View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14906_low_5 (Length: 344)
Name: NF14906_low_5
Description: NF14906
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14906_low_5 |
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Alignment Details
Target: chr1 (Bit Score: 305; Significance: 1e-172; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 305; E-Value: 1e-172
Query Start/End: Original strand, 16 - 328
Target Start/End: Original strand, 6622214 - 6622526
Alignment:
| Q |
16 |
aataatgattggtataaacaaatcgagagtaagaaaacttttgtattaaagaaccaactgttaaaaaaccttgctactccgtcgacccaaaataggattg |
115 |
Q |
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| T |
6622214 |
aataatgattggtataaacaaatcgagagtaagaaaacttttgtattaaagaaccaactgttaaaaaaccttgctactccgtcgacccaaaataggattg |
6622313 |
T |
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| Q |
116 |
tctcctcttgtaggatatagttgtggatttcatccaaaacaaaagccaatgacattggtgcataaaatatgtatagtatatacaaaaactgcaaaagcaa |
215 |
Q |
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| T |
6622314 |
tctcctcttgtaggatatagttgtggatttcatccaaaacaaaagccaatgacattggtgcataaaatatgtatagtatatacaaaaactgcaaaagcaa |
6622413 |
T |
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| Q |
216 |
ctgtatcagttagccgaaactctatggtttcacctctccaagcttaaacttttactgatgctgggtgatattctctgttgcatatcatttgcctgtattt |
315 |
Q |
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| T |
6622414 |
ctgtatcagttagccgaaactctatggtttcacctctccaagcttaaactcttattgatgctgggtgatattctctgttgcatatcatttgcctgtattt |
6622513 |
T |
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| Q |
316 |
tcaataagctaga |
328 |
Q |
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| T |
6622514 |
tcaataagctaga |
6622526 |
T |
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