View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1490_high_37 (Length: 266)
Name: NF1490_high_37
Description: NF1490
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1490_high_37 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 262; Significance: 1e-146; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 1 - 266
Target Start/End: Complemental strand, 34816541 - 34816276
Alignment:
| Q |
1 |
tgtactacggatgcaactaaaagaacatgcaaactaaggtgcaaccctgatagaggatattcccagcgtaaatatatgttgtttaatttggacagcaatt |
100 |
Q |
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| T |
34816541 |
tgtactacggatgcaactaaaagaacatgcaaactaaggtgcaaccctgatagaggatattcccagcgtaaatatatgttgtttaatttggacagcaatt |
34816442 |
T |
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| Q |
101 |
ggtgatccaaaacatcccaatatatatgttgctcgatctcttagatgatgttagtagaatatagatttttccggattttataagagttagaggacaattc |
200 |
Q |
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| T |
34816441 |
ggtgatccaaaacatcccaatatatatgttgctcgatctcttagatgatgttaatagaatatagatttttccggattttataagagttagaggacaattc |
34816342 |
T |
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| Q |
201 |
ttgaatgaagataactacttccaaccactatattcaagaatcttagtgtgccaacccaacccattc |
266 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34816341 |
ttgaatgaagataactacttccaaccactatattcaagaatcttagtgtgccaacccaacccattc |
34816276 |
T |
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