View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1490_high_21 (Length: 343)

Name: NF1490_high_21
Description: NF1490
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1490_high_21
NF1490_high_21
[»] chr7 (51 HSPs)
chr7 (13-335)||(11516327-11516649)
chr7 (13-335)||(30261969-30262292)
chr7 (13-335)||(15441404-15441727)
chr7 (13-335)||(7293116-7293439)
chr7 (44-335)||(25292179-25292470)
chr7 (134-335)||(14113829-14114031)
chr7 (134-335)||(14423480-14423681)
chr7 (79-335)||(13321182-13321441)
chr7 (45-304)||(47480902-47481162)
chr7 (44-307)||(16211897-16212148)
chr7 (44-307)||(11580616-11580871)
chr7 (44-308)||(13036892-13037146)
chr7 (44-307)||(36052795-36053048)
chr7 (44-170)||(18253841-18253967)
chr7 (44-141)||(16478985-16479082)
chr7 (48-176)||(3060101-3060229)
chr7 (44-142)||(13572808-13572906)
chr7 (228-335)||(13758675-13758783)
chr7 (44-164)||(10989541-10989661)
chr7 (52-142)||(13911046-13911136)
chr7 (45-142)||(2437590-2437687)
chr7 (230-307)||(42056143-42056220)
chr7 (230-305)||(2029244-2029319)
chr7 (230-305)||(3049905-3049980)
chr7 (48-177)||(295965-296094)
chr7 (230-307)||(25124450-25124527)
chr7 (230-307)||(2190040-2190117)
chr7 (228-305)||(15927873-15927950)
chr7 (228-305)||(18979895-18979972)
chr7 (186-308)||(15759985-15760106)
chr7 (231-304)||(10000245-10000318)
chr7 (228-305)||(13572979-13573056)
chr7 (230-307)||(15709469-15709546)
chr7 (194-304)||(371380-371491)
chr7 (186-271)||(14250806-14250890)
chr7 (228-303)||(15950667-15950742)
chr7 (67-160)||(16914928-16915023)
chr7 (230-307)||(36024452-36024530)
chr7 (80-170)||(48622664-48622754)
chr7 (231-304)||(48622541-48622614)
chr7 (230-262)||(126738-126770)
chr7 (194-261)||(7823001-7823066)
chr7 (194-261)||(7830312-7830377)
chr7 (230-258)||(15516765-15516793)
chr7 (259-307)||(17817315-17817363)
chr7 (259-307)||(19049638-19049686)
chr7 (194-261)||(27101555-27101620)
chr7 (194-261)||(27108903-27108968)
chr7 (194-261)||(27176706-27176771)
chr7 (230-262)||(32493946-32493978)
chr7 (194-261)||(38783647-38783712)
[»] chr3 (57 HSPs)
chr3 (13-335)||(2449079-2449401)
chr3 (19-307)||(17912353-17912639)
chr3 (29-335)||(13954730-13955036)
chr3 (44-335)||(45860937-45861228)
chr3 (44-244)||(13975654-13975853)
chr3 (21-176)||(16744115-16744270)
chr3 (52-335)||(15614973-15615243)
chr3 (79-307)||(11986035-11986263)
chr3 (44-176)||(51158018-51158150)
chr3 (44-308)||(14842441-14842693)
chr3 (44-177)||(15859023-15859156)
chr3 (44-176)||(12030147-12030279)
chr3 (44-307)||(13839025-13839277)
chr3 (44-170)||(15936633-15936759)
chr3 (44-176)||(2049941-2050073)
chr3 (44-170)||(15938475-15938601)
chr3 (230-305)||(38168237-38168312)
chr3 (80-307)||(54651625-54651841)
chr3 (29-142)||(16821256-16821369)
chr3 (44-164)||(55316351-55316471)
chr3 (150-335)||(8268575-8268762)
chr3 (150-335)||(8275675-8275862)
chr3 (230-305)||(33342204-33342279)
chr3 (230-304)||(2050115-2050189)
chr3 (230-307)||(53771365-53771442)
chr3 (230-314)||(23492696-23492780)
chr3 (44-164)||(41270207-41270327)
chr3 (230-307)||(12030028-12030105)
chr3 (230-307)||(16261777-16261854)
chr3 (114-177)||(19231982-19232045)
chr3 (230-300)||(19260711-19260781)
chr3 (230-307)||(30153265-30153342)
chr3 (230-304)||(14285289-14285363)
chr3 (230-304)||(54685159-54685233)
chr3 (230-303)||(28558494-28558567)
chr3 (230-304)||(19947026-19947100)
chr3 (230-303)||(51960990-51961063)
chr3 (228-308)||(18896915-18896995)
chr3 (228-304)||(18911298-18911374)
chr3 (225-308)||(5228614-5228697)
chr3 (150-304)||(11477053-11477208)
chr3 (106-160)||(14080701-14080756)
chr3 (230-263)||(16933868-16933901)
chr3 (230-262)||(17955884-17955916)
chr3 (228-303)||(12264668-12264743)
chr3 (229-308)||(25059045-25059124)
chr3 (130-176)||(19260823-19260869)
chr3 (228-273)||(15468246-15468291)
chr3 (186-261)||(49232700-49232774)
chr3 (194-261)||(1467657-1467722)
chr3 (230-262)||(2844514-2844546)
chr3 (230-262)||(3992873-3992905)
chr3 (259-307)||(5240584-5240632)
chr3 (230-262)||(15857163-15857195)
chr3 (230-262)||(19232089-19232121)
chr3 (230-262)||(54038024-54038056)
chr3 (230-262)||(55513193-55513225)
[»] chr1 (25 HSPs)
chr1 (13-335)||(51452592-51452914)
chr1 (44-335)||(45051554-45051832)
chr1 (44-335)||(2116386-2116664)
chr1 (29-307)||(20931461-20931727)
chr1 (44-307)||(20913161-20913412)
chr1 (44-307)||(20893506-20893758)
chr1 (80-307)||(37844329-37844546)
chr1 (44-176)||(41394353-41394485)
chr1 (80-307)||(20445846-20446064)
chr1 (80-307)||(20531611-20531828)
chr1 (45-329)||(22227941-22228215)
chr1 (231-335)||(7640777-7640882)
chr1 (45-126)||(22232638-22232719)
chr1 (44-142)||(18601140-18601238)
chr1 (226-335)||(46523691-46523801)
chr1 (231-335)||(22035755-22035860)
chr1 (44-164)||(5072388-5072508)
chr1 (230-262)||(41394527-41394559)
chr1 (230-261)||(15861327-15861358)
chr1 (228-305)||(5072260-5072337)
chr1 (186-261)||(19962417-19962491)
chr1 (150-203)||(20254551-20254604)
chr1 (194-261)||(17004911-17004976)
chr1 (230-262)||(21860334-21860366)
chr1 (230-262)||(44034871-44034903)
[»] chr8 (45 HSPs)
chr8 (13-335)||(5238187-5238510)
chr8 (13-335)||(24661088-24661411)
chr8 (13-335)||(43685646-43685969)
chr8 (19-335)||(22907054-22907371)
chr8 (44-335)||(17345700-17345993)
chr8 (44-307)||(43373347-43373600)
chr8 (44-176)||(16193716-16193848)
chr8 (44-307)||(24928671-24928923)
chr8 (44-176)||(16404975-16405107)
chr8 (44-164)||(6774258-6774378)
chr8 (44-142)||(21844594-21844692)
chr8 (44-164)||(24549113-24549233)
chr8 (44-142)||(21851987-21852085)
chr8 (230-307)||(24385607-24385684)
chr8 (228-335)||(16872894-16873002)
chr8 (44-164)||(30120854-30120974)
chr8 (44-164)||(16674392-16674512)
chr8 (230-307)||(16193598-16193674)
chr8 (230-307)||(41506664-41506741)
chr8 (231-307)||(7000475-7000551)
chr8 (229-304)||(21494314-21494389)
chr8 (230-304)||(22886654-22886728)
chr8 (228-304)||(13662140-13662216)
chr8 (228-304)||(13720803-13720879)
chr8 (150-304)||(2545184-2545339)
chr8 (194-304)||(3431134-3431245)
chr8 (150-203)||(18612644-18612697)
chr8 (150-203)||(22147676-22147729)
chr8 (29-101)||(222754-222826)
chr8 (29-101)||(736377-736449)
chr8 (29-101)||(860272-860344)
chr8 (228-308)||(22006129-22006209)
chr8 (230-262)||(24716762-24716794)
chr8 (67-160)||(26011646-26011741)
chr8 (44-101)||(691909-691966)
chr8 (228-273)||(16674296-16674341)
chr8 (194-261)||(271278-271343)
chr8 (230-262)||(274766-274798)
chr8 (230-262)||(641051-641083)
chr8 (194-261)||(644577-644642)
chr8 (230-262)||(826857-826889)
chr8 (194-261)||(830312-830377)
chr8 (194-261)||(15319077-15319142)
chr8 (194-261)||(15499446-15499511)
chr8 (228-264)||(24549283-24549319)
[»] chr5 (51 HSPs)
chr5 (13-335)||(20623069-20623392)
chr5 (13-335)||(21233368-21233691)
chr5 (13-335)||(16536297-16536620)
chr5 (13-335)||(37052844-37053167)
chr5 (13-335)||(25900246-25900568)
chr5 (44-304)||(34939408-34939669)
chr5 (44-176)||(23507096-23507228)
chr5 (45-175)||(18531068-18531198)
chr5 (44-307)||(27182426-27182679)
chr5 (79-335)||(32950861-32951119)
chr5 (44-175)||(22053834-22053965)
chr5 (44-164)||(29188284-29188404)
chr5 (46-142)||(27009975-27010071)
chr5 (228-335)||(1219363-1219471)
chr5 (196-307)||(23981360-23981471)
chr5 (231-335)||(23328865-23328970)
chr5 (231-335)||(24616469-24616574)
chr5 (231-335)||(24712845-24712950)
chr5 (231-335)||(24745863-24745968)
chr5 (29-164)||(22366481-22366616)
chr5 (44-142)||(43443417-43443515)
chr5 (29-142)||(4200007-4200120)
chr5 (29-142)||(18778014-18778127)
chr5 (44-164)||(19500031-19500151)
chr5 (44-164)||(25426760-25426880)
chr5 (230-307)||(21651018-21651095)
chr5 (44-164)||(12506-12626)
chr5 (44-164)||(21073595-21073715)
chr5 (232-307)||(2032135-2032210)
chr5 (194-307)||(108683-108797)
chr5 (186-335)||(23514825-23514974)
chr5 (228-335)||(35790941-35791049)
chr5 (230-308)||(23507270-23507348)
chr5 (150-304)||(17909743-17909897)
chr5 (230-307)||(21205249-21205325)
chr5 (230-303)||(25005137-25005210)
chr5 (230-301)||(7529228-7529299)
chr5 (230-273)||(16105967-16106010)
chr5 (232-307)||(18530943-18531018)
chr5 (228-305)||(7425629-7425706)
chr5 (230-303)||(11343008-11343081)
chr5 (230-307)||(22053708-22053785)
chr5 (228-305)||(27010144-27010221)
chr5 (194-261)||(36989688-36989753)
chr5 (194-304)||(9730236-9730347)
chr5 (63-160)||(21310709-21310808)
chr5 (186-261)||(11211983-11212057)
chr5 (80-160)||(29918131-29918212)
chr5 (194-261)||(21932299-21932364)
chr5 (194-261)||(21938469-21938534)
chr5 (194-261)||(35582309-35582374)
[»] chr2 (43 HSPs)
chr2 (13-335)||(19689241-19689564)
chr2 (13-335)||(23820171-23820494)
chr2 (13-335)||(14906280-14906603)
chr2 (13-335)||(20015111-20015434)
chr2 (44-335)||(17396493-17396784)
chr2 (44-335)||(25265228-25265522)
chr2 (45-263)||(7507756-7507975)
chr2 (45-307)||(462870-463120)
chr2 (44-307)||(36982319-36982573)
chr2 (44-307)||(8891373-8891626)
chr2 (44-177)||(19794703-19794836)
chr2 (44-176)||(20627313-20627445)
chr2 (44-175)||(24341390-24341521)
chr2 (44-175)||(43642958-43643089)
chr2 (228-335)||(12641485-12641593)
chr2 (228-335)||(12635711-12635819)
chr2 (228-335)||(12728697-12728805)
chr2 (228-335)||(34824780-34824888)
chr2 (225-335)||(23774438-23774549)
chr2 (228-335)||(3798446-3798554)
chr2 (228-331)||(8944151-8944255)
chr2 (230-305)||(9652753-9652828)
chr2 (230-307)||(22863235-22863312)
chr2 (44-164)||(19886661-19886781)
chr2 (194-304)||(33128335-33128446)
chr2 (230-307)||(21273904-21273980)
chr2 (230-307)||(24341264-24341341)
chr2 (231-307)||(32466177-32466252)
chr2 (228-308)||(16935898-16935978)
chr2 (228-308)||(17006558-17006638)
chr2 (229-304)||(28031092-28031167)
chr2 (228-273)||(42177875-42177920)
chr2 (230-262)||(22284278-22284310)
chr2 (194-304)||(17204622-17204733)
chr2 (230-261)||(25213372-25213403)
chr2 (231-304)||(21142203-21142276)
chr2 (194-261)||(11231256-11231321)
chr2 (230-262)||(19794629-19794661)
chr2 (230-262)||(20627238-20627270)
chr2 (230-262)||(22275045-22275077)
chr2 (194-261)||(22513103-22513168)
chr2 (194-261)||(24685699-24685764)
chr2 (194-261)||(28775725-28775790)
[»] scaffold0124 (1 HSPs)
scaffold0124 (13-335)||(1423-1745)
[»] scaffold0141 (2 HSPs)
scaffold0141 (13-335)||(22640-22963)
scaffold0141 (13-335)||(26895-27218)
[»] scaffold0078 (1 HSPs)
scaffold0078 (19-335)||(36906-37223)
[»] chr4 (44 HSPs)
chr4 (13-335)||(16327766-16328089)
chr4 (19-335)||(26680306-26680623)
chr4 (13-335)||(10488662-10488985)
chr4 (29-332)||(13048064-13048368)
chr4 (201-335)||(16608939-16609074)
chr4 (44-307)||(13246561-13246814)
chr4 (44-307)||(122020-122271)
chr4 (44-175)||(15675090-15675221)
chr4 (44-175)||(10104251-10104382)
chr4 (44-177)||(54118243-54118376)
chr4 (29-142)||(10644336-10644449)
chr4 (228-335)||(20001028-20001136)
chr4 (48-148)||(31115764-31115864)
chr4 (231-335)||(26339327-26339432)
chr4 (103-175)||(33240890-33240962)
chr4 (230-307)||(15135862-15135939)
chr4 (230-307)||(15272166-15272243)
chr4 (29-164)||(47357771-47357906)
chr4 (231-307)||(55376449-55376525)
chr4 (51-303)||(40885418-40885680)
chr4 (230-305)||(14952085-14952160)
chr4 (229-304)||(32460561-32460636)
chr4 (230-307)||(15674964-15675041)
chr4 (150-263)||(9795454-9795566)
chr4 (230-307)||(10104125-10104202)
chr4 (228-305)||(15287119-15287196)
chr4 (228-305)||(15294228-15294305)
chr4 (228-304)||(7131940-7132016)
chr4 (225-273)||(17145563-17145611)
chr4 (194-304)||(8045235-8045346)
chr4 (230-300)||(14500074-14500144)
chr4 (150-304)||(14996365-14996519)
chr4 (150-304)||(19697236-19697390)
chr4 (150-304)||(19707821-19707975)
chr4 (231-305)||(22351938-22352012)
chr4 (233-307)||(31132628-31132702)
chr4 (44-177)||(7850131-7850264)
chr4 (224-265)||(7850308-7850349)
chr4 (231-304)||(22738577-22738650)
chr4 (230-307)||(33241011-33241088)
chr4 (228-308)||(47357956-47358035)
chr4 (194-263)||(16523109-16523179)
chr4 (232-273)||(18248527-18248568)
chr4 (230-262)||(54118168-54118200)
[»] scaffold0772 (1 HSPs)
scaffold0772 (44-335)||(5660-5951)
[»] scaffold0132 (1 HSPs)
scaffold0132 (29-296)||(13622-13890)
[»] chr6 (39 HSPs)
chr6 (44-308)||(1657615-1657880)
chr6 (44-308)||(15862602-15862867)
chr6 (44-300)||(35009314-35009571)
chr6 (44-335)||(1649947-1650225)
chr6 (93-307)||(27751605-27751819)
chr6 (44-307)||(23153578-23153831)
chr6 (45-176)||(14626118-14626249)
chr6 (79-307)||(29666040-29666258)
chr6 (228-335)||(23978074-23978182)
chr6 (230-307)||(23995247-23995324)
chr6 (29-136)||(25175680-25175787)
chr6 (29-164)||(27653983-27654118)
chr6 (230-307)||(23148303-23148380)
chr6 (150-304)||(16299844-16299998)
chr6 (232-304)||(15742078-15742150)
chr6 (39-164)||(16825752-16825879)
chr6 (228-335)||(19610323-19610431)
chr6 (230-304)||(32276617-32276691)
chr6 (230-304)||(18002353-18002427)
chr6 (228-305)||(16232197-16232274)
chr6 (186-308)||(1556269-1556390)
chr6 (194-304)||(18823241-18823352)
chr6 (194-304)||(18839096-18839207)
chr6 (230-304)||(26090059-26090133)
chr6 (150-203)||(19629568-19629621)
chr6 (61-160)||(29605596-29605696)
chr6 (230-261)||(4991396-4991427)
chr6 (67-160)||(18629608-18629703)
chr6 (231-305)||(29869650-29869724)
chr6 (228-305)||(18086697-18086774)
chr6 (186-261)||(19299501-19299575)
chr6 (194-261)||(10488972-10489037)
chr6 (194-261)||(16376291-16376356)
chr6 (194-261)||(16383615-16383680)
chr6 (194-261)||(16556057-16556122)
chr6 (194-261)||(16632613-16632678)
chr6 (63-142)||(17083216-17083296)
chr6 (230-262)||(19983192-19983224)
chr6 (230-262)||(35015057-35015089)
[»] scaffold0162 (3 HSPs)
scaffold0162 (44-303)||(8051-8312)
scaffold0162 (46-307)||(26295-26545)
scaffold0162 (156-308)||(11989-12141)
[»] scaffold0125 (1 HSPs)
scaffold0125 (45-304)||(41780-42039)
[»] scaffold0075 (1 HSPs)
scaffold0075 (46-263)||(34372-34590)
[»] scaffold0266 (3 HSPs)
scaffold0266 (44-307)||(3463-3714)
scaffold0266 (44-176)||(1255-1387)
scaffold0266 (230-307)||(1430-1507)
[»] scaffold0049 (1 HSPs)
scaffold0049 (44-304)||(48318-48578)
[»] scaffold0175 (2 HSPs)
scaffold0175 (29-176)||(956-1103)
scaffold0175 (225-273)||(871-919)
[»] scaffold0302 (1 HSPs)
scaffold0302 (29-307)||(12229-12495)
[»] scaffold0195 (2 HSPs)
scaffold0195 (44-177)||(19337-19470)
scaffold0195 (44-176)||(21421-21553)
[»] scaffold0008 (2 HSPs)
scaffold0008 (44-304)||(128053-128301)
scaffold0008 (52-142)||(31697-31787)
[»] scaffold0413 (1 HSPs)
scaffold0413 (44-308)||(5944-6196)
[»] scaffold0012 (2 HSPs)
scaffold0012 (44-307)||(247321-247574)
scaffold0012 (186-308)||(34029-34150)
[»] scaffold0077 (2 HSPs)
scaffold0077 (29-177)||(36912-37060)
scaffold0077 (230-307)||(36789-36869)
[»] scaffold0023 (5 HSPs)
scaffold0023 (44-176)||(48729-48861)
scaffold0023 (29-142)||(36210-36323)
scaffold0023 (228-308)||(153878-153958)
scaffold0023 (230-263)||(48903-48936)
scaffold0023 (194-263)||(61121-61191)
[»] scaffold0018 (1 HSPs)
scaffold0018 (44-307)||(51063-51314)
[»] scaffold0025 (4 HSPs)
scaffold0025 (44-175)||(8980-9111)
scaffold0025 (44-173)||(148852-148981)
scaffold0025 (230-307)||(146906-146983)
scaffold0025 (230-307)||(9160-9237)
[»] scaffold0498 (1 HSPs)
scaffold0498 (44-307)||(9009-9260)
[»] scaffold0028 (4 HSPs)
scaffold0028 (44-307)||(89333-89586)
scaffold0028 (230-307)||(107663-107740)
scaffold0028 (125-177)||(107783-107835)
scaffold0028 (230-303)||(130880-130953)
[»] scaffold0011 (2 HSPs)
scaffold0011 (44-177)||(123163-123296)
scaffold0011 (230-307)||(123042-123119)
[»] scaffold0001 (3 HSPs)
scaffold0001 (29-307)||(172021-172287)
scaffold0001 (29-307)||(177724-177990)
scaffold0001 (150-304)||(164829-164983)
[»] scaffold1542 (1 HSPs)
scaffold1542 (74-177)||(533-636)
[»] scaffold0361 (1 HSPs)
scaffold0361 (83-304)||(3360-3578)
[»] scaffold0218 (1 HSPs)
scaffold0218 (44-177)||(5060-5193)
[»] scaffold0106 (2 HSPs)
scaffold0106 (44-176)||(41860-41992)
scaffold0106 (230-307)||(42034-42111)
[»] scaffold0084 (1 HSPs)
scaffold0084 (79-305)||(55970-56196)
[»] scaffold0026 (4 HSPs)
scaffold0026 (44-170)||(107878-108004)
scaffold0026 (44-119)||(64573-64648)
scaffold0026 (119-161)||(89863-89905)
scaffold0026 (228-305)||(64395-64472)
[»] scaffold0420 (1 HSPs)
scaffold0420 (44-142)||(13347-13445)
[»] scaffold0215 (4 HSPs)
scaffold0215 (44-142)||(9371-9469)
scaffold0215 (44-142)||(16269-16367)
scaffold0215 (228-304)||(9223-9299)
scaffold0215 (228-304)||(16121-16197)
[»] scaffold0116 (2 HSPs)
scaffold0116 (44-142)||(167-265)
scaffold0116 (228-308)||(336-416)
[»] scaffold0009 (1 HSPs)
scaffold0009 (29-307)||(272141-272407)
[»] scaffold0076 (2 HSPs)
scaffold0076 (29-141)||(43114-43226)
scaffold0076 (194-261)||(39376-39441)
[»] scaffold0529 (1 HSPs)
scaffold0529 (44-327)||(3094-3366)
[»] scaffold0022 (1 HSPs)
scaffold0022 (45-126)||(5254-5335)
[»] scaffold0597 (1 HSPs)
scaffold0597 (230-305)||(835-910)
[»] scaffold0465 (1 HSPs)
scaffold0465 (230-305)||(9839-9914)
[»] scaffold0139 (2 HSPs)
scaffold0139 (44-142)||(14083-14181)
scaffold0139 (47-142)||(21138-21233)
[»] scaffold0066 (3 HSPs)
scaffold0066 (79-307)||(45197-45415)
scaffold0066 (207-307)||(54701-54801)
scaffold0066 (79-126)||(54583-54630)
[»] scaffold1711 (1 HSPs)
scaffold1711 (44-164)||(1304-1424)
[»] scaffold0032 (3 HSPs)
scaffold0032 (230-308)||(108029-108107)
scaffold0032 (230-307)||(55904-55981)
scaffold0032 (150-263)||(13266-13378)
[»] scaffold0251 (1 HSPs)
scaffold0251 (230-307)||(13240-13317)
[»] scaffold0004 (1 HSPs)
scaffold0004 (230-307)||(193352-193429)
[»] scaffold0467 (1 HSPs)
scaffold0467 (79-308)||(10210-10428)
[»] scaffold0158 (1 HSPs)
scaffold0158 (231-307)||(25532-25608)
[»] scaffold0234 (1 HSPs)
scaffold0234 (230-305)||(17261-17336)
[»] scaffold0369 (1 HSPs)
scaffold0369 (45-126)||(3854-3936)
[»] scaffold0160 (1 HSPs)
scaffold0160 (231-305)||(339-413)
[»] scaffold0706 (1 HSPs)
scaffold0706 (230-307)||(6398-6475)
[»] scaffold0058 (2 HSPs)
scaffold0058 (230-307)||(57347-57424)
scaffold0058 (107-160)||(70307-70361)
[»] scaffold0761 (1 HSPs)
scaffold0761 (186-308)||(1446-1567)
[»] scaffold0118 (1 HSPs)
scaffold0118 (230-304)||(34266-34340)
[»] scaffold0039 (1 HSPs)
scaffold0039 (230-307)||(12373-12450)
[»] scaffold0037 (1 HSPs)
scaffold0037 (229-304)||(95297-95372)
[»] scaffold0207 (1 HSPs)
scaffold0207 (230-304)||(18026-18100)
[»] scaffold0029 (1 HSPs)
scaffold0029 (158-304)||(49710-49856)
[»] scaffold0173 (1 HSPs)
scaffold0173 (229-304)||(5548-5623)
[»] scaffold0335 (1 HSPs)
scaffold0335 (230-304)||(5434-5508)
[»] scaffold0383 (1 HSPs)
scaffold0383 (228-303)||(2698-2773)
[»] scaffold0303 (1 HSPs)
scaffold0303 (230-304)||(4304-4378)
[»] scaffold0183 (1 HSPs)
scaffold0183 (231-305)||(6905-6979)
[»] scaffold1500 (1 HSPs)
scaffold1500 (228-273)||(1420-1465)
[»] scaffold0123 (1 HSPs)
scaffold0123 (80-160)||(8176-8257)
[»] scaffold0034 (1 HSPs)
scaffold0034 (230-262)||(80187-80219)
[»] scaffold0409 (2 HSPs)
scaffold0409 (63-160)||(1348-1447)
scaffold0409 (63-160)||(9603-9702)
[»] scaffold0367 (1 HSPs)
scaffold0367 (194-264)||(17207-17278)
[»] scaffold0191 (1 HSPs)
scaffold0191 (226-273)||(7362-7409)
[»] scaffold0516 (1 HSPs)
scaffold0516 (231-304)||(12002-12075)
[»] scaffold0456 (2 HSPs)
scaffold0456 (119-160)||(1546-1587)
scaffold0456 (119-160)||(8691-8732)
[»] scaffold0213 (1 HSPs)
scaffold0213 (186-261)||(29426-29500)
[»] scaffold0483 (1 HSPs)
scaffold0483 (80-159)||(6827-6907)
[»] scaffold0387 (1 HSPs)
scaffold0387 (150-202)||(7127-7179)
[»] scaffold0107 (1 HSPs)
scaffold0107 (194-261)||(31582-31647)
[»] scaffold0013 (1 HSPs)
scaffold0013 (245-305)||(154305-154365)


Alignment Details
Target: chr7 (Bit Score: 307; Significance: 1e-173; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 307; E-Value: 1e-173
Query Start/End: Original strand, 13 - 335
Target Start/End: Original strand, 11516327 - 11516649
Alignment:
Q  13 tcaagaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattat 112  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11516327 tcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattat 11516426  T
Q  113 tatcaattcatgcatacaaacatatcatcaaagttgtagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaa 212  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  11516427 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccattcattcatttcaacccatttcatccaaatcatgaaa 11516526  T
Q  213 aattgcaatgaatgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctttccc 312  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11516527 aattgcaaagaatgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctttccc 11516626  T
Q  313 aatggattcttcaagttcttctc 335  Q
    |||||||||||||||||||||||    
T  11516627 aatggattcttcaagttcttctc 11516649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 304; E-Value: 1e-171
Query Start/End: Original strand, 13 - 335
Target Start/End: Complemental strand, 30262292 - 30261969
Alignment:
Q  13 tcaagaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattat 112  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30262292 tcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattat 30262193  T
Q  113 tatcaattcatgcatacaaacatatcatcaaagttgtagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaa 212  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30262192 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaa 30262093  T
Q  213 aattgcaatgaatgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctttccc 312  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30262092 aattgcaaagaatgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctttccc 30261993  T
Q  313 aa-tggattcttcaagttcttctc 335  Q
    || |||||||||||||||||||||    
T  30261992 aattggattcttcaagttcttctc 30261969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 300; E-Value: 1e-169
Query Start/End: Original strand, 13 - 335
Target Start/End: Complemental strand, 15441727 - 15441404
Alignment:
Q  13 tcaagaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattat 112  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15441727 tcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattat 15441628  T
Q  113 tatcaattcatgcatacaaacatatcatcaaagttgtagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaa 212  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  15441627 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccattcattcatttcaacccatttcatccaaatcatgaaa 15441528  T
Q  213 aattgcaatgaatgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctttccc 312  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15441527 aattgcaaagaatgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctttccc 15441428  T
Q  313 aa-tggattcttcaagttcttctc 335  Q
    || |||||||||||||||||||||    
T  15441427 aattggattcttcaagttcttctc 15441404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 296; E-Value: 1e-166
Query Start/End: Original strand, 13 - 335
Target Start/End: Original strand, 7293116 - 7293439
Alignment:
Q  13 tcaagaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattat 112  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7293116 tcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattat 7293215  T
Q  113 tatcaattcatgcatacaaacatatcatcaaagttgtagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaa 212  Q
    ||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7293216 tattaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaa 7293315  T
Q  213 aattgcaatgaatgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctttccc 312  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  7293316 aattgcaaagaatgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagcttaccc 7293415  T
Q  313 aa-tggattcttcaagttcttctc 335  Q
    || |||||||||||||||||||||    
T  7293416 aattggattcttcaagttcttctc 7293439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 44 - 335
Target Start/End: Complemental strand, 25292470 - 25292179
Alignment:
Q  44 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 143  Q
    ||||||| |||||| ||| || |||| ||||||||||||||||||||| ||||||||||||||||| || | |||||||| |||||||||||||||||||    
T  25292470 gcacaatattcatagcttatcctttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcaacaattcatacatacaaacatatcatcaa 25292371  T
Q  144 agttgtagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaaattgcaatgaatgaacatgattatgataaa 243  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| |||||||||||||    
T  25292370 agttggagcacaaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcttgaaaaattgcaaagaatgaacttgattatgataaa 25292271  T
Q  244 gactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctttcccaatggattcttcaagttcttctc 335  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| |||||||||||||    
T  25292270 gactaacccccttatcttagatgaagattagaccaaacctaggcttcaatttagctcctaagcttacccaattgattcctcaagttcttctc 25292179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 134 - 335
Target Start/End: Complemental strand, 14114031 - 14113829
Alignment:
Q  134 atatcatcaaagttgtagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaaattgcaatgaatgaacatga 233  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  14114031 atatcatcaaagttggagcacgaatttagcaacaattatccattcattcatttcaacccatttcatccaaatcatgaaaaattgcaaagaatgaacatga 14113932  T
Q  234 ttatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctttcccaa-tggattcttcaagttctt 332  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||||    
T  14113931 ttatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcttctaagcttacccaattggattcttcaagttctt 14113832  T
Q  333 ctc 335  Q
    |||    
T  14113831 ctc 14113829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 171; E-Value: 9e-92
Query Start/End: Original strand, 134 - 335
Target Start/End: Complemental strand, 14423681 - 14423480
Alignment:
Q  134 atatcatcaaagttgtagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaaattgcaatgaatgaacatga 233  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  14423681 atatcatcaaagttggagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaaattgcaaagaatgaacatga 14423582  T
Q  234 ttatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctttcccaa-tggattcttcaagttctt 332  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||||    
T  14423581 ttatgat-aagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcttctaagcttacccaattggattcttcaagttctt 14423483  T
Q  333 ctc 335  Q
    |||    
T  14423482 ctc 14423480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 79 - 335
Target Start/End: Original strand, 13321182 - 13321441
Alignment:
Q  79 aaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttgtagcacgaatttagcaacaattatccattc 178  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||  |||||||||||||||||||||||||| |     
T  13321182 aaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacagttagagcacgaatttagcaacaattatccactt 13321281  T
Q  179 attcatttcaacccat-ttcatacaaatcatgaaaaattgcaatgaatgaacatgattatgataaagactaacccccttaccttagatgaagattagacc 277  Q
    ||||| |||||||||| |||||||||   |||| |||||||||| |||||||||||||||||| |||||||||||||||||||||||| | |||||  ||    
T  13321282 attcaattcaacccatattcatacaacaaatgagaaattgcaataaatgaacatgattatgatgaagactaacccccttaccttagataatgattaatcc 13321381  T
Q  278 aaacctaggcttcaatttagctcctaagctttccc--aatggattcttcaagttcttctc 335  Q
    |||||||||||||| |||||||||||||||| |||  | | ||||||||||| |||||||    
T  13321382 aaacctaggcttcactttagctcctaagcttaccccaatttgattcttcaagctcttctc 13321441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 45 - 304
Target Start/End: Complemental strand, 47481162 - 47480902
Alignment:
Q  45 cacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaa 144  Q
    ||||||||||| ||||| ||||||| |||||||| |||||||||||| || ||||||||||||||||| ||||||||||||||||||||||| ||||| |    
T  47481162 cacaattttcacaacttatcatttttacatatttgaacatgtaatttcactaacaatcatacaattatcatcaattcatgcatacaaacataacatcaca 47481063  T
Q  145 gttgtagcacgaatttagcaacaattatccattcattcatttcaacccat-ttcatacaaatcatgaaaaattgcaatgaatgaacatgattatgataaa 243  Q
    |||  |||||||||||||||||||||||||||| ||||| |||||||||| |||||||||   |||| |||||||||| |||||| ||||||||||| ||    
T  47481062 gttagagcacgaatttagcaacaattatccatttattcaattcaacccatattcatacaacaaatgagaaattgcaataaatgaatatgattatgatgaa 47480963  T
Q  244 gactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaa 304  Q
    |||||||||||||||||||||| | |||||  |||||| ||||||||| |||| |||||||    
T  47480962 gactaacccccttaccttagataatgattaatccaaacttaggcttcactttacctcctaa 47480902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 44 - 307
Target Start/End: Original strand, 16211897 - 16212148
Alignment:
Q  44 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 143  Q
    |||||||||||| ||||| ||||||| |||||||| |||||| ||||| || ||||||| ||||||||| |||||||||||||||||||||||||||||     
T  16211897 gcacaattttcacaacttatcatttttacatatttgaacatgcaatttcacaaacaatcttacaattatcatcaattcatgcatacaaacatatcatcac 16211996  T
Q  144 agttgtagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaaattgcaatgaatgaacatgattatgataaa 243  Q
    ||||| ||||||||||||||||||||| ||||          | | |  | |||||||||  |||   ||||| ||   |||||  ||||||||||||||    
T  16211997 agttggagcacgaatttagcaacaattgtcca----------taagcaaaattcatacaa--catttgaaatttcacaaaatgatgatgattatgataaa 16212084  T
Q  244 gactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagct 307  Q
    ||||||||||||||||||||||||||||||  || ||| |||||||||||||||||||||||||    
T  16212085 gactaacccccttaccttagatgaagattaatcccaacttaggcttcaatttagctcctaagct 16212148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 44 - 307
Target Start/End: Complemental strand, 11580871 - 11580616
Alignment:
Q  44 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 143  Q
    |||||||||||| ||||| ||||||   | ||||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| ||||     
T  11580871 gcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatattatcac 11580772  T
Q  144 agttgtagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaaattgcaatgaatgaacatgattatgataaa 243  Q
    ||||| |||||||||||||||| ||||||||||| || ||    ||   | |||||||||    |||||| || |||  |||||  ||||||||||||||    
T  11580771 agttggagcacgaatttagcaataattatccatt-atgca----aa--aaattcatacaacatttgaaaatttacaa-aaatgatgatgattatgataaa 11580680  T
Q  244 gactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagct 307  Q
    |||||| ||||||||||||||| |||||||  || ||| |||||||||||||||||||||||||    
T  11580679 gactaatccccttaccttagattaagattaatcccaacttaggcttcaatttagctcctaagct 11580616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 44 - 308
Target Start/End: Complemental strand, 13037146 - 13036892
Alignment:
Q  44 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 143  Q
    |||||||||||| ||||| ||||||   | ||||| |||||| ||||| | |||||||||||||||||| |||||||||||||||||||||||||||||     
T  13037146 gcacaattttcacaacttatcatttgttcctatttgaacatgcaatttcatcaacaatcatacaattatcatcaattcatgcatacaaacatatcatcac 13037047  T
Q  144 agttgtagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaaattgcaatgaatgaacatgattatgataaa 243  Q
    ||||| |||||||||||||||||||||||||||| || ||    ||   | |||||||||    |||||| || |||  |||||  ||||||||| | ||    
T  13037046 agttggagcacgaatttagcaacaattatccatt-atgca----aa---aattcatacaacatttgaaaatttacaa--aatgatgatgattatggtgaa 13036957  T
Q  244 gactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctt 308  Q
    |||||||||||||||||||||| |||||||  || ||| ||||||||||||||||||||||||||    
T  13036956 gactaacccccttaccttagataaagattaatcccaacttaggcttcaatttagctcctaagctt 13036892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 44 - 307
Target Start/End: Original strand, 36052795 - 36053048
Alignment:
Q  44 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 143  Q
    |||||||||||| ||||| ||||||| |||||||| |||||||||||| ||||||||||||| |||||| |||||||||||||||||||| ||||||||     
T  36052795 gcacaattttcacaacttatcatttttacatatttgaacatgtaattttaccaacaatcatataattatcatcaattcatgcatacaaacgtatcatcac 36052894  T
Q  144 agttgtagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaaattgcaatgaatgaacatgattatgataaa 243  Q
    ||||| || |  |||||||||||||||||||||| || ||    ||   | |||||||||  |||   ||||| ||   |||||  ||||||||||||||    
T  36052895 agttggagtataaatttagcaacaattatccatt-ataca----aa---aattcatacaa--catttgaaatttcacaaaatgatgatgattatgataaa 36052984  T
Q  244 gactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagct 307  Q
    |||||||||||||||||||||| |||||||  || ||| ||||||||| |||||||||||||||    
T  36052985 gactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctcctaagct 36053048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 44 - 170
Target Start/End: Complemental strand, 18253967 - 18253841
Alignment:
Q  44 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 143  Q
    |||||||||||| ||||| ||||||| ||| |||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| |     
T  18253967 gcacaattttcacaacttatcatttttacacatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcattac 18253868  T
Q  144 agttgtagcacgaatttagcaacaatt 170  Q
    ||||| ||||||||||||| |||||||    
T  18253867 agttggagcacgaatttagtaacaatt 18253841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 44 - 141
Target Start/End: Complemental strand, 16479082 - 16478985
Alignment:
Q  44 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatc 141  Q
    |||||||||||| ||||| ||||||| |||||||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  16479082 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatc 16478985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 48 - 176
Target Start/End: Original strand, 3060101 - 3060229
Alignment:
Q  48 aattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagtt 147  Q
    |||||||| || || ||||||| |||||||| |||||||||||| ||||||| |  ||||||||| ||||||| ||||||||||| |||| |||| ||||    
T  3060101 aattttcacaatttatcatttttacatatttgaacatgtaatttcaccaacagtattacaattatcatcaattaatgcatacaaatatattatcacagtt 3060200  T
Q  148 gtagcacgaatttagcaacaattatccat 176  Q
    | |||||||||||||||||||||||||||    
T  3060201 ggagcacgaatttagcaacaattatccat 3060229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 44 - 142
Target Start/End: Original strand, 13572808 - 13572906
Alignment:
Q  44 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatca 142  Q
    ||||||| |||||||||| ||||||| ||||||||||||||||||||| ||||||||||| ||||| || ||||||||||||||||||||||| |||||    
T  13572808 gcacaatattcataacttatcatttttacatatttaaacatgtaatttcaccaacaatcacacaatcatcatcaattcatgcatacaaacataacatca 13572906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 228 - 335
Target Start/End: Original strand, 13758675 - 13758783
Alignment:
Q  228 acatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctttcccaa-tggattcttcaa 326  Q
    |||||||||||||||  |||||||||||||||||||| ||||||||  ||||||    ||||||||||||||||||||||| ||||| ||||||||||||    
T  13758675 acatgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctcctaagcttacccaattggattcttcaa 13758774  T
Q  327 gttcttctc 335  Q
    |||||||||    
T  13758775 gttcttctc 13758783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 44 - 164
Target Start/End: Original strand, 10989541 - 10989661
Alignment:
Q  44 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 143  Q
    ||||||| |||||||||| |||||||  ||||| | |||||||||||| |||||||||||||||| ||  ||||||||||||||||||||||| |||||     
T  10989541 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcac 10989640  T
Q  144 agttgtagcacgaatttagca 164  Q
    ||    |||||||||||||||    
T  10989641 agcaagagcacgaatttagca 10989661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 52 - 142
Target Start/End: Complemental strand, 13911136 - 13911046
Alignment:
Q  52 ttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatca 142  Q
    |||||||||| |||||||  ||||| | |||||||||||| |||||||||||||||||||  ||||||||||||||||||||||| |||||    
T  13911136 ttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaattaacatcaattcatgcatacaaacataacatca 13911046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 45 - 142
Target Start/End: Original strand, 2437590 - 2437687
Alignment:
Q  45 cacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatca 142  Q
    |||||| |||||||||| |||||||  ||||| | |||||||||||| |||||||||||||||| ||  ||||||||||||||||||||||| |||||    
T  2437590 cacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatca 2437687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 230 - 307
Target Start/End: Complemental strand, 42056220 - 42056143
Alignment:
Q  230 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagct 307  Q
    |||||||||||||||||||||||||||||||||||| |||||||  || ||| ||||||||| |||||||||||||||    
T  42056220 atgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctcctaagct 42056143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 230 - 305
Target Start/End: Original strand, 2029244 - 2029319
Alignment:
Q  230 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaag 305  Q
    |||||||||||||||||||||||||||||||||||| |||||||   | ||| |||||||||||||||||||||||    
T  2029244 atgattatgataaagactaacccccttaccttagataaagattaattccaacttaggcttcaatttagctcctaag 2029319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 230 - 305
Target Start/End: Original strand, 3049905 - 3049980
Alignment:
Q  230 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaag 305  Q
    |||||||||||||| ||||||||||||||||||||| |||||||  || ||| |||||||||||||||||| ||||    
T  3049905 atgattatgataaaaactaacccccttaccttagataaagattaatcccaacttaggcttcaatttagctcttaag 3049980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 48 - 177
Target Start/End: Complemental strand, 296094 - 295965
Alignment:
Q  48 aattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagtt 147  Q
    |||||| ||||||| ||||||| ||||| || |||||| ||||| |||||||||||||  ||||| ||| ||||||||| ||||||||| || |  | ||    
T  296094 aatttttataacttctcatttttacataattcaacatgaaatttcaccaacaatcataacattatcatcgattcatgcacacaaacataacacctcaatt 295995  T
Q  148 gtagcacgaatttagcaacaattatccatt 177  Q
      | ||||||||||||||||||||| ||||    
T  295994 agaacacgaatttagcaacaattattcatt 295965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 230 - 307
Target Start/End: Original strand, 25124450 - 25124527
Alignment:
Q  230 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagct 307  Q
    ||||||||||| |||||||||||||||||||||||| | |||||  | |||| ||||||||| |||||||||||||||    
T  25124450 atgattatgatgaagactaacccccttaccttagataatgattaatctaaacttaggcttcactttagctcctaagct 25124527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 230 - 307
Target Start/End: Complemental strand, 2190117 - 2190040
Alignment:
Q  230 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagct 307  Q
    |||||||||||||| ||||||| ||||||||||||| |||||||  || ||| ||||||||| |||| ||||||||||    
T  2190117 atgattatgataaaaactaaccgccttaccttagataaagattaatcccaacttaggcttcactttaactcctaagct 2190040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 228 - 305
Target Start/End: Original strand, 15927873 - 15927950
Alignment:
Q  228 acatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaag 305  Q
    |||||||||||||||  |||||||||||||||||||| ||||||||  ||||||    ||||||||| ||||||||||    
T  15927873 acatgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctcctaag 15927950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 228 - 305
Target Start/End: Complemental strand, 18979972 - 18979895
Alignment:
Q  228 acatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaag 305  Q
    |||||||||||||||  |||||||||||||||||||| ||||||||  ||||||    ||||||||| ||||||||||    
T  18979972 acatgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctcctaag 18979895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 186 - 308
Target Start/End: Complemental strand, 15760106 - 15759985
Alignment:
Q  186 tcaacccattt-catacaaatcatgaaaaattgcaatgaatgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaaaccta 284  Q
    ||||||||||| |||||||  ||||| ||| |||||  | |||||||||||||||| |  |||||||||||||||||||| ||||||||   |||||       
T  15760106 tcaacccattttcatacaa--catgagaaaatgcaaaaattgaacatgattatgatgataactaacccccttaccttagaagaagattaacacaaactct 15760009  T
Q  285 ggcttcaatttagctcctaagctt 308  Q
     ||||||||| |||||||||||||    
T  15760008 tgcttcaattcagctcctaagctt 15759985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 231 - 304
Target Start/End: Complemental strand, 10000318 - 10000245
Alignment:
Q  231 tgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaa 304  Q
    |||||||||| ||||| |||||||||||||||||||| | |||  |  ||| ||||||||| ||||||||||||    
T  10000318 tgattatgatgaagacaaacccccttaccttagatgatgtttaatcttaacttaggcttcactttagctcctaa 10000245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 228 - 305
Target Start/End: Original strand, 13572979 - 13573056
Alignment:
Q  228 acatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaag 305  Q
    |||||||| ||||||  |||||||||||||||||||| ||||||||  ||||||    ||||||||| ||||||||||    
T  13572979 acatgattgtgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctcctaag 13573056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 230 - 307
Target Start/End: Original strand, 15709469 - 15709546
Alignment:
Q  230 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagct 307  Q
    ||||||||||| |||||||| || |||||||||||| | |||||  |  ||| ||||||||| |||||||||||||||    
T  15709469 atgattatgatgaagactaatcctcttaccttagattatgattaacctcaacttaggcttcactttagctcctaagct 15709546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 194 - 304
Target Start/End: Original strand, 371380 - 371491
Alignment:
Q  194 tttcatacaaatcatgaaaaattgcaatgaatgaac-atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaa 292  Q
    ||||||||||| || ||||||||||||  ||  ||  ||||||||||| |||||||||||||||||||||| | | ||| |   ||||| | |||||||     
T  371380 tttcatacaaaccaagaaaaattgcaaacaaacaattatgattatgatgaagactaacccccttaccttaggttatgatcaattcaaacttgggcttcac 371479  T
Q  293 tttagctcctaa 304  Q
    ||||||||||||    
T  371480 tttagctcctaa 371491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 186 - 271
Target Start/End: Complemental strand, 14250890 - 14250806
Alignment:
Q  186 tcaacccattt-catacaaatcatgaaaaattgcaatgaatgaacatgattatgataaagactaacccccttaccttagatgaagat 271  Q
    ||||||||||| |||||||  ||||| ||| |||||  |||||||||||||| ||| |  |||||||||||||||||||| ||||||    
T  14250890 tcaacccattttcatacaa--catgagaaaatgcaaaaaatgaacatgattacgatgataactaacccccttaccttagaagaagat 14250806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 228 - 303
Target Start/End: Complemental strand, 15950742 - 15950667
Alignment:
Q  228 acatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctccta 303  Q
    |||||||||||||||  ||||||||||||||||| || ||||||||  ||||||    ||||||||| ||||||||    
T  15950742 acatgattatgataataactaacccccttacctttgaagaagattaacccaaactcttgcttcaattcagctccta 15950667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 67 - 160
Target Start/End: Complemental strand, 16915023 - 16914928
Alignment:
Q  67 tttcacata-tttaaacatgtaatttaaccaacaatcatacaattattatcaatt-catgcatacaaacatatcatcaaagttgtagcacgaattt 160  Q
    ||||||||| ||| |||||| ||||| ||||||||  || ||||||| ||||||| ||||||| |||||||||||||| | ||  |||||||||||    
T  16915023 tttcacatactttgaacatgcaatttcaccaacaacaattcaattatcatcaatttcatgcattcaaacatatcatcataattagagcacgaattt 16914928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 307
Target Start/End: Original strand, 36024452 - 36024530
Alignment:
Q  230 atgattatgataaagactaacccc-cttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagct 307  Q
    ||||||||||| |||||||||||| |||||||||||| | |||||  |  ||| ||||||||| |||||||| ||||||    
T  36024452 atgattatgatgaagactaaccccccttaccttagattatgattaacctcaacttaggcttcactttagctcataagct 36024530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 80 - 170
Target Start/End: Complemental strand, 48622754 - 48622664
Alignment:
Q  80 aacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttgtagcacgaatttagcaacaatt 170  Q
    |||||||||||| ||| |||| ||||| || || ||||||||||||| |  || ||||||||| |||   ||||||||||||||| |||||    
T  48622754 aacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatatcatcacagtaagagcacgaatttagcatcaatt 48622664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 304
Target Start/End: Complemental strand, 48622614 - 48622541
Alignment:
Q  231 tgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaa 304  Q
    |||||||||| || || |||||||||||||||||||| | |||  |  ||| ||||||||| ||||||||||||    
T  48622614 tgattatgatgaaaacaaacccccttaccttagatgatgtttaatcttaacttaggcttcactttagctcctaa 48622541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 230 - 262
Target Start/End: Original strand, 126738 - 126770
Alignment:
Q  230 atgattatgataaagactaacccccttacctta 262  Q
    |||||||||||||| ||||||||||||||||||    
T  126738 atgattatgataaaaactaacccccttacctta 126770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 261
Target Start/End: Original strand, 7823001 - 7823066
Alignment:
Q  194 tttcatacaaatcatgaaaaattgcaatgaatgaacatgattatgataaagactaacccccttacctt 261  Q
    ||||||||||  ||||| ||| ||||| || || |||||||||||||||  |||||||||||||||||    
T  7823001 tttcatacaa--catgagaaaatgcaaagattgtacatgattatgataataactaacccccttacctt 7823066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 261
Target Start/End: Original strand, 7830312 - 7830377
Alignment:
Q  194 tttcatacaaatcatgaaaaattgcaatgaatgaacatgattatgataaagactaacccccttacctt 261  Q
    ||||||||||  ||||| ||| ||||| || || |||||||||||||||  |||||||||||||||||    
T  7830312 tttcatacaa--catgagaaaatgcaaagattgtacatgattatgataataactaacccccttacctt 7830377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 230 - 258
Target Start/End: Complemental strand, 15516793 - 15516765
Alignment:
Q  230 atgattatgataaagactaacccccttac 258  Q
    |||||||||||||||||||||||||||||    
T  15516793 atgattatgataaagactaacccccttac 15516765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 307
Target Start/End: Complemental strand, 17817363 - 17817315
Alignment:
Q  259 cttagatgaagattagaccaaacctaggcttcaatttagctcctaagct 307  Q
    |||||||||||||||  || ||| |||||||||||||||||| ||||||    
T  17817363 cttagatgaagattaatcccaacttaggcttcaatttagctcgtaagct 17817315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 307
Target Start/End: Original strand, 19049638 - 19049686
Alignment:
Q  259 cttagatgaagattagaccaaacctaggcttcaatttagctcctaagct 307  Q
    |||||||||||||||  || ||| |||||||||||||||||| ||||||    
T  19049638 cttagatgaagattaatcccaacttaggcttcaatttagctcgtaagct 19049686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 261
Target Start/End: Complemental strand, 27101620 - 27101555
Alignment:
Q  194 tttcatacaaatcatgaaaaattgcaatgaatgaacatgattatgataaagactaacccccttacctt 261  Q
    ||||||||||  ||||| ||| ||||| || || |||||||||||||||  |||||||||||||||||    
T  27101620 tttcatacaa--catgagaaaatgcaaagattgtacatgattatgataataactaacccccttacctt 27101555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 261
Target Start/End: Complemental strand, 27108968 - 27108903
Alignment:
Q  194 tttcatacaaatcatgaaaaattgcaatgaatgaacatgattatgataaagactaacccccttacctt 261  Q
    ||||||||||  ||||| ||| ||||| || || |||||||||||||||  |||||||||||||||||    
T  27108968 tttcatacaa--catgagaaaatgcaaagattgtacatgattatgataataactaacccccttacctt 27108903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 261
Target Start/End: Original strand, 27176706 - 27176771
Alignment:
Q  194 tttcatacaaatcatgaaaaattgcaatgaatgaacatgattatgataaagactaacccccttacctt 261  Q
    ||||||||||  ||||| ||| ||||| || || |||||||||||||||  |||||||||||||||||    
T  27176706 tttcatacaa--catgagaaaatgcaaagattgtacatgattatgataataactaacccccttacctt 27176771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 230 - 262
Target Start/End: Complemental strand, 32493978 - 32493946
Alignment:
Q  230 atgattatgataaagactaacccccttacctta 262  Q
    |||||||||||||| ||||||||||||||||||    
T  32493978 atgattatgataaaaactaacccccttacctta 32493946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 261
Target Start/End: Complemental strand, 38783712 - 38783647
Alignment:
Q  194 tttcatacaaatcatgaaaaattgcaatgaatgaacatgattatgataaagactaacccccttacctt 261  Q
    ||||||||||  ||||| ||| ||||| || || |||||||||||||||  |||||||||||||||||    
T  38783712 tttcatacaa--catgagaaaatgcaaagattgtacatgattatgataataactaacccccttacctt 38783647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 303; Significance: 1e-170; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 13 - 335
Target Start/End: Complemental strand, 2449401 - 2449079
Alignment:
Q  13 tcaagaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattat 112  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  2449401 tcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattat 2449302  T
Q  113 tatcaattcatgcatacaaacatatcatcaaagttgtagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaa 212  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  2449301 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccattcattcatttcaacccatttcatccaaatcatgaaa 2449202  T
Q  213 aattgcaatgaatgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctttccc 312  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2449201 aattgcaaagaatgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctttccc 2449102  T
Q  313 aatggattcttcaagttcttctc 335  Q
    |||||||||||||||||||||||    
T  2449101 aatggattcttcaagttcttctc 2449079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 19 - 307
Target Start/End: Complemental strand, 17912639 - 17912353
Alignment:
Q  19 acaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaa 118  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||    
T  17912639 acaacatatcaaattcatcaattttgcacaattttcataacttttcatttttacatatttaaacatgtaatttcaccaacaatcatacaattatcatcaa 17912540  T
Q  119 ttcatgcatacaaacatatcatcaaagttgtagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaaattgc 218  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  17912539 ttcatgcatacaaacatatcatc-aagttggagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaataatg-aaaattgc 17912442  T
Q  219 aatgaatgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagct 307  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||| |||||||  || | |  ||||||||||||||||||||||||    
T  17912441 aataaatgaacatgattatgataaagactaacccccttaccttagataaagattaatcccacctcaggcttcaatttagctcctaagct 17912353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 29 - 335
Target Start/End: Complemental strand, 13955036 - 13954730
Alignment:
Q  29 aaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcata 128  Q
    ||||||||| |||  ||||||| |||||||||  ||||||| || |||||||||||||||||  ||||||||||||||||| || | |||||||||||||    
T  13955036 aaattcatcaattgagcacaatattcataactgatcatttttacttatttaaacatgtaattccaccaacaatcatacaatcatcaacaattcatgcata 13954937  T
Q  129 caaacatatcatcaaagttgtagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaaattgcaatgaatgaa 228  Q
    ||| |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| |||||||    
T  13954936 caa-catatcatcaaagttggagcacgaatttagcaacaattatccattcattcctttcaacccatttcatacaattcatgaaaaattgcaaagaatgaa 13954838  T
Q  229 catgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctttcccaa-tggattcttcaag 327  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||    
T  13954837 catgattatggtaaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctcacccaattggattcttcaag 13954738  T
Q  328 ttcttctc 335  Q
    ||||||||    
T  13954737 ttcttctc 13954730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 44 - 335
Target Start/End: Original strand, 45860937 - 45861228
Alignment:
Q  44 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 143  Q
    ||||||| |||||||||| ||||||| || |||||||||||||||||  ||||||||||||||||| || | |||||||||||||||| |||||||||||    
T  45860937 gcacaatattcataacttatcatttttacttatttaaacatgtaattccaccaacaatcatacaatcatcaacaattcatgcatacaa-catatcatcaa 45861035  T
Q  144 agttgtagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaaattgcaatgaatgaacatgattatgataaa 243  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| ||||||| ||||||||| ||||    
T  45861036 agttggagcacgaatttagcaacaattatccattcattcctttcaacccatttcatacaattcatgaaaaattgcaaagaatgaatatgattatggtaaa 45861135  T
Q  244 gactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctttcccaa-tggattcttcaagttcttctc 335  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||    
T  45861136 gactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctcacccaattggattcttcaagttcttctc 45861228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 44 - 244
Target Start/End: Complemental strand, 13975853 - 13975654
Alignment:
Q  44 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 143  Q
    ||||||| |||||||||| ||||||| || |||||||||||||||||  ||||||||||||||||| || | |||||||||||||||| |||||||||||    
T  13975853 gcacaatattcataacttatcatttttacttatttaaacatgtaattccaccaacaatcatacaatcatcaacaattcatgcatacaa-catatcatcaa 13975755  T
Q  144 agttgtagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaaattgcaatgaatgaacatgattatgataaa 243  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||||| ||||    
T  13975754 agttggagcacgaatttagcaacaattatccattcattcctttcaacccatttcatacaattcatgaaaaattgcaaagaatgaacatgattatggtaaa 13975655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 21 - 176
Target Start/End: Complemental strand, 16744270 - 16744115
Alignment:
Q  21 aacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaatt 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  16744270 aacatgtcaaattcatccattttgcacaattttcataacttttcatttttacatatttaaaaatgtaatttaaccaacaatcatacacttattatcaatt 16744171  T
Q  121 catgcatacaaacatatcatcaaagttgtagcacgaatttagcaacaattatccat 176  Q
    |||| ||||||||||||||||||||||| |||||||||||| ||||||| ||||||    
T  16744170 catggatacaaacatatcatcaaagttggagcacgaatttaacaacaatcatccat 16744115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 52 - 335
Target Start/End: Original strand, 15614973 - 15615243
Alignment:
Q  52 ttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttgtag 151  Q
    |||| ||||| ||||||| |||||||| |||||||||||| |||||||||| ||||||||| ||||||||||||||||||| ||| || || |||   ||    
T  15614973 ttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcctacaattatcatcaattcatgcatacaaatataacaccacagtaagag 15615072  T
Q  152 cacgaatttagcaacaattatccattcattcatttcaacccattt-catacaaatcatgaaaaattgcaatgaatgaacatgattatgataaagactaac 250  Q
    ||| ||| |||||  |||| | |||          |||||||||| |||||||  ||||| ||| |||||  ||| | ||||||||||||||||||||||    
T  15615073 cacaaatctagcatgaattgttcat----------caacccattttcatacaa--catgagaaaatgcaa--aatta-catgattatgataaagactaac 15615157  T
Q  251 ccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctttcccaa-tggattcttcaagttcttctc 335  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  15615158 ccccttaccttaaatgaagattagaccaaacctaggcttcaatttagctcctaagctttcccaattggattcttcaagttattctc 15615243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 79 - 307
Target Start/End: Complemental strand, 11986263 - 11986035
Alignment:
Q  79 aaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttgtagcacgaatttagcaacaattatccattc 178  Q
    ||||||||||||| | | |||||||||||||||| || || ||||||| || || ||| ||||| ||||  |||||||||||| ||||||||||| ||||    
T  11986263 aaacatgtaatttcaaccacaatcatacaattatcattaaatcatgcacacgaaaataacatcacagttagagcacgaatttaacaacaattatcaattc 11986164  T
Q  179 attcatttcaacccatttcatacaaatcatgaaaaattgcaatgaatgaacatgattatgataaagactaacccccttaccttagatgaagattagacca 278  Q
    ||||   ||||||||||||||||||   | || || ||||||| | |||||||||||||||| |||||||||||||||||||||||| | |||||  |||    
T  11986163 attccaatcaacccatttcatacaacaaaggagaagttgcaataattgaacatgattatgatgaagactaacccccttaccttagataatgattaatcca 11986064  T
Q  279 aacctaggcttcaatttagctcctaagct 307  Q
    ||| |||||||||||||||||||||||||    
T  11986063 aacttaggcttcaatttagctcctaagct 11986035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 44 - 176
Target Start/End: Complemental strand, 51158150 - 51158018
Alignment:
Q  44 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 143  Q
    |||||||||||| ||||| ||||||| |||||||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||     
T  51158150 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcac 51158051  T
Q  144 agttgtagcacgaatttagcaacaattatccat 176  Q
    ||||| |||||||||||||||||||||||||||    
T  51158050 agttggagcacgaatttagcaacaattatccat 51158018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 44 - 308
Target Start/End: Complemental strand, 14842693 - 14842441
Alignment:
Q  44 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 143  Q
    |||||||||||||||||| ||||||| ||| |||| |||||| ||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||     
T  14842693 gcacaattttcataacttatcatttttacacatttgaacatgcaatttcaccaacaatcatacaattatcttcaattcatgcatacaaacatatcatcac 14842594  T
Q  144 agttgtagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaaattgcaatgaatgaacatgattatgataaa 243  Q
    ||||| |||||||||||||||||||||||||||  | |||        || |||||||||    ||| || ||||||  | |||| ||||||||||||||    
T  14842593 agttggagcacgaatttagcaacaattatccat--aatca--------caattcatacaacatttgagaatttgcaa--agtgaagatgattatgataaa 14842506  T
Q  244 gactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctt 308  Q
    ||||||||||||||||||||| ||||||||  || |||    ||||||||| |||||||||||||    
T  14842505 gactaacccccttaccttagaagaagattaaccctaactcttgcttcaattcagctcctaagctt 14842441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 44 - 177
Target Start/End: Complemental strand, 15859156 - 15859023
Alignment:
Q  44 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 143  Q
    |||||||||||| ||||| ||||||   ||||||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||     
T  15859156 gcacaattttcacaacttatcatttgttcatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcac 15859057  T
Q  144 agttgtagcacgaatttagcaacaattatccatt 177  Q
    ||||| ||||||||||||||||||||||||||||    
T  15859056 agttggagcacgaatttagcaacaattatccatt 15859023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 44 - 176
Target Start/End: Complemental strand, 12030279 - 12030147
Alignment:
Q  44 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 143  Q
    |||||| ||||| ||||| ||| ||| |||||||| |||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||||||||     
T  12030279 gcacaactttcacaacttatcacttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcac 12030180  T
Q  144 agttgtagcacgaatttagcaacaattatccat 176  Q
    ||||| |||||||||||||||||||||||||||    
T  12030179 agttggagcacgaatttagcaacaattatccat 12030147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 44 - 307
Target Start/End: Original strand, 13839025 - 13839277
Alignment:
Q  44 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 143  Q
    |||||||||||| ||||| ||||||   | ||||| |||||||||||| |||| ||||||||||||||| |||||||||||||||||||||||||||||     
T  13839025 gcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccatcaatcatacaattatcatcaattcatgcatacaaacatatcatcac 13839124  T
Q  144 agttgtagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaaattgcaatgaatgaacatgattatgataaa 243  Q
    ||||| ||||||||||||||||||||||| |||  | |||         | |||||||||    || |||||| ||   |||||  ||||||||||| ||    
T  13839125 agttggagcacgaatttagcaacaattattcat--aatca--------aaattcatacaacatttg-aaaatttcacaaaatgatgatgattatgatgaa 13839213  T
Q  244 gactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagct 307  Q
    ||||||||||||||||||||||||||| ||  ||  || |||||||||||||||||||||||||    
T  13839214 gactaacccccttaccttagatgaagagtaatccctacttaggcttcaatttagctcctaagct 13839277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 44 - 170
Target Start/End: Complemental strand, 15936759 - 15936633
Alignment:
Q  44 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 143  Q
    |||||||||||| ||||| ||||||| ||| |||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| |     
T  15936759 gcacaattttcacaacttatcatttttacacatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcattac 15936660  T
Q  144 agttgtagcacgaatttagcaacaatt 170  Q
    ||||| ||||||||||||| |||||||    
T  15936659 agttggagcacgaatttagtaacaatt 15936633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 44 - 176
Target Start/End: Original strand, 2049941 - 2050073
Alignment:
Q  44 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 143  Q
    |||||||||||| || || |||| || |||||||| |||||||||||| |||||||||| ||||||||| ||||||||| ||||||||||||||| |||     
T  2049941 gcacaattttcacaagttatcatgtttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcaggcatacaaacatatcgtcac 2050040  T
Q  144 agttgtagcacgaatttagcaacaattatccat 176  Q
    ||||| |||||||||||||||||||||||||||    
T  2050041 agttggagcacgaatttagcaacaattatccat 2050073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 44 - 170
Target Start/End: Complemental strand, 15938601 - 15938475
Alignment:
Q  44 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 143  Q
    |||||||||||| ||||| ||||||| ||| |||| |||||||||||| |||||||||||||||||||| |||||||||||  |||||||||||||| |     
T  15938601 gcacaattttcacaacttatcatttttacacatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgattacaaacatatcattac 15938502  T
Q  144 agttgtagcacgaatttagcaacaatt 170  Q
    ||||| |||||| |||||| |||||||    
T  15938501 agttggagcacgtatttagtaacaatt 15938475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 230 - 305
Target Start/End: Original strand, 38168237 - 38168312
Alignment:
Q  230 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaag 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||  || ||| |||||||||||||||||||||||    
T  38168237 atgattatgataaagactaacccccttaccttagatgaagattaatcccaacttaggcttcaatttagctcctaag 38168312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 80 - 307
Target Start/End: Original strand, 54651625 - 54651841
Alignment:
Q  80 aacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttgtagcacgaatttagcaacaattatccattca 179  Q
    |||||| ||||| ||  |||||||||||||||| ||||||||||||| |  || ||| ||||| ||    ||||||||||||||||||||||| |||       
T  54651625 aacatgcaatttcactcacaatcatacaattatcatcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattattcat--- 54651721  T
Q  180 ttcatttcaacccattt-catacaaatcatgaaaaattgcaatgaatgaacatgattatgataaagactaacccccttaccttagatgaagattagacca 278  Q
           |||||||||| |||||||  ||||| |||||||||  | |||||||||||||||| ||||| |||||||||||||||||||| |||||  |||    
T  54651722 -------caacccattttcatacaa--catgagaaattgcaaaaattgaacatgattatgatgaagacaaacccccttaccttagatgatgattaaccca 54651812  T
Q  279 aacctaggcttcaatttagctcctaagct 307  Q
    ||| |  ||||||||| ||||||||||||    
T  54651813 aacttttgcttcaattaagctcctaagct 54651841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 29 - 142
Target Start/End: Original strand, 16821256 - 16821369
Alignment:
Q  29 aaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcata 128  Q
    ||||||| | |||| |||||||  ||||| |||  |||||| |||||||| |||||||||||| |||||||||||||||||||| ||||||| |||||||    
T  16821256 aaattcaccaatttagcacaatactcatagcttaacatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaatttatgcata 16821355  T
Q  129 caaacatatcatca 142  Q
    |||||||| |||||    
T  16821356 caaacataacatca 16821369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 44 - 164
Target Start/End: Original strand, 55316351 - 55316471
Alignment:
Q  44 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 143  Q
    ||||||| |||||||||| |||||||  ||||| | |||||||||||| |||||||||||||||| ||  ||||||||||||||||||||||| |||||     
T  55316351 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcac 55316450  T
Q  144 agttgtagcacgaatttagca 164  Q
    ||    |||||||||||||||    
T  55316451 agcaagagcacgaatttagca 55316471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 150 - 335
Target Start/End: Complemental strand, 8268762 - 8268575
Alignment:
Q  150 agcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaaattgcaatgaatgaa--catgattatgataaagact 247  Q
    |||||||||||| ||||||||||| ||||||||   |||||| |||||||| ||  || | ||||||||||  ||   |  ||||||||||||||  |||    
T  8268762 agcacgaatttaacaacaattatcaattcattccaatcaacctatttcataaaa--caaggaaaattgcaaacaaaacaatcatgattatgataataact 8268665  T
Q  248 aacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctttcccaa-tgga-ttcttcaagttcttctc 335  Q
    ||||||||||||||||| ||||||||  ||||||    ||||||||||||||||||||||| ||||| |||| |||||||||||||||||    
T  8268664 aacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctcctaagcttacccaattggatttcttcaagttcttctc 8268575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 150 - 335
Target Start/End: Complemental strand, 8275862 - 8275675
Alignment:
Q  150 agcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaaattgcaatgaatgaa--catgattatgataaagact 247  Q
    |||||||||||| ||||||||||| ||||||||   |||||| |||||||| ||  || | ||||||||||  ||   |  ||||||||||||||  |||    
T  8275862 agcacgaatttaacaacaattatcaattcattccaatcaacctatttcataaaa--caaggaaaattgcaaacaaaacaatcatgattatgataataact 8275765  T
Q  248 aacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctttcccaa-tgga-ttcttcaagttcttctc 335  Q
    ||||||||||||||||| ||||||||  ||||||    ||||||||||||||||||||||| ||||| |||| |||||||||||||||||    
T  8275764 aacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctcctaagcttacccaattggatttcttcaagttcttctc 8275675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 230 - 305
Target Start/End: Original strand, 33342204 - 33342279
Alignment:
Q  230 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaag 305  Q
    ||||||||||||||||||||||| ||||||||||||||||||||  || ||| |||||||||||||||||||||||    
T  33342204 atgattatgataaagactaaccctcttaccttagatgaagattaatcccaacttaggcttcaatttagctcctaag 33342279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 230 - 304
Target Start/End: Original strand, 2050115 - 2050189
Alignment:
Q  230 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaa 304  Q
    |||||||||||||||||||||||||||||||||||| |||||||  || ||| ||||||||||||||||||||||    
T  2050115 atgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcaatttagctcctaa 2050189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 230 - 307
Target Start/End: Original strand, 53771365 - 53771442
Alignment:
Q  230 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagct 307  Q
    |||||||||||||||||||||||||||||||||||| |||||||  || ||| ||||||||| |||||||||||||||    
T  53771365 atgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctcctaagct 53771442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 230 - 314
Target Start/End: Original strand, 23492696 - 23492780
Alignment:
Q  230 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctttcccaa 314  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||||||    ||||||||| ||||||||||||| |||||    
T  23492696 atgattatgataaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttacccaa 23492780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 44 - 164
Target Start/End: Original strand, 41270207 - 41270327
Alignment:
Q  44 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 143  Q
    ||||||| |||||||||| |||||||  ||||| | |||||||||||  |||||||||||||||| ||  ||||||||||||||||||||||| |||||     
T  41270207 gcacaatattcataacttatcatttttgcatatatgaacatgtaattccaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcac 41270306  T
Q  144 agttgtagcacgaatttagca 164  Q
    ||    |||||||||||||||    
T  41270307 agcaagagcacgaatttagca 41270327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 230 - 307
Target Start/End: Complemental strand, 12030105 - 12030028
Alignment:
Q  230 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagct 307  Q
    ||||||||||||| || ||||||||||||||||||| |||||||  || ||| |||||||||||||||||||||||||    
T  12030105 atgattatgataatgattaacccccttaccttagataaagattaatcccaacttaggcttcaatttagctcctaagct 12030028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 230 - 307
Target Start/End: Original strand, 16261777 - 16261854
Alignment:
Q  230 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagct 307  Q
    |||||||||||||||||||||||||||||||||||| |||||||   | ||| ||||||||| |||||||||||||||    
T  16261777 atgattatgataaagactaacccccttaccttagataaagattaattccaacttaggcttcactttagctcctaagct 16261854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 114 - 177
Target Start/End: Original strand, 19231982 - 19232045
Alignment:
Q  114 atcaattcatgcatacaaacatatcatcaaagttgtagcacgaatttagcaacaattatccatt 177  Q
    ||||||||||| ||| ||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  19231982 atcaattcatgaatataaacatatcatcacagttggagcacgaatttagcaacaattatccatt 19232045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 230 - 300
Target Start/End: Complemental strand, 19260781 - 19260711
Alignment:
Q  230 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctc 300  Q
    |||||||||||||||||||||||||||||||||||| |||||||  || ||| ||| ||||||||||||||    
T  19260781 atgattatgataaagactaacccccttaccttagataaagattaatcccaacttagacttcaatttagctc 19260711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 230 - 307
Target Start/End: Original strand, 30153265 - 30153342
Alignment:
Q  230 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagct 307  Q
    |||||||||||||| |||||||||||||||||||||||||||||  || ||| ||| ||||  |||||||||||||||    
T  30153265 atgattatgataaaaactaacccccttaccttagatgaagattaatcccaacttagacttctctttagctcctaagct 30153342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 230 - 304
Target Start/End: Original strand, 14285289 - 14285363
Alignment:
Q  230 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaa 304  Q
    ||||||||||| |||||||||||||||||||||||| | |||||  |||||| || |||||| ||||||||||||    
T  14285289 atgattatgatgaagactaacccccttaccttagataatgattaatccaaacttaagcttcactttagctcctaa 14285363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 230 - 304
Target Start/End: Complemental strand, 54685233 - 54685159
Alignment:
Q  230 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaa 304  Q
    |||||||| |||||||||||||| |||||||| |||||||||||  || ||| ||| ||||||||||||||||||    
T  54685233 atgattatcataaagactaacccacttaccttggatgaagattaatcccaacttagacttcaatttagctcctaa 54685159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 230 - 303
Target Start/End: Original strand, 28558494 - 28558567
Alignment:
Q  230 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctccta 303  Q
    |||||||||||||| |||||||| |||||||||||| |||||||  || ||| ||||||||||||| |||||||    
T  28558494 atgattatgataaaaactaaccctcttaccttagataaagattaatcccaacttaggcttcaattttgctccta 28558567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 230 - 304
Target Start/End: Original strand, 19947026 - 19947100
Alignment:
Q  230 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaa 304  Q
    ||||||||||| |||||||||||||||||||||| | | |||||  |||||| ||||||||| |||| |||||||    
T  19947026 atgattatgatgaagactaacccccttaccttaggttatgattaatccaaacttaggcttcactttaactcctaa 19947100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 230 - 303
Target Start/End: Complemental strand, 51961063 - 51960990
Alignment:
Q  230 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctccta 303  Q
    ||||||||||| |||||||||||||||||||||||| | |||||  |||||| ||| ||||| |||| ||||||    
T  51961063 atgattatgatgaagactaacccccttaccttagataatgattaatccaaacttagacttcactttacctccta 51960990  T

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Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 228 - 308
Target Start/End: Complemental strand, 18896995 - 18896915
Alignment:
Q  228 acatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctt 308  Q
    |||||||||||||||  ||||||||||||||||| || ||||||||  ||||||    ||||||||| |||||||||||||    
T  18896995 acatgattatgataataactaacccccttaccttggaagaagattaacccaaactcttgcttcaattcagctcctaagctt 18896915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 228 - 304
Target Start/End: Original strand, 18911298 - 18911374
Alignment:
Q  228 acatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaa 304  Q
    |||||||||||||||  |||||||||||||||||||| ||||||||  ||||||    ||||||||| |||||||||    
T  18911298 acatgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctcctaa 18911374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 225 - 308
Target Start/End: Original strand, 5228614 - 5228697
Alignment:
Q  225 tgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctt 308  Q
    |||||||||||||||| |  |||||||||||||||||||| ||||||||  ||||||    | ||||||| |||||||||||||    
T  5228614 tgaacatgattatgatgataactaacccccttaccttagaagaagattaacccaaactcttgtttcaattcagctcctaagctt 5228697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 150 - 304
Target Start/End: Complemental strand, 11477208 - 11477053
Alignment:
Q  150 agcacgaattt-agcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaaattgcaatgaatgaa--catgattatgataaagac 246  Q
    ||||||||||| | ||||||||||| ||||||||   ||||||||||||||||||  || | ||||||||||  ||   |  |||||||||||  |||||    
T  11477208 agcacgaattttaacaacaattatcaattcattccaatcaacccatttcatacaa--caaggaaaattgcaaacaaaacaatcatgattatgaagaagac 11477111  T
Q  247 taacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaa 304  Q
    ||||||||||||||||| | | |||||   ||||| ||||||||| |||| |||||||    
T  11477110 taacccccttaccttaggtaatgattaattcaaacttaggcttcactttaactcctaa 11477053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 106 - 160
Target Start/End: Original strand, 14080701 - 14080756
Alignment:
Q  106 caattattatcaatt-catgcatacaaacatatcatcaaagttgtagcacgaattt 160  Q
    ||||||| ||||||| |||||||||||||||||||||| ||||| |||||||||||    
T  14080701 caattatcatcaatttcatgcatacaaacatatcatcatagttggagcacgaattt 14080756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 230 - 263
Target Start/End: Complemental strand, 16933901 - 16933868
Alignment:
Q  230 atgattatgataaagactaacccccttaccttag 263  Q
    ||||||||||||||||||||||||||||||||||    
T  16933901 atgattatgataaagactaacccccttaccttag 16933868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 262
Target Start/End: Complemental strand, 17955916 - 17955884
Alignment:
Q  230 atgattatgataaagactaacccccttacctta 262  Q
    |||||||||||||||||||||||||||||||||    
T  17955916 atgattatgataaagactaacccccttacctta 17955884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 228 - 303
Target Start/End: Complemental strand, 12264743 - 12264668
Alignment:
Q  228 acatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctccta 303  Q
    |||||||||||||||  ||||||||||||||||| || || |||||  || |||||  ||||||||| ||||||||    
T  12264743 acatgattatgataataactaacccccttacctttgaagatgattaatcccaacctttgcttcaattcagctccta 12264668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 229 - 308
Target Start/End: Original strand, 25059045 - 25059124
Alignment:
Q  229 catgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctt 308  Q
    ||||||||||||||  ||||||||||||||||| || ||||||||  || ||  |  ||||||||| |||||||||||||    
T  25059045 catgattatgataataactaacccccttacctttgaagaagattaaccctaatttttgcttcaattcagctcctaagctt 25059124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 176
Target Start/End: Complemental strand, 19260869 - 19260823
Alignment:
Q  130 aaacatatcatcaaagttgtagcacgaatttagcaacaattatccat 176  Q
    ||||||||||||| | ||  |||||||||||||||||||||||||||    
T  19260869 aaacatatcatcataattagagcacgaatttagcaacaattatccat 19260823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 273
Target Start/End: Complemental strand, 15468291 - 15468246
Alignment:
Q  228 acatgattatgataaagactaacccccttaccttagatgaagatta 273  Q
    |||||||||||||||  ||||||||||||||||| || ||||||||    
T  15468291 acatgattatgataataactaacccccttacctttgaagaagatta 15468246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 261
Target Start/End: Original strand, 49232700 - 49232774
Alignment:
Q  186 tcaacccattt-catacaaatcatgaaaaattgcaatgaatgaacatgattatgataaagactaacccccttacctt 261  Q
    ||||||||||| |||||||  ||||| ||| ||||| || || |||||||||||||||  |||||||||||||||||    
T  49232700 tcaacccattttcatacaa--catgagaaaatgcaaagattgtacatgattatgataataactaacccccttacctt 49232774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 261
Target Start/End: Complemental strand, 1467722 - 1467657
Alignment:
Q  194 tttcatacaaatcatgaaaaattgcaatgaatgaacatgattatgataaagactaacccccttacctt 261  Q
    ||||||||||  ||||| ||| ||||| || || |||||||||||||||  |||||||||||||||||    
T  1467722 tttcatacaa--catgagaaaatgcaaagattgtacatgattatgataataactaacccccttacctt 1467657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 230 - 262
Target Start/End: Original strand, 2844514 - 2844546
Alignment:
Q  230 atgattatgataaagactaacccccttacctta 262  Q
    |||||||||||||| ||||||||||||||||||    
T  2844514 atgattatgataaaaactaacccccttacctta 2844546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 230 - 262
Target Start/End: Original strand, 3992873 - 3992905
Alignment:
Q  230 atgattatgataaagactaacccccttacctta 262  Q
    |||||||||||||| ||||||||||||||||||    
T  3992873 atgattatgataaaaactaacccccttacctta 3992905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 307
Target Start/End: Complemental strand, 5240632 - 5240584
Alignment:
Q  259 cttagatgaagattagaccaaacctaggcttcaatttagctcctaagct 307  Q
    |||||||||||||||  || ||| |||||||||||||||||| ||||||    
T  5240632 cttagatgaagattaatcccaacttaggcttcaatttagctcgtaagct 5240584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 230 - 262
Target Start/End: Complemental strand, 15857195 - 15857163
Alignment:
Q  230 atgattatgataaagactaacccccttacctta 262  Q
    ||||||||||| |||||||||||||||||||||    
T  15857195 atgattatgatgaagactaacccccttacctta 15857163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 230 - 262
Target Start/End: Original strand, 19232089 - 19232121
Alignment:
Q  230 atgattatgataaagactaacccccttacctta 262  Q
    ||||||| |||||||||||||||||||||||||    
T  19232089 atgattaagataaagactaacccccttacctta 19232121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 230 - 262
Target Start/End: Complemental strand, 54038056 - 54038024
Alignment:
Q  230 atgattatgataaagactaacccccttacctta 262  Q
    |||||||||||||| ||||||||||||||||||    
T  54038056 atgattatgataaaaactaacccccttacctta 54038024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 230 - 262
Target Start/End: Original strand, 55513193 - 55513225
Alignment:
Q  230 atgattatgataaagactaacccccttacctta 262  Q
    |||||||||||||| ||||||||||||||||||    
T  55513193 atgattatgataaaaactaacccccttacctta 55513225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 303; Significance: 1e-170; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 13 - 335
Target Start/End: Original strand, 51452592 - 51452914
Alignment:
Q  13 tcaagaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattat 112  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51452592 tcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattat 51452691  T
Q  113 tatcaattcatgcatacaaacatatcatcaaagttgtagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaa 212  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51452692 tatcaattcatgcatacaaacatatcatcaaagttgaagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaa 51452791  T
Q  213 aattgcaatgaatgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctttccc 312  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51452792 aattgcaaagaatgaacatgattaagataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctttccc 51452891  T
Q  313 aatggattcttcaagttcttctc 335  Q
    |||||||||||||||||| ||||    
T  51452892 aatggattcttcaagttcctctc 51452914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 44 - 335
Target Start/End: Original strand, 45051554 - 45051832
Alignment:
Q  44 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 143  Q
    |||||||||||| ||||| ||||||| |||||||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||| || |||||     
T  45051554 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacgtaacatcac 45051653  T
Q  144 agttgtagcacgaatttagcaacaattatccattcattcatttcaacccattt-catacaaatcatgaaaaattgcaatgaatgaacatgattatgataa 242  Q
    |||   | ||||||| |||||  |||| | |||          |||||||||| |||||||  ||||| ||| |||||  ||| | ||||||||||||||    
T  45051654 agtaagaacacgaatctagcatgaattgttcat----------caacccattttcatacaa--catgagaaaatgcaa--aatca-catgattatgataa 45051738  T
Q  243 agactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctttcccaa-tggattcttcaagttcttctc 335  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  45051739 agactaacccccttaccttaaatgaagattagaccaaacctaggcttcaatttagctcctaagctttcccaattggattcttcaagttcttctc 45051832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 44 - 335
Target Start/End: Original strand, 2116386 - 2116664
Alignment:
Q  44 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 143  Q
    |||| ||||||| ||||| ||||||| |||||||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||     
T  2116386 gcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcac 2116485  T
Q  144 agttgtagcacgaatttagcaacaattatccattcattcatttcaacccatttc-atacaaatcatgaaaaattgcaatgaatgaacatgattatgataa 242  Q
    |||   ||||||||| |||||  |||| | |||          ||||||||||  ||||||  ||||| ||| |||||  ||| | ||||||||||||||    
T  2116486 agtaaaagcacgaatctagcatgaattgttcat----------caacccatttttatacaa--catgagaaaatgcaa--aatta-catgattatgataa 2116570  T
Q  243 agactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctttcccaa-tggattcttcaagttcttctc 335  Q
      ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  2116571 tcactaacccctttaccttaaatgaagattagaccaaacctaggcttcaatttagctcataagctttcccaattggattcttcaagttcttctc 2116664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 29 - 307
Target Start/End: Original strand, 20931461 - 20931727
Alignment:
Q  29 aaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcata 128  Q
    ||||||| | |||| |||||||||||||||||| ||||||| |||||| | |||||||||||| |||||||||| ||||||||| |||||||||||||||    
T  20931461 aaattcaccaatttagcacaattttcataacttatcatttttacatatatgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcata 20931560  T
Q  129 caaacatatcatcaaagttgtagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaaattgcaatgaatgaa 228  Q
    |||||||||||||| ||||| |||||||||||||||||||||||||||  |  ||    |||    |||||||||    |||||| ||||||  |||||     
T  20931561 caaacatatcatcacagttggagcacgaatttagcaacaattatccat--aagca----aac----ttcatacaacaattgaaaatttgcaa--aatgag 20931648  T
Q  229 catgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagct 307  Q
     ||||||||||||||| |||||||||||||||||||| |||||||  || ||| ||||||||| ||||||| |||||||    
T  20931649 gatgattatgataaaggctaacccccttaccttagataaagattaatcccaacttaggcttcactttagctgctaagct 20931727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 44 - 307
Target Start/End: Original strand, 20913161 - 20913412
Alignment:
Q  44 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 143  Q
    |||||||||||||||||| ||||||| |||||| | |||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||||||||     
T  20913161 gcacaattttcataacttatcatttttacatatatgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcac 20913260  T
Q  144 agttgtagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaaattgcaatgaatgaacatgattatgataaa 243  Q
    ||||| |||||||||||||||||||||||||           | | |  | |||||||||    |||||| ||||||  |||||  ||||||| ||||||    
T  20913261 agttggagcacgaatttagcaacaattatcc----------gtaagcaaaattcatacaacaattgaaaatttgcaa--aatgaggatgattacgataaa 20913348  T
Q  244 gactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagct 307  Q
    |||||||||||||||||||||| |||||||  || ||| ||||||||| |||||||||||||||    
T  20913349 gactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctcctaagct 20913412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 44 - 307
Target Start/End: Complemental strand, 20893758 - 20893506
Alignment:
Q  44 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 143  Q
    |||||||||||| ||||| ||||||   | ||||| |||||||||||| | |||||||||||||||||| |||||||||||||||||||||||||||||     
T  20893758 gcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaacaacaatcatacaattatcatcaattcatgcatacaaacatatcatcac 20893659  T
Q  144 agttgtagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaaattgcaatgaatgaacatgattatgataaa 243  Q
    ||||| |||| ||||||||||||||||||||||| || ||    ||   | |||||||||    || |||||| |||  |||||  ||||||||||| ||    
T  20893658 agttggagcaagaatttagcaacaattatccatt-atgca----aa---aattcatacaacatttg-aaaattacaa--aatgatgatgattatgatgaa 20893570  T
Q  244 gactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagct 307  Q
    |||||||||||||||||||| | |||||||  || ||| |||||||||||||||||||||||||    
T  20893569 gactaacccccttaccttaggtaaagattaatcccaacttaggcttcaatttagctcctaagct 20893506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 80 - 307
Target Start/End: Complemental strand, 37844546 - 37844329
Alignment:
Q  80 aacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttgtagcacgaatttagcaacaattatccattca 179  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||||||||| |    
T  37844546 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcatagttggagcatgaatttagcaacaattatccatt-a 37844448  T
Q  180 ttcatttcaacccatttcatacaaatcatgaaaaattgcaatgaatgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaa 279  Q
    | ||    ||   | |||||||||    |||||| |  |||  |||||  |||||||||||||||||||||||||||||||||||| || ||||  || |    
T  37844447 tgca----aa---aattcatacaacatttgaaaattcacaa--aatgatgatgattatgataaagactaacccccttaccttagataaaaattaatccca 37844357  T
Q  280 acctaggcttcaatttagctcctaagct 307  Q
    || |||||||||||||||||||||||||    
T  37844356 acttaggcttcaatttagctcctaagct 37844329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 44 - 176
Target Start/End: Original strand, 41394353 - 41394485
Alignment:
Q  44 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 143  Q
    |||||||||||| ||||| ||||||| |||||||| ||||||||| || |||||||||||||||||||| ||||||| |||||||||||||||||||||     
T  41394353 gcacaattttcacaacttatcatttttacatatttgaacatgtaacttcaccaacaatcatacaattatcatcaatttatgcatacaaacatatcatcat 41394452  T
Q  144 agttgtagcacgaatttagcaacaattatccat 176  Q
    ||||| |||||||||||||||||||| ||||||    
T  41394453 agttggagcacgaatttagcaacaatcatccat 41394485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 80 - 307
Target Start/End: Original strand, 20445846 - 20446064
Alignment:
Q  80 aacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttgtagcacgaatttagcaacaattatccattca 179  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| | ||| |||||||||||||||||||||||||||| |    
T  20445846 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacaattggagcacgaatttagcaacaattatccatt-a 20445944  T
Q  180 ttcatttcaacccatttcatacaaatcatgaaaaattgcaatgaatgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaa 279  Q
    | ||    ||   | |||||||||    || |||||| ||   |||||  ||||||||||||||||||||| |||||||||||||| |||||||  || |    
T  20445945 tgca----aa---aattcatacaacatttg-aaaatttcacaaaatgatgatgattatgataaagactaactcccttaccttagataaagattaatccca 20446036  T
Q  280 acctaggcttcaatttagctcctaagct 307  Q
    || |||||||||||||| ||||||||||    
T  20446037 acttaggcttcaatttaactcctaagct 20446064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 80 - 307
Target Start/End: Original strand, 20531611 - 20531828
Alignment:
Q  80 aacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttgtagcacgaatttagcaacaattatccattca 179  Q
    |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| |||| | ||| |||||||||||||||||||||||||||| |    
T  20531611 aacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatattatcacatttggagcacgaatttagcaacaattatccatt-a 20531709  T
Q  180 ttcatttcaacccatttcatacaaatcatgaaaaattgcaatgaatgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaa 279  Q
    | ||    ||   | |||||||||    |||||| |  |||  |||||  ||||||||||||||||||||   ||||||||||||| |||||||  || |    
T  20531710 tgca----aa---aattcatacaacatttgaaaattcacaa--aatgatgatgattatgataaagactaatttccttaccttagataaagattaatccca 20531800  T
Q  280 acctaggcttcaatttagctcctaagct 307  Q
    || |||||||||||||| ||||||||||    
T  20531801 acttaggcttcaatttatctcctaagct 20531828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 45 - 329
Target Start/End: Original strand, 22227941 - 22228215
Alignment:
Q  45 cacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaa 144  Q
    ||||||||||||||||| ||||||| |||||||| |||||||||||| || ||||||||||||||||| ||||||||||||| |  || ||| ||||| |    
T  22227941 cacaattttcataacttatcatttttacatatttgaacatgtaatttcactaacaatcatacaattatcatcaattcatgcacaagaaaataacatcaca 22228040  T
Q  145 gttgtagcacgaatttagcaacaattatccattcattcatttcaaccca-tttcatacaaatcatgaaaaattgcaatgaatgaacatgattatgataaa 243  Q
    |    |||||||||||||||| |||| | ||          |||||||| ||||||||||  ||||| ||| |||||  | || |||||||||||||||     
T  22228041 gcaagagcacgaatttagcaagaattgttca----------tcaacccattttcatacaa--catgagaaaatgcaaaaattgtacatgattatgataat 22228128  T
Q  244 gactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctt-tcccaatggattcttcaagtt 329  Q
     ||||||||||||||||| || || |||||  || |||    ||||||||| ||||| |||||||  |||||| |||||||||||||    
T  22228129 aactaacccccttacctttgaagatgattaaccctaactcttgcttcaattcagctcttaagcttaccccaattgattcttcaagtt 22228215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 231 - 335
Target Start/End: Complemental strand, 7640882 - 7640777
Alignment:
Q  231 tgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctttcccaa-tggattcttcaagtt 329  Q
    ||||||||||||  |||||||||||||||||||| ||||||||  ||||||    ||||||||||||||||||||||| ||||| |||||||||||||||    
T  7640882 tgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctcctaagcttacccaattggattcttcaagtt 7640783  T
Q  330 cttctc 335  Q
    ||||||    
T  7640782 cttctc 7640777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 45 - 126
Target Start/End: Original strand, 22232638 - 22232719
Alignment:
Q  45 cacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgca 126  Q
    ||||||||||||||||| ||||||| |||||||| |||||||||||| || ||||||||||||||||| |||||||||||||    
T  22232638 cacaattttcataacttatcatttttacatatttgaacatgtaatttcactaacaatcatacaattatcatcaattcatgca 22232719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 44 - 142
Target Start/End: Complemental strand, 18601238 - 18601140
Alignment:
Q  44 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatca 142  Q
    ||||||| |||||||||| |||||||  ||||| | |||||||||||| |||||||||||||||| ||  ||||||||||||||||||||||| |||||    
T  18601238 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatca 18601140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 226 - 335
Target Start/End: Original strand, 46523691 - 46523801
Alignment:
Q  226 gaacatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctttcccaa-tggattcttc 324  Q
    |||||||||||||||||  |||||||||||||||||||| ||||||||  ||||||    |||| |||||| ||||||||||| ||||| ||||||||||    
T  46523691 gaacatgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgctttaatttatctcctaagcttacccaattggattcttc 46523790  T
Q  325 aagttcttctc 335  Q
    |||||||||||    
T  46523791 aagttcttctc 46523801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 231 - 335
Target Start/End: Original strand, 22035755 - 22035860
Alignment:
Q  231 tgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctttcccaa-tggattcttcaagtt 329  Q
    ||||||||||||  |||||||||||||||||||| ||||||||  ||||||    ||||||||| ||||||||||||| ||||| |||||||||||||||    
T  22035755 tgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctcctaagcttacccaattggattcttcaagtt 22035854  T
Q  330 cttctc 335  Q
    ||||||    
T  22035855 cttctc 22035860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 44 - 164
Target Start/End: Complemental strand, 5072508 - 5072388
Alignment:
Q  44 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 143  Q
    ||||||| |||||||||| |||||||  ||||| | |||||||||||| |||||||||||||||| ||  ||||||||||||||| ||||||| |||||     
T  5072508 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatataaacataacatcac 5072409  T
Q  144 agttgtagcacgaatttagca 164  Q
    ||    |||||||||||||||    
T  5072408 agcaagagcacgaatttagca 5072388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 262
Target Start/End: Original strand, 41394527 - 41394559
Alignment:
Q  230 atgattatgataaagactaacccccttacctta 262  Q
    |||||||||||||||||||||||||||||||||    
T  41394527 atgattatgataaagactaacccccttacctta 41394559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 230 - 261
Target Start/End: Complemental strand, 15861358 - 15861327
Alignment:
Q  230 atgattatgataaagactaacccccttacctt 261  Q
    ||||||||||||||||||||||||||||||||    
T  15861358 atgattatgataaagactaacccccttacctt 15861327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 305
Target Start/End: Complemental strand, 5072337 - 5072260
Alignment:
Q  228 acatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaag 305  Q
    |||||||| ||||||  ||||||||||||||||| || ||||||||  || || ||  ||||||||| ||||||||||    
T  5072337 acatgattgtgataataactaacccccttacctttgaagaagattaaccctaatctttgcttcaattcagctcctaag 5072260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 261
Target Start/End: Complemental strand, 19962491 - 19962417
Alignment:
Q  186 tcaacccattt-catacaaatcatgaaaaattgcaatgaatgaacatgattatgataaagactaacccccttacctt 261  Q
    ||||||||||| |||||||  ||||| ||| ||||| || || |||||||||||||||  |||||||||||||||||    
T  19962491 tcaacccattttcatacaa--catgagaaaatgcaaagattgtacatgattatgataataactaacccccttacctt 19962417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 203
Target Start/End: Original strand, 20254551 - 20254604
Alignment:
Q  150 agcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaa 203  Q
    |||||| ||||| ||||||||||| ||||||||   ||||||||||||||||||    
T  20254551 agcacggatttaacaacaattatcaattcattccaatcaacccatttcatacaa 20254604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 261
Target Start/End: Original strand, 17004911 - 17004976
Alignment:
Q  194 tttcatacaaatcatgaaaaattgcaatgaatgaacatgattatgataaagactaacccccttacctt 261  Q
    ||||||||||  ||||| ||| ||||| || || |||||||||||||||  |||||||||||||||||    
T  17004911 tttcatacaa--catgagaaaatgcaaagattgtacatgattatgataataactaacccccttacctt 17004976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 230 - 262
Target Start/End: Original strand, 21860334 - 21860366
Alignment:
Q  230 atgattatgataaagactaacccccttacctta 262  Q
    |||||||||||||| ||||||||||||||||||    
T  21860334 atgattatgataaaaactaacccccttacctta 21860366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 230 - 262
Target Start/End: Complemental strand, 44034903 - 44034871
Alignment:
Q  230 atgattatgataaagactaacccccttacctta 262  Q
    |||||||||||||| ||||||||||||||||||    
T  44034903 atgattatgataaaaactaacccccttacctta 44034871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 300; Significance: 1e-169; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 300; E-Value: 1e-169
Query Start/End: Original strand, 13 - 335
Target Start/End: Original strand, 5238187 - 5238510
Alignment:
Q  13 tcaagaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattat 112  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5238187 tcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattat 5238286  T
Q  113 tatcaattcatgcatacaaacatatcatcaaagttgtagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaa 212  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  5238287 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccattcattcatttcaacccatttcatccaaatcatgaaa 5238386  T
Q  213 aattgcaatgaatgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctttccc 312  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5238387 aattgcaaagaatgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctttccc 5238486  T
Q  313 aa-tggattcttcaagttcttctc 335  Q
    || |||||||||||||||||||||    
T  5238487 aattggattcttcaagttcttctc 5238510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 300; E-Value: 1e-169
Query Start/End: Original strand, 13 - 335
Target Start/End: Complemental strand, 24661411 - 24661088
Alignment:
Q  13 tcaagaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattat 112  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24661411 tcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattat 24661312  T
Q  113 tatcaattcatgcatacaaacatatcatcaaagttgtagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaa 212  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  24661311 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccattcattcatttcaacccatttcatccaaatcatgaaa 24661212  T
Q  213 aattgcaatgaatgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctttccc 312  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24661211 aattgcaaagaatgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctttccc 24661112  T
Q  313 aa-tggattcttcaagttcttctc 335  Q
    || |||||||||||||||||||||    
T  24661111 aattggattcttcaagttcttctc 24661088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 300; E-Value: 1e-169
Query Start/End: Original strand, 13 - 335
Target Start/End: Original strand, 43685646 - 43685969
Alignment:
Q  13 tcaagaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattat 112  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43685646 tcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattat 43685745  T
Q  113 tatcaattcatgcatacaaacatatcatcaaagttgtagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaa 212  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  43685746 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccattcattcatttcaacccatttcatccaaatcatgaaa 43685845  T
Q  213 aattgcaatgaatgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctttccc 312  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43685846 aattgcaaagaatgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctttccc 43685945  T
Q  313 aa-tggattcttcaagttcttctc 335  Q
    || |||||||||||||||||||||    
T  43685946 aattggattcttcaagttcttctc 43685969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 298; E-Value: 1e-167
Query Start/End: Original strand, 19 - 335
Target Start/End: Complemental strand, 22907371 - 22907054
Alignment:
Q  19 acaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaa 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22907371 acaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaa 22907272  T
Q  119 ttcatgcatacaaacatatcatcaaagttgtagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaaattgc 218  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22907271 ttcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaaattgc 22907172  T
Q  219 aatgaatgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctttcccaa-tgg 317  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||    
T  22907171 aaagaatgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagcttacccaattgg 22907072  T
Q  318 attcttcaagttcttctc 335  Q
    ||||||||||||||||||    
T  22907071 attcttcaagttcttctc 22907054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 44 - 335
Target Start/End: Original strand, 17345700 - 17345993
Alignment:
Q  44 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 143  Q
    ||||||||||||||||||  |||||| ||||| || ||||||| |||| |||||||||||||||||||| ||||||||||||||| ||||||| |||||     
T  17345700 gcacaattttcataacttcacatttttacataattgaacatgtgatttcaccaacaatcatacaattatcatcaattcatgcatataaacataacatcac 17345799  T
Q  144 agttgtagcacgaatttagcaacaattatccattcattcatttcaacccat-ttcatacaaatcatgaaaaattgcaatgaatgaacatgattatgataa 242  Q
    ||||  ||||||||||| |||||||||||||||| ||||| |||||||||| |||||||||   |||| |||||||||| |||||||||||||||||| |    
T  17345800 agttagagcacgaatttcgcaacaattatccatttattcaattcaacccatattcatacaacaaatgagaaattgcaataaatgaacatgattatgatga 17345899  T
Q  243 agactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctt-tcccaatggattcttcaagttcttctc 335  Q
    |||||||||||||||||| ||| ||||||||  ||||||    ||||||||| |||||||||||||  |||||| ||||| ||||||| |||||    
T  17345900 agactaacccccttacctaagaagaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagttattctc 17345993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 44 - 307
Target Start/End: Complemental strand, 43373600 - 43373347
Alignment:
Q  44 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 143  Q
    |||||||||||| ||||| ||||||| |||||||| |||||||||||| ||||||||||||| |||||| |||||||||||||||||||| ||||||||     
T  43373600 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatataattatcatcaattcatgcatacaaacgtatcatcac 43373501  T
Q  144 agttgtagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaaattgcaatgaatgaacatgattatgataaa 243  Q
    ||||| |||||||||||||||  ||||||||||| || ||    ||   | |||||||||  |||   ||||| ||   |||||  ||||||||||||||    
T  43373500 agttggagcacgaatttagcattaattatccatt-ataca----aa---aattcatacaa--catttgaaatttcacaaaatgatgatgattatgataaa 43373411  T
Q  244 gactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagct 307  Q
    |||||||||||||||||||||| |||||||  || ||| ||||||||| |||||||||||||||    
T  43373410 gactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctcctaagct 43373347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 44 - 176
Target Start/End: Complemental strand, 16193848 - 16193716
Alignment:
Q  44 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 143  Q
    |||||||||||| ||||| ||||||| |||||||| ||||||||||||  ||||||||||||||||||| |||||||||||||||||||||||||||||     
T  16193848 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttccccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcat 16193749  T
Q  144 agttgtagcacgaatttagcaacaattatccat 176  Q
    ||||| |||||||||||||||||||| ||||||    
T  16193748 agttggagcacgaatttagcaacaatcatccat 16193716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 44 - 307
Target Start/End: Complemental strand, 24928923 - 24928671
Alignment:
Q  44 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 143  Q
    |||||||||||| ||||| ||||||   | ||||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| ||||     
T  24928923 gcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatataatcac 24928824  T
Q  144 agttgtagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaaattgcaatgaatgaacatgattatgataaa 243  Q
    ||||| |||||||||||||||||||||||||||  | |||         | |||||||||    || |||||| ||   |||||  ||||||||||||||    
T  24928823 agttggagcacgaatttagcaacaattatccat--aatca--------aaattcatacaacatttg-aaaatttcacaaaatgacgatgattatgataaa 24928735  T
Q  244 gactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagct 307  Q
    |||||||||| ||||||||||| |||||||  || ||| ||| |||||||||||||||||||||    
T  24928734 gactaaccccattaccttagataaagattaatcccaacttagacttcaatttagctcctaagct 24928671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 44 - 176
Target Start/End: Complemental strand, 16405107 - 16404975
Alignment:
Q  44 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 143  Q
    |||||||||||| |||||  |||||   | ||||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||     
T  16405107 gcacaattttcacaacttaacatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcac 16405008  T
Q  144 agttgtagcacgaatttagcaacaattatccat 176  Q
    ||||| |||||||||||||||| ||||||||||    
T  16405007 agttggagcacgaatttagcaataattatccat 16404975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 44 - 164
Target Start/End: Complemental strand, 6774378 - 6774258
Alignment:
Q  44 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 143  Q
    |||||||||||| ||||| ||||||| |||||||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||     
T  6774378 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcac 6774279  T
Q  144 agttgtagcacgaatttagca 164  Q
    |||   ||||||||| |||||    
T  6774278 agtaagagcacgaatctagca 6774258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 44 - 142
Target Start/End: Complemental strand, 21844692 - 21844594
Alignment:
Q  44 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatca 142  Q
    ||||||| |||||||||| ||||||| ||||||||||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||| |||||    
T  21844692 gcacaatattcataacttatcatttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacataacatca 21844594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 44 - 164
Target Start/End: Original strand, 24549113 - 24549233
Alignment:
Q  44 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 143  Q
    |||| ||||||| ||||| ||||||| |||||||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||     
T  24549113 gcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcac 24549212  T
Q  144 agttgtagcacgaatttagca 164  Q
    |||   ||||||||| |||||    
T  24549213 agtaagagcacgaatctagca 24549233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 44 - 142
Target Start/End: Complemental strand, 21852085 - 21851987
Alignment:
Q  44 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatca 142  Q
    ||||||| |||||||||| ||||||| |||||||||||||| |||||| ||||||||||||||||| || ||||||||||||||||||||||| |||||    
T  21852085 gcacaatattcataacttatcatttttacatatttaaacatttaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacataacatca 21851987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 230 - 307
Target Start/End: Complemental strand, 24385684 - 24385607
Alignment:
Q  230 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagct 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||  || ||| ||||||||| |||||||||||||||    
T  24385684 atgattatgataaagactaacccccttaccttagatgaagattaatcccaacttaggcttcactttagctcctaagct 24385607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 228 - 335
Target Start/End: Complemental strand, 16873002 - 16872894
Alignment:
Q  228 acatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctttcccaa-tggattcttcaa 326  Q
    |||||||||||||||  |||||||||||||||||||| ||||||||   |||||    ||||||||||||||||||||||| ||||| ||||||||||||    
T  16873002 acatgattatgataataactaacccccttaccttagaagaagattaactcaaactcttgcttcaatttagctcctaagcttacccaattggattcttcaa 16872903  T
Q  327 gttcttctc 335  Q
    |||||||||    
T  16872902 gttcttctc 16872894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 44 - 164
Target Start/End: Original strand, 30120854 - 30120974
Alignment:
Q  44 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 143  Q
    ||||||| |||||||||| |||||||  ||||| | |||||||||||| |||||||||||||||| ||  || |||||||||||||||||||| |||||     
T  30120854 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacataaattcatgcatacaaacataacatcac 30120953  T
Q  144 agttgtagcacgaatttagca 164  Q
    ||    |||||||||||||||    
T  30120954 agcaagagcacgaatttagca 30120974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 44 - 164
Target Start/End: Complemental strand, 16674512 - 16674392
Alignment:
Q  44 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 143  Q
    ||||||| |||||||||| |||||||  ||||| | |||||||||||| |||||||||||||||| ||  || |||||||||||| ||||||| |||||     
T  16674512 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacataaattcatgcataaaaacataacatcac 16674413  T
Q  144 agttgtagcacgaatttagca 164  Q
    ||    |||||||||||||||    
T  16674412 agaaagagcacgaatttagca 16674392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 230 - 307
Target Start/End: Complemental strand, 16193674 - 16193598
Alignment:
Q  230 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagct 307  Q
    |||||||||||||||||||||||| ||||||||||| ||||| |  || ||| |||||||||||||||||||||||||    
T  16193674 atgattatgataaagactaacccc-ttaccttagataaagatgaatcccaacttaggcttcaatttagctcctaagct 16193598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 230 - 307
Target Start/End: Complemental strand, 41506741 - 41506664
Alignment:
Q  230 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagct 307  Q
    ||||||||||| || ||||||||||||||||||||| | |||||  |||||| |||||||||||||||||| ||||||    
T  41506741 atgattatgatgaaaactaacccccttaccttagataaggattaacccaaacttaggcttcaatttagctcttaagct 41506664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 231 - 307
Target Start/End: Complemental strand, 7000551 - 7000475
Alignment:
Q  231 tgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagct 307  Q
    |||||||||| || |||||||||||||| |||||| | |||||  |||||| |||||||||||||||||||||||||    
T  7000551 tgattatgatgaaaactaacccccttactttagataaggattaacccaaacttaggcttcaatttagctcctaagct 7000475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 229 - 304
Target Start/End: Complemental strand, 21494389 - 21494314
Alignment:
Q  229 catgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaa 304  Q
    |||||||||||  |||||||||||||||||||||||| | |||||  |||||| ||||||||| ||||||||||||    
T  21494389 catgattatgaagaagactaacccccttaccttagataatgattaatccaaacttaggcttcactttagctcctaa 21494314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 230 - 304
Target Start/End: Original strand, 22886654 - 22886728
Alignment:
Q  230 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaa 304  Q
    ||||||||||| |||||||||||||||||||||| | | |||||  |||||| || |||||| ||||||||||||    
T  22886654 atgattatgattaagactaacccccttaccttaggtaatgattaatccaaacttaagcttcactttagctcctaa 22886728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 228 - 304
Target Start/End: Complemental strand, 13662216 - 13662140
Alignment:
Q  228 acatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaa 304  Q
    |||||||||||||||  |||||||||||||||||||| ||||||||  ||||||    ||||||||| |||||||||    
T  13662216 acatgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctcctaa 13662140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 228 - 304
Target Start/End: Complemental strand, 13720879 - 13720803
Alignment:
Q  228 acatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaa 304  Q
    |||||||||||||||  |||||||||||||||||||| ||||||||  ||||||    ||||||||| |||||||||    
T  13720879 acatgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctcctaa 13720803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 150 - 304
Target Start/End: Original strand, 2545184 - 2545339
Alignment:
Q  150 agcacgaattt-agcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaaattgcaatgaatgaa--catgattatgataaagac 246  Q
    ||||||||||| | ||||||||||| ||||||||   ||||||||||||||||||  || | ||||||||||  ||   |  |||||||||||| |||||    
T  2545184 agcacgaattttaacaacaattatcaattcattccaatcaacccatttcatacaa--caaggaaaattgcaaacaaaacaatcatgattatgatgaagac 2545281  T
Q  247 taacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaa 304  Q
    ||||||||||||||||| | | |||||   ||||  || |||||| ||||||||||||    
T  2545282 taacccccttaccttaggttatgattaattcaaatttaagcttcactttagctcctaa 2545339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 194 - 304
Target Start/End: Complemental strand, 3431245 - 3431134
Alignment:
Q  194 tttcatacaaatcatgaaaaattgcaatgaatgaac-atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaa 292  Q
    ||||||||||| || ||||||||||||  ||  ||  ||||||||||| |||||||||||||||||||||| | | ||| |  |||||| | |||||||     
T  3431245 tttcatacaaaccaagaaaaattgcaaacaaacaattatgattatgatgaagactaacccccttaccttaggttatgatcaatccaaacttgggcttcac 3431146  T
Q  293 tttagctcctaa 304  Q
    ||||||||||||    
T  3431145 tttagctcctaa 3431134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 150 - 203
Target Start/End: Original strand, 18612644 - 18612697
Alignment:
Q  150 agcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaa 203  Q
    |||||||||||| ||||||||||| ||||||||   ||||||||||||||||||    
T  18612644 agcacgaatttaacaacaattatcaattcattccaatcaacccatttcatacaa 18612697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 150 - 203
Target Start/End: Original strand, 22147676 - 22147729
Alignment:
Q  150 agcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaa 203  Q
    |||||||||||| ||||||||||| ||||||||   ||||||||||||||||||    
T  22147676 agcacgaatttaacaacaattatcaattcattccaatcaacccatttcatacaa 22147729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 101
Target Start/End: Complemental strand, 222826 - 222754
Alignment:
Q  29 aaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaat 101  Q
    ||||||| | |||| ||||||| |||||||||| |||||||  ||||| | |||||||||||| |||||||||    
T  222826 aaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaat 222754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 101
Target Start/End: Complemental strand, 736449 - 736377
Alignment:
Q  29 aaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaat 101  Q
    ||||||| | |||| ||||||| |||||||||| |||||||  ||||| | |||||||||||| |||||||||    
T  736449 aaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaat 736377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 101
Target Start/End: Complemental strand, 860344 - 860272
Alignment:
Q  29 aaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaat 101  Q
    ||||||| | |||| ||||||| |||||||||| |||||||  ||||| | |||||||||||| |||||||||    
T  860344 aaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaat 860272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 308
Target Start/End: Complemental strand, 22006209 - 22006129
Alignment:
Q  228 acatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctt 308  Q
    |||||||||||||||  ||||||||||||||||| || ||||||||   |||||    ||||||||| |||||||||||||    
T  22006209 acatgattatgataataactaacccccttacctttgaagaagattaactcaaactcttgcttcaattcagctcctaagctt 22006129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 262
Target Start/End: Complemental strand, 24716794 - 24716762
Alignment:
Q  230 atgattatgataaagactaacccccttacctta 262  Q
    |||||||||||||||||||||||||||||||||    
T  24716794 atgattatgataaagactaacccccttacctta 24716762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 67 - 160
Target Start/End: Original strand, 26011646 - 26011741
Alignment:
Q  67 tttcacata-tttaaacatgtaatttaaccaacaatcatacaattattatcaatt-catgcatacaaacatatcatcaaagttgtagcacgaattt 160  Q
    ||||||||| ||| |||||||||||| ||||||||  || ||||||| | ||||| ||||||| |||||||||||||| | ||  |||||||||||    
T  26011646 tttcacatactttgaacatgtaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatatcatcataattagagcacgaattt 26011741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 101
Target Start/End: Complemental strand, 691966 - 691909
Alignment:
Q  44 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaat 101  Q
    ||||||| |||||||||| |||||||  ||||| | |||||||||||| |||||||||    
T  691966 gcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaat 691909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 273
Target Start/End: Complemental strand, 16674341 - 16674296
Alignment:
Q  228 acatgattatgataaagactaacccccttaccttagatgaagatta 273  Q
    |||||||| ||||||  |||||||||||||||||||| ||||||||    
T  16674341 acatgattgtgataataactaacccccttaccttagaagaagatta 16674296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 261
Target Start/End: Complemental strand, 271343 - 271278
Alignment:
Q  194 tttcatacaaatcatgaaaaattgcaatgaatgaacatgattatgataaagactaacccccttacctt 261  Q
    ||||||||||  ||||| ||| ||||| || || |||||||||||||||  |||||||||||||||||    
T  271343 tttcatacaa--catgagaaaatgcaaagattgtacatgattatgataataactaacccccttacctt 271278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 230 - 262
Target Start/End: Original strand, 274766 - 274798
Alignment:
Q  230 atgattatgataaagactaacccccttacctta 262  Q
    |||||||||||||| ||||||||||||||||||    
T  274766 atgattatgataaaaactaacccccttacctta 274798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 230 - 262
Target Start/End: Complemental strand, 641083 - 641051
Alignment:
Q  230 atgattatgataaagactaacccccttacctta 262  Q
    |||||||||||||| ||||||||||||||||||    
T  641083 atgattatgataaaaactaacccccttacctta 641051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 261
Target Start/End: Original strand, 644577 - 644642
Alignment:
Q  194 tttcatacaaatcatgaaaaattgcaatgaatgaacatgattatgataaagactaacccccttacctt 261  Q
    ||||||||||  ||||| ||| ||||| || || |||||||||||||||  |||||||||||||||||    
T  644577 tttcatacaa--catgagaaaatgcaaagattgtacatgattatgataataactaacccccttacctt 644642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 230 - 262
Target Start/End: Complemental strand, 826889 - 826857
Alignment:
Q  230 atgattatgataaagactaacccccttacctta 262  Q
    |||||||||||||| ||||||||||||||||||    
T  826889 atgattatgataaaaactaacccccttacctta 826857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 261
Target Start/End: Original strand, 830312 - 830377
Alignment:
Q  194 tttcatacaaatcatgaaaaattgcaatgaatgaacatgattatgataaagactaacccccttacctt 261  Q
    ||||||||||  ||||| ||| ||||| || || |||||||||||||||  |||||||||||||||||    
T  830312 tttcatacaa--catgagaaaatgcaaagattgtacatgattatgataataactaacccccttacctt 830377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 261
Target Start/End: Complemental strand, 15319142 - 15319077
Alignment:
Q  194 tttcatacaaatcatgaaaaattgcaatgaatgaacatgattatgataaagactaacccccttacctt 261  Q
    ||||||||||  ||||| ||| ||||| || || |||||||||||||||  |||||||||||||||||    
T  15319142 tttcatacaa--catgagaaaatgcaaagattgtacatgattatgataataactaacccccttacctt 15319077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 261
Target Start/End: Complemental strand, 15499511 - 15499446
Alignment:
Q  194 tttcatacaaatcatgaaaaattgcaatgaatgaacatgattatgataaagactaacccccttacctt 261  Q
    ||||||||||  ||||| ||| ||||| || || |||||||||||||||  |||||||||||||||||    
T  15499511 tttcatacaa--catgagaaaatgcaaagattgtacatgattatgataataactaacccccttacctt 15499446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 264
Target Start/End: Original strand, 24549283 - 24549319
Alignment:
Q  228 acatgattatgataaagactaacccccttaccttaga 264  Q
    |||||||||||||||  ||||||||||||||||||||    
T  24549283 acatgattatgataatcactaacccccttaccttaga 24549319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 300; Significance: 1e-169; HSPs: 51)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 300; E-Value: 1e-169
Query Start/End: Original strand, 13 - 335
Target Start/End: Original strand, 20623069 - 20623392
Alignment:
Q  13 tcaagaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattat 112  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20623069 tcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattat 20623168  T
Q  113 tatcaattcatgcatacaaacatatcatcaaagttgtagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaa 212  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  20623169 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccattcattcatttcaacccatttcatccaaatcatgaaa 20623268  T
Q  213 aattgcaatgaatgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctttccc 312  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20623269 aattgcaaagaatgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctttccc 20623368  T
Q  313 aa-tggattcttcaagttcttctc 335  Q
    || |||||||||||||||||||||    
T  20623369 aattggattcttcaagttcttctc 20623392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 300; E-Value: 1e-169
Query Start/End: Original strand, 13 - 335
Target Start/End: Complemental strand, 21233691 - 21233368
Alignment:
Q  13 tcaagaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattat 112  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21233691 tcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattat 21233592  T
Q  113 tatcaattcatgcatacaaacatatcatcaaagttgtagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaa 212  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  21233591 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccattcattcatttcaacccatttcatccaaatcatgaaa 21233492  T
Q  213 aattgcaatgaatgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctttccc 312  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21233491 aattgcaaagaatgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctttccc 21233392  T
Q  313 aa-tggattcttcaagttcttctc 335  Q
    || |||||||||||||||||||||    
T  21233391 aattggattcttcaagttcttctc 21233368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 288; E-Value: 1e-161
Query Start/End: Original strand, 13 - 335
Target Start/End: Original strand, 16536297 - 16536620
Alignment:
Q  13 tcaagaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattat 112  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  16536297 tcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattat 16536396  T
Q  113 tatcaattcatgcatacaaacatatcatcaaagttgtagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaa 212  Q
    ||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  16536397 tataaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccattcattcatttcaacccatttcatccaaatcatgaaa 16536496  T
Q  213 aattgcaatgaatgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctttccc 312  Q
    |||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16536497 aattgcaaagaatgaacatgattatgataaagactaacccccttatcttagatgaagattagaccaaacctaggcttcaatttagctcctaagctttccc 16536596  T
Q  313 aa-tggattcttcaagttcttctc 335  Q
    || |||||||||||||||||||||    
T  16536597 aattggattcttcaagttcttctc 16536620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 288; E-Value: 1e-161
Query Start/End: Original strand, 13 - 335
Target Start/End: Original strand, 37052844 - 37053167
Alignment:
Q  13 tcaagaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattat 112  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  37052844 tcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcatttccacatattcaaacatgtaatttaaccaacaatcatacaattat 37052943  T
Q  113 tatcaattcatgcatacaaacatatcatcaaagttgtagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaa 212  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  37052944 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccattcattcatttcaacccatctcatccaaatcatgaaa 37053043  T
Q  213 aattgcaatgaatgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctttccc 312  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37053044 aattgcaaagaatgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctttccc 37053143  T
Q  313 aa-tggattcttcaagttcttctc 335  Q
    || |||||||||||||||||||||    
T  37053144 aattggattcttcaagttcttctc 37053167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 13 - 335
Target Start/End: Complemental strand, 25900568 - 25900246
Alignment:
Q  13 tcaagaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattat 112  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  25900568 tcaacaacaacatgtcaa-ttcatccattttgcacaattttcataacttttcattttcacatattcaaacatataatttaaccaacaatcatacaattat 25900470  T
Q  113 tatcaattcatgcatacaaacatatcatcaaagttgtagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaa 212  Q
     ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  25900469 catcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccgttcattcatttcaacccatttcatccaaatcatgaaa 25900370  T
Q  213 aattgcaatgaatgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctttccc 312  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  25900369 aattgcaaagaatgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggctttaatttagctcctaagctttccc 25900270  T
Q  313 aa-tggattcttcaagttcttctc 335  Q
    || |||||||||||||| ||||||    
T  25900269 aattggattcttcaagtccttctc 25900246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 44 - 304
Target Start/End: Original strand, 34939408 - 34939669
Alignment:
Q  44 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 143  Q
    ||||||||||||||||||  |||||| ||||| || ||||||| |||| |||||||||||||||||||| ||||||||||||||||||||||| |||||     
T  34939408 gcacaattttcataacttcacatttttacataattgaacatgtgatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcac 34939507  T
Q  144 agttgtagcacgaatttagcaacaattatccattcattcatttcaacccat-ttcatacaaatcatgaaaaattgcaatgaatgaacatgattatgataa 242  Q
    ||||  |||||||||||||||||| ||||||||| ||||| |||||||||| |||||||||   |||| |||||||||| |||||||||||||||||  |    
T  34939508 agttagagcacgaatttagcaacagttatccatttattcaattcaacccatattcatacaacaaatgagaaattgcaataaatgaacatgattatgaaga 34939607  T
Q  243 agactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaa 304  Q
    | ||||||||||||||||||| | | |||||   || || ||| ||||| ||||||||||||    
T  34939608 acactaacccccttaccttaggttatgattaattcacacttagacttcactttagctcctaa 34939669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 44 - 176
Target Start/End: Original strand, 23507096 - 23507228
Alignment:
Q  44 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 143  Q
    |||||||||||| ||||| ||||||| |||||||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||     
T  23507096 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcac 23507195  T
Q  144 agttgtagcacgaatttagcaacaattatccat 176  Q
    |  || |||||||||||||||||||||||||||    
T  23507196 aaatggagcacgaatttagcaacaattatccat 23507228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 45 - 175
Target Start/End: Complemental strand, 18531198 - 18531068
Alignment:
Q  45 cacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaa 144  Q
    ||||||||||| |||||  |||||| ||||| || |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |    
T  18531198 cacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcaca 18531099  T
Q  145 gttgtagcacgaatttagcaacaattatcca 175  Q
    |||| ||||||||||||||||||||||||||    
T  18531098 gttggagcacgaatttagcaacaattatcca 18531068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 44 - 307
Target Start/End: Complemental strand, 27182679 - 27182426
Alignment:
Q  44 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 143  Q
    |||||||||||| ||||| ||||||   | ||||| |||||||||||| | |||||||||||||||||| |||| ||||||||||||||||||||||||     
T  27182679 gcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcatcaacaatcatacaattatcatcagttcatgcatacaaacatatcatcac 27182580  T
Q  144 agttgtagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaaattgcaatgaatgaacatgattatgataaa 243  Q
    ||||| |||| ||||||||||||||||||||||| || ||    ||   | |||||||||    |||||| || |||  |||||  ||||||||||| ||    
T  27182579 agttggagcatgaatttagcaacaattatccatt-atgca----aa---aattcatacaacatttgaaaatttacaa--aatgatgatgattatgatgaa 27182490  T
Q  244 gactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagct 307  Q
    |||||||||||||||||||| | |||||||  || ||| |||||||||||||||||||||||||    
T  27182489 gactaacccccttaccttaggtaaagattaatcccaacttaggcttcaatttagctcctaagct 27182426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 79 - 335
Target Start/End: Original strand, 32950861 - 32951119
Alignment:
Q  79 aaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttgtagcacgaatttagcaacaattatccattc 178  Q
    ||||||||||||| | | |||||||||||||||| ||||| |||| || || || ||| ||||| ||||  |||||||||||| ||||||||||| ||||    
T  32950861 aaacatgtaatttcaaccacaatcatacaattatcatcaaatcatacacacgaaaataacatcacagttagagcacgaatttaacaacaattatcaattc 32950960  T
Q  179 attcatttcaacccatttcatacaaatcatgaaaaattgcaatgaatgaacatgattatgataaagactaacccccttaccttagatgaagattagacca 278  Q
    ||||   ||||||||||||||||||   | || || ||||||| | |||||||| ||||||| ||||||||||||||||||||| || | |||||   ||    
T  32950961 attccaatcaacccatttcatacaacaaaggagaagttgcaataattgaacatggttatgatgaagactaacccccttaccttaaataatgattaattca 32951060  T
Q  279 aacctaggcttcaatttagctcctaagctttccc--aatggattcttcaagttcttctc 335  Q
    ||| ||| |||||||||||||||||||||| |||  | | ||||||||||| |||||||    
T  32951061 aacttagacttcaatttagctcctaagcttaccccaatttgattcttcaagctcttctc 32951119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 44 - 175
Target Start/End: Complemental strand, 22053965 - 22053834
Alignment:
Q  44 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 143  Q
    |||||||||||| |||||  |||||| ||||| || |||||||||||| |||||||||||||||| ||| |||||||||| ||||||||||||||||||     
T  22053965 gcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaactatcatcaattcatacatacaaacatatcatcac 22053866  T
Q  144 agttgtagcacgaatttagcaacaattatcca 175  Q
    ||||| ||||||||||||||||||||||||||    
T  22053865 agttggagcacgaatttagcaacaattatcca 22053834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 44 - 164
Target Start/End: Complemental strand, 29188404 - 29188284
Alignment:
Q  44 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 143  Q
    |||| ||||||| ||||| ||||||| |||||||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||     
T  29188404 gcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcac 29188305  T
Q  144 agttgtagcacgaatttagca 164  Q
    |||   ||||||||| |||||    
T  29188304 agtaagagcacgaatctagca 29188284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 46 - 142
Target Start/End: Original strand, 27009975 - 27010071
Alignment:
Q  46 acaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatca 142  Q
    ||||| |||||||||| ||||||| ||||||||||||||||||||| ||||||| ||||||||| || ||||||||||||||||||||||| |||||    
T  27009975 acaatattcataacttatcatttttacatatttaaacatgtaatttcaccaacactcatacaatcatcatcaattcatgcatacaaacataacatca 27010071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 228 - 335
Target Start/End: Complemental strand, 1219471 - 1219363
Alignment:
Q  228 acatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctttcccaa-tggattcttcaa 326  Q
    |||||||||||||||  |||||||||||||||||||| ||||||||  ||||||    ||||||||||||||||||||||| ||||| ||||||||||||    
T  1219471 acatgattatgataatcactaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctcctaagcttacccaattggattcttcaa 1219372  T
Q  327 gttcttctc 335  Q
    |||||||||    
T  1219371 gttcttctc 1219363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 196 - 307
Target Start/End: Complemental strand, 23981471 - 23981360
Alignment:
Q  196 tcatacaaatcatgaaaaattgcaatgaatgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaattt 295  Q
    |||||||||| ||  ||||||||||| | |||  |||||| |||| ||||||||||||||||||| ||||||||||||  |||||| |||||||||||||    
T  23981471 tcatacaaataattgaaaattgcaataagtgattatgattttgatgaagactaacccccttacctaagatgaagattaatccaaacttaggcttcaattt 23981372  T
Q  296 agctcctaagct 307  Q
    ||||||||||||    
T  23981371 agctcctaagct 23981360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 231 - 335
Target Start/End: Original strand, 23328865 - 23328970
Alignment:
Q  231 tgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctttcccaa-tggattcttcaagtt 329  Q
    ||||||||||||  |||||||||||||||||||| ||||||||  ||||||    ||||||||||||||||||||||| ||||| |||||||||||||||    
T  23328865 tgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctcctaagcttacccaattggattcttcaagtt 23328964  T
Q  330 cttctc 335  Q
    ||||||    
T  23328965 cttctc 23328970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 231 - 335
Target Start/End: Original strand, 24616469 - 24616574
Alignment:
Q  231 tgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctttcccaa-tggattcttcaagtt 329  Q
    ||||||||||||  |||||||||||||||||||| ||||||||  ||||||    ||||||||||||||||||||||| ||||| |||||||||||||||    
T  24616469 tgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctcctaagcttacccaattggattcttcaagtt 24616568  T
Q  330 cttctc 335  Q
    ||||||    
T  24616569 cttctc 24616574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 231 - 335
Target Start/End: Original strand, 24712845 - 24712950
Alignment:
Q  231 tgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctttcccaa-tggattcttcaagtt 329  Q
    ||||||||||||  |||||||||||||||||||| ||||||||  ||||||    ||||||||||||||||||||||| ||||| |||||||||||||||    
T  24712845 tgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctcctaagcttacccaattggattcttcaagtt 24712944  T
Q  330 cttctc 335  Q
    ||||||    
T  24712945 cttctc 24712950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 231 - 335
Target Start/End: Original strand, 24745863 - 24745968
Alignment:
Q  231 tgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctttcccaa-tggattcttcaagtt 329  Q
    ||||||||||||  |||||||||||||||||||| ||||||||  ||||||    ||||||||||||||||||||||| ||||| |||||||||||||||    
T  24745863 tgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctcctaagcttacccaattggattcttcaagtt 24745962  T
Q  330 cttctc 335  Q
    ||||||    
T  24745963 cttctc 24745968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 29 - 164
Target Start/End: Complemental strand, 22366616 - 22366481
Alignment:
Q  29 aaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcata 128  Q
    ||||||| | |||| ||||||| |||||||||| |||||||  ||||| | |||||||||||| ||||||||| |||||| ||  |||||||||||||||    
T  22366616 aaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcata 22366517  T
Q  129 caaacatatcatcaaagttgtagcacgaatttagca 164  Q
    |||||||| ||||| ||    |||||||||||||||    
T  22366516 caaacataacatcacagcaagagcacgaatttagca 22366481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 44 - 142
Target Start/End: Complemental strand, 43443515 - 43443417
Alignment:
Q  44 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatca 142  Q
    ||||||| |||||||||| |||||||  ||||| | |||||||||||| |||||||||||||||| ||  ||||||||||||||||||||||| |||||    
T  43443515 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatca 43443417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 29 - 142
Target Start/End: Complemental strand, 4200120 - 4200007
Alignment:
Q  29 aaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcata 128  Q
    ||||||| | |||| ||| ||| |||||||||| |||||||  ||||| | |||||||||||| |||||||||||||||| ||  |||||||||||||||    
T  4200120 aaattcaccaatttagcataatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcata 4200021  T
Q  129 caaacatatcatca 142  Q
    |||||||| |||||    
T  4200020 caaacataacatca 4200007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 29 - 142
Target Start/End: Complemental strand, 18778127 - 18778014
Alignment:
Q  29 aaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcata 128  Q
    ||||||| | |||| ||||||| |||||||||| |||||||  ||||| | |||||||||||| ||||||||| |||||| ||  |||||||||||||||    
T  18778127 aaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcata 18778028  T
Q  129 caaacatatcatca 142  Q
    |||||||| |||||    
T  18778027 caaacataacatca 18778014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 44 - 164
Target Start/End: Original strand, 19500031 - 19500151
Alignment:
Q  44 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 143  Q
    ||||||| |||||||||| |||||||  ||||| | |||||||||||| ||||||||| |||||| ||  ||||||||||||||||||||||| |||||     
T  19500031 gcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacatcac 19500130  T
Q  144 agttgtagcacgaatttagca 164  Q
    ||    |||||||||||||||    
T  19500131 agcaagagcacgaatttagca 19500151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 44 - 164
Target Start/End: Original strand, 25426760 - 25426880
Alignment:
Q  44 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 143  Q
    ||||||| |||||||||| |||||||  ||||| | |||||||||||| ||||||||| |||||| ||  ||||||||||||||||||||||| |||||     
T  25426760 gcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacatcac 25426859  T
Q  144 agttgtagcacgaatttagca 164  Q
    ||    |||||||||||||||    
T  25426860 agcaagagcacgaatttagca 25426880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 230 - 307
Target Start/End: Original strand, 21651018 - 21651095
Alignment:
Q  230 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagct 307  Q
    |||||||||||||| | |||||||||||||||||||||||||||  || ||| ||| |||||||||||||||||||||    
T  21651018 atgattatgataaatattaacccccttaccttagatgaagattaatcccaacttagacttcaatttagctcctaagct 21651095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 44 - 164
Target Start/End: Original strand, 12506 - 12626
Alignment:
Q  44 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 143  Q
    ||||||| |||||||||| ||| |||  ||||| | |||||||||||| ||||||||| |||||| ||  ||||||||||||||||||||||| |||||     
T  12506 gcacaatcttcataacttatcacttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacatcac 12605  T
Q  144 agttgtagcacgaatttagca 164  Q
    ||    |||||||||||||||    
T  12606 agcaagagcacgaatttagca 12626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 44 - 164
Target Start/End: Complemental strand, 21073715 - 21073595
Alignment:
Q  44 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 143  Q
    ||||||| |||||||||| |||||||  ||||| | |||||||||||| ||||||||| |||||| ||  ||| ||||||||||||||||||| |||||     
T  21073715 gcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatccattcatgcatacaaacataacatcac 21073616  T
Q  144 agttgtagcacgaatttagca 164  Q
    ||    |||||||||||||||    
T  21073615 agcaagagcacgaatttagca 21073595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 232 - 307
Target Start/End: Original strand, 2032135 - 2032210
Alignment:
Q  232 gattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagct 307  Q
    ||||||||| || ||||||||||||||||||||| | |||||  |||||| |||||||||||||||||||||||||    
T  2032135 gattatgatgaaaactaacccccttaccttagataaggattaacccaaacttaggcttcaatttagctcctaagct 2032210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 194 - 307
Target Start/End: Complemental strand, 108797 - 108683
Alignment:
Q  194 tttcatacaaatcatgaaaaattgcaatgaatgaac-atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaa 292  Q
    ||||||||||| || ||||||||||||  ||  ||  ||||||||||| |||||||||||||||||||||||| |||||||  || ||| |||||||||     
T  108797 tttcatacaaaccaagaaaaattgcaaacaaacaattatgattatgatgaagactaacccccttaccttagataaagattaatcccaacttaggcttcac 108698  T
Q  293 tttagctcctaagct 307  Q
    |||| ||||||||||    
T  108697 tttacctcctaagct 108683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 186 - 335
Target Start/End: Original strand, 23514825 - 23514974
Alignment:
Q  186 tcaacccattt-catacaaatcatgaaaaattgcaatgaatgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaaaccta 284  Q
    ||||||||||| |||||||  ||||| ||| |||||  | |||||||||||||||| |  |||||||||||||||||||| ||||||||  ||||||       
T  23514825 tcaacccattttcatacaa--catgagaaaatgcaaaaattgaacatgattatgatgataactaacccccttaccttagaagaagattaacccaaactct 23514922  T
Q  285 ggcttcaatttagctcctaagctt-tcccaatggattcttcaagttcttctc 335  Q
     ||||||||| |||||||||||||  |||||| ||||| ||||||| |||||    
T  23514923 tgcttcaattcagctcctaagcttaccccaattgattcctcaagttattctc 23514974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 228 - 335
Target Start/End: Complemental strand, 35791049 - 35790941
Alignment:
Q  228 acatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctt-tcccaatggattcttcaa 326  Q
    |||||||||||||||  |||||||||||||||||||| ||||||||  ||||||    ||||||||| |||||||||||||  |||||| ||||| ||||    
T  35791049 acatgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaa 35790950  T
Q  327 gttcttctc 335  Q
    | |||||||    
T  35790949 gctcttctc 35790941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 230 - 308
Target Start/End: Original strand, 23507270 - 23507348
Alignment:
Q  230 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctt 308  Q
    |||||||||||||||||||||||||||||||||||| |||||||   | ||| || |||||| |||| |||||||||||    
T  23507270 atgattatgataaagactaacccccttaccttagataaagattaattccaacttatgcttcactttaactcctaagctt 23507348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 150 - 304
Target Start/End: Original strand, 17909743 - 17909897
Alignment:
Q  150 agcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaaattgc-aatgaatgaa-catgattatgataaagact 247  Q
    |||||||||||| ||||||||||| ||||||||   ||||||||||||||||||  || | |||||||| ||  ||  || |||||||||||  || |||    
T  17909743 agcacgaatttaacaacaattatcaattcattccaatcaacccatttcatacaa--caaggaaaattgctaacaaaacaatcatgattatgaagaacact 17909840  T
Q  248 aacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaa 304  Q
    |||||||||||||||| | | |||||  |||||| ||||||||| |||| |||||||    
T  17909841 aacccccttaccttaggttatgattaatccaaacttaggcttcactttaactcctaa 17909897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 230 - 307
Target Start/End: Original strand, 21205249 - 21205325
Alignment:
Q  230 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagct 307  Q
    |||||||||||||||||||| ||| ||| |||||||||||||||   | ||| |||||||||||||||||||||||||    
T  21205249 atgattatgataaagactaatccc-ttatcttagatgaagattaattccaacttaggcttcaatttagctcctaagct 21205325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 230 - 303
Target Start/End: Original strand, 25005137 - 25005210
Alignment:
Q  230 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctccta 303  Q
    ||||||||||| ||||||||||||||||| |||||| | |||||  |||||| ||||||||| |||||||||||    
T  25005137 atgattatgatgaagactaacccccttactttagataatgattaatccaaacttaggcttcactttagctccta 25005210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 230 - 301
Target Start/End: Original strand, 7529228 - 7529299
Alignment:
Q  230 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcc 301  Q
    ||||||||||  |||||||||||||||||||||||| | |||||  |||||| ||||||||| |||||||||    
T  7529228 atgattatgaagaagactaacccccttaccttagataatgattaatccaaacttaggcttcactttagctcc 7529299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 230 - 273
Target Start/End: Original strand, 16105967 - 16106010
Alignment:
Q  230 atgattatgataaagactaacccccttaccttagatgaagatta 273  Q
    ||||||||||||||||||||||||||||||||||| ||||||||    
T  16105967 atgattatgataaagactaacccccttaccttagaagaagatta 16106010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 232 - 307
Target Start/End: Complemental strand, 18531018 - 18530943
Alignment:
Q  232 gattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagct 307  Q
    ||||||||| |||||||||||||||||||||||| | |||||  |  ||| ||||||||| |||||||||||||||    
T  18531018 gattatgatgaagactaacccccttaccttagattatgattaacctcaacttaggcttcactttagctcctaagct 18530943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 228 - 305
Target Start/End: Original strand, 7425629 - 7425706
Alignment:
Q  228 acatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaag 305  Q
    |||||||||||||||  |||||||||||||||||||| ||||||||  ||||||    ||||||||| ||||||||||    
T  7425629 acatgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctcctaag 7425706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 230 - 303
Target Start/End: Original strand, 11343008 - 11343081
Alignment:
Q  230 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctccta 303  Q
    |||||||||||||| ||||||||||||||||| || ||||||||  || |||||  ||||||||| ||||||||    
T  11343008 atgattatgataaaaactaacccccttacctttgaagaagattaaccctaacctctgcttcaattcagctccta 11343081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 230 - 307
Target Start/End: Complemental strand, 22053785 - 22053708
Alignment:
Q  230 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagct 307  Q
    ||||||||||| |||||||||||||||||||||||| | |||||  |  ||| ||| ||||| |||||||||||||||    
T  22053785 atgattatgatgaagactaacccccttaccttagattatgattaacctcaacttagacttcactttagctcctaagct 22053708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 228 - 305
Target Start/End: Original strand, 27010144 - 27010221
Alignment:
Q  228 acatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaag 305  Q
    |||||||| ||||||  |||||||||||||||||||| ||||||||  ||||||    ||||||||| ||||||||||    
T  27010144 acatgattgtgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctcctaag 27010221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 261
Target Start/End: Complemental strand, 36989753 - 36989688
Alignment:
Q  194 tttcatacaaatcatgaaaaattgcaatgaatgaacatgattatgataaagactaacccccttacctt 261  Q
    ||||||||||  ||||| ||||||||| || || |||||||||||||||  |||||||||||||||||    
T  36989753 tttcatacaa--catgagaaattgcaaagattgtacatgattatgataataactaacccccttacctt 36989688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 194 - 304
Target Start/End: Complemental strand, 9730347 - 9730236
Alignment:
Q  194 tttcatacaaatcatgaaaaattgcaatgaatgaac-atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaa 292  Q
    ||||||||||| || ||||||||||||  ||  ||  ||||||||||| |||||||||||||||||||||| | | ||| |   ||||| | |||||||     
T  9730347 tttcatacaaaccaagaaaaattgcaaacaaacaattatgattatgatgaagactaacccccttaccttaggttatgatcaattcaaacttgggcttcac 9730248  T
Q  293 tttagctcctaa 304  Q
    ||||||||||||    
T  9730247 tttagctcctaa 9730236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 63 - 160
Target Start/End: Complemental strand, 21310808 - 21310709
Alignment:
Q  63 tcattttcacata-tttaaacatgtaatttaaccaacaatcatacaattattatcaatt-catgcatacaaacatatcatcaaagttgtagcacgaattt 160  Q
    ||||||||||| | ||| |||||| ||||| ||||||||  || ||||||| | ||||| ||||||| |||||||||||||| ||||  |||||||||||    
T  21310808 tcattttcacaaactttgaacatgcaatttcaccaacaacaattcaattatcaccaatttcatgcattcaaacatatcatcatagttagagcacgaattt 21310709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 261
Target Start/End: Complemental strand, 11212057 - 11211983
Alignment:
Q  186 tcaacccattt-catacaaatcatgaaaaattgcaatgaatgaacatgattatgataaagactaacccccttacctt 261  Q
    ||||||||||| |||||||  ||||| ||| |||||  | ||||||||||||||||||  |||||||||||||||||    
T  11212057 tcaacccattttcatacaa--catgagaaaatgcaaaaattgaacatgattatgataataactaacccccttacctt 11211983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 160
Target Start/End: Original strand, 29918131 - 29918212
Alignment:
Q  80 aacatgtaatttaaccaacaatcatacaattattatcaatt-catgcatacaaacatatcatcaaagttgtagcacgaattt 160  Q
    |||||| ||||| ||||||||  || ||||||| ||||||| |||| || |||||||||||||| | ||| |||||||||||    
T  29918131 aacatgcaatttcaccaacaacaattcaattatcatcaatttcatgtattcaaacatatcatcataattggagcacgaattt 29918212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 261
Target Start/End: Complemental strand, 21932364 - 21932299
Alignment:
Q  194 tttcatacaaatcatgaaaaattgcaatgaatgaacatgattatgataaagactaacccccttacctt 261  Q
    ||||||||||  ||||| ||| ||||| || || |||||||||||||||  |||||||||||||||||    
T  21932364 tttcatacaa--catgagaaaatgcaaagattgtacatgattatgataataactaacccccttacctt 21932299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 261
Target Start/End: Complemental strand, 21938534 - 21938469
Alignment:
Q  194 tttcatacaaatcatgaaaaattgcaatgaatgaacatgattatgataaagactaacccccttacctt 261  Q
    ||||||||||  ||||| ||| ||||| || || |||||||||||||||  |||||||||||||||||    
T  21938534 tttcatacaa--catgagaaaatgcaaagattgtacatgattatgataataactaacccccttacctt 21938469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 261
Target Start/End: Original strand, 35582309 - 35582374
Alignment:
Q  194 tttcatacaaatcatgaaaaattgcaatgaatgaacatgattatgataaagactaacccccttacctt 261  Q
    ||||||||||  ||||| ||| ||||| || || |||||||||||||||  |||||||||||||||||    
T  35582309 tttcatacaa--catgagaaaatgcaaagattgtacatgattatgataataactaacccccttacctt 35582374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 300; Significance: 1e-169; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 300; E-Value: 1e-169
Query Start/End: Original strand, 13 - 335
Target Start/End: Complemental strand, 19689564 - 19689241
Alignment:
Q  13 tcaagaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattat 112  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19689564 tcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattat 19689465  T
Q  113 tatcaattcatgcatacaaacatatcatcaaagttgtagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaa 212  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19689464 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaa 19689365  T
Q  213 aattgcaatgaatgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctttccc 312  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  19689364 aattgcaaagaatgaacatgattatgataaagactaacccccttaccttaaatgaagattagaccaaacctaggcttcaatttagctcctaagctttccc 19689265  T
Q  313 aa-tggattcttcaagttcttctc 335  Q
    || |||||||||||||||||||||    
T  19689264 aattggattcttcaagttcttctc 19689241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 300; E-Value: 1e-169
Query Start/End: Original strand, 13 - 335
Target Start/End: Original strand, 23820171 - 23820494
Alignment:
Q  13 tcaagaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattat 112  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23820171 tcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattat 23820270  T
Q  113 tatcaattcatgcatacaaacatatcatcaaagttgtagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaa 212  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  23820271 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccattcattcatttcaacccatttcatccaaatcatgaaa 23820370  T
Q  213 aattgcaatgaatgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctttccc 312  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23820371 aattgcaaagaatgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctttccc 23820470  T
Q  313 aa-tggattcttcaagttcttctc 335  Q
    || |||||||||||||||||||||    
T  23820471 aattggattcttcaagttcttctc 23820494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 296; E-Value: 1e-166
Query Start/End: Original strand, 13 - 335
Target Start/End: Complemental strand, 14906603 - 14906280
Alignment:
Q  13 tcaagaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattat 112  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  14906603 tcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattat 14906504  T
Q  113 tatcaattcatgcatacaaacatatcatcaaagttgtagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaa 212  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  14906503 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccattcattcatttcaacccatttcatccaaatcatgaaa 14906404  T
Q  213 aattgcaatgaatgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctttccc 312  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14906403 aattgcaaagaatgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctttccc 14906304  T
Q  313 aa-tggattcttcaagttcttctc 335  Q
    || |||||||||||||||||||||    
T  14906303 aattggattcttcaagttcttctc 14906280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 13 - 335
Target Start/End: Original strand, 20015111 - 20015434
Alignment:
Q  13 tcaagaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattat 112  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  20015111 tcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcacacaattat 20015210  T
Q  113 tatcaattcatgcatacaaacatatcatcaaagttgtagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaa 212  Q
    ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||  |||||||||||    
T  20015211 tatcaattcatgcatgcaaacatatcatcaaagttggagcacgaatttagcaacaattatccattcattcatttcaaccaatttcatctaaatcatgaaa 20015310  T
Q  213 aattgcaatgaatgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctttccc 312  Q
    |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  20015311 aattgcaaagaatgaacatgatcatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagttttccc 20015410  T
Q  313 aa-tggattcttcaagttcttctc 335  Q
    || |||||||||||||||||||||    
T  20015411 aattggattcttcaagttcttctc 20015434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 44 - 335
Target Start/End: Complemental strand, 17396784 - 17396493
Alignment:
Q  44 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 143  Q
    ||||||| |||||||||| ||||||| || |||||||||||||||||| ||||||||||||||||| || | |||||||||||||||| |||||||||||    
T  17396784 gcacaatattcataacttatcatttttacttatttaaacatgtaatttcaccaacaatcatacaatcatcaacaattcatgcatacaa-catatcatcaa 17396686  T
Q  144 agttgtagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaaattgcaatgaatgaacatgattatgataaa 243  Q
    ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  17396685 agttggagcacgaatttagcaacaattatccattcattcatgtcaacccatttcatacaaatcatgaaaaattgcaaagaatgaacatgattatggtaaa 17396586  T
Q  244 gactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctttcccaa-tggattcttcaagttcttctc 335  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||  ||||| |||||||||||||||||||||    
T  17396585 gactaacccccttaccttagatgaagattagaccaaacctaggctttaatttagctcctaagctcacccaattggattcttcaagttcttctc 17396493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 44 - 335
Target Start/End: Complemental strand, 25265522 - 25265228
Alignment:
Q  44 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 143  Q
    |||||||||||| |||||  |||||| ||||| || |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||||    
T  25265522 gcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcaa 25265423  T
Q  144 agttgtagcacgaatttagcaacaattatccattcattcatttcaacccat-ttcatacaaatcatgaaaaattgcaatgaatgaacatgattatgataa 242  Q
    ||||  |||||||||||||||||||||||||||| ||||| |||||||||| |||||||||   |||| |||||||||| |||||||||||||||||| |    
T  25265422 agttagagcacgaatttagcaacaattatccatttattcaattcaacccatattcatacaacaaatgagaaattgcaataaatgaacatgattatgatga 25265323  T
Q  243 agactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctttccc--aatggattcttcaagttcttctc 335  Q
    |||||||||||||||| |||||| | |||||  |||||||||||||||| |||||||||||||||| |||  | | ||||||||||| |||||||    
T  25265322 agactaacccccttacattagataatgattaatccaaacctaggcttcactttagctcctaagcttaccccaatttgattcttcaagctcttctc 25265228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 45 - 263
Target Start/End: Complemental strand, 7507975 - 7507756
Alignment:
Q  45 cacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaa 144  Q
    ||||||||||||||||| | ||||| |||||||| |||||||||||| |||||||||||||||||||| ||||||||||||| |  || ||| ||||| |    
T  7507975 cacaattttcataacttattatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcacaagaaaatagcatcaca 7507876  T
Q  145 gttgtagcacgaatttagcaacaattatccattcattcatttcaacccat-ttcatacaaatcatgaaaaattgcaatgaatgaacatgattatgataaa 243  Q
         |||||||||||||||| |||||| |||||||||| |||||||||| |||||||||   |||| |||||||||| |||||||||||||||||| ||    
T  7507875 acaagagcacgaatttagcaataattattcattcattcaattcaacccatattcatacaacaaatgagaaattgcaataaatgaacatgattatgatgaa 7507776  T
Q  244 gactaacccccttaccttag 263  Q
    ||||||||||||||||||||    
T  7507775 gactaacccccttaccttag 7507756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 45 - 307
Target Start/End: Original strand, 462870 - 463120
Alignment:
Q  45 cacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaa 144  Q
    ||||||||||| ||||| ||||||| |||||||| |||||||||||| |||||||||| ||||||||| ||||||||||||||||||| ||||||||| |    
T  462870 cacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaatatatcatcaca 462969  T
Q  145 gttgtagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaaattgcaatgaatgaacatgattatgataaag 244  Q
    |||| ||||||||||||||||||||||||||          | | |  | |||||||||    |||||| || |||  |||||  |||||||||||||||    
T  462970 gttggagcacgaatttagcaacaattatcca----------taagcaaaattcatacaacatttgaaaatttacaa--aatgatgatgattatgataaag 463057  T
Q  245 actaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagct 307  Q
    ||||||||||||||||||||| |||||||  || ||| |||||||||||||||||||||||||    
T  463058 actaacccccttaccttagataaagattaatcccaacttaggcttcaatttagctcctaagct 463120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 44 - 307
Target Start/End: Complemental strand, 36982573 - 36982319
Alignment:
Q  44 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 143  Q
    |||||||||||| ||||| ||||||| |||||||| |||||||||||| |||| ||||| ||||||||| ||||||||||| |||||||||||||||||     
T  36982573 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccagcaatcttacaattatcatcaattcatgaatacaaacatatcatcac 36982474  T
Q  144 agttgtagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaaattgcaatgaatgaacatgattatgataaa 243  Q
    ||||| |||||||||||||||||||||||||||| || ||    ||   | |||||||||    |||||| || |||  |||||  ||||||||||||||    
T  36982473 agttggagcacgaatttagcaacaattatccatt-atgca----aa---aattcatacaacatttgaaaatttacaa-aaatgatgatgattatgataaa 36982383  T
Q  244 gactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagct 307  Q
    |||||||||||||||||||||| |||| ||   | ||| |||||||||||||||||||| ||||    
T  36982382 gactaacccccttaccttagataaagactaataccaacttaggcttcaatttagctcctcagct 36982319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 44 - 307
Target Start/End: Original strand, 8891373 - 8891626
Alignment:
Q  44 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 143  Q
    |||||||||||| ||||| ||||||   | ||||| ||||||||||||  ||||||||||||||||||| |||||||||||||||||||||||| ||||     
T  8891373 gcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcgccaacaatcatacaattatcatcaattcatgcatacaaacatattatcac 8891472  T
Q  144 agttgtagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaaattgcaatgaatgaacatgattatgataaa 243  Q
    ||||| |||||||||||||||||||||||||||| || ||    ||   | |||||||||    |||||| || |||  |||||  ||||||||||||||    
T  8891473 agttggagcacgaatttagcaacaattatccatt-atgca----aa---aattcatacaacatttgaaaatttacaa--aatgatgatgattatgataaa 8891562  T
Q  244 gactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagct 307  Q
    |||||||||| ||||||||||| |||||||  || ||| ||||||||||||||| |||||||||    
T  8891563 gactaacccctttaccttagataaagattaatcccaacttaggcttcaatttagttcctaagct 8891626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 44 - 177
Target Start/End: Complemental strand, 19794836 - 19794703
Alignment:
Q  44 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 143  Q
    |||||||||||| ||||| ||||||   | ||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||     
T  19794836 gcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcac 19794737  T
Q  144 agttgtagcacgaatttagcaacaattatccatt 177  Q
    ||||| |||||||||||| | |||||||||||||    
T  19794736 agttggagcacgaatttaacgacaattatccatt 19794703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 44 - 176
Target Start/End: Complemental strand, 20627445 - 20627313
Alignment:
Q  44 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 143  Q
    |||||||||||| || || ||||||| ||||||||  ||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||     
T  20627445 gcacaattttcacaagttatcatttttacatatttggacatgtaatttcaccaacaatcatacaattatcatcaattcgtgcatacaaacatatcatcac 20627346  T
Q  144 agttgtagcacgaatttagcaacaattatccat 176  Q
    ||||| |||||||||||| ||||||||||||||    
T  20627345 agttggagcacgaatttaacaacaattatccat 20627313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 44 - 175
Target Start/End: Complemental strand, 24341521 - 24341390
Alignment:
Q  44 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 143  Q
    |||||||||||| |||||  |||||| ||||| || ||||| |||||| |||||||||||||||||||| |||||||||||||||||||||||||||||     
T  24341521 gcacaattttcacaacttcacatttttacataattgaacatataatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcac 24341422  T
Q  144 agttgtagcacgaatttagcaacaattatcca 175  Q
    ||||| |||| |||||||||||||||||||||    
T  24341421 agttgaagcatgaatttagcaacaattatcca 24341390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 44 - 175
Target Start/End: Complemental strand, 43643089 - 43642958
Alignment:
Q  44 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 143  Q
    |||||||||||| |||||  |||||   | ||||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||     
T  43643089 gcacaattttcacaacttaacatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcac 43642990  T
Q  144 agttgtagcacgaatttagcaacaattatcca 175  Q
    | ||| ||||| ||||||||||||||||||||    
T  43642989 aattggagcacaaatttagcaacaattatcca 43642958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 228 - 335
Target Start/End: Complemental strand, 12641593 - 12641485
Alignment:
Q  228 acatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctttcccaa-tggattcttcaa 326  Q
    |||||||||||||||  |||||||||||||||||||||||||||||  ||||||    ||||||||||||||||||||||| ||||| ||||||||||||    
T  12641593 acatgattatgataataactaacccccttaccttagatgaagattaacccaaactcttgcttcaatttagctcctaagcttacccaattggattcttcaa 12641494  T
Q  327 gttcttctc 335  Q
    |||||||||    
T  12641493 gttcttctc 12641485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 228 - 335
Target Start/End: Complemental strand, 12635819 - 12635711
Alignment:
Q  228 acatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctttcccaa-tggattcttcaa 326  Q
    |||||||||||||||  |||||||||||||||||||| ||||||||  ||||||    ||||||||||||||||||||||| ||||| ||||||||||||    
T  12635819 acatgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctcctaagcttacccaattggattcttcaa 12635720  T
Q  327 gttcttctc 335  Q
    |||||||||    
T  12635719 gttcttctc 12635711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 228 - 335
Target Start/End: Original strand, 12728697 - 12728805
Alignment:
Q  228 acatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctttcccaa-tggattcttcaa 326  Q
    |||||||||||||||  |||||||||||||||||||| ||||||||  ||||||    ||||||||||||||||||||||| ||||| ||||||||||||    
T  12728697 acatgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctcctaagcttacccaattggattcttcaa 12728796  T
Q  327 gttcttctc 335  Q
    |||||||||    
T  12728797 gttcttctc 12728805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 228 - 335
Target Start/End: Original strand, 34824780 - 34824888
Alignment:
Q  228 acatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctttcccaa-tggattcttcaa 326  Q
    |||||||||||||||  |||||||||||||||||||| ||||||||  ||||||    ||||||||||||||||||||||| ||||| ||||||||||||    
T  34824780 acatgattatgataatcactaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctcctaagcttacccaattggattcttcaa 34824879  T
Q  327 gttcttctc 335  Q
    |||||||||    
T  34824880 gttcttctc 34824888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 225 - 335
Target Start/End: Original strand, 23774438 - 23774549
Alignment:
Q  225 tgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctttcccaa-tggattctt 323  Q
    ||||| ||||||||||||  |||||||||||||||||||| ||||||||  ||||||    ||||||||||||||||||||||| ||||| |||||||||    
T  23774438 tgaacttgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctcctaagcttacccaattggattctt 23774537  T
Q  324 caagttcttctc 335  Q
    ||||||||||||    
T  23774538 caagttcttctc 23774549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 228 - 335
Target Start/End: Complemental strand, 3798554 - 3798446
Alignment:
Q  228 acatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctttcccaa-tggattcttcaa 326  Q
    |||||||||||||||  |||||||||||||||||||| ||||||||  ||||||    ||||||||||||||| ||||||| ||||| ||||||||||||    
T  3798554 acatgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctcataagcttacccaattggattcttcaa 3798455  T
Q  327 gttcttctc 335  Q
    |||||||||    
T  3798454 gttcttctc 3798446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 228 - 331
Target Start/End: Original strand, 8944151 - 8944255
Alignment:
Q  228 acatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctttcccaa-tggattcttcaa 326  Q
    |||||||||||||||  |||||||||||||||||||| ||||||||  ||||||    ||||||||||||||||||||||| ||||| ||||||||||||    
T  8944151 acatgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctcctaagcttacccaattggattcttcaa 8944250  T
Q  327 gttct 331  Q
    |||||    
T  8944251 gttct 8944255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 230 - 305
Target Start/End: Complemental strand, 9652828 - 9652753
Alignment:
Q  230 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaag 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||  || ||| |||| ||||||||||||||||||    
T  9652828 atgattatgataaagactaacccccttaccttagatgaagattaatcccaacttaggtttcaatttagctcctaag 9652753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 230 - 307
Target Start/End: Original strand, 22863235 - 22863312
Alignment:
Q  230 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagct 307  Q
    |||||||||||||||||||||||||||||||||||| |||||||  || ||| |||||| ||||||||||||||||||    
T  22863235 atgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggctgcaatttagctcctaagct 22863312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 44 - 164
Target Start/End: Complemental strand, 19886781 - 19886661
Alignment:
Q  44 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 143  Q
    ||||||| |||||||||| ||| |||  ||||| | |||||||||||| ||||||||| |||||| ||  ||||||||||||||||||||||| |||||     
T  19886781 gcacaatcttcataacttatcacttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcatacaaacataacatcac 19886682  T
Q  144 agttgtagcacgaatttagca 164  Q
    ||    |||||||||||||||    
T  19886681 agcaagagcacgaatttagca 19886661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 194 - 304
Target Start/End: Original strand, 33128335 - 33128446
Alignment:
Q  194 tttcatacaaatcatgaaaaattgcaatgaatgaac-atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaa 292  Q
    ||||||||||| || ||||||||||||  ||  ||  ||||||||||| |||||||||||||||||||||| | | |||||  |||||| |||||||||     
T  33128335 tttcatacaaaccaagaaaaattgcaaacaaacaattatgattatgatgaagactaacccccttaccttaggttatgattaatccaaacttaggcttcac 33128434  T
Q  293 tttagctcctaa 304  Q
    ||||||||||||    
T  33128435 tttagctcctaa 33128446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 230 - 307
Target Start/End: Complemental strand, 21273980 - 21273904
Alignment:
Q  230 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagct 307  Q
    |||||||||||||||||||||||| ||||||||||| |||||||  || ||| ||||||||| |||||||| ||||||    
T  21273980 atgattatgataaagactaacccc-ttaccttagataaagattaatcccaacttaggcttcactttagctcataagct 21273904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 230 - 307
Target Start/End: Complemental strand, 24341341 - 24341264
Alignment:
Q  230 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagct 307  Q
    ||||||||||| |||||||||||||||||||||||| | |||||  |  ||| ||||||||| |||||||||||||||    
T  24341341 atgattatgatgaagactaacccccttaccttagattatgattaacctcaacttaggcttcattttagctcctaagct 24341264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 231 - 307
Target Start/End: Original strand, 32466177 - 32466252
Alignment:
Q  231 tgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagct 307  Q
    |||||||||| |||||||||||| ||||||||||| | ||| |  |||||| |||||||||||||||||||||||||    
T  32466177 tgattatgatgaagactaacccc-ttaccttagataaggatcaacccaaacttaggcttcaatttagctcctaagct 32466252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 228 - 308
Target Start/End: Original strand, 16935898 - 16935978
Alignment:
Q  228 acatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctt 308  Q
    |||||||||||||||  |||||||||||||||||||| ||||||||  ||||||     |||||||| |||||||||||||    
T  16935898 acatgattatgataataactaacccccttaccttagaagaagattaacccaaactctttcttcaattcagctcctaagctt 16935978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 228 - 308
Target Start/End: Original strand, 17006558 - 17006638
Alignment:
Q  228 acatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctt 308  Q
    |||||||||||||||  |||||||||||||||||||| ||||||||  ||||||     |||||||| |||||||||||||    
T  17006558 acatgattatgataataactaacccccttaccttagaagaagattaacccaaactctttcttcaattcagctcctaagctt 17006638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 229 - 304
Target Start/End: Complemental strand, 28031167 - 28031092
Alignment:
Q  229 catgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaa 304  Q
    |||||||||||| |||||||||||||||||||||| | | |||||   ||||| ||||||||| |||| |||||||    
T  28031167 catgattatgatgaagactaacccccttaccttaggtaatgattaattcaaacttaggcttcactttaactcctaa 28031092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 228 - 273
Target Start/End: Complemental strand, 42177920 - 42177875
Alignment:
Q  228 acatgattatgataaagactaacccccttaccttagatgaagatta 273  Q
    |||||||||||||||  |||||||||||||||||||| ||||||||    
T  42177920 acatgattatgataataactaacccccttaccttagaagaagatta 42177875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 262
Target Start/End: Original strand, 22284278 - 22284310
Alignment:
Q  230 atgattatgataaagactaacccccttacctta 262  Q
    |||||||||||||||||||||||||||||||||    
T  22284278 atgattatgataaagactaacccccttacctta 22284310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 194 - 304
Target Start/End: Original strand, 17204622 - 17204733
Alignment:
Q  194 tttcatacaaatcatgaaaaattgcaatgaatgaac-atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaa 292  Q
    ||||||||||| || ||||||||||||  ||  ||  ||||||||||| ||||||||||||||||| |||| | | |||||  |||||| ||| |||||     
T  17204622 tttcatacaaaccaagaaaaattgcaaacaaacaattatgattatgatgaagactaacccccttactttaggttatgattaatccaaacttagacttcac 17204721  T
Q  293 tttagctcctaa 304  Q
    |||| |||||||    
T  17204722 tttaactcctaa 17204733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 230 - 261
Target Start/End: Original strand, 25213372 - 25213403
Alignment:
Q  230 atgattatgataaagactaacccccttacctt 261  Q
    ||||||||||||||||||||||||||||||||    
T  25213372 atgattatgataaagactaacccccttacctt 25213403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 304
Target Start/End: Original strand, 21142203 - 21142276
Alignment:
Q  231 tgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaa 304  Q
    |||||||||| || || |||||||||||||||||||| | |||  |  ||| ||||||||| ||||||||||||    
T  21142203 tgattatgatgaaaacaaacccccttaccttagatgatgtttaatcttaacttaggcttcactttagctcctaa 21142276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 261
Target Start/End: Complemental strand, 11231321 - 11231256
Alignment:
Q  194 tttcatacaaatcatgaaaaattgcaatgaatgaacatgattatgataaagactaacccccttacctt 261  Q
    ||||||||||  ||||| ||| ||||| || || |||||||||||||||  |||||||||||||||||    
T  11231321 tttcatacaa--catgagaaaatgcaaagattgtacatgattatgataataactaacccccttacctt 11231256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 230 - 262
Target Start/End: Complemental strand, 19794661 - 19794629
Alignment:
Q  230 atgattatgataaagactaacccccttacctta 262  Q
    ||||||||||| |||||||||||||||||||||    
T  19794661 atgattatgatgaagactaacccccttacctta 19794629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 230 - 262
Target Start/End: Complemental strand, 20627270 - 20627238
Alignment:
Q  230 atgattatgataaagactaacccccttacctta 262  Q
    |||||||||||||||||||||||| ||||||||    
T  20627270 atgattatgataaagactaaccccgttacctta 20627238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 230 - 262
Target Start/End: Original strand, 22275045 - 22275077
Alignment:
Q  230 atgattatgataaagactaacccccttacctta 262  Q
    ||||||||||||||| |||||||||||||||||    
T  22275045 atgattatgataaaggctaacccccttacctta 22275077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 261
Target Start/End: Complemental strand, 22513168 - 22513103
Alignment:
Q  194 tttcatacaaatcatgaaaaattgcaatgaatgaacatgattatgataaagactaacccccttacctt 261  Q
    ||||||||||  ||||| ||| ||||| || || |||||||||||||||  |||||||||||||||||    
T  22513168 tttcatacaa--catgagaaaatgcaaagattgtacatgattatgataataactaacccccttacctt 22513103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 261
Target Start/End: Complemental strand, 24685764 - 24685699
Alignment:
Q  194 tttcatacaaatcatgaaaaattgcaatgaatgaacatgattatgataaagactaacccccttacctt 261  Q
    ||||||||||  ||||| ||| ||||| || || |||||||||||||||  |||||||||||||||||    
T  24685764 tttcatacaa--catgagaaaatgcaaagattgtacatgattatgataataactaacccccttacctt 24685699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 261
Target Start/End: Complemental strand, 28775790 - 28775725
Alignment:
Q  194 tttcatacaaatcatgaaaaattgcaatgaatgaacatgattatgataaagactaacccccttacctt 261  Q
    ||||||||||  ||||| ||| ||||| || || |||||||||||||||  |||||||||||||||||    
T  28775790 tttcatacaa--catgagaaaatgcaaagattgtacatgattatgataataactaacccccttacctt 28775725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 299; Significance: 1e-168; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 13 - 335
Target Start/End: Complemental strand, 1745 - 1423
Alignment:
Q  13 tcaagaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattat 112  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  1745 tcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattat 1646  T
Q  113 tatcaattcatgcatacaaacatatcatcaaagttgtagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaa 212  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  1645 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccattcattcatttcaacccatttcatccaaatcatgaaa 1546  T
Q  213 aattgcaatgaatgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctttccc 312  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1545 aattgcaaagaatgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctttccc 1446  T
Q  313 aatggattcttcaagttcttctc 335  Q
    || ||||||||||||||||||||    
T  1445 aaaggattcttcaagttcttctc 1423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 292; Significance: 1e-164; HSPs: 2)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 292; E-Value: 1e-164
Query Start/End: Original strand, 13 - 335
Target Start/End: Original strand, 22640 - 22963
Alignment:
Q  13 tcaagaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattat 112  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  22640 tcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattat 22739  T
Q  113 tatcaattcatgcatacaaacatatcatcaaagttgtagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaa 212  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  22740 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattattcattcattcatttcaacccatttcatccaaatcatgaaa 22839  T
Q  213 aattgcaatgaatgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctttccc 312  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22840 aattgcaaagaatgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctttccc 22939  T
Q  313 aa-tggattcttcaagttcttctc 335  Q
    || |||||||||||||||||||||    
T  22940 aattggattcttcaagttcttctc 22963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 292; E-Value: 1e-164
Query Start/End: Original strand, 13 - 335
Target Start/End: Original strand, 26895 - 27218
Alignment:
Q  13 tcaagaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattat 112  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  26895 tcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattat 26994  T
Q  113 tatcaattcatgcatacaaacatatcatcaaagttgtagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaa 212  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  26995 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccattcattcatttcaacccatttcatccaaatcatgaaa 27094  T
Q  213 aattgcaatgaatgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctttccc 312  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27095 aattgcaaagaaggaacatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctttccc 27194  T
Q  313 aa-tggattcttcaagttcttctc 335  Q
    || |||||||||||||||||||||    
T  27195 aattggattcttcaagttcttctc 27218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 290; Significance: 1e-163; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 290; E-Value: 1e-163
Query Start/End: Original strand, 19 - 335
Target Start/End: Complemental strand, 37223 - 36906
Alignment:
Q  19 acaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaa 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  37223 acaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattattatcaa 37124  T
Q  119 ttcatgcatacaaacatatcatcaaagttgtagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaaattgc 218  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  37123 ttcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaaattgt 37024  T
Q  219 aatgaatgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctttcccaa-tgg 317  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||    
T  37023 aaggaatgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagcttacccaattgg 36924  T
Q  318 attcttcaagttcttctc 335  Q
    ||||||||||||||||||    
T  36923 attcttcaagttcttctc 36906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 288; Significance: 1e-161; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 288; E-Value: 1e-161
Query Start/End: Original strand, 13 - 335
Target Start/End: Complemental strand, 16328089 - 16327766
Alignment:
Q  13 tcaagaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattat 112  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  16328089 tcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattat 16327990  T
Q  113 tatcaattcatgcatacaaacatatcatcaaagttgtagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaa 212  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  16327989 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccattcattcatttcaacccatttcatccaaatcatgaaa 16327890  T
Q  213 aattgcaatgaatgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctttccc 312  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  16327889 aattgcaaagaatgaacatgattatgataaagactaacccccttaccttatatgaagattaggccaaacctaggcttcaatttagctcctaagctttccc 16327790  T
Q  313 aa-tggattcttcaagttcttctc 335  Q
    || |||||||||||||||||||||    
T  16327789 aattggattcttcaagttcttctc 16327766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 19 - 335
Target Start/End: Original strand, 26680306 - 26680623
Alignment:
Q  19 acaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaa 118  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  26680306 acaacatgtcaaattcatctattttgcacaattttcataacttttcatttttacatatttaaacatgtaatttaaccaacaatcatacaattattatcaa 26680405  T
Q  119 ttcatgcatacaaacatatcatcaaagttgtagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaaattgc 218  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  26680406 ttcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccattcattcatttcaacccattccatacaaatcatgaaaaattgc 26680505  T
Q  219 aatgaatgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctttcccaa-tgg 317  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||    
T  26680506 aaagaatgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagcttacccaattgg 26680605  T
Q  318 attcttcaagttcttctc 335  Q
    ||||||||||||||||||    
T  26680606 attcttcaagttcttctc 26680623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 280; E-Value: 1e-157
Query Start/End: Original strand, 13 - 335
Target Start/End: Original strand, 10488662 - 10488985
Alignment:
Q  13 tcaagaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattat 112  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  10488662 tcaacaacaacatgtcaaattcatccattttgcacaattttcataacttttcattttcacatattcaaacatgtaatttaaccaacaatcatacaattat 10488761  T
Q  113 tatcaattcatgcatacaaacatatcatcaaagttgtagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaa 212  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  10488762 tatcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagcaacaattatccattcattcatttcaactcatttcatccaaatcatgaaa 10488861  T
Q  213 aattgcaatgaatgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctttccc 312  Q
    |||||||| ||||||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10488862 aattgcaaagaatgaacatgattaagataaagaccaaccaccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctttccc 10488961  T
Q  313 aa-tggattcttcaagttcttctc 335  Q
    || |||||||||||||||||||||    
T  10488962 aattggattcttcaagttcttctc 10488985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 29 - 332
Target Start/End: Complemental strand, 13048368 - 13048064
Alignment:
Q  29 aaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcata 128  Q
    ||||||||| |||  ||||||| |||||||||| || |||| ||||||||||||||||||||| ||||||||||||||||| || ||||| |||||||||    
T  13048368 aaattcatcaattgagcacaatattcataacttatcctttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaaatcatgcata 13048269  T
Q  129 caaacatatcatcaaagttgtagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaaattgcaatgaatgaa 228  Q
    ||||||||||||  |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  13048268 caaacatatcattgaagttggagcatgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaaattgcaaagaatgaa 13048169  T
Q  229 catgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctttcccaa-tggattcttcaag 327  Q
    ||||||  ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||    
T  13048168 catgatggtgataaagactaacccccttaacttagatgaagattagaccaaacctaggcttcaatttaactcctaagcttacccaattggattcttcaag 13048069  T
Q  328 ttctt 332  Q
    |||||    
T  13048068 ttctt 13048064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 201 - 335
Target Start/End: Complemental strand, 16609074 - 16608939
Alignment:
Q  201 caaatcatgaaaaattgcaatgaatgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctc 300  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16609074 caaatcatgaaaaattgcaaagaatgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctc 16608975  T
Q  301 ctaagctttcccaa-tggattcttcaagttcttctc 335  Q
    |||||||||||||| |||||||||||||||||||||    
T  16608974 ctaagctttcccaattggattcttcaagttcttctc 16608939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 44 - 307
Target Start/End: Original strand, 13246561 - 13246814
Alignment:
Q  44 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 143  Q
    |||||||||||| ||||| ||||||   | ||||| |||||||||||| |||||||||||||||||||| || ||||||||||||||||||||||||||     
T  13246561 gcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcattaattcatgcatacaaacatatcatcac 13246660  T
Q  144 agttgtagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaaattgcaatgaatgaacatgattatgataaa 243  Q
    |||||||||||||||||| ||||||||||||||| || ||    ||   | |||||||||    |||||| || |||  |||||  ||||||||||||||    
T  13246661 agttgtagcacgaatttaacaacaattatccatt-atgca----aa---aattcatacaacatttgaaaatttacaa--aatgatgatgattatgataaa 13246750  T
Q  244 gactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagct 307  Q
    |||||||||||||||||||||| |||||||  || ||| |||||||||||||||||||||||||    
T  13246751 gactaacccccttaccttagataaagattaatcccaacttaggcttcaatttagctcctaagct 13246814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 44 - 307
Target Start/End: Original strand, 122020 - 122271
Alignment:
Q  44 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 143  Q
    |||||||||||| ||||| ||||||| |||||||| |||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||||||||     
T  122020 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcac 122119  T
Q  144 agttgtagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaaattgcaatgaatgaacatgattatgataaa 243  Q
    ||||| ||||| ||||||||||||||||||||          | | |  | |||||||||    |||||| || |||  |||||  ||||||||||||||    
T  122120 agttggagcacaaatttagcaacaattatcca----------taagcaaaattcatacaacatttgaaaatttacaa--aatgatgatgattatgataaa 122207  T
Q  244 gactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagct 307  Q
    |||||| ||||||||||||||| |||||||  || ||| ||| |||||||||||||| ||||||    
T  122208 gactaatccccttaccttagataaagattaatcccaacttagacttcaatttagctcttaagct 122271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 44 - 175
Target Start/End: Complemental strand, 15675221 - 15675090
Alignment:
Q  44 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 143  Q
    |||||||||||| |||||  |||||| ||||| || |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||     
T  15675221 gcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcac 15675122  T
Q  144 agttgtagcacgaatttagcaacaattatcca 175  Q
    ||||| ||||||||||||||||||||||||||    
T  15675121 agttggagcacgaatttagcaacaattatcca 15675090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 44 - 175
Target Start/End: Complemental strand, 10104382 - 10104251
Alignment:
Q  44 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 143  Q
    |||||||||||| |||||  |||||| ||||| || |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||     
T  10104382 gcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcac 10104283  T
Q  144 agttgtagcacgaatttagcaacaattatcca 175  Q
    ||||| |||||| |||||||||||||||||||    
T  10104282 agttggagcacggatttagcaacaattatcca 10104251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 44 - 177
Target Start/End: Complemental strand, 54118376 - 54118243
Alignment:
Q  44 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 143  Q
    |||||||||||| ||||| ||| ||   | ||||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||     
T  54118376 gcacaattttcacaacttatcaattgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcac 54118277  T
Q  144 agttgtagcacgaatttagcaacaattatccatt 177  Q
    | ||| ||||||||||||||||||||||||||||    
T  54118276 aattggagcacgaatttagcaacaattatccatt 54118243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 29 - 142
Target Start/End: Original strand, 10644336 - 10644449
Alignment:
Q  29 aaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcata 128  Q
    ||||||| | |||| |||||||  |||||||||  |||||| |||||||| |||||||||||| || ||||||||||||||||| |||||||||||||||    
T  10644336 aaattcaccaatttagcacaatactcataacttaacatttttacatatttgaacatgtaatttcactaacaatcatacaattatcatcaattcatgcata 10644435  T
Q  129 caaacatatcatca 142  Q
    |||||||| |||||    
T  10644436 caaacataacatca 10644449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 228 - 335
Target Start/End: Original strand, 20001028 - 20001136
Alignment:
Q  228 acatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctttcccaa-tggattcttcaa 326  Q
    |||||||||||||||  |||||||||||||||||||| ||||||||  ||||||    ||||||||||||||||||||||| ||||| ||||||||||||    
T  20001028 acatgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctcctaagcttacccaattggattcttcaa 20001127  T
Q  327 gttcttctc 335  Q
    |||||||||    
T  20001128 gttcttctc 20001136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 48 - 148
Target Start/End: Original strand, 31115764 - 31115864
Alignment:
Q  48 aattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagtt 147  Q
    |||||||| |||||  |||||| ||||| |  |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  31115764 aattttcacaacttcacatttttacataatggaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagtt 31115863  T
Q  148 g 148  Q
    |    
T  31115864 g 31115864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 231 - 335
Target Start/End: Original strand, 26339327 - 26339432
Alignment:
Q  231 tgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctttcccaa-tggattcttcaagtt 329  Q
    ||||||||||||  |||||||||||||||||||| ||||||||  ||||||    ||||||||||||||||||||||| ||||| |||||||||||||||    
T  26339327 tgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctcctaagcttacccaattggattcttcaagtt 26339426  T
Q  330 cttctc 335  Q
    ||||||    
T  26339427 cttctc 26339432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 103 - 175
Target Start/End: Original strand, 33240890 - 33240962
Alignment:
Q  103 atacaattattatcaattcatgcatacaaacatatcatcaaagttgtagcacgaatttagcaacaattatcca 175  Q
    ||||||| || ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  33240890 atacaatcatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatcca 33240962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 230 - 307
Target Start/End: Complemental strand, 15135939 - 15135862
Alignment:
Q  230 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagct 307  Q
    |||||||||||||||||||||||||||||||||||| |||||||  || ||| ||||||||| |||||||||||||||    
T  15135939 atgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctcctaagct 15135862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 230 - 307
Target Start/End: Complemental strand, 15272243 - 15272166
Alignment:
Q  230 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagct 307  Q
    |||||||||||||||||||||||||||||||||||| |||||||  || ||| ||||||||| |||||||||||||||    
T  15272243 atgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctcctaagct 15272166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 29 - 164
Target Start/End: Original strand, 47357771 - 47357906
Alignment:
Q  29 aaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcata 128  Q
    ||||||| | |||| ||||||| |||||||||| |||||||  ||||| | |||||||||||| ||||||||| |||||| ||  |||||| ||||||||    
T  47357771 aaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaatccatgcata 47357870  T
Q  129 caaacatatcatcaaagttgtagcacgaatttagca 164  Q
    |||||||| ||||| ||    |||||||||||||||    
T  47357871 caaacataacatcacagcaagagcacgaatttagca 47357906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 231 - 307
Target Start/End: Complemental strand, 55376525 - 55376449
Alignment:
Q  231 tgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagct 307  Q
    |||||||||| |||||||||||||||||||||||| | ||| |  |||||| |||||||||||||||||||||||||    
T  55376525 tgattatgatgaagactaacccccttaccttagataaggatcaacccaaacttaggcttcaatttagctcctaagct 55376449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 51 - 303
Target Start/End: Complemental strand, 40885680 - 40885418
Alignment:
Q  51 tttcataacttttcattttcacata-tttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttgt 149  Q
    |||||||||||  |||||  ||||| ||| |||||||||||| |||||||| ||| ||||||| | ||||||||||||||||||||| || || |||||     
T  40885680 tttcataacttgacatttatacatactttgaacatgtaatttcaccaacaaacattcaattatcaccaattcatgcatacaaacatagcaccacagttgg 40885581  T
Q  150 agcacgaa-tttagc-------aacaattatccattcattcatttcaacccat-ttcatacaaatcatgaaaaattgcaatgaatgaacatgattatgat 240  Q
    || ||||| ||||||       |||||||||||| | ||||| || | | | | |||||||||   ||  |||||| |  | ||| | ||||||||||||    
T  40885580 agtacgaattttagcaaacatgaacaattatccaattattcaattaatcacttattcatacaagaaatagaaaattactctaaataatcatgattatgat 40885481  T
Q  241 aaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctccta 303  Q
     ||  |||||||||||||||||||| | |||||  |||||| ||||||||| |||||||||||    
T  40885480 gaattctaacccccttaccttagataatgattaatccaaacttaggcttcactttagctccta 40885418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 230 - 305
Target Start/End: Original strand, 14952085 - 14952160
Alignment:
Q  230 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaag 305  Q
    ||||||||||||||||||||||||||||||||||| ||||||||  ||||||    ||||||||| ||||||||||    
T  14952085 atgattatgataaagactaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctcctaag 14952160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 229 - 304
Target Start/End: Complemental strand, 32460636 - 32460561
Alignment:
Q  229 catgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaa 304  Q
    |||||||||||  |||||||||||||||||||||||| | |||||  |||||| ||||||||| ||||||||||||    
T  32460636 catgattatgaagaagactaacccccttaccttagataatgattaatccaaacttaggcttcactttagctcctaa 32460561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 230 - 307
Target Start/End: Complemental strand, 15675041 - 15674964
Alignment:
Q  230 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagct 307  Q
    ||||||||||| |||||||||||||||||||||||| | |||||  |  ||| ||||||||| |||||||||||||||    
T  15675041 atgattatgatgaagactaacccccttaccttagattatgattaacctcaacttaggcttcactttagctcctaagct 15674964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 150 - 263
Target Start/End: Original strand, 9795454 - 9795566
Alignment:
Q  150 agcacgaattt-agcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaaattgcaatgaatgaacatgattatgataaagacta 248  Q
    ||||||||||| | ||||||||||| ||||||||   ||||||||||||||||||  ||||| ||| || ||  | |||||||||||||||| |  ||||    
T  9795454 agcacgaattttaacaacaattatcaattcattccaatcaacccatttcatacaa--catgagaaaatgaaaaaattgaacatgattatgatgataacta 9795551  T
Q  249 acccccttaccttag 263  Q
    |||||||||||||||    
T  9795552 acccccttaccttag 9795566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 230 - 307
Target Start/End: Complemental strand, 10104202 - 10104125
Alignment:
Q  230 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagct 307  Q
    ||||||||||| |||||||||||||||||||||||| | |||||  |  ||| ||||||| | |||||||||||||||    
T  10104202 atgattatgatgaagactaacccccttaccttagattatgattaacctcaacttaggctttactttagctcctaagct 10104125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 228 - 305
Target Start/End: Complemental strand, 15287196 - 15287119
Alignment:
Q  228 acatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaag 305  Q
    |||||||||||||||  |||||||||||||||||||| ||||||||  ||||||    ||||||||| ||||||||||    
T  15287196 acatgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctcctaag 15287119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 228 - 305
Target Start/End: Complemental strand, 15294305 - 15294228
Alignment:
Q  228 acatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaag 305  Q
    |||||||||||||||  |||||||||||||||||||| ||||||||  ||||||    ||||||||| ||||||||||    
T  15294305 acatgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctcctaag 15294228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 228 - 304
Target Start/End: Complemental strand, 7132016 - 7131940
Alignment:
Q  228 acatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaa 304  Q
    |||||||||||||||  |||||||||||||||||||| ||||||||  ||||||    ||||||||| |||||||||    
T  7132016 acatgattatgataataactaacccccttaccttagaagaagattaatccaaactcttgcttcaattcagctcctaa 7131940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 225 - 273
Target Start/End: Complemental strand, 17145611 - 17145563
Alignment:
Q  225 tgaacatgattatgataaagactaacccccttaccttagatgaagatta 273  Q
    ||||||||||||||||||  |||||||||||||||||||| ||||||||    
T  17145611 tgaacatgattatgataataactaacccccttaccttagaagaagatta 17145563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 194 - 304
Target Start/End: Original strand, 8045235 - 8045346
Alignment:
Q  194 tttcatacaaatcatgaaaaattgcaatgaatgaac-atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaa 292  Q
    ||||||||||| || ||||||||||||  ||  ||  ||||||||||| |||||||||||||||||||||| | | |||||   ||||| ||| |||||     
T  8045235 tttcatacaaaccaagaaaaattgcaaacaaacaattatgattatgatgaagactaacccccttaccttaggttatgattaattcaaacttagacttcac 8045334  T
Q  293 tttagctcctaa 304  Q
    ||||||||||||    
T  8045335 tttagctcctaa 8045346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 230 - 300
Target Start/End: Complemental strand, 14500144 - 14500074
Alignment:
Q  230 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctc 300  Q
    ||||||||||| ||| |||||||||||||||||||| | |||||  |||||| || |||||| ||||||||    
T  14500144 atgattatgatgaagcctaacccccttaccttagataatgattaatccaaacttaagcttcactttagctc 14500074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 304
Target Start/End: Original strand, 14996365 - 14996519
Alignment:
Q  150 agcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaaattgcaatgaatgaa--catgattatgataaagact 247  Q
    |||| ||||||| ||||||||||| ||||||||   |||| |||||||||||||  || | ||||||||||  ||   |  ||||||||||||||  |||    
T  14996365 agcaggaatttaacaacaattatcaattcattccaatcaatccatttcatacaa--caaggaaaattgcaaacaaaacaatcatgattatgataataact 14996462  T
Q  248 aacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaa 304  Q
    ||||||||||||||| | ||||||||  ||||||    ||||||||| |||||||||    
T  14996463 aacccccttaccttaaaagaagattaacccaaactcttgcttcaattcagctcctaa 14996519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 304
Target Start/End: Complemental strand, 19697390 - 19697236
Alignment:
Q  150 agcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaaattgcaa--tgaatgaacatgattatgataaagact 247  Q
    |||||||||||| ||||||||||| ||||||||   ||||||||||||||||||  || | ||||||||||    ||  | |||||||||||  || |||    
T  19697390 agcacgaatttaacaacaattatcaattcattccaatcaacccatttcatacaa--caaggaaaattgcaaacaaaacaatcatgattatgaagaacact 19697293  T
Q  248 aacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaa 304  Q
    |||||||||||||||| | | |||||   || || ||||||||| |||| |||||||    
T  19697292 aacccccttaccttaggttatgattaattcacacttaggcttcactttacctcctaa 19697236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 304
Target Start/End: Complemental strand, 19707975 - 19707821
Alignment:
Q  150 agcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaaattgcaa--tgaatgaacatgattatgataaagact 247  Q
    |||||||||||| ||||||||||| ||||||||   ||||||||||||||||||  || | ||||||||||    ||  | |||||||||||  || |||    
T  19707975 agcacgaatttaacaacaattatcaattcattccaatcaacccatttcatacaa--caaggaaaattgcaaacaaaacaatcatgattatgaagaacact 19707878  T
Q  248 aacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaa 304  Q
    |||||||||||||||| | | |||||   || || ||||||||| |||| |||||||    
T  19707877 aacccccttaccttaggttatgattaattcacacttaggcttcactttacctcctaa 19707821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 231 - 305
Target Start/End: Complemental strand, 22352012 - 22351938
Alignment:
Q  231 tgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaag 305  Q
    ||||||||||||  |||||||||||||||||||| ||||||||  ||||||    ||||||||| ||||||||||    
T  22352012 tgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctcctaag 22351938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 233 - 307
Target Start/End: Original strand, 31132628 - 31132702
Alignment:
Q  233 attatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagct 307  Q
    |||||||| |||||||||||||||||||||||| | |||||  |  ||| |||||| || |||||||||||||||    
T  31132628 attatgatgaagactaacccccttaccttagattatgattaacctcaacttaggctccactttagctcctaagct 31132702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 177
Target Start/End: Original strand, 7850131 - 7850264
Alignment:
Q  44 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 143  Q
    ||||||||||||||||||  |||||||||||| ||  ||||  ||||  ||||||||||| ||| || | |||||| ||| ||| |||||||| ||||      
T  7850131 gcacaattttcataacttcacattttcacataattggacatacaattccaccaacaatcacacagttttcatcaatacattcattcaaacataacatctc 7850230  T
Q  144 agttgtagcacgaatttagcaacaattatccatt 177  Q
      ||| |||||||||||| || ||||||| ||||    
T  7850231 cattggagcacgaatttaacagcaattatgcatt 7850264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 224 - 265
Target Start/End: Original strand, 7850308 - 7850349
Alignment:
Q  224 atgaacatgattatgataaagactaacccccttaccttagat 265  Q
    ||||||||||||||| | ||||||||||||||||||||||||    
T  7850308 atgaacatgattatggtgaagactaacccccttaccttagat 7850349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 231 - 304
Target Start/End: Original strand, 22738577 - 22738650
Alignment:
Q  231 tgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaa 304  Q
    |||||||||| ||||| |||||||||||||||||||| | |||  |  ||| ||||||||| ||||||||||||    
T  22738577 tgattatgatgaagacaaacccccttaccttagatgatgtttaatcttaacttaggcttcactttagctcctaa 22738650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 230 - 307
Target Start/End: Original strand, 33241011 - 33241088
Alignment:
Q  230 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagct 307  Q
    ||||||||||| |||||||||||||||||||||||| | |||||  |  ||| ||||||||  |||| ||||||||||    
T  33241011 atgattatgatgaagactaacccccttaccttagattatgattaacctcaacttaggcttcgctttaactcctaagct 33241088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 308
Target Start/End: Original strand, 47357956 - 47358035
Alignment:
Q  228 acatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctt 308  Q
    |||||||| ||||||  |||||||||||||||||||| |||||||| ||| |||    ||||||||| |||||||||||||    
T  47357956 acatgattgtgataataactaacccccttaccttagaagaagatta-acccaactcttgcttcaattcagctcctaagctt 47358035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 263
Target Start/End: Original strand, 16523109 - 16523179
Alignment:
Q  194 tttcatacaaatcatgaaaaattgcaatgaatgaac-atgattatgataaagactaacccccttaccttag 263  Q
    ||||||||||| || ||||||||||||  ||  ||  ||||||||||| ||||||||||||||||||||||    
T  16523109 tttcatacaaaccaagaaaaattgcaaacaaacaattatgattatgatgaagactaacccccttaccttag 16523179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 273
Target Start/End: Original strand, 18248527 - 18248568
Alignment:
Q  232 gattatgataaagactaacccccttaccttagatgaagatta 273  Q
    |||||||||||  ||||||||||||||||||||||| |||||    
T  18248527 gattatgataataactaacccccttaccttagatgatgatta 18248568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 230 - 262
Target Start/End: Complemental strand, 54118200 - 54118168
Alignment:
Q  230 atgattatgataaagactaacccccttacctta 262  Q
    ||||||||||| |||||||||||||||||||||    
T  54118200 atgattatgatgaagactaacccccttacctta 54118168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0772 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: scaffold0772
Description:

Target: scaffold0772; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 44 - 335
Target Start/End: Original strand, 5660 - 5951
Alignment:
Q  44 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 143  Q
    ||||||| ||||| |||| ||||||| ||||||||||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||| ||||||    
T  5660 gcacaatattcatgacttatcatttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacataacatcaa 5759  T
Q  144 agttgtagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaaattgcaatgaatgaacatgattatgataaa 243  Q
    ||||| ||||||||||||||||||||||| ||||||||| |||||| ||||||||||||||||||||||||||| || ||||||||||||||||| ||||    
T  5760 agttggagcacgaatttagcaacaattattcattcattcgtttcaatccatttcatacaaatcatgaaaaattgtaaagaatgaacatgattatggtaaa 5859  T
Q  244 gactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctttcccaatggattcttcaagttcttctc 335  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| |||||||||||||    
T  5860 gactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagcttacccaattgattcctcaagttcttctc 5951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 145; Significance: 3e-76; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 29 - 296
Target Start/End: Original strand, 13622 - 13890
Alignment:
Q  29 aaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcata 128  Q
    ||||||||| |||  |||||||||||| |||||  |||||| ||||| || |||||||||||| |||||||||||||||||||| |||||||||||||||    
T  13622 aaattcatcaattgagcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcata 13721  T
Q  129 caaacatatcatcaaagttgtagcacgaatttagcaacaattatccattcattcatttcaacccat-ttcatacaaatcatgaaaaattgcaatgaatga 227  Q
    |||||||| ||||||||||  |||||||||||||||||||||||||||| ||||| |||||||||| |||||||||   |||| |||||||||| ||| |    
T  13722 caaacataacatcaaagttagagcacgaatttagcaacaattatccatttattcaattcaacccatattcatacaacaaatgagaaattgcaataaataa 13821  T
Q  228 acatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaattta 296  Q
    ||||||||||||| |||||||||||||||||||||||| | |||||  |||||| ||||||||| ||||    
T  13822 acatgattatgatgaagactaacccccttaccttagataatgattaatccaaacttaggcttcacttta 13890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 138; Significance: 4e-72; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 44 - 308
Target Start/End: Complemental strand, 1657880 - 1657615
Alignment:
Q  44 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 143  Q
    ||||||||||||||||||  |||||| ||||| || ||||||| |||| |||||||||||||||||||| |||||||||||||| |||||||| |||||     
T  1657880 gcacaattttcataacttcacatttttacataattgaacatgtgatttcaccaacaatcatacaattatcatcaattcatgcatccaaacataacatcac 1657781  T
Q  144 agttgtagcacgaatttagcaacaattatccattcattcatttcaacccat-ttcatacaaatcatgaaaaattgcaatgaatgaacatgattatgataa 242  Q
    ||||  |||||||||||||||||||||||||||| ||||| |||||||||| |||||||||   |||| |||||||||| |||||||||||||||||| |    
T  1657780 agttagagcacgaatttagcaacaattatccatttattcaattcaacccatattcatacaacaaatgagaaattgcaataaatgaacatgattatgatga 1657681  T
Q  243 agactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctt 308  Q
    |||||||||||||||||||||| ||||||||  ||||||    | ||||||| |||||||||||||    
T  1657680 agactaacccccttaccttagaagaagattaacccaaactcttgtttcaattcagctcctaagctt 1657615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 44 - 308
Target Start/End: Original strand, 15862602 - 15862867
Alignment:
Q  44 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 143  Q
    ||||||||||||||||||  |||||  ||||| || ||||||| |||| |||||||||||||||||||| ||||||||||||||||||||||| |||||     
T  15862602 gcacaattttcataacttcacatttatacataattgaacatgtgatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcac 15862701  T
Q  144 agttgtagcacgaatttagcaacaattatccattcattcatttcaacccat-ttcatacaaatcatgaaaaattgcaatgaatgaacatgattatgataa 242  Q
    ||||  ||||||||||||| |||||||||||||| ||||| |||||||||| |||||||||   |||| |||||||||| |||||||||||||||||| |    
T  15862702 agttagagcacgaatttagtaacaattatccatttattcaattcaacccatattcatacaacaaatgagaaattgcaataaatgaacatgattatgatga 15862801  T
Q  243 agactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctt 308  Q
    |||||||||||||||||||||| ||||||||  ||||||    ||||||||| | |||||||||||    
T  15862802 agactaacccccttaccttagaagaagattaacccaaactcttgcttcaattcacctcctaagctt 15862867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 44 - 300
Target Start/End: Complemental strand, 35009571 - 35009314
Alignment:
Q  44 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 143  Q
    |||||||||||| |||||  |||||| ||||| || |||||||||||| |||||||||||||||||||| |||||||||||||||||||| || |||||     
T  35009571 gcacaattttcaaaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacttaacatcac 35009472  T
Q  144 agttgtagcacgaatttagcaacaattatccattcattcatttcaacccat-ttcatacaaatcatgaaaaattgcaatgaatgaacatgattatgataa 242  Q
    ||||  ||||||||||||||||||||||||||||  |||| |||||||||| |||||||||   |||| |||||||||| |||||||||||||||||| |    
T  35009471 agttagagcacgaatttagcaacaattatccatttcttcaattcaacccatattcatacaacaaatgagaaattgcaataaatgaacatgattatgatga 35009372  T
Q  243 agactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctc 300  Q
    |||||||||||||||| |||||| | |||||  |||||| | ||||||| ||||||||    
T  35009371 agactaacccccttactttagataatgattaatccaaactttggcttcactttagctc 35009314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 44 - 335
Target Start/End: Complemental strand, 1650225 - 1649947
Alignment:
Q  44 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 143  Q
    |||||||||||| ||||| ||||| | |||||||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||| || |||||     
T  1650225 gcacaattttcacaacttatcattcttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacgtaacatcac 1650126  T
Q  144 agttgtagcacgaatttagcaacaattatccattcattcatttcaacccattt-catacaaatcatgaaaaattgcaatgaatgaacatgattatgataa 242  Q
    |||   ||||||||| |||||  |||| | |||          |||||||||| |||||||  ||||| ||| |||||  ||| | ||||||||||||||    
T  1650125 agtaagagcacgaatctagcatgaattgttcat----------caacccattttcatacaa--catgagaaaatgcaa--aatta-catgattatgataa 1650041  T
Q  243 agactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctttcccaa-tggattcttcaagttcttctc 335  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  1650040 agactaacccccttaccttaaatgaagattagaccaaacctaggcttcaatttagctcctaagctttcccaattggattcttcaagttcttctc 1649947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 93 - 307
Target Start/End: Original strand, 27751605 - 27751819
Alignment:
Q  93 accaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttgtagcacgaatttagcaacaattatccattcattcatttcaaccc 192  Q
    |||||||||||||||||| | ||||||||||||||||||||||| ||||| | ||  |||||||||||||| ||| ||||||||| ||||| ||||||||    
T  27751605 accaacaatcatacaattgtcatcaattcatgcatacaaacataacatcacaattagagcacgaatttagctacatttatccatttattcaattcaaccc 27751704  T
Q  193 at-ttcatacaaatcatgaaaaattgcaatgaatgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttca 291  Q
    || |||||||| |  |||| |||||||||| |||||||||||||||||| |||||||||||||||||||||||| |||||||  |||||| |||||||||    
T  27751705 atattcatacacaa-atgagaaattgcaataaatgaacatgattatgatgaagactaacccccttaccttagataaagattaatccaaacttaggcttca 27751803  T
Q  292 atttagctcctaagct 307  Q
    ||||||||||||||||    
T  27751804 atttagctcctaagct 27751819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 44 - 307
Target Start/End: Original strand, 23153578 - 23153831
Alignment:
Q  44 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 143  Q
    |||||||||||| ||||| ||||||   | ||||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||     
T  23153578 gcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcac 23153677  T
Q  144 agttgtagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaaattgcaatgaatgaacatgattatgataaa 243  Q
    ||||| ||||||||||||| |||||||||||||| || ||    ||   | |||||||||    |||||| || |||  |||||  ||||||||||| ||    
T  23153678 agttggagcacgaatttagaaacaattatccatt-atgca----aa---aattcatacaacatttgaaaatttacaa--aatgatgatgattatgatgaa 23153767  T
Q  244 gactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagct 307  Q
    |||||||||||||||||||| | |||||||  || ||| |||||||||||||||||||||||||    
T  23153768 gactaacccccttaccttaggtaaagattaatcccaacttaggcttcaatttagctcctaagct 23153831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 45 - 176
Target Start/End: Complemental strand, 14626249 - 14626118
Alignment:
Q  45 cacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaa 144  Q
    ||||||||||||||||| ||||||| |||||||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||| |    
T  14626249 cacaattttcataacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcaca 14626150  T
Q  145 gttgtagcacgaatttagcaacaattatccat 176  Q
    |    |||||||||||||||| ||||||||||    
T  14626149 gcaagagcacgaatttagcaataattatccat 14626118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 79 - 307
Target Start/End: Original strand, 29666040 - 29666258
Alignment:
Q  79 aaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttgtagcacgaatttagcaacaattatccattc 178  Q
    ||||||||||||| ||| |||||||||||||||| |||||||||| ||||  || ||| ||||| || |  |||||||||||| ||||||||||||||      
T  29666040 aaacatgtaatttcacccacaatcatacaattatcatcaattcatacataagaaaataacatcacagctagagcacgaatttaacaacaattatccat-- 29666137  T
Q  179 attcatttcaacccattt-catacaaatcatgaaaaattgcaatgaatgaacatgattatgataaagactaacccccttaccttagatgaagattagacc 277  Q
            || ||||||| |||||||   |||| |||||||||| | |||||||||||||||| ||||||||||| ||||  |||||| | |||||  ||    
T  29666138 --------caccccattttcatacaaca-atgagaaattgcaataattgaacatgattatgatgaagactaacccacttatgttagataatgattaatcc 29666228  T
Q  278 aaacctaggcttcaatttagctcctaagct 307  Q
    |||| |||||||||||||||||||||||||    
T  29666229 aaacttaggcttcaatttagctcctaagct 29666258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 228 - 335
Target Start/End: Original strand, 23978074 - 23978182
Alignment:
Q  228 acatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctttcccaa-tggattcttcaa 326  Q
    |||||||||||||||  |||||| ||||||||||||| ||||||||  ||||||    ||||||||||||||||||||||| ||||| ||||||||||||    
T  23978074 acatgattatgataataactaacgcccttaccttagaagaagattaacccaaactcttgcttcaatttagctcctaagcttacccaattggattcttcaa 23978173  T
Q  327 gttcttctc 335  Q
    |||||||||    
T  23978174 gttcttctc 23978182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 230 - 307
Target Start/End: Original strand, 23995247 - 23995324
Alignment:
Q  230 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagct 307  Q
    |||||||||||||||||||||||||||||||||||| |||||||  || ||| ||||||||| |||||||||||||||    
T  23995247 atgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctcctaagct 23995324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 29 - 136
Target Start/End: Original strand, 25175680 - 25175787
Alignment:
Q  29 aaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcata 128  Q
    ||||||| | |||| ||||||| |||||||||| |||||||  ||||| | |||||||||||| ||||||||| |||||| ||  |||||||||||||||    
T  25175680 aaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcata 25175779  T
Q  129 caaacata 136  Q
    ||||||||    
T  25175780 caaacata 25175787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 29 - 164
Target Start/End: Complemental strand, 27654118 - 27653983
Alignment:
Q  29 aaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcata 128  Q
    ||||||| | |||| ||||||| |||||||||| |||||||  ||||| | |||||||||||| ||||||||| |||||| ||  |||||||||||||||    
T  27654118 aaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattatacaactaacatcaattcatgcata 27654019  T
Q  129 caaacatatcatcaaagttgtagcacgaatttagca 164  Q
    ||| |||| ||||| ||    |||||||||||||||    
T  27654018 caagcataacatcacagcaagagcacgaatttagca 27653983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 230 - 307
Target Start/End: Original strand, 23148303 - 23148380
Alignment:
Q  230 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagct 307  Q
    ||||||||||| |||||||||||||||||||||| | |||||||  || ||| |||||||||||||||||||||||||    
T  23148303 atgattatgatgaagactaacccccttaccttaggtaaagattaatcccaacttaggcttcaatttagctcctaagct 23148380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 150 - 304
Target Start/End: Complemental strand, 16299998 - 16299844
Alignment:
Q  150 agcacgaattt-agcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaaattgcaatgaatgaa-catgattatgataaagact 247  Q
    ||||||||||| | ||||||||||| ||||||||   ||||||||||||||||||  || | ||||||||||  ||  || |||||||| ||  ||||||    
T  16299998 agcacgaattttaacaacaattatcaattcattctaatcaacccatttcatacaa--caaggaaaattgcaaacaaacaatcatgattaagaagaagact 16299901  T
Q  248 aacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaa 304  Q
    |||||||||||||||| | | |||||  |||||| ||||||||| ||||||||||||    
T  16299900 aacccccttaccttaggtaatgattaatccaaacttaggcttcactttagctcctaa 16299844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 232 - 304
Target Start/End: Complemental strand, 15742150 - 15742078
Alignment:
Q  232 gattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaa 304  Q
    |||||||||||||||||||||||||||||||| | | |||||  |||||| ||||||||| ||||||||||||    
T  15742150 gattatgataaagactaacccccttaccttaggtaatgattaatccaaacttaggcttcactttagctcctaa 15742078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 39 - 164
Target Start/End: Complemental strand, 16825879 - 16825752
Alignment:
Q  39 attttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatca--tacaattattatcaattcatgcatacaaacata 136  Q
    |||| ||||||| |||||||||| |||||||  ||||| | |||||||||||| ||||||||| |  ||||| ||  |||||||||||||||||||||||    
T  16825879 atttagcacaatcttcataacttatcatttttgcatatatgaacatgtaatttcaccaacaattaattacaactaacatcaattcatgcatacaaacata 16825780  T
Q  137 tcatcaaagttgtagcacgaatttagca 164  Q
     ||||| ||    |||||||||||||||    
T  16825779 acatcacagcaagagcacgaatttagca 16825752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 228 - 335
Target Start/End: Original strand, 19610323 - 19610431
Alignment:
Q  228 acatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctt-tcccaatggattcttcaa 326  Q
    |||||||||||||||  |||||||||||||||||||| ||||||||  ||||||    ||||||||| |||||||||||||  |||||| ||||| ||||    
T  19610323 acatgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaa 19610422  T
Q  327 gttcttctc 335  Q
    | |||||||    
T  19610423 gctcttctc 19610431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 230 - 304
Target Start/End: Complemental strand, 32276691 - 32276617
Alignment:
Q  230 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaa 304  Q
    ||||||||||| |||||||||||||||||||||||| | |||||  |||||| || |||||| ||||||||||||    
T  32276691 atgattatgatgaagactaacccccttaccttagataatgattaatccaaacttaagcttcactttagctcctaa 32276617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 230 - 304
Target Start/End: Complemental strand, 18002427 - 18002353
Alignment:
Q  230 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaa 304  Q
    |||||||||||||||||||||||||||||||||| | | |||||  | |||| ||| ||||| ||||||||||||    
T  18002427 atgattatgataaagactaacccccttaccttaggttatgattaatctaaacttagccttcactttagctcctaa 18002353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 228 - 305
Target Start/End: Original strand, 16232197 - 16232274
Alignment:
Q  228 acatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaag 305  Q
    |||||||||||||||  |||||||||||||||||||| ||||||||  ||||||    ||||||||| ||||||||||    
T  16232197 acatgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctcctaag 16232274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 186 - 308
Target Start/End: Original strand, 1556269 - 1556390
Alignment:
Q  186 tcaacccattt-catacaaatcatgaaaaattgcaatgaatgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaaaccta 284  Q
    ||||||||||| |||||||  ||||| ||| |||||  | |||||||||||||||| |  |||||||||||||||||||| ||||||||   |||||       
T  1556269 tcaacccattttcatacaa--catgagaaaatgcaaaaattgaacatgattatgatgataactaacccccttaccttagaagaagattaacacaaactct 1556366  T
Q  285 ggcttcaatttagctcctaagctt 308  Q
     ||||||||| |||||||||||||    
T  1556367 tgcttcaattcagctcctaagctt 1556390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 194 - 304
Target Start/End: Complemental strand, 18823352 - 18823241
Alignment:
Q  194 tttcatacaaatcatgaaaaattgcaatgaatgaac-atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaa 292  Q
    ||||||||||| || ||||||||||||  ||  ||  ||||||||||| |||||||||||||||||||||| | | |||||  |||||| ||  |||||     
T  18823352 tttcatacaaaccaagaaaaattgcaaacaaacaattatgattatgatgaagactaacccccttaccttaggttatgattaatccaaacttaaacttcac 18823253  T
Q  293 tttagctcctaa 304  Q
    ||||||||||||    
T  18823252 tttagctcctaa 18823241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 194 - 304
Target Start/End: Complemental strand, 18839207 - 18839096
Alignment:
Q  194 tttcatacaaatcatgaaaaattgcaatgaatgaac-atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaa 292  Q
    ||||||||||| || ||||||||||||  ||  ||  ||||||||||| |||||||||||||||||||||| | | |||||  |||||| || ||||||     
T  18839207 tttcatacaaaccaagaaaaattgcaaacaaacaattatgattatgatgaagactaacccccttaccttaggttatgattaatccaaacttaagcttcac 18839108  T
Q  293 tttagctcctaa 304  Q
    ||||||| ||||    
T  18839107 tttagcttctaa 18839096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 230 - 304
Target Start/End: Original strand, 26090059 - 26090133
Alignment:
Q  230 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaa 304  Q
    |||||||||||||||||||||||||||||||||| | | | | |  | |||| ||||||||| ||||||||||||    
T  26090059 atgattatgataaagactaacccccttaccttaggtaatgctcaatctaaacttaggcttcactttagctcctaa 26090133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 150 - 203
Target Start/End: Original strand, 19629568 - 19629621
Alignment:
Q  150 agcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaa 203  Q
    |||||||||||| ||||||||||| ||||||||   ||||||||||||||||||    
T  19629568 agcacgaatttaacaacaattatcaattcattccaatcaacccatttcatacaa 19629621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 160
Target Start/End: Original strand, 29605596 - 29605696
Alignment:
Q  61 tttcattttcacatatt-taaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttgtagcacgaatt 159  Q
    ||||||||||||||| | | |||||||||||| ||||||||  || ||||||| |  ||||||||||| ||||||||||| || | ||  ||||||||||    
T  29605596 tttcattttcacatactatgaacatgtaatttcaccaacaacaattcaattatcactaattcatgcattcaaacatatcaccataattagagcacgaatt 29605695  T
Q  160 t 160  Q
    |    
T  29605696 t 29605696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 230 - 261
Target Start/End: Original strand, 4991396 - 4991427
Alignment:
Q  230 atgattatgataaagactaacccccttacctt 261  Q
    ||||||||||||||||||||||||||||||||    
T  4991396 atgattatgataaagactaacccccttacctt 4991427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 67 - 160
Target Start/End: Complemental strand, 18629703 - 18629608
Alignment:
Q  67 tttcacata-tttaaacatgtaatttaaccaacaatcatacaattattatcaatt-catgcatacaaacatatcatcaaagttgtagcacgaattt 160  Q
    ||||||||| ||| |||||| ||||| ||||||||  || ||||||| ||||||| ||||||| |||||||||||||| | ||  |||||||||||    
T  18629703 tttcacatactttgaacatgcaatttcaccaacaacaattcaattatcatcaatttcatgcattcaaacatatcatcataattagagcacgaattt 18629608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 305
Target Start/End: Complemental strand, 29869724 - 29869650
Alignment:
Q  231 tgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaag 305  Q
    ||||||||||||  |||||||||||||||||||| |||||| |  ||||||    ||||||||| ||||||||||    
T  29869724 tgattatgataataactaacccccttaccttagaagaagatcaacccaaactcttgcttcaattcagctcctaag 29869650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 305
Target Start/End: Complemental strand, 18086774 - 18086697
Alignment:
Q  228 acatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaag 305  Q
    ||||||||||  |||  |||||||||||||||||||| ||||||||  ||||||    ||||||||| ||||||||||    
T  18086774 acatgattatactaataactaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctcctaag 18086697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 261
Target Start/End: Original strand, 19299501 - 19299575
Alignment:
Q  186 tcaacccattt-catacaaatcatgaaaaattgcaatgaatgaacatgattatgataaagactaacccccttacctt 261  Q
    ||||||||||| |||||||  ||||| ||| ||||| || || |||||||||||||||  |||||||||||||||||    
T  19299501 tcaacccattttcatacaa--catgagaaaatgcaaagattgtacatgattatgataataactaacccccttacctt 19299575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 261
Target Start/End: Original strand, 10488972 - 10489037
Alignment:
Q  194 tttcatacaaatcatgaaaaattgcaatgaatgaacatgattatgataaagactaacccccttacctt 261  Q
    ||||||||||  ||||| ||| ||||| || || |||||||||||||||  |||||||||||||||||    
T  10488972 tttcatacaa--catgagaaaatgcaaagattgtacatgattatgataataactaacccccttacctt 10489037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 261
Target Start/End: Complemental strand, 16376356 - 16376291
Alignment:
Q  194 tttcatacaaatcatgaaaaattgcaatgaatgaacatgattatgataaagactaacccccttacctt 261  Q
    ||||||||||  ||||| ||| ||||| || || |||||||||||||||  |||||||||||||||||    
T  16376356 tttcatacaa--catgagaaaatgcaaagattgtacatgattatgataataactaacccccttacctt 16376291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 261
Target Start/End: Complemental strand, 16383680 - 16383615
Alignment:
Q  194 tttcatacaaatcatgaaaaattgcaatgaatgaacatgattatgataaagactaacccccttacctt 261  Q
    ||||||||||  ||||| ||| ||||| || || |||||||||||||||  |||||||||||||||||    
T  16383680 tttcatacaa--catgagaaaatgcaaagattgtacatgattatgataataactaacccccttacctt 16383615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 261
Target Start/End: Complemental strand, 16556122 - 16556057
Alignment:
Q  194 tttcatacaaatcatgaaaaattgcaatgaatgaacatgattatgataaagactaacccccttacctt 261  Q
    ||||||||||  ||||| ||| ||||| || || |||||||||||||||  |||||||||||||||||    
T  16556122 tttcatacaa--catgagaaaatgcaaagattgtacatgattatgataataactaacccccttacctt 16556057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 261
Target Start/End: Complemental strand, 16632678 - 16632613
Alignment:
Q  194 tttcatacaaatcatgaaaaattgcaatgaatgaacatgattatgataaagactaacccccttacctt 261  Q
    ||||||||||  ||||| ||| ||||| || || |||||||||||||||  |||||||||||||||||    
T  16632678 tttcatacaa--catgagaaaatgcaaagattgtacatgattatgataataactaacccccttacctt 16632613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 63 - 142
Target Start/End: Complemental strand, 17083296 - 17083216
Alignment:
Q  63 tcattttcacatatt-taaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatca 142  Q
    ||||||||||||| | | |||||  ||||| ||||||||  || ||||||| | |||||||||||| ||||||||||||||    
T  17083296 tcattttcacatactatgaacatacaatttcaccaacaacaattcaattatcaccaattcatgcattcaaacatatcatca 17083216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 230 - 262
Target Start/End: Complemental strand, 19983224 - 19983192
Alignment:
Q  230 atgattatgataaagactaacccccttacctta 262  Q
    |||||||||||||| ||||||||||||||||||    
T  19983224 atgattatgataaaaactaacccccttacctta 19983192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 230 - 262
Target Start/End: Complemental strand, 35015089 - 35015057
Alignment:
Q  230 atgattatgataaagactaacccccttacctta 262  Q
    |||||||||||||| ||||||||||||||||||    
T  35015089 atgattatgataaaaactaacccccttacctta 35015057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 134; Significance: 1e-69; HSPs: 3)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 44 - 303
Target Start/End: Complemental strand, 8312 - 8051
Alignment:
Q  44 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 143  Q
    |||||||||||| |||||  |||||| ||||| || ||| |||||||| |||||||||||||||||||| | ||||||||||||||||||||| |||||     
T  8312 gcacaattttcacaacttcacatttttacataattgaacctgtaatttcaccaacaatcatacaattatcaccaattcatgcatacaaacataacatcac 8213  T
Q  144 agttgtagcacgaatttagcaacaattatccattcattcatttcaacccat-ttcatacaaatcatgaaaaattgcaatgaatgaacatgattatgataa 242  Q
    ||||  |||||||||||||||||||||||||||| ||||| |||||||||| |||||||||   |||| |||||||||| |||||||||||||||||| |    
T  8212 agttagagcacgaatttagcaacaattatccatttattcaattcaacccatattcatacaacaaatgagaaattgcaataaatgaacatgattatgatga 8113  T
Q  243 agactaa-cccccttaccttagatgaagattagaccaaacctaggcttcaatttagctccta 303  Q
    ||||||| |||||||||||||||| | |||||  |||||| ||||||||| |||||||||||    
T  8112 agactaaccccccttaccttagataatgattaatccaaacttaggcttcattttagctccta 8051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 46 - 307
Target Start/End: Complemental strand, 26545 - 26295
Alignment:
Q  46 acaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaag 145  Q
    |||||||||| ||||| ||||||| |||||||| |||||||| ||| ||||| |||| ||||||||| ||||||||| ||||||||||||||||||||||    
T  26545 acaattttcacaacttatcatttttacatatttgaacatgtactttcaccaataatcttacaattatcatcaattcacgcatacaaacatatcatcaaag 26446  T
Q  146 ttgtagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaaattgcaatgaatgaacatgattatgataaaga 245  Q
    ||| ||||||||||||||||||||||| |||| ||  |         | |||||||||    |||||| || |||  ||||| |||||||||||||||||    
T  26445 ttggagcacgaatttagcaacaattatacatt-atgaa--------aaattcatacaacatttgaaaatttacaa--aatgatcatgattatgataaaga 26357  T
Q  246 ctaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagct 307  Q
    ||||||||||||||||||||||||||||  || | | |||||||||||||||||||||||||    
T  26356 ctaacccccttaccttagatgaagattaatcccatcttaggcttcaatttagctcctaagct 26295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 156 - 308
Target Start/End: Original strand, 11989 - 12141
Alignment:
Q  156 aatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaaattgcaatgaatgaacatgattatgataaagactaaccccct 255  Q
    |||||| ||||||||||| |||||||    ||||||| ||||||||||   | || || ||||||| | |||||||||||||||| ||||||||||||||    
T  11989 aatttaacaacaattatcaattcattgcaatcaacccgtttcatacaacaaaggagaagttgcaataattgaacatgattatgatgaagactaaccccct 12088  T
Q  256 taccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctt 308  Q
    || ||||||| | |||||  |||||| | ||||||||||||||||||||||||    
T  12089 tatcttagataatgattaatccaaactttggcttcaatttagctcctaagctt 12141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 133; Significance: 4e-69; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 45 - 304
Target Start/End: Original strand, 41780 - 42039
Alignment:
Q  45 cacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaa 144  Q
    ||||||||||| |||||  |||||| ||||| || |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||| |    
T  41780 cacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcaca 41879  T
Q  145 gttgtagcacgaatttagcaacaattatccattcattcatttcaacccat-ttcatacaaatcatgaaaaattgcaatgaatgaacatgattatgataaa 243  Q
    |||  |||||||||||| ||||||||||||||| ||||| |||||||||| ||||||| ||  |||| |||||| ||| |||||||||||||||||| ||    
T  41880 gttagagcacgaatttaacaacaattatccatttattcaattcaacccatattcatac-aacaatgagaaattgaaataaatgaacatgattatgatgaa 41978  T
Q  244 gactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaa 304  Q
    |||||||||||||||||||| | | |||||  |||||| ||||||||| ||||||||||||    
T  41979 gactaacccccttaccttaggtaatgattaatccaaacttaggcttcactttagctcctaa 42039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 115; Significance: 2e-58; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 46 - 263
Target Start/End: Complemental strand, 34590 - 34372
Alignment:
Q  46 acaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaag 145  Q
    |||||||||| |||||   ||||| ||| | || |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||| ||    
T  34590 acaattttcacaacttcatatttttacacaattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatcacag 34491  T
Q  146 ttgtagcacgaatttagcaacaattatccattcattcatttcaacccat-ttcatacaaatcatgaaaaattgcaatgaatgaacatgattatgataaag 244  Q
    ||  |||||||||||||||| ||||||||||||||||| |||||||||| |||||||||   |||| |||||||||| ||||||||||||||||||||      
T  34490 ttagagcacgaatttagcaataattatccattcattcaattcaacccatattcatacaacaaatgagaaattgcaataaatgaacatgattatgataata 34391  T
Q  245 actaacccccttaccttag 263  Q
    |||||||| ||||||||||    
T  34390 actaaccctcttaccttag 34372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 113; Significance: 4e-57; HSPs: 3)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 44 - 307
Target Start/End: Complemental strand, 3714 - 3463
Alignment:
Q  44 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 143  Q
    |||||||||||| ||||| ||||||| |||||||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||     
T  3714 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcac 3615  T
Q  144 agttgtagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaaattgcaatgaatgaacatgattatgataaa 243  Q
    ||||| |||||||||||||||||||||||| ||  | |||         | ||||||||| |  |||||| || |||  |||||| |||||||||| |||    
T  3614 agttggagcacgaatttagcaacaattatctat--aatca--------aaattcatacaacttttgaaaatttacaa--aatgaagatgattatgacaaa 3527  T
Q  244 gactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagct 307  Q
    |||||||||||||||||||||| |||||||  || ||| ||||||||| |||||||||||||||    
T  3526 gactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctcctaagct 3463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 44 - 176
Target Start/End: Original strand, 1255 - 1387
Alignment:
Q  44 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 143  Q
    |||||||||||| ||||| ||||||| |||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  1255 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattattatcaattcatgcatactaacatatcatcaa 1354  T
Q  144 agttgtagcacgaatttagcaacaattatccat 176  Q
    ||||| |||||||||||||||||||||||||||    
T  1355 agttggagcacgaatttagcaacaattatccat 1387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 230 - 307
Target Start/End: Original strand, 1430 - 1507
Alignment:
Q  230 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagct 307  Q
    |||||||||||||||||||||||||||||||||||| |||||||  |  ||| ||||||||| |||||||||||||||    
T  1430 atgattatgataaagactaacccccttaccttagataaagattaatcacaacttaggcttcactttagctcctaagct 1507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 101; Significance: 5e-50; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 44 - 304
Target Start/End: Original strand, 48318 - 48578
Alignment:
Q  44 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 143  Q
    |||||||||||| ||||| ||||||| ||| |||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| |     
T  48318 gcacaattttcacaacttatcatttttacacatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcattac 48417  T
Q  144 agttgtagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaaattgcaatgaatgaa--catgattatgata 241  Q
    ||||| |||||||||||||||||||||||| ||||||||    |||||||||||||||||  || | ||||||||||  ||   |  |||||||||||      
T  48418 agttggagcacgaatttagcaacaattatcaattcattccaaccaacccatttcatacaa--caaggaaaattgcaaacaaaacattcatgattatgaag 48515  T
Q  242 aagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaa 304  Q
    ||||||||||||||||| |||| | | |||||   ||||  | ||||||| ||||||||||||    
T  48516 aagactaacccccttacattaggttatgattaattcaaatttgggcttcactttagctcctaa 48578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 100; Significance: 2e-49; HSPs: 2)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 29 - 176
Target Start/End: Complemental strand, 1103 - 956
Alignment:
Q  29 aaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcata 128  Q
    ||||||||| |||  |||||||||||| ||||| | ||||| |||||||| |||||||||||| |||||||||||||||||||| |||||||||||||||    
T  1103 aaattcatcaattgagcacaattttcacaacttattatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcata 1004  T
Q  129 caaacatatcatcaaagttgtagcacgaatttagcaacaattatccat 176  Q
    |||||||||||||| ||||| |||||||||||||||||||||||||||    
T  1003 caaacatatcatcacagttggagcacgaatttagcaacaattatccat 956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 273
Target Start/End: Complemental strand, 919 - 871
Alignment:
Q  225 tgaacatgattatgataaagactaacccccttaccttagatgaagatta 273  Q
    |||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  919 tgaagatgattatgataaagactaacccccttaccttagaagaagatta 871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 98; Significance: 3e-48; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 29 - 307
Target Start/End: Original strand, 12229 - 12495
Alignment:
Q  29 aaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcata 128  Q
    ||||||| | |||| |||||||||||| ||||| ||||||| ||| ||||||||||||| ||| |||||||||||||||||||| |||||||||||||||    
T  12229 aaattcaccaatttagcacaattttcacaacttatcatttttacacatttaaacatgtattttcaccaacaatcatacaattatcatcaattcatgcata 12328  T
Q  129 caaacatatcatcaaagttgtagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaaattgcaatgaatgaa 228  Q
    |||||||||||||| ||||  |||||||||||||||||||||||||||  | |||    ||   ||||||||||     || ||| || |||  ||| ||    
T  12329 caaacatatcatcacagttagagcacgaatttagcaacaattatccat--aatca----aa---atttcatacagcatttg-aaagttacaa--aattaa 12416  T
Q  229 catgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagct 307  Q
     ||||||||||||||||||||||||||||||||||||  ||||||  || ||| ||||||||| |||||||||||||||    
T  12417 gatgattatgataaagactaacccccttaccttagatagagattaatcctaacttaggcttcactttagctcctaagct 12495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195 (Bit Score: 98; Significance: 3e-48; HSPs: 2)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 44 - 177
Target Start/End: Original strand, 19337 - 19470
Alignment:
Q  44 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 143  Q
    |||||||||||| ||||| ||||||| |||||||| |||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||||||||     
T  19337 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcac 19436  T
Q  144 agttgtagcacgaatttagcaacaattatccatt 177  Q
    ||||| ||||||||||||||||||||||||||||    
T  19437 agttggagcacgaatttagcaacaattatccatt 19470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 44 - 176
Target Start/End: Original strand, 21421 - 21553
Alignment:
Q  44 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 143  Q
    |||||||||||| ||||| ||||||| |||||||| |||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||||||||     
T  21421 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcac 21520  T
Q  144 agttgtagcacgaatttagcaacaattatccat 176  Q
    ||||| |||||||||||||||||||||||||||    
T  21521 agttggagcacgaatttagcaacaattatccat 21553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 95; Significance: 2e-46; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 44 - 304
Target Start/End: Complemental strand, 128301 - 128053
Alignment:
Q  44 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 143  Q
    |||||||||||| |||||  ||  || ||| |||| |||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||||||||     
T  128301 gcacaattttcacaacttaacacctttacacatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcac 128202  T
Q  144 agttgtagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaaattgcaatgaatgaacatgattatgataaa 243  Q
    ||||| ||||||||||||||||||||||||||          | | |  | ||||||||| |  |||||| ||||||  |||||| ||||||||||||||    
T  128201 agttgaagcacgaatttagcaacaattatcca----------taagcaaaattcatacaacttttgaaaatttgcaa--aatgaagatgattatgataaa 128114  T
Q  244 gactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaa 304  Q
    |||||||||||||||||||||| |||||||  || ||| ||||||||| |||| |||||||    
T  128113 gactaacccccttaccttagataaagattaatcccaacttaggcttcattttatctcctaa 128053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 52 - 142
Target Start/End: Complemental strand, 31787 - 31697
Alignment:
Q  52 ttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatca 142  Q
    |||||||||| |||||||  ||||| | || ||||||||| |||||||||||||||| ||  |||||||||||||| |||||||| |||||    
T  31787 ttcataacttatcatttttgcatatatgaatatgtaatttcaccaacaatcatacaactaacatcaattcatgcattcaaacataacatca 31697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 94; Significance: 8e-46; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 44 - 308
Target Start/End: Complemental strand, 6196 - 5944
Alignment:
Q  44 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 143  Q
    |||||||||| | ||||| | ||||| |||||||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||     
T  6196 gcacaatttttacaacttattatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcac 6097  T
Q  144 agttgtagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaaattgcaatgaatgaacatgattatgataaa 243  Q
    ||||| |||||||||||||||||||||||||||  | |||        || |||||||||    ||| || ||||||  | |||| ||||||||||||||    
T  6096 agttggagcacgaatttagcaacaattatccat--aatca--------caattcatacaacatttgagaatttgcaa--agtgaaaatgattatgataaa 6009  T
Q  244 gactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctt 308  Q
    ||||||||||||||||||||||  ||||||  || |||    ||||||||| |||||||||||||    
T  6008 gactaacccccttaccttagatagagattaatcctaactcttgcttcaattcagctcctaagctt 5944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 94; Significance: 8e-46; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 44 - 307
Target Start/End: Complemental strand, 247574 - 247321
Alignment:
Q  44 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 143  Q
    |||||||||||| ||||| ||||||   | ||||| |||||| ||||| |||  ||||||||||||||| ||||||||||||||||||||||||||| |     
T  247574 gcacaattttcacaacttatcatttgttcctatttgaacatgaaatttcaccctcaatcatacaattatcatcaattcatgcatacaaacatatcattac 247475  T
Q  144 agttgtagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaaattgcaatgaatgaacatgattatgataaa 243  Q
    ||||| |||||||||||||||||||||||||||| || ||    ||   | |||||||||    |||||| || |||  |||||  ||||||||||||||    
T  247474 agttggagcacgaatttagcaacaattatccatt-atgca----aa---aattcatacaacatttgaaaatttacaa--aatgatgatgattatgataaa 247385  T
Q  244 gactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagct 307  Q
    |||||||||||||||||||||| |||||||  || ||| |||||||||||||||||||||||||    
T  247384 gactaacccccttaccttagataaagattaatcccaacttaggcttcaatttagctcctaagct 247321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 186 - 308
Target Start/End: Complemental strand, 34150 - 34029
Alignment:
Q  186 tcaacccatttcatacaaatcatgaaaaattgcaatgaatgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctag 285  Q
    ||||||||||||||||||   |||| ||| |||||  | |||||||||||||||| ||||||||||||||||||||||||||||||||  ||||||        
T  34150 tcaacccatttcatacaaca-atgagaaaatgcaaaaattgaacatgattatgatgaagactaacccccttaccttagatgaagattaacccaaactctt 34052  T
Q  286 gcttcaatttagctcctaagctt 308  Q
    |||||||||||||||||||||||    
T  34051 gcttcaatttagctcctaagctt 34029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 93; Significance: 3e-45; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 29 - 177
Target Start/End: Complemental strand, 37060 - 36912
Alignment:
Q  29 aaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcata 128  Q
    ||||||| | |||| |||||||||||| ||||| ||||||| |||||||| |||||||||||| |||||||| | ||||||||| |||||||||||||||    
T  37060 aaattcaccaatttagcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaagcttacaattatcatcaattcatgcata 36961  T
Q  129 caaacatatcatcaaagttgtagcacgaatttagcaacaattatccatt 177  Q
    |||||||||||||| ||||| |||||||||||| |||||||||||||||    
T  36960 caaacatatcatcacagttggagcacgaatttaacaacaattatccatt 36912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 230 - 307
Target Start/End: Complemental strand, 36869 - 36789
Alignment:
Q  230 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttca---atttagctcctaagct 307  Q
    ||||||||||||||||||||||||||||||||| || |||||||  || ||| |||||||||    |||||||||||||||    
T  36869 atgattatgataaagactaacccccttaccttaaataaagattaatcccaacttaggcttcacttctttagctcctaagct 36789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 93; Significance: 3e-45; HSPs: 5)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 44 - 176
Target Start/End: Original strand, 48729 - 48861
Alignment:
Q  44 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 143  Q
    |||||||||||| ||||| |||||||  | ||||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||     
T  48729 gcacaattttcacaacttatcattttttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcac 48828  T
Q  144 agttgtagcacgaatttagcaacaattatccat 176  Q
    ||||| |||||||||||||||||||||||||||    
T  48829 agttggagcacgaatttagcaacaattatccat 48861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 29 - 142
Target Start/End: Original strand, 36210 - 36323
Alignment:
Q  29 aaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcata 128  Q
    ||||||| | |||| ||||||| |||||||||| |||||||  ||||| | || ||||||||| |||||||||||||||| ||  |||||||||| ||||    
T  36210 aaattcaccaatttagcacaatcttcataacttatcatttttgcatatatgaatatgtaatttcaccaacaatcatacaactaacatcaattcatacata 36309  T
Q  129 caaacatatcatca 142  Q
    |||||||| |||||    
T  36310 caaacataacatca 36323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 228 - 308
Target Start/End: Complemental strand, 153958 - 153878
Alignment:
Q  228 acatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctt 308  Q
    |||||||||||||||  |||||||||||||||||||| ||||||||   |||||    ||||||||| |||||||||||||    
T  153958 acatgattatgataataactaacccccttaccttagaagaagattaactcaaactcttgcttcaattcagctcctaagctt 153878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 230 - 263
Target Start/End: Original strand, 48903 - 48936
Alignment:
Q  230 atgattatgataaagactaacccccttaccttag 263  Q
    ||||||||||||||||||||||||||||||||||    
T  48903 atgattatgataaagactaacccccttaccttag 48936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 263
Target Start/End: Complemental strand, 61191 - 61121
Alignment:
Q  194 tttcatacaaatcatgaaaaattgcaatgaatgaac-atgattatgataaagactaacccccttaccttag 263  Q
    ||||||||||| || ||||||||||||  ||  ||  ||||||||||| ||||||||||||||||||||||    
T  61191 tttcatacaaaccaagaaaaattgcaaacaaacaattatgattatgatgaagactaacccccttaccttag 61121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 44 - 307
Target Start/End: Complemental strand, 51314 - 51063
Alignment:
Q  44 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 143  Q
    |||||||||||| ||||| ||||||| || ||||| |||||||||||| |||||||||| ||||||||| ||||||||||||||||||| |||||||||     
T  51314 gcacaattttcacaacttatcatttttacctatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaatatatcatcac 51215  T
Q  144 agttgtagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaaattgcaatgaatgaacatgattatgataaa 243  Q
    ||||| ||||||||||||||||||||||||||          | | |  | |||||||||    |||||| || |||  |||||  ||||||||||||||    
T  51214 agttggagcacgaatttagcaacaattatcca----------taagcaaaattcatacaacatttgaaaatttacaa--aatgatgatgattatgataaa 51127  T
Q  244 gactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagct 307  Q
    |||||| | |||||||| |||| |||||||  || ||| |||||||||||||||||||||||||    
T  51126 gactaatctccttacctaagataaagattaatcccaacttaggcttcaatttagctcctaagct 51063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 88; Significance: 3e-42; HSPs: 4)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 44 - 175
Target Start/End: Original strand, 8980 - 9111
Alignment:
Q  44 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 143  Q
    |||||||||||| |||||  |||||| ||||| || |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||     
T  8980 gcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcac 9079  T
Q  144 agttgtagcacgaatttagcaacaattatcca 175  Q
    || || ||||||||||||||||||||||||||    
T  9080 agatggagcacgaatttagcaacaattatcca 9111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 44 - 173
Target Start/End: Original strand, 148852 - 148981
Alignment:
Q  44 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 143  Q
    |||||||||||| ||||| ||||||| |||||||| |||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||||||||     
T  148852 gcacaattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcttacaattatcatcaattcatgcatacaaacatatcatcac 148951  T
Q  144 agttgtagcacgaatttagcaacaattatc 173  Q
    ||||| ||||| |||||| |||||||||||    
T  148952 agttggagcacaaatttaacaacaattatc 148981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 230 - 307
Target Start/End: Original strand, 146906 - 146983
Alignment:
Q  230 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagct 307  Q
    |||||||||||||||||||||||||||||||||||| |||||||  || ||| |||||||||||||||||||||||||    
T  146906 atgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcaatttagctcctaagct 146983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 230 - 307
Target Start/End: Original strand, 9160 - 9237
Alignment:
Q  230 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagct 307  Q
    ||||||||||| ||||||||| | |||||||||||| | |||||  |  ||| ||||||||| |||||||||||||||    
T  9160 atgattatgatgaagactaacacacttaccttagattatgattaacctcaacttaggcttcactttagctcctaagct 9237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0498 (Bit Score: 86; Significance: 5e-41; HSPs: 1)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 44 - 307
Target Start/End: Original strand, 9009 - 9260
Alignment:
Q  44 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 143  Q
    |||||||||||| |||||  |||||| ||||| || |||||||||||| |||||||||| ||||||||| ||| ||||||||||||||||||| |||||     
T  9009 gcacaattttcacaacttaacatttttacataattgaacatgtaatttcaccaacaatcttacaattatcatcgattcatgcatacaaacataacatcac 9108  T
Q  144 agttgtagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaaattgcaatgaatgaacatgattatgataaa 243  Q
    |  || ||||||||||||||||||||| ||||          | | |  | ||| ||||| |  |||||| ||||||  |||||| ||||||||||||||    
T  9109 aaatggagcacgaatttagcaacaattttcca----------taagcaaaattcgtacaacttttgaaaatttgcaa--aatgaagatgattatgataaa 9196  T
Q  244 gactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagct 307  Q
    |||||||||||||||||||||| |||||||  || ||| ||||||||| |||||||||||||||    
T  9197 gactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctcctaagct 9260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 86; Significance: 5e-41; HSPs: 4)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 44 - 307
Target Start/End: Complemental strand, 89586 - 89333
Alignment:
Q  44 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 143  Q
    |||||||||||| ||||| | ||||   | ||||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||| |||||||||     
T  89586 gcacaattttcacaacttataatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaatatatcatcac 89487  T
Q  144 agttgtagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaaattgcaatgaatgaacatgattatgataaa 243  Q
    ||||| |||||||||||||||||||||||||||| || ||    ||   | |||||| ||    |||||| || |||  |||||  ||||| ||||| ||    
T  89486 agttggagcacgaatttagcaacaattatccatt-atgca----aa---aattcatagaacatttgaaaatttacaa--aatgatgatgatcatgatgaa 89397  T
Q  244 gactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagct 307  Q
    |||||||||||||||||||||| |||||||  || ||| |||||||||||||| ||||||||||    
T  89396 gactaacccccttaccttagataaagattaatcccaacttaggcttcaatttaactcctaagct 89333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 230 - 307
Target Start/End: Complemental strand, 107740 - 107663
Alignment:
Q  230 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagct 307  Q
    ||||| ||||| |||||||||||||||||||||||| |||||||  || ||| |||||||||||||| ||||||||||    
T  107740 atgatcatgatgaagactaacccccttaccttagataaagattaatcccaacttaggcttcaatttaactcctaagct 107663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 125 - 177
Target Start/End: Complemental strand, 107835 - 107783
Alignment:
Q  125 catacaaacatatcatcaaagttgtagcacgaatttagcaacaattatccatt 177  Q
    |||||||| ||||||||| ||||| |||||||||||||||| |||||||||||    
T  107835 catacaaatatatcatcacagttggagcacgaatttagcaaaaattatccatt 107783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 230 - 303
Target Start/End: Original strand, 130880 - 130953
Alignment:
Q  230 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctccta 303  Q
    |||||||||||||||||||||||||||||||| || || |||||  || ||||   ||||||||| ||||||||    
T  130880 atgattatgataaagactaacccccttacctttgaagatgattatgcctaacccttgcttcaattcagctccta 130953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 86; Significance: 5e-41; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 44 - 177
Target Start/End: Complemental strand, 123296 - 123163
Alignment:
Q  44 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 143  Q
    |||||||||||| ||||| ||||||   | ||||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||     
T  123296 gcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcac 123197  T
Q  144 agttgtagcacgaatttagcaacaattatccatt 177  Q
    | ||| ||||||||||||||||||||||||||||    
T  123196 aattggagcacgaatttagcaacaattatccatt 123163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 230 - 307
Target Start/End: Complemental strand, 123119 - 123042
Alignment:
Q  230 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagct 307  Q
    ||||||||| | |||||||||||||||||||||| | |||||||  || ||| |||||||||||||||||||||||||    
T  123119 atgattatggtgaagactaacccccttaccttaggtaaagattaatcccaacttaggcttcaatttagctcctaagct 123042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 86; Significance: 5e-41; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 29 - 307
Target Start/End: Original strand, 172021 - 172287
Alignment:
Q  29 aaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcata 128  Q
    ||||||| | |||| |||||||||||| ||||| ||||||   | ||||| |||||||||||| |||| ||||||||||||||| |||||||||| ||||    
T  172021 aaattcaccaatttagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccatcaatcatacaattatcatcaattcatccata 172120  T
Q  129 caaacatatcatcaaagttgtagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaaattgcaatgaatgaa 228  Q
    |||||||||||||| ||||| |||||| ||||||||||| ||||||||  | |||    ||   |||| ||||||    |||||| || |||  |||||     
T  172121 caaacatatcatcacagttggagcacgtatttagcaacagttatccat--aatca----aa---attt-atacaacatttgaaaatttacaa--aatgat 172208  T
Q  229 catgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagct 307  Q
     |||||||||||||||||||||||||||||||||||| |||||||  || ||| ||||||||| |||||||||||||||    
T  172209 gatgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctcctaagct 172287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 29 - 307
Target Start/End: Original strand, 177724 - 177990
Alignment:
Q  29 aaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcata 128  Q
    ||||||| | |||| |||||||||||| ||||| ||||||   | ||||| |||||||||||| |||| ||||||||||||||| |||||||||| ||||    
T  177724 aaattcaccaatttagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttcaccatcaatcatacaattatcatcaattcatccata 177823  T
Q  129 caaacatatcatcaaagttgtagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaaattgcaatgaatgaa 228  Q
    |||||||||||||| ||||| |||||| ||||||||||| ||||||||  | |||    ||   |||| ||||||    |||||| || |||  |||||     
T  177824 caaacatatcatcacagttggagcacgtatttagcaacagttatccat--aatca----aa---attt-atacaacatttgaaaatttacaa--aatgat 177911  T
Q  229 catgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagct 307  Q
     |||||||||||||||||||||||||||||||||||| |||||||  || ||| ||||||||| |||||||||||||||    
T  177912 gatgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctcctaagct 177990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 304
Target Start/End: Complemental strand, 164983 - 164829
Alignment:
Q  150 agcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaaattgcaa--tgaatgaacatgattatgataaagact 247  Q
    |||||||||||| ||||||||||| ||||||||   |||| |||||||||||||  || | ||||||||||    ||  | |||||||||||  || |||    
T  164983 agcacgaatttaacaacaattatcaattcattccaatcaatccatttcatacaa--caaggaaaattgcaaacaaaacaatcatgattatgaagaacact 164886  T
Q  248 aacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaa 304  Q
    |||||||||||||||| | | |||||   ||||  || |||||| ||||||||||||    
T  164885 aacccccttaccttaggttatgattaattcaaatttaagcttcactttagctcctaa 164829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1542 (Bit Score: 84; Significance: 7e-40; HSPs: 1)
Name: scaffold1542
Description:

Target: scaffold1542; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 74 - 177
Target Start/End: Complemental strand, 636 - 533
Alignment:
Q  74 tatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttgtagcacgaatttagcaacaattatc 173  Q
    ||||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  636 tatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatc 537  T
Q  174 catt 177  Q
    ||||    
T  536 catt 533  T

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Target: scaffold0361 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 83 - 304
Target Start/End: Original strand, 3360 - 3578
Alignment:
Q  83 atgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttgtagcacgaatttagcaacaattatccattcattc 182  Q
    ||||||||| |||||||||||||||| ||| || ||||||||||||||||| || ||||| || |  ||||||||||||||| |||||||||||| ||||    
T  3360 atgtaatttcaccaacaatcatacaaatatcattaattcatgcatacaaacttaacatcacagctagagcacgaatttagcatcaattatccatttattc 3459  T
Q  183 atttcaacccatttcatacaaatcatgaaaaattgcaatgaatgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaaacc 282  Q
    |  ||||||||||||| |  ||  | || |||||||||| |||||||||||||||||  |||| ||| ||||||||||||||||| |||||   |||||     
T  3460 a-atcaacccatttcaca-taacaaggagaaattgcaataaatgaacatgattatgaggaagaataa-ccccttaccttagatgatgattaattcaaact 3556  T
Q  283 taggcttcaatttagctcctaa 304  Q
    ||||||||| ||||||||||||    
T  3557 taggcttcactttagctcctaa 3578  T

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Target: scaffold0218 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 44 - 177
Target Start/End: Complemental strand, 5193 - 5060
Alignment:
Q  44 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 143  Q
    |||||||||||| ||||| ||||||| |||||||| |||||||| ||| |||||||||| ||||||||| ||||||||| ||||||||||||||| |||     
T  5193 gcacaattttcacaacttatcatttttacatatttgaacatgtactttcaccaacaatcttacaattatcatcaattcacgcatacaaacatatcgtcac 5094  T
Q  144 agttgtagcacgaatttagcaacaattatccatt 177  Q
    ||||| || |||||||||||||||||||||||||    
T  5093 agttggagtacgaatttagcaacaattatccatt 5060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 81; Significance: 4e-38; HSPs: 2)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 44 - 176
Target Start/End: Original strand, 41860 - 41992
Alignment:
Q  44 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 143  Q
    |||||||||||| || || ||||||| |||||||| | |||||||||| |||||||||   |||||||| |||||||||||||||||||||||||||||     
T  41860 gcacaattttcacaaattatcatttttacatatttgagcatgtaatttcaccaacaatatgacaattatcatcaattcatgcatacaaacatatcatcac 41959  T
Q  144 agttgtagcacgaatttagcaacaattatccat 176  Q
    ||||| |||||||||||||||||||||||||||    
T  41960 agttggagcacgaatttagcaacaattatccat 41992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 230 - 307
Target Start/End: Original strand, 42034 - 42111
Alignment:
Q  230 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagct 307  Q
    ||||||||||||||||| |||||||||||||||||| || ||||  || ||| ||| |||||||||| ||||||||||    
T  42034 atgattatgataaagaccaacccccttaccttagataaatattaatcccaacttagacttcaatttacctcctaagct 42111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 79; Significance: 7e-37; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 79 - 305
Target Start/End: Complemental strand, 56196 - 55970
Alignment:
Q  79 aaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttgtagcacgaatttagcaacaattatccattc 178  Q
    ||||||||||||| | | |||||||||||||||| ||||| ||||||| || || ||| ||||| ||||  |||||||||||| ||||||||||| ||||    
T  56196 aaacatgtaatttcagccacaatcatacaattatcatcaaatcatgcacacgaaaataacatcacagttagagcacgaatttaacaacaattatctattc 56097  T
Q  179 attcatttcaacccatttcatacaaatcatgaaaaattgcaatgaatgaacatgattatgataaagactaacccccttaccttagatgaagattagacca 278  Q
    ||||   |||||| |||||||||||     || || ||||||| | |||||||||||||||| |||||||||||||| ||| ||||| | |||||  |||    
T  56096 attccaatcaaccaatttcatacaacaagggagaagttgcaataattgaacatgattatgatgaagactaaccccctgaccgtagataatgattaatcca 55997  T
Q  279 aacctaggcttcaatttagctcctaag 305  Q
    ||| ||||||| |||||| ||||||||    
T  55996 aacttaggctttaatttatctcctaag 55970  T

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Target: scaffold0026 (Bit Score: 75; Significance: 2e-34; HSPs: 4)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 44 - 170
Target Start/End: Original strand, 107878 - 108004
Alignment:
Q  44 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 143  Q
    |||||||||| | ||||| |||||||  || |||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| |     
T  107878 gcacaatttttacaacttatcatttttgcacatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacatatcattac 107977  T
Q  144 agttgtagcacgaatttagcaacaatt 170  Q
    ||||| ||||||||||||| |||||||    
T  107978 agttggagcacgaatttagtaacaatt 108004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 44 - 119
Target Start/End: Complemental strand, 64648 - 64573
Alignment:
Q  44 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaat 119  Q
    ||||||| |||||||||| ||||||| ||||||||||||||||||||| ||||||||||||||||| || ||||||    
T  64648 gcacaatattcataacttatcatttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaat 64573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 119 - 161
Target Start/End: Complemental strand, 89905 - 89863
Alignment:
Q  119 ttcatgcatacaaacatatcatcaaagttgtagcacgaattta 161  Q
    |||||||||||||||||||||||| ||||| ||||||||||||    
T  89905 ttcatgcatacaaacatatcatcatagttggagcacgaattta 89863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 228 - 305
Target Start/End: Complemental strand, 64472 - 64395
Alignment:
Q  228 acatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaag 305  Q
    |||||||| ||||||  |||||||||||||||||||| ||||||||  ||||||    ||||||||| ||||||||||    
T  64472 acatgattgtgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctcctaag 64395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 44 - 142
Target Start/End: Complemental strand, 13445 - 13347
Alignment:
Q  44 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatca 142  Q
    |||| ||||||| ||||| ||||||| |||||||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  13445 gcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatca 13347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 67; Significance: 1e-29; HSPs: 4)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 44 - 142
Target Start/End: Complemental strand, 9469 - 9371
Alignment:
Q  44 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatca 142  Q
    |||| ||||||| ||||| ||||||| |||||||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  9469 gcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatca 9371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 44 - 142
Target Start/End: Complemental strand, 16367 - 16269
Alignment:
Q  44 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatca 142  Q
    |||| ||||||| ||||| ||||||| |||||||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  16367 gcaccattttcacaacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcatacaaacataacatca 16269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 304
Target Start/End: Complemental strand, 9299 - 9223
Alignment:
Q  228 acatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaa 304  Q
    |||||||| ||||||  ||||||||||||||||||||||| | |||  |  ||| ||||||||| ||||||||||||    
T  9299 acatgattgtgataataactaacccccttaccttagatgatgtttaatcttaacttaggcttcactttagctcctaa 9223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 304
Target Start/End: Complemental strand, 16197 - 16121
Alignment:
Q  228 acatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaa 304  Q
    |||||||| ||||||  ||||||||||||||||||||||| | |||  |  ||| ||||||||| ||||||||||||    
T  16197 acatgattgtgataataactaacccccttaccttagatgatgtttaatcttaacttaggcttcactttagctcctaa 16121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 67; Significance: 1e-29; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 44 - 142
Target Start/End: Original strand, 167 - 265
Alignment:
Q  44 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatca 142  Q
    ||||||| | |||||||| ||||||| ||||||||||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||| |||||    
T  167 gcacaatatacataacttatcatttttacatatttaaacatgtaatttcaccaacaatcatacaatcatcatcaattcatgcatacaaacataacatca 265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 228 - 308
Target Start/End: Original strand, 336 - 416
Alignment:
Q  228 acatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctt 308  Q
    |||||||| ||||||  |||||||||||||||||||| ||||||||  ||||||    ||||||||| |||||||||||||    
T  336 acatgattttgataataactaacccccttaccttagaagaagattaatccaaactctcgcttcaattcagctcctaagctt 416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 29 - 307
Target Start/End: Original strand, 272141 - 272407
Alignment:
Q  29 aaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcata 128  Q
    ||||||| | |||| |||||||||||| ||||| ||||||   | ||||| ||||||||||||  ||| ||||||||||||||| |||||||||| ||||    
T  272141 aaattcaccaatttagcacaattttcacaacttatcatttgttcctatttgaacatgtaatttctccatcaatcatacaattatcatcaattcattcata 272240  T
Q  129 caaacatatcatcaaagttgtagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaaattgcaatgaatgaa 228  Q
    |||||||||||| | ||||| || ||| ||||||||| | ||||||||  | |||    ||   |||| ||||||    |||||| || |||  |||||     
T  272241 caaacatatcattacagttggagtacgtatttagcaatatttatccat--aatca----aa---attt-atacaatatttgaaaatttacaa--aatgat 272328  T
Q  229 catgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagct 307  Q
     |||||||||||||||||||||||||||||||||||| |||||||  || ||| ||||||||| |||||||||| ||||    
T  272329 gatgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctcctgagct 272407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 65; Significance: 2e-28; HSPs: 2)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 29 - 141
Target Start/End: Original strand, 43114 - 43226
Alignment:
Q  29 aaattcatccattttgcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcata 128  Q
    ||||||| | |||| ||||||| ||||||||||  |||||| |||||||| |||||||||||| |||||||||||||||||||| |||||||||||||||    
T  43114 aaattcaccaatttagcacaatcttcataacttaacatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgcata 43213  T
Q  129 caaacatatcatc 141  Q
     ||||||| ||||    
T  43214 gaaacataacatc 43226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 261
Target Start/End: Original strand, 39376 - 39441
Alignment:
Q  194 tttcatacaaatcatgaaaaattgcaatgaatgaacatgattatgataaagactaacccccttacctt 261  Q
    ||||||||||  ||||| ||| ||||| || || |||||||||||||||  |||||||||||||||||    
T  39376 tttcatacaa--catgagaaaatgcaaagattgtacatgattatgataataactaacccccttacctt 39441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529 (Bit Score: 64; Significance: 6e-28; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 44 - 327
Target Start/End: Original strand, 3094 - 3366
Alignment:
Q  44 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 143  Q
    |||||||||||| |||||  |||||| ||||| || |||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||| |||||     
T  3094 gcacaattttcacaacttcacatttttacataattgaacatgtaatttcaccaacaatcatacaattatcatcaattcatggatacaaacataacatcac 3193  T
Q  144 agttgtagcacgaatttagcaacaattatccattcattcatttcaaccca-tttcatacaaatcatgaaaaattgcaatgaatgaacatgattatgataa 242  Q
    ||    |||||||||||||||| |||| | ||          |||||||| ||||||||||  ||||| ||| |||||  | || |||| ||||||||||    
T  3194 agcaagagcacgaatttagcaagaattgttca----------tcaacccattttcatacaa--catgagaaaatgcaa-aattgtacataattatgataa 3280  T
Q  243 agactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctt-tcccaatggattcttcaag 327  Q
      | |||||||||||||||||| ||||||||  | ||||    ||||||||| |||||||||||||  |||||| |||||||||||    
T  3281 taattaacccccttaccttagaagaagattaaccgaaactcttgcttcaattcagctcctaagcttaccccaattgattcttcaag 3366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 45 - 126
Target Start/End: Complemental strand, 5335 - 5254
Alignment:
Q  45 cacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgca 126  Q
    ||||||||||||||||| ||||||| |||||||| |||||||||||| |||||||||||||||||||| |||||||||||||    
T  5335 cacaattttcataacttatcatttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgca 5254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0597 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0597
Description:

Target: scaffold0597; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 230 - 305
Target Start/End: Complemental strand, 910 - 835
Alignment:
Q  230 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaag 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||  || ||| |||||||||||||||||||||||    
T  910 atgattatgataaagactaacccccttaccttagatgaagattaatcccaacttaggcttcaatttagctcctaag 835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0465 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0465
Description:

Target: scaffold0465; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 230 - 305
Target Start/End: Complemental strand, 9914 - 9839
Alignment:
Q  230 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaag 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||  || ||| |||||||||||||||||||||||    
T  9914 atgattatgataaagactaacccccttaccttagatgaagattaatcccaacttaggcttcaatttagctcctaag 9839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 59; Significance: 6e-25; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 44 - 142
Target Start/End: Complemental strand, 14181 - 14083
Alignment:
Q  44 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatca 142  Q
    ||||||| |||||||||| ||||||| |||||||| |||||||||||| || |||||||||| |||||| ||||||||||||||||| ||||| |||||    
T  14181 gcacaatcttcataacttatcatttttacatatttcaacatgtaatttcactaacaatcatataattatcatcaattcatgcatacagacataacatca 14083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 47 - 142
Target Start/End: Complemental strand, 21233 - 21138
Alignment:
Q  47 caattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatca 142  Q
    |||| |||||||||| ||||||| |||||||| |||||||||||| || |||||||||| |||||| ||||||| ||| ||||||||||| |||||    
T  21233 caatcttcataacttatcatttttacatatttgaacatgtaatttcactaacaatcatataattatcatcaattaatggatacaaacataacatca 21138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 59; Significance: 6e-25; HSPs: 3)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 79 - 307
Target Start/End: Original strand, 45197 - 45415
Alignment:
Q  79 aaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttgtagcacgaatttagcaacaattatccattc 178  Q
    ||||||||||||| ||| |||||||||||||||| ||||||||||||| |  || ||| ||||| |      ||||||||||| |||||||||| |||      
T  45197 aaacatgtaatttcacccacaatcatacaattatcatcaattcatgcacatcaaaatagcatcacaacaagggcacgaatttaacaacaattattcat-- 45294  T
Q  179 attcatttcaacccattt-catacaaatcatgaaaaattgcaatgaatgaacatgattatgataaagactaacccccttaccttagatgaagattagacc 277  Q
            |||||||||| |||||||   |||| |||||||||| | |||||||||||||||| |||||||||||||||||||||||| | | |||  ||    
T  45295 --------caacccattttcatacaaca-atgagaaattgcaataattgaacatgattatgatgaagactaacccccttaccttagataatggttaatcc 45385  T
Q  278 aaacctaggcttcaatttagctcctaagct 307  Q
    |||| |||||||||||| ||||||||||||    
T  45386 aaacttaggcttcaattaagctcctaagct 45415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 207 - 307
Target Start/End: Original strand, 54701 - 54801
Alignment:
Q  207 atgaaaaattgcaatgaatgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagc 306  Q
    |||| |||||||||| | |||||||||||||||| |||||||||| ||||||||||||| | | |||  |||||| || ||||||||| |||||||||||    
T  54701 atgagaaattgcaataattgaacatgattatgatgaagactaaccaccttaccttagataatggttaatccaaacttaagcttcaattaagctcctaagc 54800  T
Q  307 t 307  Q
    |    
T  54801 t 54801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 79 - 126
Target Start/End: Original strand, 54583 - 54630
Alignment:
Q  79 aaacatgtaatttaaccaacaatcatacaattattatcaattcatgca 126  Q
    ||||||| ||||| ||| |||||||||||||||| |||||||||||||    
T  54583 aaacatgcaatttcacccacaatcatacaattatcatcaattcatgca 54630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1711 (Bit Score: 57; Significance: 9e-24; HSPs: 1)
Name: scaffold1711
Description:

Target: scaffold1711; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 44 - 164
Target Start/End: Complemental strand, 1424 - 1304
Alignment:
Q  44 gcacaattttcataacttttcattttcacatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaa 143  Q
    ||||||| |||||||||| |||||||  ||||| | |||||||||||| |||||||||||||||| ||  ||||||||||||||||||||||| |||||     
T  1424 gcacaatattcataacttatcatttttgcatatatgaacatgtaatttcaccaacaatcatacaactaacatcaattcatgcatacaaacataacatcac 1325  T
Q  144 agttgtagcacgaatttagca 164  Q
    ||    |||||||||||||||    
T  1324 agcaagagcacgaatttagca 1304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 55; Significance: 1e-22; HSPs: 3)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 230 - 308
Target Start/End: Complemental strand, 108107 - 108029
Alignment:
Q  230 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctt 308  Q
    ||||||||||||||||||||||||||||||||||||||||||||   | ||| |||||||||||| |||||||||||||    
T  108107 atgattatgataaagactaacccccttaccttagatgaagattaattccaacttaggcttcaattcagctcctaagctt 108029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 230 - 307
Target Start/End: Original strand, 55904 - 55981
Alignment:
Q  230 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagct 307  Q
    |||||||||||||||||||||||||||||||||||| |||||||  || ||  |||||||||||||||||||||||||    
T  55904 atgattatgataaagactaacccccttaccttagataaagattaatcccaatttaggcttcaatttagctcctaagct 55981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 150 - 263
Target Start/End: Complemental strand, 13378 - 13266
Alignment:
Q  150 agcacgaattt-agcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaaattgcaatgaatgaacatgattatgataaagacta 248  Q
    ||||||||||| | ||||||||||| ||||||||   ||||||||||||||||||  ||||| ||| |||||  | |||||||||||||||| |  ||||    
T  13378 agcacgaattttaacaacaattatcaattcattccaatcaacccatttcatacaa--catgagaaaatgcaaaaattgaacatgattatgatgataacta 13281  T
Q  249 acccccttaccttag 263  Q
    |||||||||||||||    
T  13280 acccccttaccttag 13266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 230 - 307
Target Start/End: Complemental strand, 13317 - 13240
Alignment:
Q  230 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagct 307  Q
    |||||||||||||||||||||||||||||||||||| |||||||  || ||| ||||||||| |||||||||||||||    
T  13317 atgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctcctaagct 13240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 230 - 307
Target Start/End: Complemental strand, 193429 - 193352
Alignment:
Q  230 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagct 307  Q
    ||||||||||||||||||||||||||||||||| ||||||||||  || ||| ||||||||| |||||||||||||||    
T  193429 atgattatgataaagactaacccccttaccttaaatgaagattaatcccaacttaggcttcactttagctcctaagct 193352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0467 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0467
Description:

Target: scaffold0467; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 79 - 308
Target Start/End: Complemental strand, 10428 - 10210
Alignment:
Q  79 aaacatgtaatttaaccaacaatcatacaattattatcaattcatgcatacaaacatatcatcaaagttgtagcacgaatttagcaacaattatccattc 178  Q
    ||||||||||||| ||| |||| ||||| || || ||||||||||||| |  || ||||||||| ||    ||||||||||||||||||||||| |||      
T  10428 aaacatgtaatttcacccacaaacataccataatcatcaattcatgcacaagaaaatatcatcacagcaagagcacgaatttagcaacaattattcat-- 10331  T
Q  179 attcatttcaacccattt-catacaaatcatgaaaaattgcaatgaatgaacatgattatgataaagactaacccccttaccttagatgaagattagacc 277  Q
            |||||||||| |||||||  ||||| ||| |||||  | |||||||||||||||  ||||| |||||||||||||||||||| |||||  ||    
T  10330 --------caacccattttcatacaa--catgagaaaatgcaaaaattgaacatgattatgaagaagacaaacccccttaccttagatgatgattaaccc 10241  T
Q  278 aaacctaggcttcaatttagctcctaagctt 308  Q
     ||| ||||||||| |||||||| |||||||    
T  10240 caacttaggcttcactttagctcataagctt 10210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 231 - 307
Target Start/End: Original strand, 25532 - 25608
Alignment:
Q  231 tgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagct 307  Q
    |||||||||| |||||||||||||||||||||||| | |||||  |||||| |||||||||||||||||||||||||    
T  25532 tgattatgatgaagactaacccccttaccttagataaggattaacccaaacttaggcttcaatttagctcctaagct 25608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 230 - 305
Target Start/End: Complemental strand, 17336 - 17261
Alignment:
Q  230 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaag 305  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||  || ||| |||||||||||||||||||||||    
T  17336 atgattatgataaagactaacccgcttaccttagatggagattaatcccaacttaggcttcaatttagctcctaag 17261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 45 - 126
Target Start/End: Original strand, 3854 - 3936
Alignment:
Q  45 cacaattttcataacttttcattttc-acatatttaaacatgtaatttaaccaacaatcatacaattattatcaattcatgca 126  Q
    |||||||| |||||||| |||||||  |||||||| |||||||||||| |||||||||||||||||||| |||||||||||||    
T  3854 cacaatttccataacttatcattttttacatatttgaacatgtaatttcaccaacaatcatacaattatcatcaattcatgca 3936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 231 - 305
Target Start/End: Original strand, 339 - 413
Alignment:
Q  231 tgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaag 305  Q
    |||||||||| |||||||||||||||||||||||| | |||||  |||||| |||||||||||||||||||||||    
T  339 tgattatgatgaagactaacccccttaccttagataaggattaatccaaacttaggcttcaatttagctcctaag 413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 230 - 307
Target Start/End: Complemental strand, 6475 - 6398
Alignment:
Q  230 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagct 307  Q
    |||||||||||||||||||||||||||||||||||| | || ||  || ||| |||||||||||||||||||||||||    
T  6475 atgattatgataaagactaacccccttaccttagataaggaataatcccaacttaggcttcaatttagctcctaagct 6398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 230 - 307
Target Start/End: Complemental strand, 57424 - 57347
Alignment:
Q  230 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagct 307  Q
    |||||||||||||||||||||||||||||||||||| |||||||  || ||| ||||||||| ||||||| |||||||    
T  57424 atgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctactaagct 57347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 107 - 160
Target Start/End: Complemental strand, 70361 - 70307
Alignment:
Q  107 aattattatcaatt-catgcatacaaacatatcatcaaagttgtagcacgaattt 160  Q
    |||||| ||||||| |||||||||||||||||||||| ||||| || ||||||||    
T  70361 aattatcatcaatttcatgcatacaaacatatcatcatagttggagtacgaattt 70307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0761 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0761
Description:

Target: scaffold0761; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 186 - 308
Target Start/End: Complemental strand, 1567 - 1446
Alignment:
Q  186 tcaacccattt-catacaaatcatgaaaaattgcaatgaatgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaaaccta 284  Q
    ||||||||||| |||||||  ||||| ||| |||||  | ||||||||||||||||||  |||||||||||||||||||| ||||||||  |||||||      
T  1567 tcaacccattttcatacaa--catgagaaaatgcaaaaattgaacatgattatgataataactaacccccttaccttagaagaagattaacccaaaccct 1470  T
Q  285 ggcttcaatttagctcctaagctt 308  Q
     ||||||||| |||||||||||||    
T  1469 tgcttcaattcagctcctaagctt 1446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 230 - 304
Target Start/End: Complemental strand, 34340 - 34266
Alignment:
Q  230 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaa 304  Q
    ||||||||||| |||||||||||||||||||||||| | |||||  |||||| ||||||||| ||||||||||||    
T  34340 atgattatgatgaagactaacccccttaccttagataatgattaatccaaacttaggcttcattttagctcctaa 34266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 230 - 307
Target Start/End: Complemental strand, 12450 - 12373
Alignment:
Q  230 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagct 307  Q
    |||||||||||||| ||||||||||||||||||||| ||||||   || ||| ||| |||||||||||||||||||||    
T  12450 atgattatgataaaaactaacccccttaccttagataaagattcatcccaacttagacttcaatttagctcctaagct 12373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 229 - 304
Target Start/End: Original strand, 95297 - 95372
Alignment:
Q  229 catgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaa 304  Q
    |||||||||||  |||||||||||||||||||||| | | |||||  |||||||||||||||| ||||||||||||    
T  95297 catgattatgaagaagactaacccccttaccttaggtaatgattaatccaaacctaggcttcactttagctcctaa 95372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 230 - 304
Target Start/End: Original strand, 18026 - 18100
Alignment:
Q  230 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaa 304  Q
    ||||||||||| |||||||||||||||||||||||| | |||||  |||||| ||||||||| |||| |||||||    
T  18026 atgattatgatgaagactaacccccttaccttagataatgattaatccaaacttaggcttcactttaactcctaa 18100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 158 - 304
Target Start/End: Complemental strand, 49856 - 49710
Alignment:
Q  158 tttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaaattgcaatgaatgaa--catgattatgataaagactaaccccct 255  Q
    |||| ||||||||||| ||||||||   ||||||||||||||||||  || | ||||||||||  ||   |  |||||||||||  ||||||||||||||    
T  49856 tttaacaacaattatcaattcattccaatcaacccatttcatacaa--caaggaaaattgcaaacaaaacaatcatgattatgaagaagactaaccccct 49759  T
Q  256 taccttagatgaagattagaccaaacctaggcttcaatttagctcctaa 304  Q
    |||||||| | | |||||  |||||| ||||||||| ||||||||||||    
T  49758 taccttaggtaatgattaatccaaacttaggcttcactttagctcctaa 49710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0173 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 229 - 304
Target Start/End: Original strand, 5548 - 5623
Alignment:
Q  229 catgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaa 304  Q
    |||||||||||| |||||||||||||||||||||| | | |||||  |||||| | ||||||| ||||||||||||    
T  5548 catgattatgatgaagactaacccccttaccttaggtaatgattaatccaaacttgggcttcattttagctcctaa 5623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 230 - 304
Target Start/End: Complemental strand, 5508 - 5434
Alignment:
Q  230 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaa 304  Q
    ||||||||||| |||||||||||||||||||||| | | |||||  |||| | ||||||||| ||||||||||||    
T  5508 atgattatgatgaagactaacccccttaccttaggtaatgattaatccaatcttaggcttcactttagctcctaa 5434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 228 - 303
Target Start/End: Original strand, 2698 - 2773
Alignment:
Q  228 acatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctccta 303  Q
    |||||||||||||||  |||||||||||||||||||| ||||||||  ||||||    ||||||||| ||||||||    
T  2698 acatgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctccta 2773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0303 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0303
Description:

Target: scaffold0303; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 230 - 304
Target Start/End: Complemental strand, 4378 - 4304
Alignment:
Q  230 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaa 304  Q
    ||||||||||||||| |||||||||||||||||| | | |||||  |||||| |  |||||| ||||||||||||    
T  4378 atgattatgataaagtctaacccccttaccttaggtaatgattaatccaaacttttgcttcactttagctcctaa 4304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0183 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 231 - 305
Target Start/End: Original strand, 6905 - 6979
Alignment:
Q  231 tgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaag 305  Q
    ||||||||||||  |||||||||||||||||||| ||||||||  ||||||    ||||||||| ||||||||||    
T  6905 tgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctcctaag 6979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1500 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold1500
Description:

Target: scaffold1500; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 228 - 273
Target Start/End: Complemental strand, 1465 - 1420
Alignment:
Q  228 acatgattatgataaagactaacccccttaccttagatgaagatta 273  Q
    |||||||||||||||  |||||||||||||||||||| ||||||||    
T  1465 acatgattatgataataactaacccccttaccttagaagaagatta 1420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 80 - 160
Target Start/End: Original strand, 8176 - 8257
Alignment:
Q  80 aacatgtaatttaaccaacaatcatacaattattatcaatt-catgcatacaaacatatcatcaaagttgtagcacgaattt 160  Q
    |||||| || || ||||||||  || ||||||| ||||||| |||||||||||||||||||||| ||||  |||||||||||    
T  8176 aacatgcaaattcaccaacaacaattcaattatcatcaatttcatgcatacaaacatatcatcatagttagagcacgaattt 8257  T

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Target: scaffold0034 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 262
Target Start/End: Original strand, 80187 - 80219
Alignment:
Q  230 atgattatgataaagactaacccccttacctta 262  Q
    |||||||||||||||||||||||||||||||||    
T  80187 atgattatgataaagactaacccccttacctta 80219  T

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Target: scaffold0409 (Bit Score: 32; Significance: 0.000000008; HSPs: 2)
Name: scaffold0409
Description:

Target: scaffold0409; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 63 - 160
Target Start/End: Complemental strand, 1447 - 1348
Alignment:
Q  63 tcattttcacata-tttaaacatgtaatttaaccaacaatcatacaattattatcaattc-atgcatacaaacatatcatcaaagttgtagcacgaattt 160  Q
    ||||||||||||| ||| | |||| ||||| ||||||||  || ||||||| | |||||  ||||||||||||||||||||| ||||  |||||||||||    
T  1447 tcattttcacatactttgaccatgcaatttcaccaacaacaatccaattatcaccaattttatgcatacaaacatatcatcatagttagagcacgaattt 1348  T

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Target: scaffold0409; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 63 - 160
Target Start/End: Complemental strand, 9702 - 9603
Alignment:
Q  63 tcattttcacata-tttaaacatgtaatttaaccaacaatcatacaattattatcaattc-atgcatacaaacatatcatcaaagttgtagcacgaattt 160  Q
    ||||||||||||| ||| | |||| ||||| ||||||||  || ||||||| | |||||  ||||||||||||||||||||| ||||  |||||||||||    
T  9702 tcattttcacatactttgaccatgcaatttcaccaacaacaatccaattatcaccaattttatgcatacaaacatatcatcatagttagagcacgaattt 9603  T

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Target: scaffold0367 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 194 - 264
Target Start/End: Complemental strand, 17278 - 17207
Alignment:
Q  194 tttcatacaaatcatgaaaaattgcaatgaatgaac-atgattatgataaagactaacccccttaccttaga 264  Q
    ||||||||||| || ||||||||||||  ||  ||  ||||||||||| |||||||||||||||||||||||    
T  17278 tttcatacaaaccaagaaaaattgcaaacaaacaattatgattatgatgaagactaacccccttaccttaga 17207  T

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Target: scaffold0191 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 226 - 273
Target Start/End: Complemental strand, 7409 - 7362
Alignment:
Q  226 gaacatgattatgataaagactaacccccttaccttagatgaagatta 273  Q
    |||||||||||||||||  ||||||||||||||||| || ||||||||    
T  7409 gaacatgattatgataataactaacccccttacctttgaagaagatta 7362  T

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Target: scaffold0516 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 304
Target Start/End: Complemental strand, 12075 - 12002
Alignment:
Q  231 tgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaa 304  Q
    ||||||||||||  ||||||||||||||||||||||| | |||     ||| ||||||||| ||||||||||||    
T  12075 tgattatgataataactaacccccttaccttagatgatgtttaattttaacttaggcttcactttagctcctaa 12002  T

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Target: scaffold0456 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 160
Target Start/End: Complemental strand, 1587 - 1546
Alignment:
Q  119 ttcatgcatacaaacatatcatcaaagttgtagcacgaattt 160  Q
    |||||||||||||||||||||||| ||||  |||||||||||    
T  1587 ttcatgcatacaaacatatcatcatagttagagcacgaattt 1546  T

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Target: scaffold0456; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 160
Target Start/End: Complemental strand, 8732 - 8691
Alignment:
Q  119 ttcatgcatacaaacatatcatcaaagttgtagcacgaattt 160  Q
    |||||||||||||||||||||||| ||||  |||||||||||    
T  8732 ttcatgcatacaaacatatcatcatagttagagcacgaattt 8691  T

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Target: scaffold0213 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 261
Target Start/End: Original strand, 29426 - 29500
Alignment:
Q  186 tcaacccattt-catacaaatcatgaaaaattgcaatgaatgaacatgattatgataaagactaacccccttacctt 261  Q
    ||||||||||| |||||||  ||||| ||| ||||| || || |||||||||||||||  |||||||||||||||||    
T  29426 tcaacccattttcatacaa--catgagaaaatgcaaagattgtacatgattatgataataactaacccccttacctt 29500  T

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Target: scaffold0483 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 80 - 159
Target Start/End: Original strand, 6827 - 6907
Alignment:
Q  80 aacatgtaatttaaccaacaatcatacaattattatcaa-ttcatgcatacaaacatatcatcaaagttgtagcacgaatt 159  Q
    |||||| ||||| ||||||||  || ||||||| | ||| ||||||||| |||||||||||||| | || |||||||||||    
T  6827 aacatgaaatttcaccaacaacaattcaattatcaacaacttcatgcattcaaacatatcatcataattatagcacgaatt 6907  T

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Target: scaffold0387 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 202
Target Start/End: Complemental strand, 7179 - 7127
Alignment:
Q  150 agcacgaatttagcaacaattatccattcattcatttcaacccatttcataca 202  Q
    ||||| |||||| ||||||||||| ||||||||   |||||||||||||||||    
T  7179 agcacaaatttaacaacaattatcaattcattccaatcaacccatttcataca 7127  T

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Target: scaffold0107 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 194 - 261
Target Start/End: Original strand, 31582 - 31647
Alignment:
Q  194 tttcatacaaatcatgaaaaattgcaatgaatgaacatgattatgataaagactaacccccttacctt 261  Q
    ||||||||||  ||||| ||| ||||| || || |||||||||||||||  |||||||||||||||||    
T  31582 tttcatacaa--catgagaaaatgcaaagattgtacatgattatgataataactaacccccttacctt 31647  T

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Target: scaffold0013 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 305
Target Start/End: Complemental strand, 154365 - 154305
Alignment:
Q  245 actaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaag 305  Q
    |||||||||||||||||||| ||||||||  ||||||    ||||||||| ||||||||||    
T  154365 actaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctcctaag 154305  T

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