View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14908_low_5 (Length: 323)
Name: NF14908_low_5
Description: NF14908
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14908_low_5 |
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Alignment Details
Target: chr5 (Bit Score: 295; Significance: 1e-166; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 295; E-Value: 1e-166
Query Start/End: Original strand, 1 - 307
Target Start/End: Original strand, 4264768 - 4265074
Alignment:
| Q |
1 |
gaacaacatgacacaaacaaaaccaacttggtgcttaaaattatgttccatcatgttcaatgacaaaatgtcaagcacaaagaagagagaaattcaagga |
100 |
Q |
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| T |
4264768 |
gaacaacatgacacaaataaaaccaatttggtgcttaaaattatgttccatcatgttcaatgacaaaatgtcaagcacaaagaagagagaaattcaagga |
4264867 |
T |
|
| Q |
101 |
attatttaggatgctaaatgtaagagaaactaaaaataactatgaataagagaagggtttatgggatggaaagcaaataaagatagagagtcatatttat |
200 |
Q |
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|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4264868 |
attatttaggatactaaatgtaagagaaactaaaaataactatgaataagagaagggtttatgggatggaaagcaaataaagatagagagtcatatttat |
4264967 |
T |
|
| Q |
201 |
agtacaaacttgaggtccatttactgaagtaagtaagtagtaaccaattaattctttgttcccttccacttggaactatgaaattagatgaagattggaa |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4264968 |
agtacaaacttgaggtccatttactgaagtaagtaagtagtaaccaattaattctttgttcccttccacttggaactatgaaattagatgaagattggaa |
4265067 |
T |
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| Q |
301 |
taatgat |
307 |
Q |
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||||||| |
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| T |
4265068 |
taatgat |
4265074 |
T |
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