View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14906_low_6 (Length: 293)
Name: NF14906_low_6
Description: NF14906
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14906_low_6 |
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Alignment Details
Target: chr2 (Bit Score: 269; Significance: 1e-150; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 1 - 284
Target Start/End: Complemental strand, 12875964 - 12875680
Alignment:
| Q |
1 |
tcttaagtcatctaatagttggtaggtttatcatgccttacgatatcacacaaggctcaaggacaaactcaaacatatcttaaaaacaacttttcatcaa |
100 |
Q |
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| T |
12875964 |
tcttaagtcatctaatagttggtaggtttatcatgccttacgatatcacacaaggctcaaggacaaactcaaacatatctttaaaacaacttttcatcaa |
12875865 |
T |
|
| Q |
101 |
aggcaccatta-ggttgaccttattaaaagggacccttggccatttaattcccaaaagaatggtcctaaaccttcttgattagcaagttgttgaccacat |
199 |
Q |
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||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
12875864 |
aggcaccattaaggttgaccttattaaaagggacccttggccatttaattcccaaaagaatggtcctaaaccttcttgattagcaagttgttgaccacat |
12875765 |
T |
|
| Q |
200 |
gtatgtcatcgtcaatacagtttataacacactttctcttctcaccttctcaacgtgaatttttattatatttcttggtcctttg |
284 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
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| T |
12875764 |
gtatgtcatcgtcaatacagtttataacacactttctcttctcaccttctcaacatgaatttttattatatttcttggtcctttg |
12875680 |
T |
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