View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14907_low_16 (Length: 302)
Name: NF14907_low_16
Description: NF14907
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14907_low_16 |
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Alignment Details
Target: chr2 (Bit Score: 258; Significance: 1e-144; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 258; E-Value: 1e-144
Query Start/End: Original strand, 20 - 293
Target Start/End: Original strand, 38691263 - 38691536
Alignment:
| Q |
20 |
gattcctcataacaatttcagtgtaaattgcactctttgtactgtttcaatgaataaataaacagaagagaatttccacaattttgttgctatcaatttt |
119 |
Q |
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| T |
38691263 |
gattcctcataacaatatcagtgtaaattgcactctttgtactgtttcaatgaataaataaacagaagcgaatttccacaattttgttgctatcaatttt |
38691362 |
T |
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| Q |
120 |
tcggttagtatattaacaacatttgcatccatgagatcttattgtatatatcaatcccatttaaagacaacatatgacttgctttgtctttaacccccaa |
219 |
Q |
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| T |
38691363 |
tcggttagtatattaacaacatttgcatacatgagatcttattgtatatatcaatcccatttaaagacaacatatgacttgctttgtctttaacccctaa |
38691462 |
T |
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| Q |
220 |
acctgttaagtgtaacatgaagggtcaatttaatgttaaaattgtaccatctaatattcaatgacaagtattat |
293 |
Q |
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| T |
38691463 |
acctgttaagtgtaacatgaagggtcaatttaatgttaaaattgtaccatctaatattcaatgacaagtattat |
38691536 |
T |
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