View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14907_low_21 (Length: 251)
Name: NF14907_low_21
Description: NF14907
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14907_low_21 |
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Alignment Details
Target: chr5 (Bit Score: 117; Significance: 1e-59; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 17227408 - 17227276
Alignment:
| Q |
1 |
cctcttcactct-ttctccaaatttaattttaatatcataccttagcaacattacaaaaaacatataaccacttttatttatttctctcttaataaatac |
99 |
Q |
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| T |
17227408 |
cctcttcactctcttcgccaaatttaattttattatcataccttagcaacattacaaaaaacatataaccacttttatttatttctctcttaataaatac |
17227309 |
T |
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| Q |
100 |
tattcccttactctccatactcatttcacataa |
132 |
Q |
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||||||||||||||||||||||||||||||||| |
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| T |
17227308 |
tattcccttactctccatactcatttcacataa |
17227276 |
T |
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