||||||| ||||| |||| ||||||||||||||    
T  37542347 ttaatcaccgccaagtcatcaaattaacaaaatggcatgggaatgaacaaaaataccctc 37542406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 38003578 - 38003637
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    ||||||||| | | ||| ||||||||||||||||  || |||||||||||||||||||||    
T  38003578 ttaatcactactaagtcatcaaattagcaaaatggtatagaaatggacaaaaataccctc 38003637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 44664811 - 44664752
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    ||||||| ||||| ||| ||| |||||||||||| ||||| |||||||||||||| ||||    
T  44664811 ttaatcattgccaagtcatcagattagcaaaatggcatgggaatggacaaaaatatcctc 44664752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 30 - 100
Target Start/End: Complemental strand, 29575980 - 29575910
Alignment:
Q  30 aaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccatt 100  Q
    ||||||||||||||||| || || |||||  |||||||  |||||||||| |  |||||||||||||||||    
T  29575980 aaatatgcatttcatccctgcaaatatagtccatttgaaatttcatccctaaatttactaatcctcccatt 29575910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 92
Target Start/End: Original strand, 37342976 - 37343042
Alignment:
Q  26 gcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatc 92  Q
    ||||||||| |  |||||||| || || |||||||||||||| |||||||||||||  |||||||||    
T  37342976 gcttaaataggtctttcatccctgcaaatataggtcatttgaattttcatccctgaagttactaatc 37343042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 92
Target Start/End: Complemental strand, 40525697 - 40525631
Alignment:
Q  26 gcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatc 92  Q
    ||||||||| |  |||||||| ||||| |||||||||||||| ||||| |||||||  |||||||||    
T  40525697 gcttaaataggtctttcatccctgtaaatataggtcatttgaattttcgtccctgaagttactaatc 40525631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 92
Target Start/End: Complemental strand, 43866901 - 43866835
Alignment:
Q  26 gcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatc 92  Q
    ||||||||| |  |||||||| || || |||||||||||||| |||||||||||||  |||||||||    
T  43866901 gcttaaataagtctttcatccctgcaaatataggtcatttgaattttcatccctgaagttactaatc 43866835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 125
Target Start/End: Original strand, 547430 - 547530
Alignment:
Q  24 tggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcat 123  Q
    |||||||||||||| |||| ||| || || |||||| ||||| | ||||  |||||||  ||||||||||| ||| | |||||||| ||| |||||||||    
T  547430 tggcttaaatatgc-tttcgtccctgcaaatataggccatttaaatttttgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcat 547528  T
Q  124 tt 125  Q
    ||    
T  547529 tt 547530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 125
Target Start/End: Complemental strand, 23424897 - 23424796
Alignment:
Q  24 tggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcat 123  Q
    |||||||||||||  |||| | | || || |||||| ||||||| ||||| |||||||  ||||||||| | ||| | |||||||| ||| |||||||||    
T  23424897 tggcttaaatatgtctttcgttcctgcaaatataggccatttgaattttcgtccctgaagttactaatcattccaatctgcccctgcaaatattaatcat 23424798  T
Q  124 tt 125  Q
    ||    
T  23424797 tt 23424796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 204
Target Start/End: Original strand, 34176564 - 34176621
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccc 204  Q
    |||||||||| || ||| |||||||||||||||| | ||| || ||||||||||||||    
T  34176564 ttaatcactgtcaggtcatcaaattagcaaaatggcttgggaaaggacaaaaataccc 34176621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 39 - 92
Target Start/End: Original strand, 36623560 - 36623613
Alignment:
Q  39 tttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatc 92  Q
    |||||||| || || |||||||||||||| |||||||||||||  |||||||||    
T  36623560 tttcatccctgcaaatataggtcatttgaattttcatccctgaagttactaatc 36623613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 125
Target Start/End: Complemental strand, 40525868 - 40525791
Alignment:
Q  48 tgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcattt 125  Q
    ||||| ||||||| |||||| ||||| |||||||  ||||||||| | ||| | |||||||| ||| |||||||||||    
T  40525868 tgtaaatataggttatttgaattttcgtccctgaaattactaatcattccaatctgcccctgcaaatattaatcattt 40525791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 125
Target Start/End: Complemental strand, 7777 - 7677
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    |||||||||| |  |||| ||| || || |||||| ||||||| ||||| ||| |||  ||||||||||| ||| | |||||||| ||| ||||||||||    
T  7777 ggcttaaataggtctttcgtccctgcaaatataggccatttgaattttcgtccatgaagttactaatccttccaatatgcccctgcaaatattaatcatt 7678  T
Q  125 t 125  Q
    |    
T  7677 t 7677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 125
Target Start/End: Original strand, 11478145 - 11478245
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    |||||||||| |  |||| ||| || || |||||||||||||| ||||| ||| |||  |||||||||||  || | |||||||| ||| ||||||||||    
T  11478145 ggcttaaataggtttttcgtccctgcaaatataggtcatttgaattttcgtccttgaagttactaatcctttcaatctgcccctgcaaatattaatcatt 11478244  T
Q  125 t 125  Q
    |    
T  11478245 t 11478245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 125
Target Start/End: Original strand, 36623352 - 36623452
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    ||||||||||||  |||| ||| || || |||||| ||||||| ||||| |||||||  |||||||||||  || | ||| |||| ||| ||||||||||    
T  36623352 ggcttaaatatgtttttcgtccctgcaaatataggccatttgaattttcgtccctgaagttactaatcctttcaatctgctcctgcaaatattaatcatt 36623451  T
Q  125 t 125  Q
    |    
T  36623452 t 36623452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 125
Target Start/End: Complemental strand, 41182280 - 41182180
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    ||||||||||||  |||| ||| || || |||| ||||||||| ||||| |||||||  ||||||||| |  || | |||||||| ||| ||||||||||    
T  41182280 ggcttaaatatgtctttcgtccctgcaaatatatgtcatttgaattttcgtccctgaagttactaatcatttcaatctgcccctgcaaatattaatcatt 41182181  T
Q  125 t 125  Q
    |    
T  41182180 t 41182180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 21 - 125
Target Start/End: Complemental strand, 43867099 - 43866995
Alignment:
Q  21 ttttggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaat 120  Q
    ||||||||||||||||  |||| ||| || || |||||  ||||||| ||||| ||| |||  |||||||||||  || | |||||||| ||| ||||||    
T  43867099 ttttggcttaaatatgtttttcgtccctgcaaatatagaccatttgaattttcgtccatgaagttactaatcctttcaatctgcccctgcaaatattaat 43867000  T
Q  121 cattt 125  Q
    |||||    
T  43866999 cattt 43866995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 152; Significance: 3e-80; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 25 - 207
Target Start/End: Complemental strand, 22870562 - 22870379
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22870562 ggcttaaatatgcatttcatccctgtaattataggccatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 22870463  T
Q  125 t-aaatttcgtcccttttcccgattaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctca 207  Q
    | |||||||||| || |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  22870462 taaaatttcgtctctcttcccgattaatcactgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccctca 22870379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 32 - 207
Target Start/End: Original strand, 22869612 - 22869788
Alignment:
Q  32 atatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcattt-aaatt 130  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  22869612 atatgcatttcatccttgtaattataggccatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaaccatttaaaatt 22869711  T
Q  131 tcgtcccttttcccgattaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctca 207  Q
    |||||||| |||||| ||||||||||||||||| |||||||||||||||| ||||  ||||||||||||||||||||    
T  22869712 tcgtccctcttcccggttaatcactgccacgtcatcaaattagcaaaatggcatgagaatggacaaaaataccctca 22869788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 25 - 204
Target Start/End: Original strand, 20856932 - 20857113
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    ||||||||||||| |||||||| |||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  20856932 ggcttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaagttaatcatt 20857031  T
Q  125 t-aaatttcgtcccttttcccgattaatcactgccacgtcctcaaattagc-aaaatgacatggaaatggacaaaaataccc 204  Q
    | ||||||||||||| |||||| ||||||||||||||||| |||||||||| |||||| ||||| ||| |||||||||||||    
T  20857032 tgaaatttcgtccctcttcccggttaatcactgccacgtcatcaaattagcaaaaatggcatgggaattgacaaaaataccc 20857113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 25 - 204
Target Start/End: Complemental strand, 20857647 - 20857466
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    ||||||||||||| ||||||||||||||||||||| | ||||||||||||| ||| |||||||||||||||||||||||||||||||||| |||||||||    
T  20857647 ggcttaaatatgcttttcatccatgtaattataggccgtttgatttttcattcctaagcttactaatcctcccattttgcccctgtaaaagttaatcatt 20857548  T
Q  125 t-aaatttcgtcccttttcccgattaatcactgccacgtcctcaaattagc-aaaatgacatggaaatggacaaaaataccc 204  Q
    | ||||||||||||| |||||| |||||||||||||| || |||||||||| |||||| ||||| ||| |||||||||||||    
T  20857547 tgaaatttcgtccctcttcccggttaatcactgccacctcatcaaattagcaaaaatggcatgggaattgacaaaaataccc 20857466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 25 - 204
Target Start/End: Complemental strand, 20072969 - 20072789
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    ||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||| |||||||||||| |||||||||||||||||  | ||||||||    
T  20072969 ggcttaaatatgcttttcatccctgtaattataggtcgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcatt 20072870  T
Q  125 t-aaatttcgtcccttttcccgattaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccc 204  Q
    | ||| ||||||||| ||||||  |||||||||||||||| |||||||||||||||| ||||| ||| |||||||||||||    
T  20072869 tgaaagttcgtccctcttcccggataatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaataccc 20072789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 21 - 204
Target Start/End: Complemental strand, 39181900 - 39181716
Alignment:
Q  21 ttttggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaat 120  Q
    ||||||||||||||||  ||| |||| |||||||||||||| ||||||||||||||||||| |||||||||||| |||||||||||||||||  | ||||    
T  39181900 ttttggcttaaatatgtttttaatccctgtaattataggtcgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaat 39181801  T
Q  121 cattt-aaatttcgtcccttttcccgattaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccc 204  Q
    ||||| ||| ||||||||| ||||||  |||||||||||||||| |||||||||||||||| ||||| ||| |||||||||||||    
T  39181800 catttgaaagttcgtccctcttcccggataatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaataccc 39181716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 25 - 204
Target Start/End: Original strand, 39181057 - 39181237
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    ||||||||||||| |||||||| |||||||||| | | ||||||||||||||||||| |||||||||||| |||||||||||||||||  | ||||||||    
T  39181057 ggcttaaatatgcttttcatccctgtaattataagccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcatt 39181156  T
Q  125 t-aaatttcgtcccttttcccgattaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccc 204  Q
    | ||| ||||||||| ||||||  |||||||| ||||||| |||||||||||||||| ||||| ||| |||||||||||||    
T  39181157 tgaaagttcgtccctcttcccggataatcactaccacgtcatcaaattagcaaaatggcatgggaattgacaaaaataccc 39181237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 30 - 204
Target Start/End: Complemental strand, 36477471 - 36477296
Alignment:
Q  30 aaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcattt-aaa 128  Q
    |||||||| |||||||| || ||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||||  | ||||||||| |||    
T  36477471 aaatatgcttttcatccctgcaattataggccgtttgatttttcatccatgagcttactaatcctcccattttgcccctgtaattactaatcatttgaaa 36477372  T
Q  129 tttcgtcccttttcccgattaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccc 204  Q
     ||||||||| | ||||  |||||||||||||||| |||||||||||||||| ||||| ||| |||||||||||||    
T  36477371 gttcgtccctctccccggataatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaataccc 36477296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 23 - 204
Target Start/End: Original strand, 20072119 - 20072301
Alignment:
Q  23 ttggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatca 122  Q
    ||||||||||||||| |||||||  |||||||||||| | ||||||||||||||||||| ||||||||||||  ||||||||||||||||  | ||||||    
T  20072119 ttggcttaaatatgcttttcatctctgtaattataggccgtttgatttttcatccctgaacttactaatcctttcattttgcccctgtaattactaatca 20072218  T
Q  123 ttt-aaatttcgtcccttttcccgattaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccc 204  Q
    ||| ||| ||||||||| |||||   |||||||||||||||| |||||||||||||||| ||||| ||| |||||||||||||    
T  20072219 tttgaaagttcgtccctcttcccagataatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaataccc 20072301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 30 - 204
Target Start/End: Original strand, 36476770 - 36476945
Alignment:
Q  30 aaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcattt-aaa 128  Q
    |||||||| |||||||| || ||||||||| | |||||||||||||||||||||||||||||||||||||||||||| |||||  | ||||||||| |||    
T  36476770 aaatatgcttttcatccctgcaattataggccgtttgatttttcatccctgagcttactaatcctcccattttgcccttgtaattactaatcatttgaaa 36476869  T
Q  129 tttcgtcccttttcccgattaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccc 204  Q
     ||||||||| |||||   ||||||||||||| || |||||||||||||||| ||||| ||| |||||||||||||    
T  36476870 gttcgtccctcttcccagataatcactgccacatcatcaaattagcaaaatggcatgggaattgacaaaaataccc 36476945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 24 - 204
Target Start/End: Complemental strand, 16533726 - 16533545
Alignment:
Q  24 tggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcat 123  Q
    |||||||||||||| |||||||| | |||||||||| | |||||||||||||| |||| |||| ||||||| |||||||||||||||||  | |||||||    
T  16533726 tggcttaaatatgcttttcatccctataattataggccgtttgatttttcatctctgaacttattaatccttccattttgcccctgtaattactaatcat 16533627  T
Q  124 tt-aaatttcgtcccttttcccgattaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccc 204  Q
    || ||| ||||||||| ||||||  |||||||||||||||| | |||||||||||||| ||||| ||| |||||||||||||    
T  16533626 ttgaaagttcgtccctcttcccggataatcactgccacgtcattaaattagcaaaatggcatgggaattgacaaaaataccc 16533545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 30 - 204
Target Start/End: Original strand, 16532898 - 16533073
Alignment:
Q  30 aaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcattt-aaa 128  Q
    |||||||| |||||||| |||||||||||| | ||||||||||||||||||| |||| ||||||| |||||||||||||||||  | ||||||||| |||    
T  16532898 aaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttattaatccttccattttgcccctgtaattactaatcatttgaaa 16532997  T
Q  129 tttcgtcccttttcccgattaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccc 204  Q
     ||||||||| ||||||  |||||||||||||||| | |||||||||||||| ||||| |||  ||||||||||||    
T  16532998 gttcgtccctcttcccggataatcactgccacgtcattaaattagcaaaatggcatgggaattcacaaaaataccc 16533073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 25 - 131
Target Start/End: Complemental strand, 14744830 - 14744724
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    |||||||||||||||||||||| || ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||    
T  14744830 ggcttaaatatgcatttcatccctgcaattatatgtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatt 14744731  T
Q  125 taaattt 131  Q
    | |||||    
T  14744730 tgaattt 14744724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 25 - 109
Target Start/End: Original strand, 8654107 - 8654191
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctg 109  Q
    ||||||||||||  |||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  8654107 ggcttaaatatgtttttcatccctgtaattataggtcatttgatttttcatccatgagcttactaatcctcccattttgtccctg 8654191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 25 - 109
Target Start/End: Original strand, 31107931 - 31108015
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctg 109  Q
    |||||||||||||||||||||| || ||||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  31107931 ggcttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttacccctg 31108015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 30 - 125
Target Start/End: Complemental strand, 21978112 - 21978017
Alignment:
Q  30 aaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcattt 125  Q
    |||||||| |||||||| ||||||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||||  | |||||||||    
T  21978112 aaatatgcttttcatccctgtaattatgggccatttgatttttcatccctgagcttactaatcctcccactttgcccctgtaattactaatcattt 21978017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 25 - 125
Target Start/End: Complemental strand, 21979071 - 21978971
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    |||||||||||||||||||||| || ||||||| | |||||||||||||||||  || |||||||||||||| |||||  |||||||||||||||| |||    
T  21979071 ggcttaaatatgcatttcatccctgcaattataagccatttgatttttcatcctcgaacttactaatcctcctattttatccctgtaaaaattaataatt 21978972  T
Q  125 t 125  Q
    |    
T  21978971 t 21978971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 21 - 125
Target Start/End: Original strand, 21972086 - 21972189
Alignment:
Q  21 ttttggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaat 120  Q
    |||||| | |||||||  |||||||| ||||||||| || ||||||||||||||| ||| |||||||||||||||||||||||| |||||||  | ||||    
T  21972086 ttttgggtaaaatatgtttttcatccctgtaattatgggccatttgatttttcat-cctcagcttactaatcctcccattttgctcctgtaattactaat 21972184  T
Q  121 cattt 125  Q
    |||||    
T  21972185 cattt 21972189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 20153221 - 20153162
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    ||||||||||| ||||| |||||||||||||||||||||| |||||||||||||||||||    
T  20153221 ttaatcactgctacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccctc 20153162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 63 - 125
Target Start/End: Complemental strand, 39402210 - 39402148
Alignment:
Q  63 tttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcattt 125  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||| ||| |||||||||||    
T  39402210 tttgatttttcatccctggacttactaatcctcccattttgcccctgcaaatattaatcattt 39402148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 25 - 125
Target Start/End: Original strand, 37944994 - 37945094
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    |||||||||| |  |||| ||| ||||| |||||||||||||| ||||| |||||||  ||||||||||| ||| |||||||||| ||| ||||||||||    
T  37944994 ggcttaaataggtctttcgtccttgtaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatttgcccctgcaaatattaatcatt 37945093  T
Q  125 t 125  Q
    |    
T  37945094 t 37945094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 26 - 125
Target Start/End: Original strand, 25253087 - 25253186
Alignment:
Q  26 gcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcattt 125  Q
    |||||||||||  |||||||| || || ||||| |||||||| ||||| |||||||  ||||||||||| ||| |||||||||| ||| |||||||||||    
T  25253087 gcttaaatatgtctttcatccctgcaaatatagttcatttgaattttcgtccctgaagttactaatccttccaatttgcccctgcaaatattaatcattt 25253186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 26 - 125
Target Start/End: Original strand, 25316877 - 25316976
Alignment:
Q  26 gcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcattt 125  Q
    |||||||||||  |||||||| || || ||||| |||||||| ||||| |||||||  ||||||||||| ||| |||||||||| ||| |||||||||||    
T  25316877 gcttaaatatgtctttcatccctgcaaatatagttcatttgaattttcgtccctgaagttactaatccttccaatttgcccctgcaaatattaatcattt 25316976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 28 - 131
Target Start/End: Complemental strand, 31108434 - 31108332
Alignment:
Q  28 ttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatttaa 127  Q
    ||||||||| ||||||||| || || |||||  ||||||||||||||||| ||| |||||||||| | |||||||  ||||||||| ||||||||||| |    
T  31108434 ttaaatatgtatttcatccctgcaaatataga-catttgatttttcatccatgaacttactaatctttccattttatccctgtaaatattaatcatttta 31108336  T
Q  128 attt 131  Q
    ||||    
T  31108335 attt 31108332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 116 - 207
Target Start/End: Complemental strand, 11741854 - 11741762
Alignment:
Q  116 ttaatcatttaaa-tttcgtcccttttcccgattaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctca 207  Q
    ||||||||||||| |||||||| ||  |||  |||||||||| || ||| |||||||||||||||| ||| | ||||||||||||||||||||    
T  11741854 ttaatcatttaaaatttcgtcctttgacccagttaatcactgtcaggtcatcaaattagcaaaatggcattggaatggacaaaaataccctca 11741762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 25 - 125
Target Start/End: Original strand, 14745448 - 14745548
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    |||||||||| |  |||| ||| || || |||||||||||||| |||||||||||||  ||||||||||| ||| | |||||||| ||| ||||||||||    
T  14745448 ggcttaaataggtctttcgtccctgcaaatataggtcatttgaattttcatccctgaagttactaatccttccaatctgcccctgcaaatattaatcatt 14745547  T
Q  125 t 125  Q
    |    
T  14745548 t 14745548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 25 - 125
Target Start/End: Original strand, 32052224 - 32052324
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    ||||||||||||  |||| ||| ||||| |||||||||||||| ||||| |||||||  ||||||||||| ||| |  ||||||| ||| ||||||||||    
T  32052224 ggcttaaatatgtttttcgtccctgtaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatccgcccctgcaaatattaatcatt 32052323  T
Q  125 t 125  Q
    |    
T  32052324 t 32052324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 25 - 125
Target Start/End: Complemental strand, 32052608 - 32052508
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    ||||||||||||  |||| ||| || || |||||||||||||| ||||| |||||||  ||||||||||| ||| | |||||||| ||| ||||||||||    
T  32052608 ggcttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcatt 32052509  T
Q  125 t 125  Q
    |    
T  32052508 t 32052508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 17544171 - 17544230
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    |||||||||| || ||| |||||||||||||||| ||||| |||||||||||||||||||    
T  17544171 ttaatcactgtcaagtcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 17544230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 17544351 - 17544292
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    |||||||||| || ||| |||||||||||||||| ||||| |||||||||||||||||||    
T  17544351 ttaatcactgtcaagtcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 17544292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 20153041 - 20153100
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    ||||||||| ||| ||| |||||||||||||||| ||||| |||||||||||||||||||    
T  20153041 ttaatcactaccaagtcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 20153100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 22298665 - 22298724
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    ||||||||| ||| ||| |||||||||||||||||||||| ||| |||||||||||||||    
T  22298665 ttaatcactaccaagtcatcaaattagcaaaatgacatgggaattgacaaaaataccctc 22298724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 33871462 - 33871521
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    |||||||| |||| ||| ||||| |||||||||| |||||||||||||||||||||||||    
T  33871462 ttaatcaccgccaagtcatcaaactagcaaaatggcatggaaatggacaaaaataccctc 33871521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 147 - 198
Target Start/End: Complemental strand, 33871641 - 33871590
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaa 198  Q
    ||||||||||| ||||| |||||||||||||||||||||| |||||||||||    
T  33871641 ttaatcactgctacgtcatcaaattagcaaaatgacatgggaatggacaaaa 33871590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 25 - 106
Target Start/End: Complemental strand, 8673858 - 8673777
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgccc 106  Q
    |||| ||||||||||||||||| || || |||||| |||||||  |||||||| ||| ||| ||||| ||||||||||||||    
T  8673858 ggctaaaatatgcatttcatccctgcaaatataggccatttgaaatttcatccttgaacttgctaattctcccattttgccc 8673777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 25 - 125
Target Start/End: Complemental strand, 33735697 - 33735597
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    |||||||||| |  |||| ||| || || |||||||||||||| ||||| |||||||  ||||||||||| ||| | |||||||| ||| ||||||||||    
T  33735697 ggcttaaataggtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcatt 33735598  T
Q  125 t 125  Q
    |    
T  33735597 t 33735597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 54 - 125
Target Start/End: Original strand, 21260894 - 21260965
Alignment:
Q  54 tataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcattt 125  Q
    |||||||||||||| ||||| |||||||  ||||||||||| ||||||||||  || ||| |||||||||||    
T  21260894 tataggtcatttgaattttcgtccctgaagttactaatccttccattttgccattgcaaatattaatcattt 21260965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 23 - 92
Target Start/End: Complemental strand, 18934906 - 18934837
Alignment:
Q  23 ttggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatc 92  Q
    |||||||||||| | ||||| ||| ||||| |||||||||||||| |||||||||| ||  |||||||||    
T  18934906 ttggcttaaataggtatttcgtccctgtaaatataggtcatttgaattttcatcccggaagttactaatc 18934837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 21287960 - 21287904
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaatacc 203  Q
    ||||||||  ||| ||| |||||||||||||||| ||||| ||||||||||||||||    
T  21287960 ttaatcaccaccaagtcatcaaattagcaaaatggcatgggaatggacaaaaatacc 21287904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 25 - 125
Target Start/End: Complemental strand, 25253470 - 25253370
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    ||||||||||||  |||| ||| || || |||||||||||||| ||||| |||||||  ||||||||||| ||| | ||||| || ||| | ||||||||    
T  25253470 ggcttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccttgcaaatactaatcatt 25253371  T
Q  125 t 125  Q
    |    
T  25253370 t 25253370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 25 - 125
Target Start/End: Complemental strand, 25317261 - 25317161
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    ||||||||||||  |||| ||| || || |||||||||||||| ||||| |||||||  ||||||||||| ||| | ||||| || ||| | ||||||||    
T  25317261 ggcttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccttgcaaatactaatcatt 25317162  T
Q  125 t 125  Q
    |    
T  25317161 t 25317161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 25 - 125
Target Start/End: Original strand, 33735313 - 33735413
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    ||||||||||||  |||| ||| |  || |||||| ||||||||||||| |||||||  ||||||||||| ||| | || ||||| ||| ||||||||||    
T  33735313 ggcttaaatatgtctttcgtccctacaaatataggccatttgatttttcgtccctgaaattactaatccttccaatctgtccctgcaaatattaatcatt 33735412  T
Q  125 t 125  Q
    |    
T  33735413 t 33735413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 71
Target Start/End: Complemental strand, 39402779 - 39402736
Alignment:
Q  28 ttaaatatgcatttcatccatgtaattataggtcatttgatttt 71  Q
    |||||||||  ||||||||||| |||||||||||||||||||||    
T  39402779 ttaaatatgtttttcatccatgcaattataggtcatttgatttt 39402736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 39 - 125
Target Start/End: Original strand, 8323070 - 8323156
Alignment:
Q  39 tttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcattt 125  Q
    |||||||| | ||| |||||||||||||| ||||| ||| |||  ||||||||||| ||||||||||  || | | |||||||||||    
T  8323070 tttcatccctataaatataggtcatttgaattttcgtccatgaagttactaatccttccattttgccattgaagatattaatcattt 8323156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 125
Target Start/End: Complemental strand, 12991173 - 12991072
Alignment:
Q  24 tggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcat 123  Q
    |||||||||||||  |||| ||| || || |||| ||||||||| ||||| || ||||  ||||||||||| ||| | | |||||| ||| |||||||||    
T  12991173 tggcttaaatatgtctttcgtccctgcaaatatatgtcatttgaattttcgtctctgaagttactaatccttccaatctacccctgcaaatattaatcat 12991074  T
Q  124 tt 125  Q
    ||    
T  12991073 tt 12991072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 125
Target Start/End: Complemental strand, 13064794 - 13064693
Alignment:
Q  24 tggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcat 123  Q
    |||||||||||||  |||| ||| || || |||| ||||||||| ||||| || || |  ||||||||||| ||| | |||||||| ||| |||||||||    
T  13064794 tggcttaaatatgtctttcgtccctgcaaatatatgtcatttgaattttcgtctctaaagttactaatccttccaatctgcccctgcaaatattaatcat 13064695  T
Q  124 tt 125  Q
    ||    
T  13064694 tt 13064693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 125
Target Start/End: Complemental strand, 18935074 - 18934998
Alignment:
Q  48 tgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcattt 125  Q
    ||||| |||||||||||||||||| | |||||||  ||||||||||| | | |||||| ||| |||| ||||||||||    
T  18935074 tgtaaatataggtcatttgatttt-cgtccctgaaattactaatccttctaatttgccactgcaaaatttaatcattt 18934998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 166 - 206
Target Start/End: Original strand, 30005283 - 30005323
Alignment:
Q  166 caaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    |||||||||||||||| | ||||||||||||| ||||||||    
T  30005283 caaattagcaaaatgatacggaaatggacaaatataccctc 30005323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 141; Significance: 1e-73; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 20 - 207
Target Start/End: Complemental strand, 25624538 - 25624350
Alignment:
Q  20 attttggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaa 119  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  25624538 attttggcttaaatatgcatttcatccctgtaattataggtcatttgatttttcatccctgagcttactaatcctcccatttttcccctgtaaaaattaa 25624439  T
Q  120 tcattt-aaatttcgtcccttttcccgattaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctca 207  Q
    |||||| ||||||||||||| | |||| |||||||||||||| || |||||||| ||||||| ||||| ||||||||||||||||||||    
T  25624438 tcatttaaaatttcgtccctctacccggttaatcactgccacatcatcaaattaacaaaatggcatgggaatggacaaaaataccctca 25624350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 24 - 207
Target Start/End: Original strand, 25623287 - 25623471
Alignment:
Q  24 tggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcat 123  Q
    ||||||||||||||||||||||| | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25623287 tggcttaaatatgcatttcatccctataattataggccatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcat 25623386  T
Q  124 tt-aaatttcgtcccttttcccgattaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctca 207  Q
    || ||||||||||||| | |||| ||||||||||||||||| |||||||| ||||||| ||||| ||||||||||||||||||||    
T  25623387 ttaaaatttcgtccctctacccggttaatcactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctca 25623471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 21 - 204
Target Start/End: Complemental strand, 20983365 - 20983181
Alignment:
Q  21 ttttggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaat 120  Q
    ||||||||||||||||| |||||||| |||||||||||  | ||||||||||||||||||| |||||||||||| |||||||||||||||||  | ||||    
T  20983365 ttttggcttaaatatgcttttcatccctgtaattatagaccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaat 20983266  T
Q  121 cattt-aaatttcgtcccttttcccgattaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccc 204  Q
    ||||| ||| ||||||||| ||||||  |||||||||||||||| |||||||||||||||| ||||| ||| |||||||||||||    
T  20983265 catttgaaagttcgtccctcttcccggataatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaataccc 20983181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 25 - 204
Target Start/End: Original strand, 29957817 - 29957997
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    ||||||||||||| |||||||| |||||||||||| | ||||||||||||||||||| |||||||||||| |||||||||||||||||  | ||||||||    
T  29957817 ggcttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcatt 29957916  T
Q  125 t-aaatttcgtcccttttcccgattaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccc 204  Q
    | ||| ||||||||| |||||| ||||||| ||||||||| |||||||||||||||| ||||| ||| |||||||||||||    
T  29957917 tgaaagttcgtccctcttcccggttaatcattgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaataccc 29957997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 22 - 204
Target Start/End: Complemental strand, 29958650 - 29958467
Alignment:
Q  22 tttggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatc 121  Q
    |||||||||||||||  |||||||| ||||||||||||   ||||||||||||||||||| |||||||||||| ||||||||||||| |||  | |||||    
T  29958650 tttggcttaaatatgtttttcatccctgtaattataggctgtttgatttttcatccctgaacttactaatccttccattttgcccctataattactaatc 29958551  T
Q  122 attt-aaatttcgtcccttttcccgattaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccc 204  Q
    |||| ||| |||||| || |||||| ||||||||||||||||| |||||||||||||||| ||||| ||| |||||||||||||    
T  29958550 atttgaaagttcgtctctcttcccggttaatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaataccc 29958467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 25 - 204
Target Start/End: Original strand, 20982524 - 20982704
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    ||||||||||||| |||||||| |||||||||||| | ||||||||||||||||||| |||||||||||| |||||||||||||||||  | ||||||||    
T  20982524 ggcttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcatt 20982623  T
Q  125 t-aaatttcgtcccttttcccgattaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccc 204  Q
    | ||| ||  ||||| |||  |  |||||||||||||||| ||||||||||||||||  |||| ||| |||||||||||||    
T  20982624 tgaaagttaatccctcttcttggataatcactgccacgtcatcaaattagcaaaatggtatgggaattgacaaaaataccc 20982704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 25 - 125
Target Start/End: Original strand, 24387351 - 24387451
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    |||||||||||||||||||||| || ||||||||| ||||| ||||||||||||||||||||||||||||||||||||| || |||||||||||||||||    
T  24387351 ggcttaaatatgcatttcatccctgcaattataggccatttaatttttcatccctgagcttactaatcctcccattttgtccatgtaaaaattaatcatt 24387450  T
Q  125 t 125  Q
    |    
T  24387451 t 24387451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 25 - 109
Target Start/End: Original strand, 20101770 - 20101854
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctg 109  Q
    ||||||||||||| |||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  20101770 ggcttaaatatgcttttcatccctgtaattataggccatttgatttttcatccctgagcttactaatcctcccattttgcccctg 20101854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 25 - 126
Target Start/End: Complemental strand, 24388356 - 24388255
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    |||||||||||||||||||||| || ||||||| |  ||||||||||||||||||||||||||||||||| ||||||||||  |||||||||||||||||    
T  24388356 ggcttaaatatgcatttcatccctgcaattataagcaatttgatttttcatccctgagcttactaatccttccattttgccattgtaaaaattaatcatt 24388257  T
Q  125 ta 126  Q
    ||    
T  24388256 ta 24388255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 27 - 204
Target Start/End: Original strand, 21103088 - 21103261
Alignment:
Q  27 cttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcattt- 125  Q
    ||||||||||| ||||||||||     |||||| | |||| |||||||||||||| ||||||||||||  |||||| || ||||||  | ||||| ||      
T  21103088 cttaaatatgcttttcatccat-----tataggccgtttggtttttcatccctgaacttactaatcctttcattttaccactgtaattactaatccttcg 21103182  T
Q  126 aaatttcgtcccttttcccgattaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccc 204  Q
    ||| ||||||||| ||||||  |||||||||||||||| |||||||||||||||| ||||| ||| |||||||||||||    
T  21103183 aaagttcgtccctcttcccggataatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaataccc 21103261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 25 - 106
Target Start/End: Complemental strand, 20103244 - 20103163
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgccc 106  Q
    ||||||||||||| ||| |||| |||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  20103244 ggcttaaatatgctttttatccctgtaattataggccattagatttttcatccctgagcttactaatcctcccattttgccc 20103163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 32 - 131
Target Start/End: Complemental strand, 19620886 - 19620787
Alignment:
Q  32 atatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatttaaattt 131  Q
    ||||||||||| ||| |  || ||||||||||||||  |||||||||||| |||||||||||| |||||||||||||| ||| ||||||||||| |||||    
T  19620886 atatgcatttcgtccctacaaatataggtcatttgaaatttcatccctgaacttactaatccttccattttgcccctgcaaatattaatcatttgaattt 19620787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 149 - 206
Target Start/End: Original strand, 11830489 - 11830546
Alignment:
Q  149 aatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    ||||||||||||||| |||||||||||||||| ||||| |||||||||||||||||||    
T  11830489 aatcactgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 11830546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 116 - 207
Target Start/End: Original strand, 6588774 - 6588866
Alignment:
Q  116 ttaatcatttaaa-tttcgtcccttttcccgattaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctca 207  Q
    ||||||||||||| |||||||| ||  |||  || |||||||||| ||| |||||||||||||||| ||||| ||||||||||||||||||||    
T  6588774 ttaatcatttaaaatttcgtcctttgacccagttgatcactgccaggtcatcaaattagcaaaatggcatgggaatggacaaaaataccctca 6588866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 150 - 206
Target Start/End: Complemental strand, 8710768 - 8710712
Alignment:
Q  150 atcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    |||||||||||||| |||||||||||||||| ||||| |||||||||||||||||||    
T  8710768 atcactgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 8710712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 25 - 125
Target Start/End: Original strand, 16366963 - 16367063
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    ||||||||||||  |||| ||| ||||| |||||||||||||| ||||| |||||||  ||||||||||| ||| | |||||||| ||| ||||||||||    
T  16366963 ggcttaaatatgtctttcgtccctgtaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcatt 16367062  T
Q  125 t 125  Q
    |    
T  16367063 t 16367063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 30 - 122
Target Start/End: Original strand, 33881580 - 33881672
Alignment:
Q  30 aaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatca 122  Q
    ||||||||||||||||| ||||| |||||| |||||||  |||||||||| || ||| |||| ||||||||||||| ||| ||| ||||||||    
T  33881580 aaatatgcatttcatccctgtaaatatagggcatttgaaatttcatccctaaggttattaattctcccattttgccactgcaaatattaatca 33881672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 15604642 - 15604583
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    |||||||||||| |||| |||||||||||||||| ||||| |||||||||||||||||||    
T  15604642 ttaatcactgccccgtcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 15604583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 41588361 - 41588302
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    ||||||||||||| ||| |||||||||||||||| ||||||||| |||||||||||||||    
T  41588361 ttaatcactgccaagtcatcaaattagcaaaatggcatggaaattgacaaaaataccctc 41588302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 147 - 204
Target Start/End: Complemental strand, 39936552 - 39936495
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccc 204  Q
    ||||||| ||||||||| |||||||||||||||| |||||||| ||||||||||||||    
T  39936552 ttaatcaatgccacgtcatcaaattagcaaaatggcatggaaaaggacaaaaataccc 39936495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 25 - 128
Target Start/End: Original strand, 17366626 - 17366729
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    |||||||||| |  ||||||||||| || |||||||||||||| ||||| |||||||  ||| ||||||| ||| | |||| ||| ||| ||||||||||    
T  17366626 ggcttaaataggtctttcatccatgcaaatataggtcatttgaattttcttccctgaatttaataatccttccaatctgccactgcaaatattaatcatt 17366725  T
Q  125 taaa 128  Q
    ||||    
T  17366726 taaa 17366729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 24 - 125
Target Start/End: Original strand, 10446831 - 10446932
Alignment:
Q  24 tggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcat 123  Q
    |||||||||||||  |||| ||| || || |||||| ||||||| ||||| |||||||  ||||||||||| ||| | |||||||| ||| |||||||||    
T  10446831 tggcttaaatatgtctttcgtccctgcaaatataggccatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcat 10446930  T
Q  124 tt 125  Q
    ||    
T  10446931 tt 10446932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 43236504 - 43236577
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctccca 98  Q
    |||| |||||||||||| |||| || || |||||| |||||||  |||||||||||| ||||||||||||||||    
T  43236504 ggctaaaatatgcattttatccctgcaaatataggccatttgaaatttcatccctgaacttactaatcctccca 43236577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 25 - 125
Target Start/End: Original strand, 1149937 - 1150037
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    |||||||||| | ||||| ||| || || |||||||||||||| ||||| |||||||  ||||||||||| ||| |  ||||||| ||| ||||||||||    
T  1149937 ggcttaaataggtatttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatcggcccctgcaaatattaatcatt 1150036  T
Q  125 t 125  Q
    |    
T  1150037 t 1150037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 25 - 125
Target Start/End: Complemental strand, 9694126 - 9694026
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    |||||||||| |  |||| |||||| || |||||||||||||| ||||| |||||||  ||||||||||| |||||||| |  || ||| ||||||||||    
T  9694126 ggcttaaataggtctttcgtccatgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccattttgtcattgcaaatattaatcatt 9694027  T
Q  125 t 125  Q
    |    
T  9694026 t 9694026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 147 - 207
Target Start/End: Original strand, 15604462 - 15604522
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctca 207  Q
    ||||||||| ||| ||| | |||||||||||||| ||||| ||||||||||||||||||||    
T  15604462 ttaatcactaccaagtcatgaaattagcaaaatggcatgggaatggacaaaaataccctca 15604522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 25 - 125
Target Start/End: Original strand, 20911130 - 20911230
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    |||||||||| |  |||| ||| || || |||||||||||||| ||||| |||||||  ||||||||||| ||| | |||||||| ||| ||||||||||    
T  20911130 ggcttaaataggtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcatt 20911229  T
Q  125 t 125  Q
    |    
T  20911230 t 20911230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 25 - 125
Target Start/End: Original strand, 32519155 - 32519255
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    ||||||||||||  |||| ||| || || |||||||||||||| ||||| |||||||  ||||||||||| ||| | ||| |||| ||| ||||||||||    
T  32519155 ggcttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaaattactaatccttccaatatgctcctgcaaatattaatcatt 32519254  T
Q  125 t 125  Q
    |    
T  32519255 t 32519255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 41587357 - 41587413
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaatacc 203  Q
    |||||||||| |||||| |||||||||||||||  ||||| ||||||||||||||||    
T  41587357 ttaatcactgtcacgtcatcaaattagcaaaattgcatgggaatggacaaaaatacc 41587413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 8342310 - 8342369
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    ||||||||| ||| ||| |||||||||||||||| ||||| ||| |||||||||||||||    
T  8342310 ttaatcactaccaagtcatcaaattagcaaaatggcatgggaattgacaaaaataccctc 8342369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 165 - 207
Target Start/End: Original strand, 8710609 - 8710651
Alignment:
Q  165 tcaaattagcaaaatgacatggaaatggacaaaaataccctca 207  Q
    |||||||||||||||| ||||| ||||||||||||||||||||    
T  8710609 tcaaattagcaaaatggcatgggaatggacaaaaataccctca 8710651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 25 - 125
Target Start/End: Complemental strand, 1150321 - 1150221
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    ||||||||||||  |||| | | || || |||||||||||||| ||||| |||||||  |||||||||||  || | |||||||| ||| ||||||||||    
T  1150321 ggcttaaatatgtctttcgtgcctgcaaatataggtcatttgaattttcgtccctgaaattactaatcctttcaatctgcccctgcaaatattaatcatt 1150222  T
Q  125 t 125  Q
    |    
T  1150221 t 1150221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 25 - 125
Target Start/End: Complemental strand, 37985111 - 37985011
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    |||| ||||| | ||||| ||| || || |||| ||||||||||||||| || ||||  ||||||||||| ||| |||||| ||| |||| |||||||||    
T  37985111 ggctaaaataagtatttcgtccctgcaaatatatgtcatttgatttttcgtctctgaaattactaatccttccaatttgccactgcaaaatttaatcatt 37985012  T
Q  125 t 125  Q
    |    
T  37985011 t 37985011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 54 - 125
Target Start/End: Complemental strand, 16367318 - 16367247
Alignment:
Q  54 tataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcattt 125  Q
    |||||| ||||||| ||||| |||||||  ||||||||||| ||| | |||||||| ||| |||||||||||    
T  16367318 tataggccatttgaattttcgtccctgaagttactaatccttccaatatgcccctgcaaatattaatcattt 16367247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 22 - 61
Target Start/End: Complemental strand, 21370633 - 21370594
Alignment:
Q  22 tttggcttaaatatgcatttcatccatgtaattataggtc 61  Q
    ||||||||||||||| ||||||||| ||||||||||||||    
T  21370633 tttggcttaaatatgtatttcatccttgtaattataggtc 21370594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 117 - 207
Target Start/End: Original strand, 25230194 - 25230285
Alignment:
Q  117 taatcatttaaa-tttcgtcccttttcccgattaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctca 207  Q
    |||||||||||| ||||||||||   |||  ||||| |||||||| || ||| ||| |||||||| ||||  ||||||||||||||||||||    
T  25230194 taatcatttaaaatttcgtccctgagcccagttaattactgccacatcatcagattggcaaaatggcatgcgaatggacaaaaataccctca 25230285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 105
Target Start/End: Complemental strand, 33882967 - 33882892
Alignment:
Q  30 aaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcc 105  Q
    ||||||||||||||||| || || |||| | |||||||  ||||||   |||| ||||||||||||||||||||||    
T  33882967 aaatatgcatttcatccctgcaaatataaggcatttgaaatttcatatatgaggttactaatcctcccattttgcc 33882892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 83 - 125
Target Start/End: Original strand, 19619584 - 19619626
Alignment:
Q  83 cttactaatcctcccattttgcccctgtaaaaattaatcattt 125  Q
    ||||||||||||||||||||||||||| ||| |||||| ||||    
T  19619584 cttactaatcctcccattttgcccctgcaaatattaattattt 19619626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 98
Target Start/End: Original strand, 7981051 - 7981120
Alignment:
Q  29 taaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctccca 98  Q
    |||| ||||||||  ||| || || ||||||||||||||  ||||||||| || ||||||||||||||||    
T  7981051 taaaaatgcattttctccctgcaactataggtcatttgaaatttcatccccgaacttactaatcctccca 7981120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 7983910 - 7983837
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctccca 98  Q
    |||| ||||||||||||||||   | || ||||||||||||||  |||||||  ||| ||||||||||||||||    
T  7983910 ggctaaaatatgcatttcatctcagcaaatataggtcatttgaaatttcatctatgaacttactaatcctccca 7983837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 83 - 128
Target Start/End: Original strand, 13646138 - 13646183
Alignment:
Q  83 cttactaatcctcccattttgcccctgtaaaaattaatcatttaaa 128  Q
    |||||||||||||||| |||||||||| ||| |||||||| |||||    
T  13646138 cttactaatcctcccaatttgcccctgcaaatattaatcacttaaa 13646183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 83 - 128
Target Start/End: Complemental strand, 13652135 - 13652090
Alignment:
Q  83 cttactaatcctcccattttgcccctgtaaaaattaatcatttaaa 128  Q
    |||||||||||||||| |||||||||| ||| |||||||| |||||    
T  13652135 cttactaatcctcccaatttgcccctgcaaatattaatcacttaaa 13652090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 125
Target Start/End: Original strand, 18476910 - 18477007
Alignment:
Q  28 ttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcattt 125  Q
    ||||||| || |||| ||| || || |||||||||||||| ||||  |||||||  ||||||||||| ||| | |||| ||| |||| ||||||||||    
T  18476910 ttaaataggcctttcgtccctgcaactataggtcatttgaatttttgtccctgaagttactaatccttccaatctgccactgcaaaatttaatcattt 18477007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 43237820 - 43237747
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctccca 98  Q
    |||| ||||||||||||  ||| || || |||||| |||||||  ||| |||||||| ||||||||||||||||    
T  43237820 ggctaaaatatgcattttgtccctgcaaatataggccatttgaaattttatccctgaacttactaatcctccca 43237747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 116 - 203
Target Start/End: Complemental strand, 202693 - 202605
Alignment:
Q  116 ttaatcatttaaa-tttcgtcccttttcccgattaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaatacc 203  Q
    ||||||||||||| ||||||||||   |||  ||||| ||| ||||||  |||||||||||||||| ||||  ||| ||||||||||||    
T  202693 ttaatcatttaaaatttcgtccctacacccacttaattactcccacgttatcaaattagcaaaatggcatgagaatagacaaaaatacc 202605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 88 - 163
Target Start/End: Original strand, 10840539 - 10840615
Alignment:
Q  88 taatcctcccattttgcccctgtaaaaattaatcatttaaa-tttcgtcccttttcccgattaatcactgccacgtc 163  Q
    |||||||  ||||||||| ||  |||| ||||||||||||| |||||||||| |||||  |||||||||| ||||||    
T  10840539 taatcctgacattttgccacttcaaaatttaatcatttaaactttcgtccctcttcccacttaatcactgtcacgtc 10840615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 24 - 92
Target Start/End: Complemental strand, 20911514 - 20911446
Alignment:
Q  24 tggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatc 92  Q
    |||||||||||||  |||| ||| ||||| |||||||||||||| ||||  |||||||  |||||||||    
T  20911514 tggcttaaatatgtctttcgtccctgtaaatataggtcatttgaatttttgtccctgaagttactaatc 20911446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 125
Target Start/End: Complemental strand, 32519539 - 32519439
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    ||||||||||||  |||| ||| || || |||| ||||||||| ||||| | |||||  |||||||||||  || | |||||||| ||| ||||||||||    
T  32519539 ggcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagttactaatcctttcaatctgcccctgcaaatattaatcatt 32519440  T
Q  125 t 125  Q
    |    
T  32519439 t 32519439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 136; Significance: 1e-70; HSPs: 66)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 25 - 207
Target Start/End: Original strand, 13295135 - 13295318
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  13295135 ggcttaaatatgcatttcacccctgtaattataggtcatttgatttttcacccctgagcttactaatccttccattttgcccttgtaaaaattaatcatt 13295234  T
Q  125 t-aaatttcgtcccttttcccgattaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctca 207  Q
    | |||| |||||||| |||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  13295235 taaaatgtcgtccctcttcccggttaatcactgccacgtcatcaaattagcaaaatgacatggaaatagacaaaaataccctca 13295318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 24 - 204
Target Start/End: Original strand, 46282070 - 46282251
Alignment:
Q  24 tggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcat 123  Q
    |||||||||||||  |||||||| |||||||||||||| ||||||||||||||||||| |||||||||||| |||||||||||||||||  | |||||||    
T  46282070 tggcttaaatatgtttttcatccctgtaattataggtcgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcat 46282169  T
Q  124 tt-aaatttcgtcccttttcccgattaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccc 204  Q
    || ||| ||||||||| ||||||  |||||||||||||||| |||||||||||||||| ||||| ||| |||||||||||||    
T  46282170 ttgaaagttcgtccctcttcccggataatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaataccc 46282251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 25 - 204
Target Start/End: Original strand, 49093041 - 49093221
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    |||||||| |||| |||||||| |||||||||||| | ||||||||||||||||||| |||||||||||| ||||||||||| |||||  | ||||||||    
T  49093041 ggcttaaacatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcccatgtaattactaatcatt 49093140  T
Q  125 t-aaatttcgtcccttttcccgattaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccc 204  Q
    | ||| ||||||||| ||||||  |||||||||||||||| |||||||||||||||| ||||| ||| |||||||||||||    
T  49093141 tgaaagttcgtccctcttcccggataatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaataccc 49093221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 30 - 204
Target Start/End: Complemental strand, 46282888 - 46282713
Alignment:
Q  30 aaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcattt-aaa 128  Q
    |||||||| |||||||| |||||||||||| | ||||||||||||||||||| |||||||||||| |||||||||||||||||  | ||||||||| |||    
T  46282888 aaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcatttgaaa 46282789  T
Q  129 tttcgtcccttttcccgattaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccc 204  Q
     ||||||||| ||||||  ||||||||||||| || |||||||||||||||| ||||| ||| |||||||||||||    
T  46282788 gttcgtccctcttcccggataatcactgccacatcatcaaattagcaaaatggcatgggaattgacaaaaataccc 46282713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 30 - 204
Target Start/End: Complemental strand, 50063043 - 50062868
Alignment:
Q  30 aaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcattt-aaa 128  Q
    |||||||| |||||||| |||||||||||| | ||||||||||||||||||| |||||||||||| |||||||||| ||||||  | ||||||||| |||    
T  50063043 aaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcctctgtaattactaatcatttgaaa 50062944  T
Q  129 tttcgtcccttttcccgattaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccc 204  Q
     ||||||||| ||||||  ||||||||| |||||| |||||||||||||||| ||||  ||| |||||||||||||    
T  50062943 gttcgtccctcttcccggataatcactgtcacgtcatcaaattagcaaaatggcatgagaattgacaaaaataccc 50062868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 63 - 204
Target Start/End: Complemental strand, 49093875 - 49093733
Alignment:
Q  63 tttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcattt-aaatttcgtcccttttcccgattaatcactgccacg 161  Q
    ||||||||||||||||||| |||||||||||| |||||||||||||||||  | ||||||||| ||| ||||||||| ||||||  ||||||||||||||    
T  49093875 tttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcatttgaaagttcgtccctcttcccggataatcactgccacg 49093776  T
Q  162 tcctcaaattagcaaaatgacatggaaatggacaaaaataccc 204  Q
    || |||||||||||||||| ||||| ||| |||||||||||||    
T  49093775 tcatcaaattagcaaaatggcatgggaattgacaaaaataccc 49093733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 28 - 160
Target Start/End: Complemental strand, 25066055 - 25065922
Alignment:
Q  28 ttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatttaa 127  Q
    ||||||||||||||||||| | |||||||| | |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  25066055 ttaaatatgcatttcatccctataattataagccatttgatttttcatccctgagcttactaatccttccattttacccctgtaaaaattaatcatttaa 25065956  T
Q  128 -atttcgtcccttttcccgattaatcactgccac 160  Q
     ||||||||||| |  ||  ||||||||||||||    
T  25065955 gatttcgtccctctctccacttaatcactgccac 25065922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 68 - 204
Target Start/End: Original strand, 50062246 - 50062383
Alignment:
Q  68 tttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcattt-aaatttcgtcccttttcccgattaatcactgccacgtcctc 166  Q
    |||||||||||||| |||||||||||| ||||||||| |||||||  | ||||||||| ||| ||||||||| ||||||  |||||||||||||||| ||    
T  50062246 tttttcatccctgaacttactaatccttccattttgctcctgtaattactaatcatttgaaagttcgtccctcttcccggataatcactgccacgtcatc 50062345  T
Q  167 aaattagcaaaatgacatggaaatggacaaaaataccc 204  Q
    |||||||||||||||||||| ||| |||||||||||||    
T  50062346 aaattagcaaaatgacatgggaattgacaaaaataccc 50062383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 28 - 163
Target Start/End: Original strand, 25064936 - 25065072
Alignment:
Q  28 ttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatttaa 127  Q
    ||||||||||||||||||| || |||||||||| |||||||||||||||||||| |||||||||||||||||| || |||| ||||||||||||||||||    
T  25064936 ttaaatatgcatttcatccctgcaattataggtaatttgatttttcatccctgatcttactaatcctcccattctgtccctataaaaattaatcatttaa 25065035  T
Q  128 -atttcgtcccttttcccgattaatcactgccacgtc 163  Q
     ||||||||||| | | |  || ||||||||||||||    
T  25065036 gatttcgtccctctcctcacttgatcactgccacgtc 25065072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 21 - 109
Target Start/End: Complemental strand, 51935303 - 51935215
Alignment:
Q  21 ttttggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctg 109  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  51935303 ttttggcttaaatatgcttttcatccatgtaattatatgtcatttgatttttcatccctgagctttctaatcctcccattttgcccctg 51935215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 30 - 125
Target Start/End: Original strand, 32619389 - 32619484
Alignment:
Q  30 aaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcattt 125  Q
    |||||||| |||||||| ||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||  | |||||||||    
T  32619389 aaatatgcttttcatccctgtaattatgggccatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaattactaatcattt 32619484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 30 - 112
Target Start/End: Complemental strand, 32622451 - 32622369
Alignment:
Q  30 aaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaa 112  Q
    |||||||  |||||||| ||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32622451 aaatatgtttttcatccctgtaattatgggccatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaa 32622369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 25 - 131
Target Start/End: Original strand, 2828193 - 2828299
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    |||||||||||||||||||||| || |||||||| |||||||||||||||||| | | |||||||||||| | |||||||| ||| ||| ||||||||||    
T  2828193 ggcttaaatatgcatttcatccttgcaattatagatcatttgatttttcatccataaacttactaatccttctattttgcctctgcaaatattaatcatt 2828292  T
Q  125 taaattt 131  Q
    | |||||    
T  2828293 tgaattt 2828299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 25 - 97
Target Start/End: Complemental strand, 13295680 - 13295608
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctccc 97  Q
    |||||||||||||||||||||| |||||||||||| |||||||||||||||| ||||||||||||| ||||||    
T  13295680 ggcttaaatatgcatttcatccctgtaattataggccatttgatttttcatctctgagcttactaaccctccc 13295608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 25 - 128
Target Start/End: Complemental strand, 6345737 - 6345634
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    |||| ||||||||||||||||| || |||||  ||||||||||  |||||||||||| |||||||||||| |||||||||||||| ||| ||||| ||||    
T  6345737 ggctaaaatatgcatttcatccctgcaattaggggtcatttgaaatttcatccctgaacttactaatccttccattttgcccctgcaaatattaagcatt 6345638  T
Q  125 taaa 128  Q
    ||||    
T  6345637 taaa 6345634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 26 - 131
Target Start/End: Complemental strand, 2829645 - 2829533
Alignment:
Q  26 gcttaaatatgcatttcatccatgtaattataggtcatttgat-------ttttcatccctgagcttactaatcctcccattttgcccctgtaaaaatta 118  Q
    ||||||||||||||||||||| |  ||||||||||||||||||       ||||||||| |||||||||||||||||||||||| |||||| ||| ||||    
T  2829645 gcttaaatatgcatttcatccctacaattataggtcatttgatatttgatttttcatccttgagcttactaatcctcccattttacccctgcaaatatta 2829546  T
Q  119 atcatttaaattt 131  Q
    ||||||| |||||    
T  2829545 atcatttgaattt 2829533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 30 - 125
Target Start/End: Original strand, 6344260 - 6344355
Alignment:
Q  30 aaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcattt 125  Q
    ||||||||||||||||| ||||||||  ||||||||||  |||||||| ||| |||||||||||||||||||||||| || ||| ||||| |||||    
T  6344260 aaatatgcatttcatccctgtaattaggggtcatttgaaatttcatccatgaacttactaatcctcccattttgcccttgcaaatattaaacattt 6344355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 28324927 - 28324986
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  28324927 ttaatcactgccacgtcatcaaattagcaaaatggcatggaaatggacaaaaataccctc 28324986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 116 - 219
Target Start/End: Original strand, 5734100 - 5734204
Alignment:
Q  116 ttaatcatttaaa-tttcgtcccttttcccgattaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctcaaattaat 214  Q
    ||||||||||||| ||| ||||||   |||| ||||| |||| |||||| |||||||| ||||||| ||||| |||||||||||||||||||||||| ||    
T  5734100 ttaatcatttaaaattttgtccctgcacccgtttaattactgtcacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctcaaattcat 5734199  T
Q  215 cttct 219  Q
    |||||    
T  5734200 cttct 5734204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 25 - 113
Target Start/End: Original strand, 32238699 - 32238787
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaa 113  Q
    |||| ||||||||||||||||| || || ||||||  ||||||  |||||||||||| ||||||||||||||||||||||| |||||||    
T  32238699 ggctaaaatatgcatttcatccctgcaaatataggctatttgaaatttcatccctgaacttactaatcctcccattttgcctctgtaaa 32238787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 7371413 - 7371472
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    ||||||||||||||||| |||||||||||||||| ||||| |||||||||||||||||||    
T  7371413 ttaatcactgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 7371472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 31058360 - 31058301
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    ||||||||||||||||| |||||||||||||||| ||||| |||||||||||||||||||    
T  31058360 ttaatcactgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 31058301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 40714567 - 40714626
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    ||||||||||||||||| |||||||||||||||| ||||| |||||||||||||||||||    
T  40714567 ttaatcactgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 40714626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 25 - 125
Target Start/End: Complemental strand, 1047588 - 1047488
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    ||||||||||||  |||||||| ||||| |||||||||||||| ||||| || ||||  ||||||||||| ||| | |||||||| ||| ||||||||||    
T  1047588 ggcttaaatatgtctttcatccctgtaaatataggtcatttgaattttcgtctctgaagttactaatccttccaatctgcccctgcaaatattaatcatt 1047489  T
Q  125 t 125  Q
    |    
T  1047488 t 1047488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 22 - 125
Target Start/End: Complemental strand, 2953851 - 2953748
Alignment:
Q  22 tttggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatc 121  Q
    |||||||||||||||  |||| ||| || || |||||||||||||| ||||| |||||||  ||||||||||| ||| | |||||||| ||| |||||||    
T  2953851 tttggcttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatc 2953752  T
Q  122 attt 125  Q
    ||||    
T  2953751 attt 2953748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 8898640 - 8898699
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    |||||||||| |||||| |||||||||||||||| ||||| |||||||||||||||||||    
T  8898640 ttaatcactgtcacgtcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 8898699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 49955470 - 49955529
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    |||||||||||||| || |||||||||||||||| ||||| |||||||||||||||||||    
T  49955470 ttaatcactgccacatcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 49955529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 149 - 207
Target Start/End: Original strand, 35038580 - 35038638
Alignment:
Q  149 aatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctca 207  Q
    ||||||||||||||| |||||||||||||||| ||||| |||||||||||||| |||||    
T  35038580 aatcactgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaatatcctca 35038638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 147 - 201
Target Start/End: Complemental strand, 45750145 - 45750091
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaata 201  Q
    ||||||||||||||||| |||||||||||||||| ||||| ||||||||||||||    
T  45750145 ttaatcactgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaata 45750091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 126 - 207
Target Start/End: Original strand, 32132406 - 32132487
Alignment:
Q  126 aaatttcgtcccttttcccgattaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctca 207  Q
    |||||||||||||   |||  ||||| ||||||||||| |||||||||||||||| ||||| |||||||||||||| |||||    
T  32132406 aaatttcgtccctacacccacttaattactgccacgtcatcaaattagcaaaatgtcatgggaatggacaaaaataacctca 32132487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 25 - 122
Target Start/End: Original strand, 52563651 - 52563748
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatca 122  Q
    |||| ||||||||||||||||| || || ||||||  |||||   |||||||| |||| |||||||||||||||||||||| ||| ||| ||||||||    
T  52563651 ggctaaaatatgcatttcatccctgcaaatatagggtatttggaatttcatccttgaggttactaatcctcccattttgccactgcaaatattaatca 52563748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 8898820 - 8898761
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    ||||||||| ||| ||| ||||||||||||||||||| || |||||||||||||||||||    
T  8898820 ttaatcactaccaagtcatcaaattagcaaaatgacacgggaatggacaaaaataccctc 8898761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 54 - 125
Target Start/End: Complemental strand, 10019728 - 10019657
Alignment:
Q  54 tataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcattt 125  Q
    |||||||||||||| |||||||||||||  ||||||||||| ||||||||||  || ||| |||||||||||    
T  10019728 tataggtcatttgaattttcatccctgaagttactaatccttccattttgccattgcaaatattaatcattt 10019657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 17189077 - 17189136
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    ||||||||| ||| ||| |||||||||||||||| ||||| |||||||||||||||||||    
T  17189077 ttaatcactaccaagtcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 17189136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 25 - 131
Target Start/End: Complemental strand, 28534896 - 28534790
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaatt-aatcat 123  Q
    |||||||||||||||||| | | ||||| |||||| |||||||  |||||||||||| |||||||||||| ||||||| || ||| ||| ||| ||||||    
T  28534896 ggcttaaatatgcatttcgttc-tgtaaatatagggcatttgaaatttcatccctgaacttactaatccttccattttacctctgcaaatattaaatcat 28534798  T
Q  124 ttaaattt 131  Q
    || |||||    
T  28534797 ttgaattt 28534790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 35040917 - 35040858
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    ||||||||| ||| ||| |||||||||||||||| ||||| |||||||||||||||||||    
T  35040917 ttaatcactaccaagtcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 35040858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 22 - 125
Target Start/End: Complemental strand, 46850045 - 46849942
Alignment:
Q  22 tttggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatc 121  Q
    ||||||||||||| |  |||| ||| || || |||||||||||||| ||||| |||||||  ||||| ||||| ||| |||||||||| ||| |||||||    
T  46850045 tttggcttaaataggtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactgatccttccaatttgcccctgcaaatattaatc 46849946  T
Q  122 attt 125  Q
    ||||    
T  46849945 attt 46849942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 49955650 - 49955591
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    |||||||| |||| ||| |||||||||||||||| ||||| |||||||||||||||||||    
T  49955650 ttaatcaccgccaagtcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 49955591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 147 - 201
Target Start/End: Original strand, 30326619 - 30326673
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaata 201  Q
    ||||||||| ||| ||| |||||||||||||||||||||| ||||||||||||||    
T  30326619 ttaatcactaccaagtcatcaaattagcaaaatgacatgggaatggacaaaaata 30326673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 43 - 125
Target Start/End: Complemental strand, 46545097 - 46545015
Alignment:
Q  43 atccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcattt 125  Q
    |||| ||||| ||||||||||||||  |||| |||||||  ||||||||||| |||||||||| ||| ||| |||||||||||    
T  46545097 atccctgtaaatataggtcatttgaagtttcgtccctgaagttactaatccttccattttgccactgcaaatattaatcattt 46545015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 24 - 125
Target Start/End: Original strand, 2953463 - 2953564
Alignment:
Q  24 tggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcat 123  Q
    |||||||||||||  |||| ||| ||||| |||||||||||||| ||||| ||||| |  |||||||||||  || | |||||||| ||| |||||||||    
T  2953463 tggcttaaatatgtctttcgtccctgtaaatataggtcatttgaattttcgtccctaaagttactaatcctttcaatctgcccctgcaaatattaatcat 2953562  T
Q  124 tt 125  Q
    ||    
T  2953563 tt 2953564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 25 - 125
Target Start/End: Complemental strand, 19755789 - 19755689
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    |||||||||| |  |||| ||| || || |||||||||||||| |||| ||||||||  ||||||||||| ||| | |||||||| ||| ||||||||||    
T  19755789 ggcttaaataggtctttcgtccctgcaaatataggtcatttgaatttttatccctgaagttactaatccttccaatctgcccctgcaaatattaatcatt 19755690  T
Q  125 t 125  Q
    |    
T  19755689 t 19755689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 20760808 - 20760752
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaatacc 203  Q
    ||||||||| |||  || |||||||||||||||||||||| ||||||||||||||||    
T  20760808 ttaatcactaccaaatcatcaaattagcaaaatgacatgggaatggacaaaaatacc 20760752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 54 - 125
Target Start/End: Original strand, 5926548 - 5926619
Alignment:
Q  54 tataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcattt 125  Q
    |||||||||||||| ||||| |||||||  ||||||||||| ||| | |||||||| ||| |||||||||||    
T  5926548 tataggtcatttgaattttcgtccctgaagttactaatccttccaatatgcccctgcaaacattaatcattt 5926619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 54 - 125
Target Start/End: Complemental strand, 29980993 - 29980922
Alignment:
Q  54 tataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcattt 125  Q
    |||||||||||||| ||||| |||| ||  ||||||||||| ||| |||||||||| ||| |||||||||||    
T  29980993 tataggtcatttgaattttcgtcccggaagttactaatccttccaatttgcccctgcaaatattaatcattt 29980922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 40714746 - 40714688
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    ||||||||| ||| ||| |||||||||||||||| ||||| |||||||||||||||||||    
T  40714746 ttaatcactaccaagtcatcaaattagcaaaatggcatgg-aatggacaaaaataccctc 40714688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 45749965 - 45750024
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    ||||||||| ||| ||| |||||||||||||||| ||||  |||||||||||||||||||    
T  45749965 ttaatcactaccaagtcatcaaattagcaaaatggcatgagaatggacaaaaataccctc 45750024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 28 - 125
Target Start/End: Original strand, 49002879 - 49002976
Alignment:
Q  28 ttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcattt 125  Q
    |||||||||  |||| ||| || || |||||||||||||| ||||| ||| |||  ||||||||||| ||| | |||||||| ||| |||||||||||    
T  49002879 ttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccatgaagttactaatccttccaatctgcccctgcaaatattaatcattt 49002976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 21 - 125
Target Start/End: Complemental strand, 5183894 - 5183790
Alignment:
Q  21 ttttggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaat 120  Q
    |||||||||||||| |  |||  ||| || || |||||| ||||||| ||||| |||||||  |||| |||||| ||| |||||||||| ||| ||||||    
T  5183894 ttttggcttaaatacgtcttttgtccctgcaaatataggccatttgaattttcgtccctgaagttacgaatccttccaatttgcccctgcaaatattaat 5183795  T
Q  121 cattt 125  Q
    |||||    
T  5183794 cattt 5183790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 25 - 125
Target Start/End: Original strand, 48380681 - 48380781
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    |||||||||| |  |||| ||| ||||| |||||||||||||| ||||| || ||||  ||||||||||| ||| | ||||  || ||||||||||||||    
T  48380681 ggcttaaataggtctttcgtccttgtaaatataggtcatttgaattttcgtcgctgaagttactaatccttccaatctgccagtgcaaaaattaatcatt 48380780  T
Q  125 t 125  Q
    |    
T  48380781 t 48380781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 12905962 - 12905903
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    |||||||||| || ||| |||||||| ||||||| ||||  |||||||||||||||||||    
T  12905962 ttaatcactgtcaagtcatcaaattaacaaaatggcatgagaatggacaaaaataccctc 12905903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 28325107 - 28325048
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    |||||||||  || ||| |||||||||||||||||||| | |||||||||||||| ||||    
T  28325107 ttaatcactatcaagtcatcaaattagcaaaatgacataggaatggacaaaaatatcctc 28325048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 115 - 205
Target Start/End: Original strand, 46899151 - 46899242
Alignment:
Q  115 attaatcatttaaa-tttcgtcccttttcccgattaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccct 205  Q
    |||||||||||||| ||||||||||   |||  ||||| |||||||| || |||||| | ||||||| ||||| ||||||||||||| ||||    
T  46899151 attaatcatttaaaatttcgtccctgagcccagttaattactgccacatcatcaaataaacaaaatggcatgggaatggacaaaaatgccct 46899242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 92
Target Start/End: Complemental strand, 29042945 - 29042879
Alignment:
Q  26 gcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatc 92  Q
    ||||||||| |  |||||||| || || |||||||||||||| |||||||||||||  |||||||||    
T  29042945 gcttaaataggtctttcatccttgcaaatataggtcatttgaattttcatccctgaagttactaatc 29042879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 23 - 125
Target Start/End: Complemental strand, 29043141 - 29043039
Alignment:
Q  23 ttggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatca 122  Q
    ||||||||||||||  |||| ||  || || |||||| ||||||| ||||| |||||||  |||||||||||  || | |||||||| ||| ||||||||    
T  29043141 ttggcttaaatatgtctttcgtctctgcaaatataggccatttgaattttcgtccctgaagttactaatcctttcaatctgcccctgcaaatattaatca 29043042  T
Q  123 ttt 125  Q
    |||    
T  29043041 ttt 29043039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 201
Target Start/End: Original strand, 37929541 - 37929595
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaata 201  Q
    ||||||||||  ||||| |||||||||||||||| ||||  ||||||||||||||    
T  37929541 ttaatcactgtaacgtcatcaaattagcaaaatggcatgagaatggacaaaaata 37929595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 127
Target Start/End: Original strand, 24701299 - 24701372
Alignment:
Q  54 tataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatttaa 127  Q
    ||||| |||||||| ||||| |||||||  ||||||||||| ||| | |||| ||| |||| ||||||||||||    
T  24701299 tatagctcatttgaattttcgtccctgaagttactaatccttccaatctgccactgcaaaatttaatcatttaa 24701372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 125
Target Start/End: Original strand, 29980642 - 29980739
Alignment:
Q  28 ttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcattt 125  Q
    |||||||||  |||| ||| ||||| |||||||||||||| |||||  || |||  ||||||||| | ||| | |||||||| ||| |||||||||||    
T  29980642 ttaaatatgtctttcgtccttgtaaatataggtcatttgaattttcgcccatgaagttactaatctttccaatctgcccctgcaaatattaatcattt 29980739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 125
Target Start/End: Original strand, 1040298 - 1040398
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    ||||||||||||  |||| ||| || || |||| | ||||||| ||||  |||||||  ||||||||||| ||| | |||||||| ||| ||||||||||    
T  1040298 ggcttaaatatgtctttcgtccttgcaaatataagccatttgaatttttgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcatt 1040397  T
Q  125 t 125  Q
    |    
T  1040398 t 1040398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 125
Target Start/End: Original strand, 1047204 - 1047304
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    ||||||||||||  |||| ||| || || |||| | ||||||| ||||  |||||||  ||||||||||| ||| | |||||||| ||| ||||||||||    
T  1047204 ggcttaaatatgtctttcgtccttgcaaatataagccatttgaatttttgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcatt 1047303  T
Q  125 t 125  Q
    |    
T  1047304 t 1047304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 116 - 163
Target Start/End: Original strand, 4960631 - 4960679
Alignment:
Q  116 ttaatcatttaaa-tttcgtcccttttcccgattaatcactgccacgtc 163  Q
    ||||||||||||| |||||||||| |||||  |||||||||||||||||    
T  4960631 ttaatcatttaaaatttcgtccctcttcccacttaatcactgccacgtc 4960679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 125
Target Start/End: Original strand, 6056376 - 6056476
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    ||||||||||||  |||| ||| || || |||||||||||||| ||||| ||||| |  ||||| ||||| ||| | || ||||| ||| ||||||||||    
T  6056376 ggcttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctaaaattactgatccttccaatatgtccctgcaaatattaatcatt 6056475  T
Q  125 t 125  Q
    |    
T  6056476 t 6056476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 116 - 163
Target Start/End: Complemental strand, 17662187 - 17662139
Alignment:
Q  116 ttaatcatttaaa-tttcgtcccttttcccgattaatcactgccacgtc 163  Q
    ||||||||||||| |||||||||| |||||  |||||||||||||||||    
T  17662187 ttaatcatttaaaatttcgtccctcttcccacttaatcactgccacgtc 17662139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 105
Target Start/End: Complemental strand, 24701653 - 24701573
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcc 105  Q
    |||||||||| |  |||||||| || || |||| | ||||||| ||||| |||||||  ||||||||||| ||||||||||    
T  24701653 ggcttaaataggtctttcatccctgcaaatataagccatttgaattttcgtccctgaagttactaatccttccattttgcc 24701573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 125
Target Start/End: Original strand, 25414844 - 25414944
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    ||||||||||||  |||| ||| |  || |||||| ||||||| ||||| || ||||  ||||||||||| ||| | |||||||| ||| ||||||||||    
T  25414844 ggcttaaatatgtctttcgtccctacaaatataggccatttgaattttcttctctgaagttactaatccttccaatctgcccctgcaaatattaatcatt 25414943  T
Q  125 t 125  Q
    |    
T  25414944 t 25414944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 125
Target Start/End: Complemental strand, 49003259 - 49003159
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    |||||||||| |  |||| ||| || || |||||||||||||| ||||| ||| |||  ||||||||||| ||| | |||| ||| ||| ||||||||||    
T  49003259 ggcttaaataggtctttcgtccctgcaaatataggtcatttgaattttcgtccatgaagttactaatccttccaatctgcctctgcaaatattaatcatt 49003160  T
Q  125 t 125  Q
    |    
T  49003159 t 49003159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 132; Significance: 2e-68; HSPs: 67)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 25 - 219
Target Start/End: Original strand, 12643100 - 12643295
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    |||||||||||||||||||||| |||||||||||| |||||||||||||||| ||||||||||||||||||||||||| |||||| ||||||||| ||||    
T  12643100 ggcttaaatatgcatttcatccctgtaattataggccatttgatttttcatctctgagcttactaatcctcccattttacccctgcaaaaattaaccatt 12643199  T
Q  125 t-aaatttcgtcccttttcccgattaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctcaaattaatcttct 219  Q
    | ||||||||||||| |||||||||||||||||||||||| ||||||||||  |||| ||| | |||||||||||||||||||||||| |||||||    
T  12643200 taaaatttcgtccctcttcccgattaatcactgccacgtcatcaaattagcttaatggcataggaatggacaaaaataccctcaaattcatcttct 12643295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 25 - 207
Target Start/End: Original strand, 4226125 - 4226308
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    |||||||||||||||||||||| |||||||||||| ||||||||| |||| || |||||||||||||||| |||||||||||||||||||||||||||||    
T  4226125 ggcttaaatatgcatttcatccctgtaattataggccatttgattcttcaaccatgagcttactaatccttccattttgcccctgtaaaaattaatcatt 4226224  T
Q  125 t-aaatttcgtcccttttcccgattaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctca 207  Q
    | ||||||||||| | |||||| ||||||||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||    
T  4226225 taaaatttcgtccttcttcccggttaatcactgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaataccctca 4226308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 25 - 207
Target Start/End: Original strand, 45914526 - 45914707
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    |||||||||||||||||||||  |||||||||||| ||||||||||||||||||| |||||||||||| || |||||||||| |||||||||||||||||    
T  45914526 ggcttaaatatgcatttcatctctgtaattataggccatttgatttttcatccctaagcttactaatc-tctcattttgccc-tgtaaaaattaatcatt 45914623  T
Q  125 taaa-tttcgtcccttttcccgattaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctca 207  Q
    |||| |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  45914624 taaaatttcgtccctcttcccgattaatcactgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccctca 45914707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 25 - 207
Target Start/End: Original strand, 47558030 - 47558213
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    |||||||||||||||||||||  | ||||||||||  ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  47558030 ggcttaaatatgcatttcatctctttaattataggctatttgatttttcatccctgagtttactaatcctcccattttgcccctgtaaaaattaaccatt 47558129  T
Q  125 t-aaatttcgtcccttttcccgattaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctca 207  Q
    | ||||||||||||| ||||||||||||||||| |||||| |||||||||||||||| ||||| |||||| |||||||||||||    
T  47558130 taaaatttcgtccctcttcccgattaatcactgtcacgtcatcaaattagcaaaatgtcatgggaatggataaaaataccctca 47558213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 26 - 207
Target Start/End: Complemental strand, 12644232 - 12644050
Alignment:
Q  26 gcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcattt 125  Q
    ||||||||||||||||||||| | |||||| ||| |||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||    
T  12644232 gcttaaatatgcatttcatccctataattacaggccatttgatttttcatccctgagcttactaatcctcccattttactcctgtaaaaattaatcattt 12644133  T
Q  126 -aaatttcgtcccttttcccgattaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctca 207  Q
     ||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| ||||  |||| |||||||| ||||||    
T  12644132 aaaatttcgtccctcttcccggttaatcactgccacgtcatcaaattagcaaaatggcatgagaatgaacaaaaatgccctca 12644050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 25 - 203
Target Start/End: Complemental strand, 4227272 - 4227093
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| ||||    
T  4227272 ggcttaaatatgcatttcatccctgtaattataggccatttgatttttcatccttgagcttactaatcctcccattttgtccctgtaaaaattaaccatt 4227173  T
Q  125 t-aaatttcgtcccttttcccgattaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaatacc 203  Q
    | ||||||||||||| || ||| |||||||||||||| || | |||||||||||||| ||||  ||||||||||||||||    
T  4227172 taaaatttcgtccctctttccggttaatcactgccacatcataaaattagcaaaatggcatgagaatggacaaaaatacc 4227093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 25 - 163
Target Start/End: Complemental strand, 45915908 - 45915769
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||||||||| |||||||||||||||| ||||| |||||||||||||||||||||    
T  45915908 ggcttaaatatgcatttcatccctgtaattataggccatttgatttttcatccctaagcttactaatcctcctattttacccctgtaaaaattaatcatt 45915809  T
Q  125 t-aaatttcgtcccttttcccgattaatcactgccacgtc 163  Q
    | ||||| ||||||| || |||||||||||||||||||||    
T  45915808 taaaattccgtccctctttccgattaatcactgccacgtc 45915769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 25 - 204
Target Start/End: Original strand, 27479987 - 27480167
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    ||||||||||||| |||||||| || ||||||||| |  ||||||||||||||||||||||||||||||||| |||||||||||||||  | ||||||||    
T  27479987 ggcttaaatatgcttttcatccctgcaattataggccgcttgatttttcatccctgagcttactaatcctcctattttgcccctgtaattactaatcatt 27480086  T
Q  125 t-aaatttcgtcccttttcccgattaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccc 204  Q
    | ||| ||||||||| |||||   |||||||||||||||| |||||||||||||||| ||||| ||| |||||||||||||    
T  27480087 tgaaagttcgtccctcttcccagataatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaataccc 27480167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 30 - 204
Target Start/End: Original strand, 22661362 - 22661537
Alignment:
Q  30 aaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcattt-aaa 128  Q
    |||||||| |||||||| |||||||||||| | ||||||||||||||| ||| |||||||||||| |||||||||||||||||  | ||||||||| |||    
T  22661362 aaatatgcttttcatccctgtaattataggccgtttgatttttcatccttgaacttactaatccttccattttgcccctgtaattactaatcatttgaaa 22661461  T
Q  129 tttcgtcccttttcccgattaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccc 204  Q
     ||||||||| ||||||  |||||||||||||||| |||||||||||||||| ||||| ||| |||||||||||||    
T  22661462 gttcgtccctcttcccggataatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaataccc 22661537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 25 - 204
Target Start/End: Complemental strand, 27480847 - 27480667
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    ||||||||||||  |||||||| |||||||||||| | ||||||||||||||| |||  ||||||||||| |||||||||||||||||  | ||||||||    
T  27480847 ggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccttgattttactaatccttccattttgcccctgtaattactaatcatt 27480748  T
Q  125 t-aaatttcgtcccttttcccgattaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccc 204  Q
    | ||| ||||||||| |||| |  |||||||| ||||||| |||||||||||||||| ||||| ||| |||||||||||||    
T  27480747 tgaaagttcgtccctcttcctggataatcactaccacgtcatcaaattagcaaaatggcatgggaattgacaaaaataccc 27480667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 25 - 163
Target Start/End: Original strand, 38643550 - 38643689
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    |||||||||||||||||||||| || ||||||||| ||||||||||||||||| ||| |||||||||||||||||||||| |||||||||||||||||||    
T  38643550 ggcttaaatatgcatttcatccctgcaattataggccatttgatttttcatccttgaccttactaatcctcccattttgctcctgtaaaaattaatcatt 38643649  T
Q  125 taa-atttcgtcccttttcccgattaatcactgccacgtc 163  Q
    ||| ||||||||||| | |||  ||||| |||| ||||||    
T  38643650 taagatttcgtccctctccccacttaattactgtcacgtc 38643689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 20 - 125
Target Start/End: Original strand, 12930767 - 12930872
Alignment:
Q  20 attttggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaa 119  Q
    |||| |||||||||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| ||| |||||    
T  12930767 atttaggcttaaatatgcatttcatccctgcaattataggtcatttgatttttcatccctgaacttactaatccttccattttgcccctgcaaatattaa 12930866  T
Q  120 tcattt 125  Q
    ||||||    
T  12930867 tcattt 12930872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 25 - 109
Target Start/End: Original strand, 37284109 - 37284193
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctg 109  Q
    ||||||||||||| |||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  37284109 ggcttaaatatgcttttcatccctgtaattataggccatttgatttttcatccctgagcttactaatcctcccattttgcccctg 37284193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 23 - 156
Target Start/End: Complemental strand, 38644762 - 38644628
Alignment:
Q  23 ttggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatca 122  Q
    |||||||||||||||||||||| | || |||||||||||||||||||||| |||||| |||||| ||||||| |||||||| || |||||||||||||||    
T  38644762 ttggcttaaatatgcatttcattcttgcaattataggtcatttgattttttatccctaagcttattaatccttccattttgaccttgtaaaaattaatca 38644663  T
Q  123 tttaa-atttcgtcccttttcccgattaatcactg 156  Q
    ||||| ||||| ||||| | |||  ||||||||||    
T  38644662 tttaagatttcatccctctccccacttaatcactg 38644628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 20 - 125
Target Start/End: Original strand, 12929282 - 12929387
Alignment:
Q  20 attttggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaa 119  Q
    |||| |||||||||||||||||||||| || || ||||||  |||||||||||||||||||| ||||||||||||||||||||||||||| ||| |||||    
T  12929282 atttaggcttaaatatgcatttcatccctgcaaatataggctatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaa 12929381  T
Q  120 tcattt 125  Q
    ||||||    
T  12929382 tcattt 12929387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 25 - 125
Target Start/End: Original strand, 7158231 - 7158331
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    |||||||||||||||||||||| |  ||||||||| ||||||||||||||||| ||| |||||||||||| |||||||||||||||||| ||||||||||    
T  7158231 ggcttaaatatgcatttcatccctacaattataggccatttgatttttcatccatgaacttactaatccttccattttgcccctgtaaatattaatcatt 7158330  T
Q  125 t 125  Q
    |    
T  7158331 t 7158331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 25 - 109
Target Start/End: Complemental strand, 37289410 - 37289326
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctg 109  Q
    ||||||||||||| |||||||| |||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  37289410 ggcttaaatatgcttttcatccctgtaattataggccatttggtttttcatccctgagcttactaatcctcccattttgcccctg 37289326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 116 - 204
Target Start/End: Complemental strand, 43124489 - 43124400
Alignment:
Q  116 ttaatcatttaaa-tttcgtcccttttcccgattaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccc 204  Q
    ||||||||||||| |||||||||| |||||  ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  43124489 ttaatcatttaaaatttcgtccctattcccagttaatcactgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccc 43124400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 83 - 207
Target Start/End: Complemental strand, 47559106 - 47558984
Alignment:
Q  83 cttactaatcctcccattttgcccctgtaaaaattaatcatttaaa-tttcgtcccttttcccgattaatcactgccacgtcctcaaattagcaaaatga 181  Q
    ||||||||||||||||||||  ||||||||||||||| |||||||| ||| || ||| | | || ||||||||| |||| |    |||||||||||||||    
T  47559106 cttactaatcctcccattttctccctgtaaaaattaaccatttaaaattttgttcctctcctcggttaatcacttccacatt---aaattagcaaaatga 47559010  T
Q  182 catggaaatggacaaaaataccctca 207  Q
    ||||||||||||||||||||||||||    
T  47559009 catggaaatggacaaaaataccctca 47558984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 101 - 207
Target Start/End: Complemental strand, 32688570 - 32688463
Alignment:
Q  101 ttgcccctgtaaaaattaatcatttaaa-tttcgtcccttttcccgattaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaa 199  Q
    |||||| || ||| |||||||||||||| |||||||||||  |||  ||||| ||||||||||| |||||||||||||||  ||||||||| ||||||||    
T  32688570 ttgcccttgcaaatattaatcatttaaaatttcgtcccttgacccacttaataactgccacgtcatcaaattagcaaaattgcatggaaatagacaaaaa 32688471  T
Q  200 taccctca 207  Q
    ||||||||    
T  32688470 taccctca 32688463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 115 - 207
Target Start/End: Complemental strand, 18087676 - 18087583
Alignment:
Q  115 attaatcatttaaa-tttcgtcccttttcccgattaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctca 207  Q
    |||||||||||||| ||| |||||||  |||  ||||| ||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||    
T  18087676 attaatcatttaaaattttgtcccttaacccacttaatgactgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaataccctca 18087583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 126 - 206
Target Start/End: Original strand, 18086391 - 18086471
Alignment:
Q  126 aaatttcgtcccttttcccgattaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    ||||||||||||||  |||  ||||| ||||||| ||| |||||||||||||||| |||||||||||||||||||||||||    
T  18086391 aaatttcgtcccttgacccagttaattactgccatgtcatcaaattagcaaaatggcatggaaatggacaaaaataccctc 18086471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 25 - 125
Target Start/End: Original strand, 43937894 - 43937994
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    ||||||||||||  |||| ||| ||||| |||||||||||||| |||||||||||||  ||||||||||| ||| | |||||||| ||| ||||||||||    
T  43937894 ggcttaaatatgtctttcgtccttgtaaatataggtcatttgaattttcatccctgaagttactaatccttccaatctgcccctgcaaatattaatcatt 43937993  T
Q  125 t 125  Q
    |    
T  43937994 t 43937994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 25628601 - 25628660
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    ||||||||||||||||| |||||||||||||||| ||||| |||||||||||||||||||    
T  25628601 ttaatcactgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 25628660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 116 - 206
Target Start/End: Complemental strand, 25453463 - 25453372
Alignment:
Q  116 ttaatcatttaa-atttcgtcccttttcccgattaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    |||||||||||| ||||||||| ||  || | |||||||| |||||||| |||||||||||||||| ||||| |||||||||||||| ||||    
T  25453463 ttaatcatttaacatttcgtcctttgaccagcttaatcaccgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaatatcctc 25453372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 28890702 - 28890761
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    |||||||||| |||||| |||||||||||||||| |||| ||||||||||||||||||||    
T  28890702 ttaatcactgtcacgtcatcaaattagcaaaatggcatgaaaatggacaaaaataccctc 28890761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 32934651 - 32934592
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    |||||||||| |||| | |||||||||||||||||||||| |||||||||||||||||||    
T  32934651 ttaatcactgtcacgacatcaaattagcaaaatgacatgggaatggacaaaaataccctc 32934592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 25 - 102
Target Start/End: Complemental strand, 31695714 - 31695637
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccatttt 102  Q
    |||| ||||||||||||||||| || || ||||||||||||||  |||||||||| | |||||||||||| |||||||    
T  31695714 ggctaaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccctaaacttactaatccttccatttt 31695637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 25 - 125
Target Start/End: Original strand, 26825630 - 26825730
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    ||||||||||||  |||| ||| ||||| |||||||||||||| ||||| |||||||  ||||||||| | ||| | |||||||| ||| ||||||||||    
T  26825630 ggcttaaatatgtctttcgtccctgtaaatataggtcatttgaattttcgtccctgaagttactaatcattccaatctgcccctgcaaagattaatcatt 26825729  T
Q  125 t 125  Q
    |    
T  26825730 t 26825730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 25 - 121
Target Start/End: Complemental strand, 37563738 - 37563642
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatc 121  Q
    ||||||||||||  |||| ||| ||||| |||||| ||||||| ||||| |||||||  ||||||||||| ||| |||||||||| ||| |||||||    
T  37563738 ggcttaaatatgtctttcgtccctgtaaatataggccatttgaattttcgtccctgaagttactaatccttccaatttgcccctgcaaatattaatc 37563642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 10600252 - 10600193
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    |||||||||| || ||| |||||||||||||||| ||||| |||||||||||||||||||    
T  10600252 ttaatcactgtcatgtcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 10600193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 32068399 - 32068340
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    ||||||||||||||||| |||||||||||||||| ||||| ||| |||||||| ||||||    
T  32068399 ttaatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaagaccctc 32068340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 116 - 206
Target Start/End: Original strand, 33808414 - 33808505
Alignment:
Q  116 ttaatcatttaaa-tttcgtcccttttcccgattaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    ||||||||||||| |||||||| ||  |||  |||||| ||||| |||| ||||||||||||||||  |||| |||||||||||||||||||    
T  33808414 ttaatcatttaaaatttcgtccattgacccagttaatcgctgccccgtcatcaaattagcaaaatgggatgggaatggacaaaaataccctc 33808505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 42618034 - 42618093
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    ||||||||| ||| ||| |||||||||||||||| ||||| |||||||||||||||||||    
T  42618034 ttaatcactaccaagtcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 42618093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 42618214 - 42618155
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    |||||||||| |||||| |||||||||||||||| ||||| |||||||||||||| ||||    
T  42618214 ttaatcactgtcacgtcatcaaattagcaaaatggcatgggaatggacaaaaatatcctc 42618155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 147 - 205
Target Start/End: Complemental strand, 23058732 - 23058674
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccct 205  Q
    ||||| ||||||||||| |||||||| ||||||| ||||| ||||||||||||||||||    
T  23058732 ttaattactgccacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccct 23058674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 116 - 204
Target Start/End: Complemental strand, 18855991 - 18855902
Alignment:
Q  116 ttaatcatttaaa-tttcgtcccttttcccgattaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccc 204  Q
    ||||||||||||| |||||||||||  |||  ||||| |||| |||||| |||||||||||||||  ||||| || ||||||||||||||    
T  18855991 ttaatcatttaaaatttcgtcccttaacccacttaatgactgacacgtcatcaaattagcaaaatagcatgggaaaggacaaaaataccc 18855902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 24 - 125
Target Start/End: Original strand, 40021490 - 40021591
Alignment:
Q  24 tggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcat 123  Q
    ||||| ||||||||||||||||| ||||| ||||||||||||||  |||||||| | | ||| ||||| || | |||||||| ||| ||| ||||| |||    
T  40021490 tggctaaaatatgcatttcatccctgtaaatataggtcatttgaaatttcatccataaacttgctaattcttctattttgccactgcaaatattaaacat 40021589  T
Q  124 tt 125  Q
    ||    
T  40021590 tt 40021591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 147 - 207
Target Start/End: Original strand, 5455950 - 5456010
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctca 207  Q
    ||||| |||||||| || |||||||||||||||| ||||  ||||||||||||||||||||    
T  5455950 ttaattactgccacatcatcaaattagcaaaatggcatgagaatggacaaaaataccctca 5456010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 147 - 207
Target Start/End: Original strand, 13384625 - 13384685
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctca 207  Q
    ||||| ||| ||| ||| |||||||| ||||||||||||| ||||||||||||||||||||    
T  13384625 ttaattactcccatgtcatcaaattaacaaaatgacatgggaatggacaaaaataccctca 13384685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 25 - 125
Target Start/End: Complemental strand, 40022628 - 40022529
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    |||| ||||||| ||||||||| || || ||||| ||||||||  |||||||||||| |||||||||||| |||||||| | ||| ||| ||||| ||||    
T  40022628 ggctaaaatatgtatttcatccctgcaaatatag-tcatttgaaatttcatccctgatcttactaatccttccattttgtcactgcaaatattaagcatt 40022530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 22081682 - 22081741
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    ||||||||||||| ||| |||||||||| ||||| ||||  |||||||||||||||||||    
T  22081682 ttaatcactgccaagtcatcaaattagcgaaatggcatgagaatggacaaaaataccctc 22081741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 25628781 - 25628722
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    |||||||||| || ||| |||||||||||||||| ||||| ||||||||||| |||||||    
T  25628781 ttaatcactgtcaagtcatcaaattagcaaaatggcatgggaatggacaaaactaccctc 25628722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 27138244 - 27138185
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    |||||||| |||| ||| |||||||| |||||| |||||| |||||||||||||||||||    
T  27138244 ttaatcaccgccaagtcatcaaattaacaaaataacatgggaatggacaaaaataccctc 27138185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 32068219 - 32068278
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    ||||||| ||||| ||| |||||||||||||||| ||||| || ||||||||||||||||    
T  32068219 ttaatcaatgccaagtcatcaaattagcaaaatggcatgggaaaggacaaaaataccctc 32068278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 101 - 207
Target Start/End: Original strand, 32687473 - 32687580
Alignment:
Q  101 ttgcccctgtaaaaattaatcatttaaa-tttcgtcccttttcccgattaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaa 199  Q
    |||||| || ||| |||||||||||||| |||||| ||||  ||| || ||| |||||||| || |||||||||||||||  ||||| ||||||| ||||    
T  32687473 ttgcccttgcaaatattaatcatttaaaatttcgttccttgacccaatcaatgactgccacttcatcaaattagcaaaattgcatgggaatggaccaaaa 32687572  T
Q  200 taccctca 207  Q
    ||| ||||    
T  32687573 tacactca 32687580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 32934471 - 32934530
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    ||||||||| ||| ||| |||||||||||||||| ||| | |||||||||||||||||||    
T  32934471 ttaatcactaccaagtcatcaaattagcaaaatggcataggaatggacaaaaataccctc 32934530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 46205612 - 46205553
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    |||||||||  |||||| ||||||||| |||||| ||||| |||||||||||||||||||    
T  46205612 ttaatcactatcacgtcatcaaattaggaaaatggcatgggaatggacaaaaataccctc 46205553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 131
Target Start/End: Complemental strand, 7159312 - 7159207
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    ||||||||||||   ||||||| || || ||||| |||||||| ||||| | |||||  |||||||||||||||||||  ||||| ||| ||||||||||    
T  7159312 ggcttaaatatgtcattcatccctgcaaatatagatcatttgaattttcgttcctgaagttactaatcctcccatttt-accctgcaaatattaatcatt 7159214  T
Q  125 taaattt 131  Q
    | |||||    
T  7159213 tgaattt 7159207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 147 - 207
Target Start/End: Original strand, 12228508 - 12228568
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctca 207  Q
    ||||| |||| |||||| |||||||| ||||||| ||||  ||||||||||||||||||||    
T  12228508 ttaatgactgtcacgtcatcaaattaacaaaatggcatgagaatggacaaaaataccctca 12228568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 25453251 - 25453307
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaatacc 203  Q
    ||||||||| ||| ||| |||||||||||||| | ||||| ||||||||||||||||    
T  25453251 ttaatcactaccaagtcatcaaattagcaaaaaggcatgggaatggacaaaaatacc 25453307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 25 - 125
Target Start/End: Complemental strand, 43938278 - 43938178
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    ||||||||||||  |||| ||| || || |||| | ||||||| ||||| |||||||  ||||||||||| ||| | |||||||| ||| ||||||||||    
T  43938278 ggcttaaatatgtctttcgtccttgcaaatataagccatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcatt 43938179  T
Q  125 t 125  Q
    |    
T  43938178 t 43938178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 43266389 - 43266448
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    |||||||||| |||||| |||||||| |||||||  |||| |||| ||||||||||||||    
T  43266389 ttaatcactgtcacgtcatcaaattaacaaaatggtatgggaatgaacaaaaataccctc 43266448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 147 - 202
Target Start/End: Complemental strand, 43266569 - 43266514
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaatac 202  Q
    ||||||||| | | ||| |||||||||||||||||||||  |||||||||||||||    
T  43266569 ttaatcactactaagtcatcaaattagcaaaatgacatgagaatggacaaaaatac 43266514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 165 - 207
Target Start/End: Original strand, 23058570 - 23058612
Alignment:
Q  165 tcaaattagcaaaatgacatggaaatggacaaaaataccctca 207  Q
    |||||||||||||||| ||||| ||||||||||||||| ||||    
T  23058570 tcaaattagcaaaatgtcatgggaatggacaaaaatacactca 23058612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 92
Target Start/End: Original strand, 26825824 - 26825890
Alignment:
Q  26 gcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatc 92  Q
    ||||||||| | ||||||||| || || |||||||||||||| ||||| |||||||  |||||||||    
T  26825824 gcttaaataggtatttcatccctgcaaatataggtcatttgaattttcgtccctgaagttactaatc 26825890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 30 - 100
Target Start/End: Original strand, 31694476 - 31694546
Alignment:
Q  30 aaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccatt 100  Q
    ||||||||||||||||| || || |||||  |||||||  |||||||||| |  |||||||||||||||||    
T  31694476 aaatatgcatttcatccctgcaaatatagtccatttgaaatttcatccctaaatttactaatcctcccatt 31694546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 23 - 81
Target Start/End: Complemental strand, 47121470 - 47121412
Alignment:
Q  23 ttggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctga 81  Q
    |||||||||||| || |||||||| || || |||||||||||||| ||||| |||||||    
T  47121470 ttggcttaaataggcctttcatccctgcaaatataggtcatttgaattttcgtccctga 47121412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 116 - 199
Target Start/End: Original strand, 39274961 - 39275045
Alignment:
Q  116 ttaatcatttaaa-tttcgtcccttttcccga-ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaa 199  Q
    ||||||||||||| |||||||| |||  || | ||||||||||||||||| |||||||||| ||||| ||||  ||||||||||||    
T  39274961 ttaatcatttaaaatttcgtccttttgaccaacttaatcactgccacgtcatcaaattagc-aaatggcatgagaatggacaaaaa 39275045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 21 - 125
Target Start/End: Complemental strand, 25049549 - 25049445
Alignment:
Q  21 ttttggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaat 120  Q
    |||| ||||||||| |  |||| ||| ||||| |||||||||||||| ||||  |||||||  ||||||||| | ||| | |||| ||| |||| |||||    
T  25049549 tttttgcttaaataggtctttcgtccctgtaaatataggtcatttgaatttttctccctgaagttactaatctttccaatatgccactgcaaaatttaat 25049450  T
Q  121 cattt 125  Q
    |||||    
T  25049449 cattt 25049445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 84 - 132
Target Start/End: Complemental strand, 26830066 - 26830018
Alignment:
Q  84 ttactaatcctcccattttgcccctgtaaaaattaatcatttaaatttc 132  Q
    ||||||||||| |||||||||| ||| ||| ||||||||||| ||||||    
T  26830066 ttactaatccttccattttgccactgcaaatattaatcattttaatttc 26830018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 125
Target Start/End: Complemental strand, 27558236 - 27558136
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    |||||||||| |  |||| ||| || || |||||||||||||| ||||| |||  ||  ||||||||||| ||||||||||  || ||| ||||||||||    
T  27558236 ggcttaaataggtctttcgtccctgcaaatataggtcatttgaattttcgtccacgaagttactaatccttccattttgccattgcaaatattaatcatt 27558137  T
Q  125 t 125  Q
    |    
T  27558136 t 27558136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 125
Target Start/End: Complemental strand, 34454864 - 34454764
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    |||||||||| |  |||||||| || || ||||| |||||||| ||||| |||||||  |||||||| ||  || | |||||||| ||| ||||||||||    
T  34454864 ggcttaaataggactttcatccctgcaaatatagatcatttgaattttcgtccctgaagttactaattctttcaatctgcccctgcaaatattaatcatt 34454765  T
Q  125 t 125  Q
    |    
T  34454764 t 34454764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 125
Target Start/End: Original strand, 37563354 - 37563454
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    ||||||||||||  |||  ||| || || |||||| ||||||| ||||| |||||||  ||||||||||| | | | |||||||| ||| ||||||||||    
T  37563354 ggcttaaatatgtcttttgtccctgcaaatataggccatttgaattttcgtccctgaatttactaatccttctaatctgcccctgcaaatattaatcatt 37563453  T
Q  125 t 125  Q
    |    
T  37563454 t 37563454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 47739038 - 47738994
Alignment:
Q  84 ttactaatcctcccattttgcccctgtaaaaattaatcatttaaa 128  Q
    ||||||||||||||| |||||||||| ||| |||||||| |||||    
T  47739038 ttactaatcctcccaatttgcccctgcaaatattaatcacttaaa 47738994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 147 - 207
Target Start/End: Original strand, 47945471 - 47945531
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctca 207  Q
    ||||| || ||||| || |||||||| ||||||| ||| | ||||||||||||||||||||    
T  47945471 ttaatgaccgccacatcatcaaattaacaaaatggcataggaatggacaaaaataccctca 47945531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 147 - 207
Target Start/End: Original strand, 47950901 - 47950961
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctca 207  Q
    ||||| || ||||| || |||||||| ||||||| ||| | ||||||||||||||||||||    
T  47950901 ttaatgaccgccacatcatcaaattaacaaaatggcataggaatggacaaaaataccctca 47950961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 113; Significance: 5e-57; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 25 - 204
Target Start/End: Complemental strand, 4117647 - 4117467
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    ||||||||||||  |||||||| |||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  4117647 ggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaagttaatcatt 4117548  T
Q  125 t-aaatttcgtcccttttcccgattaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccc 204  Q
    | ||| ||||||||| ||| || |||||||||||||| || |||||||||||||||| ||||| ||| |||||||||||||    
T  4117547 tgaaaattcgtccctcttctcggttaatcactgccacatcatcaaattagcaaaatggcatgggaattgacaaaaataccc 4117467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 21 - 204
Target Start/End: Original strand, 33399962 - 33400146
Alignment:
Q  21 ttttggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaat 120  Q
    ||||||||||||||||| |||||||| |||||||||||| | ||||||||||||||||||| |||||||||||| |||||||||||||||||  | ||||    
T  33399962 ttttggcttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaat 33400061  T
Q  121 cattt-aaatttcgtcccttttcccgattaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccc 204  Q
    ||||| ||| ||||||||| ||||||  |||||||||||||||| |||||||||||||||| ||||| ||| |||||||||||||    
T  33400062 catttgaaagttcgtccctcttcccggataatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaataccc 33400146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 25 - 204
Target Start/End: Original strand, 4116799 - 4116979
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    ||||||||||||  |||||||| |||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  4116799 ggcttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaagttaatcatt 4116898  T
Q  125 t-aaatttcgtcccttttcccgattaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccc 204  Q
    | ||| ||||||||| ||| || |||||||||||||| |  |||||||||||||||| | ||| ||| |||||||||||||    
T  4116899 tgaaaattcgtccctcttctcggttaatcactgccacattatcaaattagcaaaatggcgtgggaattgacaaaaataccc 4116979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 25 - 204
Target Start/End: Original strand, 14656480 - 14656660
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    ||||||||||||| |||||||| || |||||||||   |||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  14656480 ggcttaaatatgcttttcatccctgcaattataggctgtttgatttttcatccctgagcttactaatcctcctattttgcccctgtaaaagttaatcatt 14656579  T
Q  125 t-aaatttcgtcccttttcccgattaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccc 204  Q
    | ||| ||||||||| |||||| ||||||||||||| ||| ||||||||| |||||| ||||| ||| |||||||||||||    
T  14656580 tgaaagttcgtccctcttcccggttaatcactgccatgtcatcaaattagtaaaatggcatgggaattgacaaaaataccc 14656660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 25 - 204
Target Start/End: Complemental strand, 33401226 - 33401045
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    ||||||||||||| |||||||| || ||||||||| | ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  33401226 ggcttaaatatgcttttcatccctgcaattataggccgtttgatttttcatccctgaacttactaatcctcccattttgcccctgtaaaagttaatcatt 33401127  T
Q  125 taaat-ttcgtcccttttcccgattaatcactgccacgtcctcaaattagc-aaaatgacatggaaatggacaaaaataccc 204  Q
    | ||| ||||| ||| |||||| |||| |||||||||||| |||||||||| |||||| ||||| ||| |||||||||||||    
T  33401126 tgaatattcgtacctcttcccggttaaccactgccacgtcatcaaattagcaaaaatggcatgggaattgacaaaaataccc 33401045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 25 - 204
Target Start/End: Complemental strand, 14657309 - 14657129
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    ||||||||||||| |||||||| | |||||||||| | |||||||||| |||||||| |||||||||||| |||||||||||||||||  | ||||||||    
T  14657309 ggcttaaatatgcttttcatccctataattataggccgtttgattttttatccctgaccttactaatccttccattttgcccctgtaattactaatcatt 14657210  T
Q  125 t-aaatttcgtcccttttcccgattaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccc 204  Q
    | ||| ||||||||| ||||||  |||||||||||||||| |||||||||||||||| ||||| ||| |||||||||||||    
T  14657209 tgaaagttcgtccctcttcccggataatcactgccacgtcatcaaattagcaaaatggcatgggaattgacaaaaataccc 14657129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 28 - 204
Target Start/End: Complemental strand, 1661527 - 1661350
Alignment:
Q  28 ttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcattt-a 126  Q
    |||||||||  |||||||| |||||||||||| | ||||||||||||||||||| |||||||||||| ||||||| |||||||||  | ||||||||| |    
T  1661527 ttaaatatgattttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttacccctgtaattactaatcatttga 1661428  T
Q  127 aatttcgtcccttttcccgattaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccc 204  Q
    || ||||||||| ||||||  |||||||| |||| || |||||||| ||||||| ||||| ||| |||||||||||||    
T  1661427 aagttcgtccctcttcccggataatcacttccacttcatcaaattatcaaaatggcatgggaattgacaaaaataccc 1661350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 25 - 125
Target Start/End: Complemental strand, 17784485 - 17784385
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    ||||||||||||| |||||||| || ||| ||||| ||||||||||||||||| ||| ||||||||||||||||||||||||||| ||| ||||||||||    
T  17784485 ggcttaaatatgcttttcatccctgcaatgataggccatttgatttttcatccatgaacttactaatcctcccattttgcccctgcaaatattaatcatt 17784386  T
Q  125 t 125  Q
    |    
T  17784385 t 17784385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 31 - 109
Target Start/End: Complemental strand, 8427459 - 8427381
Alignment:
Q  31 aatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctg 109  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  8427459 aatatgcatttcatccctgcaattataggtcatttgatttttcatccctggacttactaatcctcccattttgcccctg 8427381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 22503077 - 22503018
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||    
T  22503077 ttaatcactgccacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccctc 22503018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 25 - 125
Target Start/End: Original strand, 5064335 - 5064435
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    ||||||||||||  |||| ||| ||||| |||| ||||||||| ||||| |||||||  ||||||||||||||| |||||||||| ||| ||||||||||    
T  5064335 ggcttaaatatgtctttcgtccctgtaaatataagtcatttgaattttcgtccctgaagttactaatcctcccaatttgcccctgcaaatattaatcatt 5064434  T
Q  125 t 125  Q
    |    
T  5064435 t 5064435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 23 - 131
Target Start/End: Original strand, 8427198 - 8427306
Alignment:
Q  23 ttggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatca 122  Q
    ||||||||||||||  |||||||| || || |||||||||||||| ||||| || || |  |||||||||||||||||||||||||| ||| ||||||||    
T  8427198 ttggcttaaatatgtctttcatccttgcaaatataggtcatttgaattttcgtctctcaagttactaatcctcccattttgcccctgcaaatattaatca 8427297  T
Q  123 tttaaattt 131  Q
     || |||||    
T  8427298 gttgaattt 8427306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 7905546 - 7905487
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    ||||||||||||||||| |||||||||||||||| ||||| |||||||||||||||||||    
T  7905546 ttaatcactgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 7905487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 21836153 - 21836212
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    ||||||||||||||||| |||||||||||||||| ||||| |||||||||||||||||||    
T  21836153 ttaatcactgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 21836212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 31407181 - 31407122
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    |||||||||| |||||| |||||||||||||||||||||| |||||||||||||||||||    
T  31407181 ttaatcactgtcacgtcatcaaattagcaaaatgacatgggaatggacaaaaataccctc 31407122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 15913851 - 15913792
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    |||||||||| |||||| |||||||||||||||| ||||| |||||||||||||||||||    
T  15913851 ttaatcactgtcacgtcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 15913792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 31407001 - 31407060
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    ||||||||| ||| ||| |||||||||||||||| |||||||||||||||||||||||||    
T  31407001 ttaatcactcccaagtcatcaaattagcaaaatggcatggaaatggacaaaaataccctc 31407060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 116 - 207
Target Start/End: Original strand, 8089534 - 8089626
Alignment:
Q  116 ttaatcatttaaa-tttcgtcccttttcccgattaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctca 207  Q
    ||||||||||||| |||||||||||  |||  ||||| || | |||||| |||||||| ||||||| ||||| ||||||||||||||||||||    
T  8089534 ttaatcatttaaaatttcgtcccttaacccacttaatgaccgacacgtcatcaaattaacaaaatggcatgggaatggacaaaaataccctca 8089626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 25 - 125
Target Start/End: Complemental strand, 13480592 - 13480492
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    ||||||||||||  |||| ||| ||||| |||||||||||||| ||||| |||||||  ||||||||||| ||| | |||||||  ||| ||||||||||    
T  13480592 ggcttaaatatgtctttcgtccttgtaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccctacaaatattaatcatt 13480493  T
Q  125 t 125  Q
    |    
T  13480492 t 13480492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 21 - 125
Target Start/End: Complemental strand, 23292132 - 23292028
Alignment:
Q  21 ttttggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaat 120  Q
    ||||||||||||||||  |||| |||||| || |||||||||||||| ||||| |||||||  ||||||||||| ||| | |  ||||| ||| ||||||    
T  23292132 ttttggcttaaatatgtctttcgtccatgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctatccctgcaaatattaat 23292033  T
Q  121 cattt 125  Q
    |||||    
T  23292032 cattt 23292028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 7160927 - 7160986
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    ||||||||| ||||||| |||||||||||||||  ||||| |||||||||||||||||||    
T  7160927 ttaatcactaccacgtcatcaaattagcaaaatagcatgggaatggacaaaaataccctc 7160986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 12065343 - 12065402
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    |||||||||| || ||| |||||||||||||||| ||||| |||||||||||||||||||    
T  12065343 ttaatcactgtcaggtcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 12065402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 15913671 - 15913730
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    ||||||||| ||| ||| |||||||||||||||| ||||||||| |||||||||||||||    
T  15913671 ttaatcactaccaagtcatcaaattagcaaaatggcatggaaattgacaaaaataccctc 15913730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 147 - 205
Target Start/End: Original strand, 20651133 - 20651191
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccct 205  Q
    ||||| ||||||||||| |||||||||||||||| ||||| ||||||||||||| ||||    
T  20651133 ttaataactgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaatgccct 20651191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 116 - 200
Target Start/End: Complemental strand, 20651984 - 20651899
Alignment:
Q  116 ttaatcatttaaa-tttcgtcccttttcccgattaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaat 200  Q
    ||||||||||||| ||||||||||   |||  ||||| ||||||||||| | |||||||||||||||||||| |||||| ||||||    
T  20651984 ttaatcatttaaaatttcgtccctgaacccagttaattactgccacgtcattaaattagcaaaatgacatgggaatggataaaaat 20651899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 25 - 125
Target Start/End: Original strand, 13480208 - 13480308
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    ||||||||||||  |||| ||| || || |||||| ||||||| ||||| |||||||  ||||||||||| ||| | |||||||| ||| ||||||||||    
T  13480208 ggcttaaatatgtctttcgtccctgcaaatataggccatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcatt 13480307  T
Q  125 t 125  Q
    |    
T  13480308 t 13480308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 25 - 125
Target Start/End: Complemental strand, 30234976 - 30234876
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    ||||||||||||  |||| ||| || || |||||||  ||||| |||||||||||||  ||||||||||| ||| | |||||||| ||| ||||||||||    
T  30234976 ggcttaaatatgtctttcgtccctgcaaatataggttgtttgaattttcatccctgaagttactaatccttccaatctgcccctgcaaatattaatcatt 30234877  T
Q  125 t 125  Q
    |    
T  30234876 t 30234876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 54 - 125
Target Start/End: Complemental strand, 5064690 - 5064619
Alignment:
Q  54 tataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcattt 125  Q
    |||||| ||||||| ||||| |||||||| ||||||||||| ||| | |||||||| ||| |||||||||||    
T  5064690 tataggccatttgaattttcgtccctgaggttactaatccttccaatctgcccctgcaaatattaatcattt 5064619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 21836333 - 21836274
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    ||||||||||||| ||| |||||||| ||||||| ||||| |||||||||||||| ||||    
T  21836333 ttaatcactgccaagtcatcaaattaacaaaatggcatgggaatggacaaaaatatcctc 21836274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 26 - 125
Target Start/End: Original strand, 23291745 - 23291844
Alignment:
Q  26 gcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcattt 125  Q
    |||||||||||  |||| ||| |  || |||||| ||||||| |||||||||||||  ||||||||||| ||| | |||||||| ||| |||||||||||    
T  23291745 gcttaaatatgtctttcgtccctacaaatataggccatttgaattttcatccctgaagttactaatccttccaatctgcccctgcaaatattaatcattt 23291844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 59 - 125
Target Start/End: Complemental strand, 20995041 - 20994975
Alignment:
Q  59 gtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcattt 125  Q
    ||||||||| |||||||||||||  ||||||||||| ||| | |||||||| ||| |||||||||||    
T  20995041 gtcatttgaattttcatccctgaagttactaatccttccaatctgcccctgcaaatattaatcattt 20994975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 25 - 125
Target Start/End: Complemental strand, 32337950 - 32337851
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    ||||||||||||  |||| ||| || || |||||||||||||| ||||| |||||||  ||||| ||||| ||| | |||||||| ||| ||||||||||    
T  32337950 ggcttaaatatgtctttcgtcc-tgcaaatataggtcatttgaattttcgtccctgaagttactgatccttccaatatgcccctgcaaatattaatcatt 32337852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 125
Target Start/End: Complemental strand, 3299942 - 3299843
Alignment:
Q  26 gcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcattt 125  Q
    ||||||||||| ||||| ||| || || |||||||||||||| ||||| ||| |||  ||||||||||| ||| | ||||  || ||| |||||||||||    
T  3299942 gcttaaatatgtatttcgtccctgcaaatataggtcatttgaattttcgtccttgaagttactaatccttccaatctgccattgcaaatattaatcattt 3299843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 6517625 - 6517684
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    ||||||||| ||| ||| |||||||||||||||| ||||| |||| ||||||||| ||||    
T  6517625 ttaatcactaccaagtcatcaaattagcaaaatggcatgggaatgaacaaaaatagcctc 6517684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 7905366 - 7905425
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    |||||||| | || ||| |||||||||||||||| || || |||||||||||||||||||    
T  7905366 ttaatcaccgtcaagtcatcaaattagcaaaatggcacgggaatggacaaaaataccctc 7905425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 10781461 - 10781402
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    ||||||||| ||| ||| ||||||| |||||||| ||||| |||||||||||||| ||||    
T  10781461 ttaatcactaccaagtcatcaaattcgcaaaatggcatgggaatggacaaaaatatcctc 10781402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 22502897 - 22502956
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    ||||| ||||||| ||| ||||||||||||||||  |||  |||||||||||||||||||    
T  22502897 ttaataactgccaagtcatcaaattagcaaaatggtatgagaatggacaaaaataccctc 22502956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 23 - 125
Target Start/End: Complemental strand, 738083 - 737981
Alignment:
Q  23 ttggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatca 122  Q
    ||||||||||||||  |||| ||| || || |||||||||||||| ||||| ||| |||  ||||||||||| ||| | |||||||  ||  ||||||||    
T  738083 ttggcttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccatgaagttactaatccttccaatctgccccttcaagtattaatca 737984  T
Q  123 ttt 125  Q
    |||    
T  737983 ttt 737981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 127
Target Start/End: Original strand, 20994815 - 20994920
Alignment:
Q  21 ttttggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaat 120  Q
    ||||||||||||||||  |||| ||| ||||| ||||| |||||||| ||||| || ||||  ||||||||||| | | | || ||||| ||| ||||||    
T  20994815 ttttggcttaaatatgtctttcgtccctgtaaatatagttcatttgaattttcgtctctgaagttactaatccttctaatctg-ccctgcaaatattaat 20994913  T
Q  121 catttaa 127  Q
    |||||||    
T  20994914 catttaa 20994920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 204
Target Start/End: Original strand, 139916 - 139972
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccc 204  Q
    ||||| ||||||||||| |||||||||||||||||| || ||| || |||||||||||    
T  139916 ttaatgactgccacgtcatcaaattagcaaaatgacgtgaaaaagg-caaaaataccc 139972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 204
Target Start/End: Original strand, 147937 - 147993
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccc 204  Q
    ||||| ||||||||||| |||||||||||||||||| || ||| || |||||||||||    
T  147937 ttaatgactgccacgtcatcaaattagcaaaatgacgtgaaaaagg-caaaaataccc 147993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 94
Target Start/End: Complemental strand, 15819874 - 15819805
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcct 94  Q
    ||||||||||||  |||| ||| || || |||||||||||||| ||||| |||||||  |||||||||||    
T  15819874 ggcttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatcct 15819805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 125
Target Start/End: Original strand, 21880363 - 21880464
Alignment:
Q  24 tggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcat 123  Q
    |||||||||||||  |||| | | ||||| |||| ||||||||| ||||| || ||||  |||||||||||  || | |||||||| ||| |||||||||    
T  21880363 tggcttaaatatgtctttcgttcctgtaaatataagtcatttgaattttcgtctctgaagttactaatcctttcaatctgcccctgcaaatattaatcat 21880462  T
Q  124 tt 125  Q
    ||    
T  21880463 tt 21880464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 21 - 125
Target Start/End: Complemental strand, 1066526 - 1066423
Alignment:
Q  21 ttttggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaat 120  Q
    |||||||||||||| |  |||||||  ||||| ||||| |||||||| ||||| |||||||  ||||||||  | ||||||||||  || ||| ||||||    
T  1066526 ttttggcttaaataggtttttcatct-tgtaaatatagatcatttgaattttcgtccctgaagttactaatatttccattttgccattgcaaatattaat 1066428  T
Q  121 cattt 125  Q
    |||||    
T  1066427 cattt 1066423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 61 - 125
Target Start/End: Original strand, 32337600 - 32337664
Alignment:
Q  61 catttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcattt 125  Q
    ||||||| ||||| |||||||  ||||||||||| ||| | |||||||| ||| |||||||||||    
T  32337600 catttgaattttcgtccctgaagttactaatccttccaatatgcccctgcaaatattaatcattt 32337664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 94; Significance: 1e-45; HSPs: 2)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 23 - 163
Target Start/End: Original strand, 13607 - 13748
Alignment:
Q  23 ttggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatca 122  Q
    |||||||||||||||||||||||| || ||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  13607 ttggcttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgagcttactaatccttccattttgcccctataaaaattaatca 13706  T
Q  123 tttaa-atttcgtcccttttcccgattaatcactgccacgtc 163  Q
    ||||| ||||||||||| | |||  ||||||||| |||||||    
T  13707 tttaagatttcgtccctctccccacttaatcactaccacgtc 13748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 27 - 160
Target Start/End: Complemental strand, 14691 - 14557
Alignment:
Q  27 cttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcattta 126  Q
    |||||||||||||||||| | |  ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  14691 cttaaatatgcatttcattccttcaattataggccatttgatttttcatccctgagcttactaatcctcccattttgcccctataaaaattaatcattta 14592  T
Q  127 a-atttcgtcccttttcccgattaatcactgccac 160  Q
    | ||||||||||| | |||  ||||||||||||||    
T  14591 agatttcgtccctctccccacttaatcactgccac 14557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 87; Significance: 2e-41; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 25 - 131
Target Start/End: Complemental strand, 262541 - 262435
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| ||| ||||||||||    
T  262541 ggcttaaatatgcatttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccatttttcccctgcaaatattaatcatt 262442  T
Q  125 taaattt 131  Q
    |||||||    
T  262441 taaattt 262435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 20 - 131
Target Start/End: Original strand, 260996 - 261107
Alignment:
Q  20 attttggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaa 119  Q
    |||| |||||||||||||||||||||| || ||||||||||||||||||||||||||| |||  |||||||||||||||||||||||||| ||| |||||    
T  260996 atttaggcttaaatatgcatttcatccctgcaattataggtcatttgatttttcatccatgaatttactaatcctcccattttgcccctgcaaatattaa 261095  T
Q  120 tcatttaaattt 131  Q
    |||||| |||||    
T  261096 tcatttgaattt 261107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1493 (Bit Score: 73; Significance: 4e-33; HSPs: 2)
Name: scaffold1493
Description:

Target: scaffold1493; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 25 - 125
Target Start/End: Original strand, 593 - 693
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    |||||||||||||||||||||  || ||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| ||| ||||||||||    
T  593 ggcttaaatatgcatttcatcactgcaattataggtcatttgatttttcatccctgaacttactaatcctctcattttgcccctgcaaatattaatcatt 692  T
Q  125 t 125  Q
    |    
T  693 t 693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1493; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 25 - 125
Target Start/End: Complemental strand, 977 - 877
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    ||||||||||||  |||| ||| ||||| ||| || ||||||| ||||| |||||||  ||||||||||| ||| | |||||||| ||| ||||||||||    
T  977 ggcttaaatatgtctttcgtccctgtaaatattggccatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcatt 878  T
Q  125 t 125  Q
    |    
T  877 t 877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 24 - 125
Target Start/End: Original strand, 73108 - 73209
Alignment:
Q  24 tggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcat 123  Q
    |||||||||||||| |||||||| ||||||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||||||  | |||||||    
T  73108 tggcttaaatatgcttttcatccctgtaattatgggccatttgacttttcatccctgagcttactaatcctcccattttgcccctgtaattactaatcat 73207  T
Q  124 tt 125  Q
    ||    
T  73208 tt 73209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 65; Significance: 2e-28; HSPs: 2)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 25 - 109
Target Start/End: Complemental strand, 14477 - 14393
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctg 109  Q
    ||||||||||||| ||||| || |||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  14477 ggcttaaatatgcttttcacccctgtaattataggccatttgatttttcatccctgagcttactaatcctcccattttacccctg 14393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 25 - 109
Target Start/End: Original strand, 13134 - 13218
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctg 109  Q
    ||||||||||||| |||||||| ||||| |||||  |||||||||||||||| ||||| ||| ||||||||||||||||||||||    
T  13134 ggcttaaatatgcttttcatccctgtaaatatagaccatttgatttttcatctctgagtttagtaatcctcccattttgcccctg 13218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0775 (Bit Score: 51; Significance: 5e-20; HSPs: 2)
Name: scaffold0775
Description:

Target: scaffold0775; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 115 - 204
Target Start/End: Original strand, 5052 - 5142
Alignment:
Q  115 attaatcatttaaa-tttcgtcccttttcccgattaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccc 204  Q
    |||||||||||||| |||||||| ||  ||  ||||||| |||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  5052 attaatcatttaaaatttcgtcctttgacctaattaatcgctgccacgtcatcaaattagcaaaatgacatggaaaaggacaaaaataccc 5142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0775; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 116 - 203
Target Start/End: Complemental strand, 6315 - 6227
Alignment:
Q  116 ttaatcatttaaa-tttcgtcccttttcccgattaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaatacc 203  Q
    ||||||||||||| |||||| ||||  |||  ||||| ||||||||||| ||||||||||||| || ||| | || |||||||||||||    
T  6315 ttaatcatttaaaatttcgttccttaacccacttaatgactgccacgtcatcaaattagcaaagtggcataggaaaggacaaaaatacc 6227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 48; Significance: 3e-18; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 11443 - 11384
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    ||||||||||||||||| |||||||||||||||| ||||| |||||||||||||||||||    
T  11443 ttaatcactgccacgtcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 11384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 11263 - 11322
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    ||||||||||||| ||| |||||||||||||||| ||||| |||||||||||||||||||    
T  11263 ttaatcactgccaagtcatcaaattagcaaaatggcatgggaatggacaaaaataccctc 11322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0388 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 12542 - 12486
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaatacc 203  Q
    ||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||||    
T  12542 ttaatcactgccacgtcatcaaattagcaaaatgacatgggaatagacaaaaatacc 12486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0388; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 149 - 206
Target Start/End: Original strand, 12364 - 12421
Alignment:
Q  149 aatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    ||||||| ||| ||| ||||||||||||||||||||||||||||||||||||| ||||    
T  12364 aatcactcccaagtcatcaaattagcaaaatgacatggaaatggacaaaaatatcctc 12421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 147 - 207
Target Start/End: Original strand, 221912 - 221972
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctca 207  Q
    ||||||||||||||||| |||||||||||||||| ||||| |||| |||||||||||||||    
T  221912 ttaatcactgccacgtcatcaaattagcaaaatggcatgggaatgaacaaaaataccctca 221972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 222092 - 222033
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctc 206  Q
    ||||||||||||| ||| |||||||| ||||||| ||||| |||||||||||||||||||    
T  222092 ttaatcactgccaagtcatcaaattaacaaaatggcatgggaatggacaaaaataccctc 222033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0771 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0771
Description:

Target: scaffold0771; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 147 - 207
Target Start/End: Original strand, 1043 - 1103
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaataccctca 207  Q
    |||||||||| || ||| |||||||||||||||| ||||| ||||||||||||||||||||    
T  1043 ttaatcactgtcaagtcatcaaattagcaaaatggcatgggaatggacaaaaataccctca 1103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 147 - 201
Target Start/End: Complemental strand, 12083 - 12029
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaata 201  Q
    ||||||||||||||||| |||||||||||||||| ||||  ||||||||||||||    
T  12083 ttaatcactgccacgtcatcaaattagcaaaatggcatgagaatggacaaaaata 12029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0206 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 25 - 125
Target Start/End: Original strand, 10325 - 10425
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    |||||||||| |  |||| ||| || || ||||| |||||||| ||||| |||||||  ||||||||||| ||| |||||||||| ||| ||||||||||    
T  10325 ggcttaaataggtctttcgtccctgcaaatatagatcatttgaattttcgtccctgaagttactaatccttccaatttgcccctgcaaatattaatcatt 10424  T
Q  125 t 125  Q
    |    
T  10425 t 10425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 146 - 202
Target Start/End: Original strand, 19979 - 20035
Alignment:
Q  146 attaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaatac 202  Q
    |||||| |||| |||||| |||||||||||||||| ||||| |||||||||||||||    
T  19979 attaatgactgtcacgtcatcaaattagcaaaatggcatgggaatggacaaaaatac 20035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 147 - 201
Target Start/End: Original strand, 2516 - 2570
Alignment:
Q  147 ttaatcactgccacgtcctcaaattagcaaaatgacatggaaatggacaaaaata 201  Q
    ||||||||| ||||||  |||||||||||||||| ||||| ||||||||||||||    
T  2516 ttaatcactaccacgttatcaaattagcaaaatggcatgggaatggacaaaaata 2570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0233 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0233
Description:

Target: scaffold0233; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 54 - 125
Target Start/End: Original strand, 8462 - 8533
Alignment:
Q  54 tataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcattt 125  Q
    |||||||||||||| ||||| |||||||  ||||||||||| ||| | |||| ||| ||| |||||||||||    
T  8462 tataggtcatttgaattttcgtccctgaagttactaatccttccaatctgccactgcaaatattaatcattt 8533  T

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Target: scaffold0233; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 125
Target Start/End: Complemental strand, 8816 - 8716
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    |||||||||| | ||||| ||| ||||| |||||||||||||| ||| |||||  ||  ||| ||||||| ||| |||| | ||| ||| ||||||||||    
T  8816 ggcttaaataggtatttcgtccctgtaaatataggtcatttgaatttccatccgcgaagttattaatccttccaatttgtcactgcaaatattaatcatt 8717  T
Q  125 t 125  Q
    |    
T  8716 t 8716  T

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Target: scaffold0202 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0202
Description:

Target: scaffold0202; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 48 - 127
Target Start/End: Complemental strand, 14595 - 14516
Alignment:
Q  48 tgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatttaa 127  Q
    ||||| |||||||||||||| ||||| ||| |||  ||||||||||| | | | |||| ||||||| |||||||||||||    
T  14595 tgtaaatataggtcatttgaattttcgtccttgaagttactaatccttcaaatctgccactgtaaatattaatcatttaa 14516  T

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Target: scaffold0279 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 125
Target Start/End: Original strand, 10853 - 10953
Alignment:
Q  25 ggcttaaatatgcatttcatccatgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcatt 124  Q
    |||||||||| |  |||| ||| || || |||||||||||||| ||||| |||  ||  ||||||||||| ||||||||||  || ||| ||||||||||    
T  10853 ggcttaaataggtctttcgtccctgcaaatataggtcatttgaattttcgtccacgaagttactaatccttccattttgccattgcaaatattaatcatt 10952  T
Q  125 t 125  Q
    |    
T  10953 t 10953  T

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