View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1490_high_41 (Length: 251)

Name: NF1490_high_41
Description: NF1490
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1490_high_41
NF1490_high_41
[»] chr6 (26 HSPs)
chr6 (14-251)||(26759653-26759889)
chr6 (14-251)||(26653685-26653920)
chr6 (22-150)||(34841791-34841920)
chr6 (15-234)||(24348776-24349004)
chr6 (22-251)||(34242722-34242940)
chr6 (37-150)||(8668765-8668878)
chr6 (15-73)||(18642553-18642611)
chr6 (88-251)||(8222496-8222650)
chr6 (88-244)||(30446648-30446794)
chr6 (88-150)||(635063-635125)
chr6 (88-150)||(6377108-6377170)
chr6 (88-150)||(17957976-17958038)
chr6 (47-150)||(10886580-10886683)
chr6 (175-251)||(10886699-10886775)
chr6 (175-235)||(12502374-12502434)
chr6 (88-150)||(34328781-34328843)
chr6 (88-147)||(2503726-2503785)
chr6 (88-150)||(198208-198269)
chr6 (175-225)||(8668903-8668953)
chr6 (88-150)||(12502292-12502353)
chr6 (175-233)||(12513484-12513542)
chr6 (88-150)||(29951703-29951764)
chr6 (175-220)||(8675164-8675209)
chr6 (175-220)||(34841946-34841991)
chr6 (88-150)||(6725300-6725362)
chr6 (15-51)||(12502207-12502243)
[»] chr4 (69 HSPs)
chr4 (17-251)||(35809700-35809933)
chr4 (14-251)||(19273221-19273455)
chr4 (14-251)||(27864211-27864450)
chr4 (17-251)||(13093700-13093925)
chr4 (14-251)||(48403439-48403667)
chr4 (22-150)||(3614876-3615005)
chr4 (15-150)||(17329530-17329669)
chr4 (15-150)||(33607315-33607450)
chr4 (15-150)||(18468981-18469118)
chr4 (17-150)||(23389600-23389733)
chr4 (22-234)||(38173856-38174064)
chr4 (15-236)||(53347242-53347452)
chr4 (46-234)||(8995094-8995282)
chr4 (15-150)||(16171519-16171658)
chr4 (15-150)||(45081107-45081242)
chr4 (15-73)||(4981968-4982026)
chr4 (88-234)||(3529803-3529947)
chr4 (175-236)||(33609421-33609482)
chr4 (175-251)||(31336069-31336145)
chr4 (175-251)||(33077397-33077473)
chr4 (175-251)||(52018112-52018188)
chr4 (175-234)||(34198801-34198860)
chr4 (175-234)||(40721474-40721533)
chr4 (175-245)||(28447685-28447755)
chr4 (88-150)||(56054630-56054692)
chr4 (175-236)||(33523843-33523904)
chr4 (182-251)||(34434082-34434151)
chr4 (182-234)||(18468908-18468960)
chr4 (46-150)||(33077485-33077589)
chr4 (17-73)||(33523705-33523761)
chr4 (47-150)||(16021181-16021284)
chr4 (88-150)||(34198885-34198947)
chr4 (46-148)||(34463168-34463270)
chr4 (88-150)||(53181109-53181171)
chr4 (175-251)||(23539204-23539280)
chr4 (175-251)||(52773355-52773431)
chr4 (175-235)||(56054710-56054770)
chr4 (175-234)||(16171446-16171505)
chr4 (175-234)||(23389515-23389574)
chr4 (88-150)||(31336161-31336221)
chr4 (175-234)||(55549602-55549661)
chr4 (88-150)||(2211973-2212035)
chr4 (88-150)||(21654480-21654541)
chr4 (88-150)||(28901499-28901560)
chr4 (88-150)||(40596391-40596453)
chr4 (88-150)||(46914167-46914229)
chr4 (46-150)||(55549679-55549784)
chr4 (175-235)||(28901577-28901637)
chr4 (175-235)||(48506143-48506203)
chr4 (88-147)||(48506227-48506284)
chr4 (175-226)||(3614800-3614851)
chr4 (175-234)||(34463086-34463145)
chr4 (89-148)||(40721393-40721452)
chr4 (88-150)||(13113913-13113975)
chr4 (175-251)||(13113991-13114064)
chr4 (182-220)||(17329470-17329508)
chr4 (88-150)||(28447607-28447669)
chr4 (89-150)||(31848429-31848491)
chr4 (175-220)||(4982121-4982166)
chr4 (89-150)||(19409864-19409925)
chr4 (89-150)||(34434174-34434234)
chr4 (88-150)||(27141837-27141900)
chr4 (88-150)||(47749704-47749767)
chr4 (88-150)||(39048680-39048742)
chr4 (15-52)||(23539408-23539445)
chr4 (15-52)||(52773188-52773225)
chr4 (22-54)||(52018020-52018052)
chr4 (88-144)||(52773273-52773329)
chr4 (88-148)||(55408196-55408256)
[»] chr8 (54 HSPs)
chr8 (14-251)||(26244934-26245170)
chr8 (16-251)||(40283914-40284147)
chr8 (15-251)||(23550048-23550286)
chr8 (15-150)||(29731989-29732124)
chr8 (15-150)||(1633048-1633181)
chr8 (15-122)||(13947769-13947876)
chr8 (15-150)||(13783815-13783954)
chr8 (17-78)||(44150207-44150268)
chr8 (22-150)||(1954873-1955007)
chr8 (175-251)||(13947900-13947976)
chr8 (175-236)||(44503732-44503793)
chr8 (175-251)||(15057050-15057126)
chr8 (15-238)||(31128999-31129213)
chr8 (175-234)||(44150349-44150408)
chr8 (88-150)||(42861078-42861140)
chr8 (175-227)||(43523822-43523874)
chr8 (175-234)||(29732149-29732208)
chr8 (88-150)||(13817432-13817494)
chr8 (175-233)||(30529203-30529261)
chr8 (22-64)||(30529362-30529404)
chr8 (15-150)||(44503569-44503710)
chr8 (88-234)||(45100568-45100713)
chr8 (88-148)||(4625156-4625216)
chr8 (175-251)||(13497732-13497808)
chr8 (46-150)||(35932196-35932300)
chr8 (175-234)||(35932324-35932383)
chr8 (175-234)||(38204819-38204878)
chr8 (48-150)||(231696-231798)
chr8 (48-150)||(708107-708209)
chr8 (48-150)||(745319-745421)
chr8 (48-150)||(869214-869316)
chr8 (88-150)||(5214178-5214240)
chr8 (88-150)||(8449663-8449725)
chr8 (88-150)||(30470448-30470510)
chr8 (88-150)||(42860305-42860367)
chr8 (175-220)||(1632979-1633024)
chr8 (175-235)||(7511306-7511366)
chr8 (95-150)||(38204896-38204952)
chr8 (91-150)||(13497655-13497714)
chr8 (175-234)||(13783738-13783797)
chr8 (88-150)||(26631783-26631844)
chr8 (88-150)||(26748589-26748650)
chr8 (88-150)||(34954962-34955024)
chr8 (175-234)||(42860386-42860447)
chr8 (175-220)||(1954812-1954857)
chr8 (88-147)||(12272093-12272150)
chr8 (88-148)||(36912949-36913009)
chr8 (88-150)||(5736403-5736463)
chr8 (88-150)||(17744960-17745019)
chr8 (88-150)||(18028972-18029035)
chr8 (175-233)||(12272010-12272068)
chr8 (88-150)||(43617856-43617918)
chr8 (93-150)||(17494206-17494263)
chr8 (90-150)||(30529274-30529333)
[»] chr5 (48 HSPs)
chr5 (14-251)||(13479120-13479360)
chr5 (14-251)||(39238851-39239087)
chr5 (15-251)||(4218954-4219181)
chr5 (15-251)||(25670344-25670571)
chr5 (17-232)||(23089843-23090057)
chr5 (22-150)||(27945936-27946064)
chr5 (15-150)||(27405814-27405949)
chr5 (17-251)||(3455139-3455363)
chr5 (22-150)||(32973015-32973144)
chr5 (175-251)||(9958149-9958225)
chr5 (22-150)||(40892106-40892236)
chr5 (15-251)||(42804323-42804549)
chr5 (15-148)||(32363088-32363222)
chr5 (15-234)||(39008815-39009031)
chr5 (22-234)||(7651290-7651502)
chr5 (46-150)||(42318224-42318328)
chr5 (175-234)||(19241777-19241836)
chr5 (175-250)||(30644576-30644651)
chr5 (88-150)||(4580390-4580452)
chr5 (88-150)||(31011707-31011769)
chr5 (175-236)||(32363004-32363065)
chr5 (46-150)||(31008030-31008134)
chr5 (175-234)||(29616031-29616090)
chr5 (89-249)||(36571931-36572090)
chr5 (88-148)||(9958065-9958125)
chr5 (88-148)||(21368635-21368695)
chr5 (23-251)||(4938405-4938623)
chr5 (88-150)||(25653205-25653267)
chr5 (88-150)||(29616112-29616174)
chr5 (88-150)||(41152504-41152566)
chr5 (182-251)||(13592448-13592517)
chr5 (175-232)||(27405739-27405796)
chr5 (175-235)||(14279289-14279349)
chr5 (175-251)||(31007928-31008004)
chr5 (88-147)||(25033569-25033628)
chr5 (175-234)||(42318353-42318412)
chr5 (88-150)||(8175997-8176059)
chr5 (88-150)||(23648691-23648752)
chr5 (88-150)||(23809820-23809881)
chr5 (176-234)||(34528960-34529018)
chr5 (175-220)||(27946082-27946127)
chr5 (175-220)||(32972944-32972989)
chr5 (175-220)||(40892253-40892298)
chr5 (91-150)||(19241692-19241752)
chr5 (88-150)||(30644667-30644727)
chr5 (182-223)||(15973062-15973103)
chr5 (182-251)||(23648594-23648663)
chr5 (182-251)||(23809909-23809978)
[»] chr7 (46 HSPs)
chr7 (14-251)||(45548921-45549154)
chr7 (17-251)||(38351923-38352152)
chr7 (15-251)||(39770034-39770263)
chr7 (15-251)||(20354565-20354795)
chr7 (15-148)||(37952084-37952217)
chr7 (15-150)||(26815431-26815566)
chr7 (15-150)||(32126881-32127016)
chr7 (15-150)||(32749259-32749394)
chr7 (15-148)||(114982-115116)
chr7 (22-150)||(36521811-36521941)
chr7 (15-150)||(40690631-40690769)
chr7 (175-234)||(33508156-33508215)
chr7 (46-234)||(28317627-28317814)
chr7 (175-234)||(42882058-42882117)
chr7 (175-234)||(47158958-47159017)
chr7 (15-73)||(38970356-38970414)
chr7 (25-73)||(43201644-43201692)
chr7 (88-150)||(30630264-30630326)
chr7 (175-240)||(115144-115209)
chr7 (89-150)||(48985265-48985326)
chr7 (175-227)||(22660330-22660382)
chr7 (46-150)||(42881943-42882047)
chr7 (175-234)||(26815590-26815649)
chr7 (175-234)||(32749409-32749468)
chr7 (185-248)||(33078338-33078401)
chr7 (175-234)||(37952243-37952302)
chr7 (175-234)||(40690795-40690854)
chr7 (88-150)||(22194613-22194675)
chr7 (88-150)||(37888220-37888282)
chr7 (176-249)||(30567075-30567148)
chr7 (88-148)||(33508235-33508293)
chr7 (182-251)||(37888304-37888373)
chr7 (46-150)||(40300560-40300666)
chr7 (175-234)||(43201484-43201543)
chr7 (88-150)||(5813659-5813721)
chr7 (88-150)||(30720500-30720561)
chr7 (175-234)||(30720584-30720645)
chr7 (88-150)||(33078433-33078495)
chr7 (88-150)||(37888761-37888822)
chr7 (88-150)||(47159038-47159100)
chr7 (175-220)||(36521967-36522012)
chr7 (175-251)||(38970508-38970584)
chr7 (88-150)||(35028448-35028511)
chr7 (89-150)||(33379667-33379726)
chr7 (88-150)||(43570771-43570833)
chr7 (89-150)||(24793818-24793878)
[»] chr3 (86 HSPs)
chr3 (14-251)||(51304865-51305102)
chr3 (14-251)||(36178011-36178245)
chr3 (15-251)||(51999601-51999831)
chr3 (15-236)||(12975137-12975353)
chr3 (15-236)||(48886376-48886594)
chr3 (15-150)||(35471942-35472079)
chr3 (15-232)||(11908344-11908556)
chr3 (22-150)||(30415088-30415217)
chr3 (15-150)||(31169894-31170028)
chr3 (15-150)||(49027043-49027181)
chr3 (22-251)||(6832927-6833157)
chr3 (15-150)||(26162166-26162301)
chr3 (15-148)||(46136902-46137034)
chr3 (22-150)||(27847896-27848029)
chr3 (15-150)||(50415435-50415571)
chr3 (22-251)||(29701970-29702200)
chr3 (46-150)||(50734355-50734459)
chr3 (46-150)||(50778396-50778500)
chr3 (46-234)||(6044875-6045063)
chr3 (175-251)||(33187638-33187714)
chr3 (88-150)||(4873784-4873846)
chr3 (88-150)||(25787386-25787448)
chr3 (88-150)||(25829343-25829405)
chr3 (88-150)||(33934873-33934935)
chr3 (88-150)||(42598041-42598103)
chr3 (15-73)||(43475723-43475781)
chr3 (182-251)||(4873696-4873765)
chr3 (182-234)||(10424205-10424257)
chr3 (175-251)||(42564413-42564489)
chr3 (175-238)||(20140025-20140088)
chr3 (175-234)||(32119980-32120039)
chr3 (88-150)||(25450111-25450173)
chr3 (88-150)||(32120065-32120127)
chr3 (15-73)||(35540273-35540331)
chr3 (88-150)||(38571774-38571836)
chr3 (176-234)||(41183730-41183788)
chr3 (88-150)||(44084690-44084752)
chr3 (48-150)||(49086477-49086579)
chr3 (15-73)||(49407028-49407086)
chr3 (88-150)||(51436008-51436070)
chr3 (15-150)||(33187737-33187874)
chr3 (46-150)||(51998866-51998971)
chr3 (46-150)||(20139896-20140000)
chr3 (175-246)||(15007656-15007727)
chr3 (182-233)||(31169823-31169874)
chr3 (175-234)||(35471869-35471928)
chr3 (175-234)||(37182620-37182679)
chr3 (175-234)||(44084776-44084835)
chr3 (88-150)||(4046502-4046564)
chr3 (88-150)||(5844649-5844711)
chr3 (88-150)||(7008499-7008560)
chr3 (88-150)||(17469797-17469859)
chr3 (88-150)||(41183652-41183713)
chr3 (46-148)||(42564285-42564387)
chr3 (88-150)||(47147654-47147716)
chr3 (88-150)||(49822576-49822637)
chr3 (182-251)||(7008585-7008654)
chr3 (175-220)||(26162104-26162149)
chr3 (175-220)||(49026983-49027028)
chr3 (175-220)||(50415364-50415409)
chr3 (175-251)||(35540099-35540175)
chr3 (175-251)||(38571681-38571757)
chr3 (88-148)||(42602251-42602311)
chr3 (175-251)||(43475881-43475957)
chr3 (88-147)||(55027144-55027201)
chr3 (175-235)||(55027225-55027285)
chr3 (175-234)||(50734485-50734544)
chr3 (175-234)||(50778311-50778370)
chr3 (175-234)||(51998786-51998845)
chr3 (88-150)||(49356916-49356978)
chr3 (175-220)||(30415017-30415062)
chr3 (175-240)||(46136818-46136883)
chr3 (175-251)||(4046587-4046663)
chr3 (88-148)||(10424284-10424343)
chr3 (175-251)||(49406864-49406940)
chr3 (91-150)||(15007581-15007640)
chr3 (88-149)||(43475799-43475862)
chr3 (88-150)||(28410775-28410837)
chr3 (88-150)||(30688532-30688594)
chr3 (88-150)||(35540195-35540256)
chr3 (88-150)||(35852869-35852931)
chr3 (88-150)||(37182696-37182757)
chr3 (88-150)||(43022984-43023046)
chr3 (176-234)||(46572504-46572562)
chr3 (175-220)||(27848052-27848097)
chr3 (88-148)||(33751694-33751754)
[»] chr2 (50 HSPs)
chr2 (18-249)||(7762724-7762942)
chr2 (15-150)||(1308310-1308444)
chr2 (22-150)||(7585161-7585290)
chr2 (15-234)||(17928748-17928970)
chr2 (15-150)||(36209089-36209225)
chr2 (15-150)||(4279400-4279535)
chr2 (183-251)||(17486269-17486337)
chr2 (15-79)||(17486149-17486213)
chr2 (46-234)||(22349445-22349633)
chr2 (175-234)||(39490592-39490651)
chr2 (46-150)||(44280457-44280561)
chr2 (175-234)||(43022151-43022210)
chr2 (15-73)||(5145082-5145140)
chr2 (88-150)||(12858272-12858334)
chr2 (88-150)||(30819295-30819357)
chr2 (175-228)||(1308236-1308289)
chr2 (46-150)||(14383310-14383415)
chr2 (14-150)||(6363696-6363831)
chr2 (88-150)||(1987525-1987587)
chr2 (23-73)||(13151288-13151338)
chr2 (88-150)||(43022075-43022137)
chr2 (175-236)||(5144918-5144979)
chr2 (48-150)||(926478-926581)
chr2 (175-234)||(14383441-14383500)
chr2 (175-234)||(36209023-36209082)
chr2 (175-234)||(36527282-36527341)
chr2 (175-234)||(44280575-44280634)
chr2 (88-150)||(4296280-4296342)
chr2 (88-150)||(8855380-8855442)
chr2 (88-150)||(9072598-9072660)
chr2 (23-73)||(14151944-14151994)
chr2 (88-150)||(36527203-36527265)
chr2 (88-147)||(1072694-1072751)
chr2 (88-147)||(9118207-9118264)
chr2 (175-235)||(9118288-9118348)
chr2 (175-235)||(13151160-13151220)
chr2 (88-150)||(5144998-5145059)
chr2 (88-150)||(37246035-37246097)
chr2 (89-150)||(39432391-39432450)
chr2 (175-240)||(6363843-6363908)
chr2 (175-220)||(7585090-7585135)
chr2 (88-148)||(36855036-36855095)
chr2 (91-150)||(31184915-31184974)
chr2 (91-150)||(31204641-31204700)
chr2 (88-150)||(43494896-43494956)
chr2 (175-233)||(1072612-1072670)
chr2 (15-56)||(6333012-6333053)
chr2 (88-137)||(13151222-13151271)
chr2 (175-220)||(14151823-14151868)
chr2 (90-150)||(2778775-2778834)
[»] scaffold1905 (3 HSPs)
scaffold1905 (15-251)||(965-1197)
scaffold1905 (175-251)||(387-463)
scaffold1905 (46-150)||(268-373)
[»] chr1 (55 HSPs)
chr1 (15-251)||(45363786-45364017)
chr1 (15-150)||(37822911-37823045)
chr1 (15-251)||(51156224-51156447)
chr1 (15-150)||(33167523-33167659)
chr1 (15-236)||(29524208-29524425)
chr1 (22-150)||(2474751-2474880)
chr1 (15-150)||(8471520-8471657)
chr1 (33-251)||(43739357-43739567)
chr1 (46-150)||(10265660-10265765)
chr1 (15-78)||(45455605-45455668)
chr1 (22-240)||(30878174-30878388)
chr1 (22-251)||(47297125-47297347)
chr1 (15-150)||(51523574-51523711)
chr1 (175-251)||(10265503-10265579)
chr1 (46-150)||(45623158-45623262)
chr1 (175-234)||(48384721-48384780)
chr1 (47-150)||(51494101-51494204)
chr1 (186-251)||(17675848-17675913)
chr1 (88-149)||(45242433-45242494)
chr1 (175-234)||(31159891-31159950)
chr1 (175-234)||(45455453-45455512)
chr1 (15-73)||(36231222-36231280)
chr1 (89-150)||(643479-643540)
chr1 (89-150)||(17675973-17676033)
chr1 (46-147)||(29919708-29919809)
chr1 (175-251)||(8471676-8471752)
chr1 (175-251)||(36231384-36231460)
chr1 (175-234)||(37823068-37823127)
chr1 (175-234)||(45623074-45623133)
chr1 (88-150)||(19578540-19578601)
chr1 (88-150)||(27629969-27630031)
chr1 (88-150)||(31471569-31471631)
chr1 (88-150)||(36231305-36231367)
chr1 (88-150)||(37419853-37419915)
chr1 (175-236)||(33167678-33167739)
chr1 (46-147)||(48384809-48384910)
chr1 (175-226)||(2474675-2474726)
chr1 (175-234)||(14097157-14097216)
chr1 (175-234)||(29919830-29919889)
chr1 (175-234)||(37690841-37690900)
chr1 (46-150)||(37690924-37691026)
chr1 (175-234)||(51494016-51494075)
chr1 (88-150)||(17786627-17786689)
chr1 (175-220)||(19578478-19578523)
chr1 (89-150)||(48729816-48729876)
chr1 (175-240)||(51523721-51523786)
chr1 (175-211)||(17675915-17675951)
chr1 (88-148)||(38212736-38212796)
chr1 (91-150)||(37646067-37646125)
chr1 (176-234)||(3754598-3754656)
chr1 (88-150)||(8464948-8465009)
chr1 (46-150)||(31159772-31159871)
chr1 (88-150)||(52930322-52930383)
chr1 (15-52)||(31159730-31159767)
chr1 (15-52)||(48407667-48407704)
[»] scaffold0021 (2 HSPs)
scaffold0021 (175-251)||(109756-109832)
scaffold0021 (88-150)||(109845-109907)
[»] scaffold1454 (1 HSPs)
scaffold1454 (15-73)||(577-635)
[»] scaffold0004 (2 HSPs)
scaffold0004 (15-127)||(106142-106254)
scaffold0004 (175-234)||(106298-106357)
[»] scaffold1183 (1 HSPs)
scaffold1183 (88-238)||(26-176)
[»] scaffold0015 (1 HSPs)
scaffold0015 (175-234)||(83463-83522)
[»] scaffold0758 (1 HSPs)
scaffold0758 (88-150)||(6348-6409)


Alignment Details
Target: chr6 (Bit Score: 122; Significance: 1e-62; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 14 - 251
Target Start/End: Complemental strand, 26759889 - 26759653
Alignment:
Q  14 tactaaacaaagactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaattttgannnnnnnnctgtgtccaaatcaaatgatccaaga 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||        |||||||||||||||||||||||||     
T  26759889 tactaaacaaagactaaaacttcaaaagaaatgctaataataagattaagagagtgaaaaatttgattttttttctgtgtccaaatcaaatgatccaagt 26759790  T
Q  114 ttctatttgtagaggaaaaaaaa-tcacgaattttggtnnnnnnnnnttaaannnnnnnnnnatttgctatgaaataattgagtccaaattattaagaaa 212  Q
    |||||||||||||| |||||||| ||||||||||||||         ||||           ||||||||||||||||||||||||||||||||||||||    
T  26759789 ttctatttgtagagaaaaaaaaaatcacgaattttggtaaaaaaaaattaa--tttttttttatttgctatgaaataattgagtccaaattattaagaaa 26759692  T
Q  213 ataaaaattcaagcagccaatcgtaacaagccacgtgtc 251  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  26759691 ataaaaatccaagcagccaatcgtaacaagccacgtgtc 26759653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 14 - 251
Target Start/End: Complemental strand, 26653920 - 26653685
Alignment:
Q  14 tactaaacaaagactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaattttgannnnnnnnctgtgtccaaatcaaatgatccaaga 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||        |||||||||||||||||||||||||     
T  26653920 tactaaacaaagactaaaacttcaaaagaaatgctaataataagattaagagagtgaaaaatttgattttttttctgtgtccaaatcaaatgatccaagt 26653821  T
Q  114 ttctatttgtagaggaaaaaaaa-tcacgaattttggtnnnnnnnnnttaaannnnnnnnnnatttgctatgaaataattgagtccaaattattaagaaa 212  Q
    |||||||||||||| |||||||| ||||||||||||||         ||||           ||||||||||||||||||||||||||||||||||||||    
T  26653820 ttctatttgtagagaaaaaaaaaatcacgaattttggtaaaaaaaa-ttaa--tttttttttatttgctatgaaataattgagtccaaattattaagaaa 26653724  T
Q  213 ataaaaattcaagcagccaatcgtaacaagccacgtgtc 251  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  26653723 ataaaaatccaagcagccaatcgtaacaagccacgtgtc 26653685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 22 - 150
Target Start/End: Original strand, 34841791 - 34841920
Alignment:
Q  22 aaagactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaattttgannnnnnnn-ctgtgtccaaatcaaatgatccaagattctatt 120  Q
    |||||||||||||||||||||||| |||||||||||||||||| |||||||||| ||          |||||||||||||||||||||||||  ||||||    
T  34841791 aaagactaaaacttcaaaagaaattctaataataagattaagagagtgaaaattatggtttttttttctgtgtccaaatcaaatgatccaagtctctatt 34841890  T
Q  121 tgtagaggaaaaaaaatcacgaattttggt 150  Q
    | ||||| ||||||||||||||||||||||    
T  34841891 tatagagaaaaaaaaatcacgaattttggt 34841920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 15 - 234
Target Start/End: Original strand, 24348776 - 24349004
Alignment:
Q  15 actaaacaaagactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaa----------ttttgannnnnnnnctgtgtccaaatcaaat 104  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||          ||||          |||||||||||||||||    
T  24348776 actaaacaaagactaaaacttcaaaagaaatgctaataataagattaagagagtgaaaaattggtttttttttttttttttttctgtgtccaaatcaaat 24348875  T
Q  105 gatccaagattctatttgtagaggaaaaaaaatcacgaattttggtnnnnnnnnnttaaannnnnnnnnnatttgctatgaaataattgagtccaaatta 204  Q
    ||||||||  ||||||||||||| ||||||||||||||||||||||          ||||          |||||| ||||||||||||| |||||||||    
T  24348876 gatccaagtctctatttgtagagaaaaaaaaatcacgaattttggtaaaaaaaaaataaa-aataaaaatatttgcaatgaaataattgaatccaaatta 24348974  T
Q  205 ttaagaaaataaaaattcaagcagccaatc 234  Q
    ||||||| |||||||| |||||||||||||    
T  24348975 ttaagaagataaaaatccaagcagccaatc 24349004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 22 - 251
Target Start/End: Original strand, 34242722 - 34242940
Alignment:
Q  22 aaagactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaattttgannnnnnnn-ctgtgtccaaatcaaatgatccaagattctatt 120  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||| ||||          ||||||||||||||||||||||||   ||||||    
T  34242722 aaagactaaaacttcaaaagaaaagctaataataagattaagagagtgaaaaatttggtttttttttctgtgtccaaatcaaatgatccaaatctctatt 34242821  T
Q  121 tgtagaggaaaaaaaatcacgaattttggtnnnnnnnnnttaaannnnnnnnnnatttgctatgaaataattgagtccaaattattaagaaaataaaaat 220  Q
    ||||||   |||||||||||||||||||||           |||          |||||| ||||||||||| |||||||||||||||||| ||||||||    
T  34242822 tgtagat--aaaaaaatcacgaattttggtaa---------aaaaaaaaaaaatatttgcaatgaaataatt-agtccaaattattaagaagataaaaat 34242909  T
Q  221 tcaagcagccaatcgtaacaagccacgtgtc 251  Q
     ||||||| ||||||||||| ||||||||||    
T  34242910 ccaagcagtcaatcgtaacatgccacgtgtc 34242940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 37 - 150
Target Start/End: Original strand, 8668765 - 8668878
Alignment:
Q  37 aaaagaaatgctaataataagattaagatagtgaaaattttgannnnnnnn-ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaa 135  Q
    |||||||||||||||||||||||||||| |||||||||| ||          |||||||||||||||||||||||||  ||||||| |||| ||||||||    
T  8668765 aaaagaaatgctaataataagattaagagagtgaaaattatggtttttttttctgtgtccaaatcaaatgatccaagtctctatttataga-gaaaaaaa 8668863  T
Q  136 atcacgaattttggt 150  Q
    |||||||||||||||    
T  8668864 atcacgaattttggt 8668878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 15 - 73
Target Start/End: Original strand, 18642553 - 18642611
Alignment:
Q  15 actaaacaaagactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaa 73  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||    
T  18642553 actaaacaaagactaaaacttcaaaagaaatgctaataataagatcaagagagtgaaaa 18642611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 88 - 251
Target Start/End: Original strand, 8222496 - 8222650
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggtnnnnnnnnnttaaannnnnnnnnnatttgctatgaaa 187  Q
    |||||||||||||||||||||||||  ||||||| ||||| ||||||||||||||||||||||           |||          |||| | ||||||    
T  8222496 ctgtgtccaaatcaaatgatccaagtatctatttatagagaaaaaaaaatcacgaattttggtaa---------aaaaaataacaatattttcaatgaaa 8222586  T
Q  188 taattgagtccaaattattaagaaaataaaaattcaagcagccaatcgtaacaagccacgtgtc 251  Q
    |||||||||||||| ||||||||  ||||||||||||||||||||||| |||| ||||| ||||    
T  8222587 taattgagtccaaaatattaagatgataaaaattcaagcagccaatcgaaacacgccacatgtc 8222650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 88 - 244
Target Start/End: Original strand, 30446648 - 30446794
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggtnnnnnnnnnttaaannnnnnnnnnatttgctatgaaa 187  Q
    ||||||| |||||||||||||||||  ||||||| ||||| ||||||||||||||||||||||          ||||          |||||| ||||||    
T  30446648 ctgtgtcaaaatcaaatgatccaagtctctatttatagagaaaaaaaaatcacgaattttggt----------taaaaaaaaaatgtatttgcaatgaaa 30446737  T
Q  188 taattgagtccaaattattaagaaaataaaaattcaagcagccaatcgtaacaagcc 244  Q
    |||||||||||||| ||||||||  ||||||||||||||||||||||| ||| ||||    
T  30446738 taattgagtccaaaatattaagatgataaaaattcaagcagccaatcgaaaccagcc 30446794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 88 - 150
Target Start/End: Original strand, 635063 - 635125
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    |||||||||||||||||||||||||  ||||||| ||||||||||||||||| ||||||||||    
T  635063 ctgtgtccaaatcaaatgatccaagtctctatttatagaggaaaaaaaatcatgaattttggt 635125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 88 - 150
Target Start/End: Complemental strand, 6377170 - 6377108
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    |||||||||||||||||||||||||  ||||||| ||||||||||||||||| ||||||||||    
T  6377170 ctgtgtccaaatcaaatgatccaagtctctatttatagaggaaaaaaaatcatgaattttggt 6377108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 88 - 150
Target Start/End: Complemental strand, 17958038 - 17957976
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    |||||||||||||||||||||||||  ||||||| ||||||||||||||||| ||||||||||    
T  17958038 ctgtgtccaaatcaaatgatccaagtctctatttatagaggaaaaaaaatcatgaattttggt 17957976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 47 - 150
Target Start/End: Original strand, 10886580 - 10886683
Alignment:
Q  47 ctaataataagattaagatagtgaaaattttgannnnnnnnctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattt 146  Q
    |||||||||||||||||| ||||||||  || |        |||||||||||||||||||||||||  ||||||| ||||| ||||||||| ||||||||    
T  10886580 ctaataataagattaagagagtgaaaaacttaattttttttctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaaattacgaattt 10886679  T
Q  147 tggt 150  Q
    ||||    
T  10886680 tggt 10886683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 175 - 251
Target Start/End: Original strand, 10886699 - 10886775
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatcgtaacaagccacgtgtc 251  Q
    |||||| |||||||||||| ||||||||||||||||| |||| ||| |||||||||||||  |||| |||| |||||    
T  10886699 atttgcaatgaaataattgggtccaaattattaagaagataacaatccaagcagccaatcaaaacatgccatgtgtc 10886775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 175 - 235
Target Start/End: Original strand, 12502374 - 12502434
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatcg 235  Q
    |||||| |||||||||||||||||||||||||||||| | |||||| |||||| |||||||    
T  12502374 atttgcaatgaaataattgagtccaaattattaagaataaaaaaatccaagcaaccaatcg 12502434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 88 - 150
Target Start/End: Original strand, 34328781 - 34328843
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    ||||||||||||||||||| |||||  ||||||| ||||| ||||||||||| ||||||||||    
T  34328781 ctgtgtccaaatcaaatgaaccaagtctctatttatagagaaaaaaaaatcatgaattttggt 34328843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 88 - 147
Target Start/End: Original strand, 2503726 - 2503785
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaatttt 147  Q
    ||||||||||||||||||| |||||  ||||||| ||||| ||||||||||| |||||||    
T  2503726 ctgtgtccaaatcaaatgaaccaagtctctatttatagagaaaaaaaaatcatgaatttt 2503785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 88 - 150
Target Start/End: Original strand, 198208 - 198269
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    ||||||||||||||||||| |||||  ||||||| |||| |||||||||||| ||||||||||    
T  198208 ctgtgtccaaatcaaatgaaccaagtctctatttataga-gaaaaaaaatcatgaattttggt 198269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 175 - 225
Target Start/End: Original strand, 8668903 - 8668953
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaag 225  Q
    |||||| |||||||||||||||||||| ||||||||| |||||||| ||||    
T  8668903 atttgcaatgaaataattgagtccaaagtattaagaagataaaaatccaag 8668953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 88 - 150
Target Start/End: Original strand, 12502292 - 12502353
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    |||||||||||||||||||| ||||  ||||||| |||| |||||||||||||||| ||||||    
T  12502292 ctgtgtccaaatcaaatgattcaagtctctatttataga-gaaaaaaaatcacgaactttggt 12502353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 175 - 233
Target Start/End: Original strand, 12513484 - 12513542
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaat 233  Q
    |||||| |||||||||||||||| ||| ||||||||| | |||||| ||||||||||||    
T  12513484 atttgcaatgaaataattgagtctaaaatattaagaagaaaaaaatccaagcagccaat 12513542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 88 - 150
Target Start/End: Complemental strand, 29951764 - 29951703
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    ||||||||||||||||||||| |||  ||||||| |||| |||||||||||| ||||||||||    
T  29951764 ctgtgtccaaatcaaatgatctaagtctctatttataga-gaaaaaaaatcatgaattttggt 29951703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 175 - 220
Target Start/End: Original strand, 8675164 - 8675209
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaat 220  Q
    |||||| ||||||||||||||||||||||||||| || ||||||||    
T  8675164 atttgcaatgaaataattgagtccaaattattaaaaagataaaaat 8675209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 175 - 220
Target Start/End: Original strand, 34841946 - 34841991
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaat 220  Q
    |||||| |||||||||||||||||||| ||||||||| ||||||||    
T  34841946 atttgcaatgaaataattgagtccaaagtattaagaagataaaaat 34841991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 150
Target Start/End: Complemental strand, 6725362 - 6725300
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    ||||||||||||||||||| |||||  ||||||| ||||  ||| ||||||| ||||||||||    
T  6725362 ctgtgtccaaatcaaatgaaccaagtctctatttatagacaaaataaaatcatgaattttggt 6725300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 51
Target Start/End: Original strand, 12502207 - 12502243
Alignment:
Q  15 actaaacaaagactaaaacttcaaaagaaatgctaat 51  Q
    |||||| ||||||||||||||||||||||| ||||||    
T  12502207 actaaataaagactaaaacttcaaaagaaaagctaat 12502243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 118; Significance: 3e-60; HSPs: 69)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 17 - 251
Target Start/End: Original strand, 35809700 - 35809933
Alignment:
Q  17 taaacaaagactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaattttgannnnnnnnctgtgtccaaatcaaatgatccaagattc 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||        ||||||||||||||||||||||||| |||    
T  35809700 taaacaaagactaaaacttcaaaagaaatgctaataataagattaagagagtgaaaaatttgattttttttctgtgtccaaatcaaatgatccaagtttc 35809799  T
Q  117 tatttgtagaggaaaaaaaatcacgaattttggtnnnnnnnnnttaaannnnnnnnnnatttgctatgaaataattgagtccaaattattaagaaaataa 216  Q
    ||||||||||| ||||||||||||||||||||||            ||          ||||||||||||||||||||||||||||||||||||||||||    
T  35809800 tatttgtagag-aaaaaaaatcacgaattttggtaaaaaaataaataattttttttttatttgctatgaaataattgagtccaaattattaagaaaataa 35809898  T
Q  217 aaattcaagcagccaatcgtaacaagccacgtgtc 251  Q
    |||| ||||||||||||||||||||||||||||||    
T  35809899 aaatccaagcagccaatcgtaacaagccacgtgtc 35809933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 14 - 251
Target Start/End: Original strand, 19273221 - 19273455
Alignment:
Q  14 tactaaacaaagactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaattttgannnnnnnnctgtgtccaaatcaaatgatccaaga 113  Q
    ||||||||||| |||||||||||||||||||||| |||||||||||||||| |||||||| |||||        |||||||||||||||||||||||||     
T  19273221 tactaaacaaaaactaaaacttcaaaagaaatgcaaataataagattaagagagtgaaaaatttgatttttattctgtgtccaaatcaaatgatccaagt 19273320  T
Q  114 ttctatttgtagaggaaaaaaaatcacgaattttggtnnnnnnnnnttaaannnnnnnnnnatttgctatgaaataattgagtccaaattattaagaaaa 213  Q
    |||||||||||||| ||||||||||||||||||||||         |   |          |||||||||||||||||||||||||||||||||||||||    
T  19273321 ttctatttgtagagaaaaaaaaatcacgaattttggtaaaaaaaaat---aatttttttttatttgctatgaaataattgagtccaaattattaagaaaa 19273417  T
Q  214 taaaaattcaagcagccaatcgtaacaagccacgtgtc 251  Q
    ||||||| |||||||||||||||||||| |||||||||    
T  19273418 taaaaatccaagcagccaatcgtaacaaaccacgtgtc 19273455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 14 - 251
Target Start/End: Original strand, 27864211 - 27864450
Alignment:
Q  14 tactaaacaaagactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaattttgannnnnnnnctgtgtccaaatcaaatgatccaaga 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||         ||||||||||||||||||||||||     
T  27864211 tactaaacaaagactaaaacttcaaaagaaatgctaataataagattaagagagtgaaaaatttgattttttttgtgtgtccaaatcaaatgatccaagt 27864310  T
Q  114 ttctatttgtagag-gaaaaaaaatcacgaattttggtnnnnnnnnntta-aannnnnnnnnnatttgctatgaaataattgagtccaaattattaagaa 211  Q
    |||||||||||||| || ||||||||||||||||||||           | ||          |||||||||||||||||||||||||||||||||||||    
T  27864311 ttctatttgtagagagagaaaaaatcacgaattttggtaaaaaacaaaaataattttttttttatttgctatgaaataattgagtccaaattattaagaa 27864410  T
Q  212 aataaaaattcaagcagccaatcgtaacaagccacgtgtc 251  Q
    ||||||||||||||||||||||||||||||| || |||||    
T  27864411 aataaaaattcaagcagccaatcgtaacaagtcatgtgtc 27864450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 17 - 251
Target Start/End: Complemental strand, 13093925 - 13093700
Alignment:
Q  17 taaacaaagactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaattttgannnnnnnnctgtgtccaaatcaaatgatccaagattc 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||        ||||||||||||||||||||||||  |||    
T  13093925 taaacaaagactaaaacttcaaaagaaatgctaataataagattaagagagtgaaaaatttgattttttt-ctgtgtccaaatcaaatgatccaaatttc 13093827  T
Q  117 tatttgtagaggaaaaaaaatcacgaattttggtnnnnnnnnnttaaannnnnnnnnnatttgctatgaaataattgagtccaaattattaagaaaataa 216  Q
    |||||||||||  |||||||||||||||||||||         ||             |||||||||||||||||||| |||||||||||||||||||||    
T  13093826 tatttgtagag--aaaaaaatcacgaattttggtaaatttttttt------tttttttatttgctatgaaataattgaatccaaattattaagaaaataa 13093735  T
Q  217 aaattcaagcagccaatcgtaacaagccacgtgtc 251  Q
    |||| ||| ||||||||||||||||||||||||||    
T  13093734 aaatccaaacagccaatcgtaacaagccacgtgtc 13093700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 14 - 251
Target Start/End: Complemental strand, 48403667 - 48403439
Alignment:
Q  14 tactaaacaaagactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaattttgannnnnnnnctgtgtccaaatcaaatgatccaaga 113  Q
    ||||||||| |||||||||||||||||||||| |||||||||| ||||||| |||| ||| ||||          ||||||||||||||||||| ||||     
T  48403667 tactaaacagagactaaaacttcaaaagaaatactaataataaaattaagagagtgtaaaatttgtttttttt--tgtgtccaaatcaaatgattcaagt 48403570  T
Q  114 ttctatttgtagag-gaaaaaaaatcacgaattttggtnnnnnnnnnttaaannnnnnnnnnatttgctatgaaataattgagtccaaattattaagaaa 212  Q
     ||||||| || || |||||||||||||||||||||||           |||          |||||||||||||||||||||||||||||||||||||     
T  48403569 ctctatttataaagagaaaaaaaatcacgaattttggtaaa--------aaaataaaaaattatttgctatgaaataattgagtccaaattattaagaag 48403478  T
Q  213 ataaaaattcaagcagccaatcgtaacaagccacgtgtc 251  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  48403477 ataaaaatccaagcagccaatcgtaacaagccacgtgtc 48403439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 22 - 150
Target Start/End: Complemental strand, 3615005 - 3614876
Alignment:
Q  22 aaagactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaatt-ttgannnnnnnnctgtgtccaaatcaaatgatccaagattctatt 120  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||| | |         |||||||||||||||||||||||||  ||||||    
T  3615005 aaagactaaaacttcaaaagaaatgctaataataagattaagagagtgaaaattatggtttttttttctgtgtccaaatcaaatgatccaagtctctatt 3614906  T
Q  121 tgtagaggaaaaaaaatcacgaattttggt 150  Q
    | ||||| ||||||||||||||||||||||    
T  3614905 tatagagaaaaaaaaatcacgaattttggt 3614876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 15 - 150
Target Start/End: Complemental strand, 17329669 - 17329530
Alignment:
Q  15 actaaacaaagactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaattttg---annnnnnnnctgtgtccaaatcaaatgatccaa 111  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||            | ||||||||||||||||||||||    
T  17329669 actaaacaaagactaaaacttcaaaagaaatgctaataataagattaagagagtgaaaaatttggtttttttttttccgtgtccaaatcaaatgatccaa 17329570  T
Q  112 gattctatttgtagag-gaaaaaaaatcacgaattttggt 150  Q
    |  ||||||||||||| |||||||||||||||||||||||    
T  17329569 gtctctatttgtagagagaaaaaaaatcacgaattttggt 17329530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 15 - 150
Target Start/End: Original strand, 33607315 - 33607450
Alignment:
Q  15 actaaacaaagactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaattttgannnnnnnnctgtgtccaaatcaaatgatccaagat 114  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||  |||         ||||||||||||||||||||| |||      
T  33607315 actaaacaaagactaaaacttcaaaagaaatgcttttaataagattaagatagtgaaaaacttgtttttttttctgtgtccaaatcaaatgatcaaagtc 33607414  T
Q  115 tctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    ||||||| |||||  |||||||||||||||||||||    
T  33607415 tctatttatagagagaaaaaaatcacgaattttggt 33607450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 15 - 150
Target Start/End: Complemental strand, 18469118 - 18468981
Alignment:
Q  15 actaaacaaagactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaattttga--nnnnnnnnctgtgtccaaatcaaatgatccaag 112  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| | |||          |||||||||||||||||||||||||    
T  18469118 actaaacaaagactaaaactttaaaagaaatgctaataataagattaagagagtgaaaaatatgattttttttttctgtgtccaaatcaaatgatccaag 18469019  T
Q  113 attctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
      |||||| |||||| |||||||||||| |||||||||    
T  18469018 tctctattagtagagaaaaaaaaatcacaaattttggt 18468981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 17 - 150
Target Start/End: Complemental strand, 23389733 - 23389600
Alignment:
Q  17 taaacaaagactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaatttt-gannnnnnnnctgtgtccaaatcaaatgatccaagatt 115  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||| |||||||||||| |         |||||||||||||||||||||||||  |    
T  23389733 taaacaaagactaaaacttcaaaagaaactctaataataagattaagagagtgaaaattttggtttttttttctgtgtccaaatcaaatgatccaagtct 23389634  T
Q  116 ctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    ||||||||||| ||||||||||||| |||||||||    
T  23389633 ctatttgtaga-gaaaaaaaatcacaaattttggt 23389600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 22 - 234
Target Start/End: Original strand, 38173856 - 38174064
Alignment:
Q  22 aaagactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaattttgannnnnnnnctgtgtccaaatcaaatgatccaagattctattt 121  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||||||  ||||        |||||||||||||||||||||||||  |||||||    
T  38173856 aaagactaaaacttcaaaagaaaagctaataataagattaagagagtgaaaaacttgattttttttctgtgtccaaatcaaatgatccaagtctctattt 38173955  T
Q  122 gtagaggaaaaaaaatcacgaattttggtnnnnnnnnnttaaannnnnnnnnnatttgctatgaaataattgagtccaaattattaagaaaataaaaatt 221  Q
     ||||  ||||||||| ||||||||||||          ||||          |||||| |||||||||||||||||||||||||||||| ||||||||     
T  38173956 ataga--aaaaaaaattacgaattttggtaaaaaaaa--taaaaataaaaattatttgcaatgaaataattgagtccaaattattaagaagataaaaatc 38174051  T
Q  222 caagcagccaatc 234  Q
    ||||||| |||||    
T  38174052 caagcagtcaatc 38174064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 15 - 236
Target Start/End: Complemental strand, 53347452 - 53347242
Alignment:
Q  15 actaaacaaagactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaattttgannnnnnnn--ctgtgtccaaatcaaatgatccaag 112  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||  |||           |||||||||||||||||||||||||    
T  53347452 actaaataaagactaaaacttcaaaagaaatgctaataataagattaagagagtgaaaaacttggttttttttttctgtgtccaaatcaaatgatccaag 53347353  T
Q  113 attctatttgtagaggaaaaaaaatcacgaattttggtnnnnnnnnnttaaannnnnnnnnnatttgctatgaaataattgagtccaaattattaagaaa 212  Q
      |||||||||| |   |||||| ||||||||||||||           |||          |||||| ||||||||||||||||||||||||||||||     
T  53347352 tctctatttgtaca---aaaaaattcacgaattttggta----------aaaaaaataaattatttgcaatgaaataattgagtccaaattattaagaag 53347266  T
Q  213 ataaaaattcaagcagccaatcgt 236  Q
    ||||||||||||||||||||||||    
T  53347265 ataaaaattcaagcagccaatcgt 53347242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 46 - 234
Target Start/End: Original strand, 8995094 - 8995282
Alignment:
Q  46 gctaataataagattaagatagtgaaaattttgannnnnnnnctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaatt 145  Q
    |||||| |||||||||||| ||||||||  ||||        |||||||||||||||||||||||||  ||||||| ||||| ||||||||| |||||||    
T  8995094 gctaatgataagattaagagagtgaaaaacttgattttttttctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaaattacgaatt 8995193  T
Q  146 ttggtnnnnnnnnnttaaannnnnnnnnnatttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatc 234  Q
    |||||          ||||          |||||| |||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  8995194 ttggtaaaaaaaaaataaaaaaaaaaattatttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatc 8995282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 15 - 150
Target Start/End: Complemental strand, 16171658 - 16171519
Alignment:
Q  15 actaaacaaagactaaaacttcaaaagaaatgctaa-taataagattaagatagtgaaaattttgannnnnnnn---ctgtgtccaaatcaaatgatcca 110  Q
    |||||| ||| ||||||||||||||||||||||||| |||||||||||||| |||||||||| ||            |||||||||||||||||||||||    
T  16171658 actaaataaatactaaaacttcaaaagaaatgctaaataataagattaagagagtgaaaattatggtttttttttttctgtgtccaaatcaaatgatcca 16171559  T
Q  111 agattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    ||  ||||||| ||||| ||||||||||| ||||||||||    
T  16171558 agtctctatttatagagaaaaaaaaatcatgaattttggt 16171519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 15 - 150
Target Start/End: Complemental strand, 45081242 - 45081107
Alignment:
Q  15 actaaacaaagactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaattttga--nnnnnnnnctgtgtccaaatcaaatgatccaag 112  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||| |||||||| | |||          ||||||||||||||||||||| |||    
T  45081242 actaaacaaagactaaaacttcaaaagaattgctaattataagattaagagagtgaaaaatatgattttttttttctgtgtccaaatcaaatgatcaaag 45081143  T
Q  113 attctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
      ||||||| |||||  |||||||| ||||||||||||    
T  45081142 tctctatttatagag--aaaaaaattacgaattttggt 45081107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 15 - 73
Target Start/End: Original strand, 4981968 - 4982026
Alignment:
Q  15 actaaacaaagactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaa 73  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  4981968 actaaacaaagactaaaacttcaaaagaaatgctaattataagattaagagagtgaaaa 4982026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 88 - 234
Target Start/End: Complemental strand, 3529947 - 3529803
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggtnnnnnnnnnttaaannnnnnnnnnatttgctatgaaa 187  Q
    |||||||||||||||||||||||||  ||||||| ||||| ||||||||| ||||||||||||          ||||          |||||| ||||||    
T  3529947 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaaattacgaattttggtaaaaaaaa--taaaataaaaaattatttgcaatgaaa 3529850  T
Q  188 taattgagtccaaattattaagaaaataaaaattcaagcagccaatc 234  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||    
T  3529849 taattgagtccaaattattaagaagataaaaatccaagcagccaatc 3529803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 175 - 236
Target Start/End: Original strand, 33609421 - 33609482
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatcgt 236  Q
    |||||| |||||||||||||||||||||||||||||| |||||||| |||||||||||||||    
T  33609421 atttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatcgt 33609482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 175 - 251
Target Start/End: Complemental strand, 31336145 - 31336069
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatcgtaacaagccacgtgtc 251  Q
    |||||| |||||||||||||||||||| |||||| |  ||||||||||||||||||||||| ||| |||||||||||    
T  31336145 atttgcaatgaaataattgagtccaaaatattaaaatgataaaaattcaagcagccaatcgaaaccagccacgtgtc 31336069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 175 - 251
Target Start/End: Complemental strand, 33077473 - 33077397
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatcgtaacaagccacgtgtc 251  Q
    |||||| |||||||||||||||||||||||||||||| |||||||| |||||||||||||  |||| |||| |||||    
T  33077473 atttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatcaaaacatgccaagtgtc 33077397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 175 - 251
Target Start/End: Original strand, 52018112 - 52018188
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatcgtaacaagccacgtgtc 251  Q
    |||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||||||  |||| |||| |||||    
T  52018112 atttgcaatgaaataattgagtccaaattattgagaagataaaaattcaagcagccaatcaaaacatgccaagtgtc 52018188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 175 - 234
Target Start/End: Complemental strand, 34198860 - 34198801
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatc 234  Q
    |||||| |||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  34198860 atttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatc 34198801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 175 - 234
Target Start/End: Original strand, 40721474 - 40721533
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatc 234  Q
    |||||| |||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  40721474 atttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatc 40721533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 175 - 245
Target Start/End: Original strand, 28447685 - 28447755
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatcgtaacaagcca 245  Q
    |||||| |||||||||||||||||||| |||||||| |||||||||  |||||||||||||||||| ||||    
T  28447685 atttgcaatgaaataattgagtccaaagtattaagataataaaaatcgaagcagccaatcgtaacatgcca 28447755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 88 - 150
Target Start/End: Original strand, 56054630 - 56054692
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    |||||||||||||||||||||||||  ||||||| ||||| ||||||||||||||||||||||    
T  56054630 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaaatcacgaattttggt 56054692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 175 - 236
Target Start/End: Original strand, 33523843 - 33523904
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatcgt 236  Q
    |||||| |||||||||||||||||||||||||||||| |||||||| ||| |||||||||||    
T  33523843 atttgcaatgaaataattgagtccaaattattaagaagataaaaatccaaacagccaatcgt 33523904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 182 - 251
Target Start/End: Complemental strand, 34434151 - 34434082
Alignment:
Q  182 atgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatcgtaacaagccacgtgtc 251  Q
    |||||||||||||||||||| |||||||| |||||||||  |||||||||||||||||| |||| |||||    
T  34434151 atgaaataattgagtccaaaatattaagataataaaaatctaagcagccaatcgtaacatgccaagtgtc 34434082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 182 - 234
Target Start/End: Complemental strand, 18468960 - 18468908
Alignment:
Q  182 atgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatc 234  Q
    |||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  18468960 atgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatc 18468908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 46 - 150
Target Start/End: Complemental strand, 33077589 - 33077485
Alignment:
Q  46 gctaataataagattaagatagtgaaaattttgannnnnnnnctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaatt 145  Q
    ||||||||||||||||||| |||||||| |||||        |||||||||||||||||||||||||  | ||||| ||||| |||| |||| |||||||    
T  33077589 gctaataataagattaagagagtgaaaaatttgattttttttctgtgtccaaatcaaatgatccaagtctttatttatagagaaaaagaaattacgaatt 33077490  T
Q  146 ttggt 150  Q
    |||||    
T  33077489 ttggt 33077485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 33523705 - 33523761
Alignment:
Q  17 taaacaaagactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaa 73  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||| ||||||||    
T  33523705 taaacaaagactaaaacttcaaaagaaatgcttttaataagattaagagagtgaaaa 33523761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 47 - 150
Target Start/End: Original strand, 16021181 - 16021284
Alignment:
Q  47 ctaataataagattaagatagtgaaaattttgannnnnnnnctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattt 146  Q
    |||||||||||||||||| ||||||||  ||||        |||||||||||||||||||||||||  ||||||| ||||| ||||||||| || |||||    
T  16021181 ctaataataagattaagagagtgaaaaacttgattttttttctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaaattacaaattt 16021280  T
Q  147 tggt 150  Q
    ||||    
T  16021281 tggt 16021284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 88 - 150
Target Start/End: Complemental strand, 34198947 - 34198885
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    |||||||||||||||||||||||||  ||||||  ||||||||||||||| ||||||||||||    
T  34198947 ctgtgtccaaatcaaatgatccaagtctctattaatagaggaaaaaaaattacgaattttggt 34198885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 46 - 148
Target Start/End: Complemental strand, 34463270 - 34463168
Alignment:
Q  46 gctaataataagattaagatagtgaaaattttgannnnnnnnctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaatt 145  Q
    ||||||||||||||||||| ||||||||  ||||        ||||||||||||||||| |||||||  ||||||| ||||| ||||||||| |||||||    
T  34463270 gctaataataagattaagagagtgaaaaacttgattttttttctgtgtccaaatcaaataatccaagtctctatttatagagaaaaaaaaattacgaatt 34463171  T
Q  146 ttg 148  Q
    |||    
T  34463170 ttg 34463168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 88 - 150
Target Start/End: Complemental strand, 53181171 - 53181109
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    ||||||||||||||||||||| |||  ||||||| ||||||||||||||||| ||||||||||    
T  53181171 ctgtgtccaaatcaaatgatcaaagtctctatttatagaggaaaaaaaatcatgaattttggt 53181109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 175 - 251
Target Start/End: Complemental strand, 23539280 - 23539204
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatcgtaacaagccacgtgtc 251  Q
    |||||| |||||||||||||||||||| ||||||||  ||||||||  ||||||||||| | ||| |||||||||||    
T  23539280 atttgcaatgaaataattgagtccaaaatattaagatgataaaaatctaagcagccaattgaaaccagccacgtgtc 23539204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 175 - 251
Target Start/End: Original strand, 52773355 - 52773431
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatcgtaacaagccacgtgtc 251  Q
    |||||| |||||||||||  ||||||||||||||||| |||||||||| |||||||||||  |||| |||| |||||    
T  52773355 atttgcaatgaaataattaggtccaaattattaagaagataaaaattcgagcagccaatcaaaacatgccaagtgtc 52773431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 175 - 235
Target Start/End: Original strand, 56054710 - 56054770
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatcg 235  Q
    |||||| |||||||||||||||||||| ||||||||  |||||||| ||||||||||||||    
T  56054710 atttgcaatgaaataattgagtccaaaatattaagatgataaaaatccaagcagccaatcg 56054770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 175 - 234
Target Start/End: Complemental strand, 16171505 - 16171446
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatc 234  Q
    |||||| |||||||||||||||||||||||||||||| |||||||| ||  |||||||||    
T  16171505 atttgcaatgaaataattgagtccaaattattaagaagataaaaatccagccagccaatc 16171446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 175 - 234
Target Start/End: Complemental strand, 23389574 - 23389515
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatc 234  Q
    |||||| ||||||||||||||||||||| |||||||| |||||||| ||||||| |||||    
T  23389574 atttgcaatgaaataattgagtccaaataattaagaagataaaaatccaagcagtcaatc 23389515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 88 - 150
Target Start/End: Complemental strand, 31336221 - 31336161
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    |||||||||||||||||||||||||  ||||||| |||||  |||||||||||||||||||||    
T  31336221 ctgtgtccaaatcaaatgatccaagtctctatttatagag--aaaaaaatcacgaattttggt 31336161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 175 - 234
Target Start/End: Complemental strand, 55549661 - 55549602
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatc 234  Q
    |||||| |||||||||||| ||||||||||||||||| |||||||||| ||||| |||||    
T  55549661 atttgcaatgaaataattgggtccaaattattaagaagataaaaattcgagcagtcaatc 55549602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 88 - 150
Target Start/End: Complemental strand, 2212035 - 2211973
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    ||||||||||||||||||| |||||  ||||||| ||||| ||||||||||| ||||||||||    
T  2212035 ctgtgtccaaatcaaatgaaccaagtctctatttatagagaaaaaaaaatcatgaattttggt 2211973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 88 - 150
Target Start/End: Complemental strand, 21654541 - 21654480
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    |||||||||||||||||||||||||  ||||||| |||| |||||||||||| ||||||||||    
T  21654541 ctgtgtccaaatcaaatgatccaagtctctatttataga-gaaaaaaaatcatgaattttggt 21654480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 88 - 150
Target Start/End: Original strand, 28901499 - 28901560
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    |||||||||||||||||||||||||  ||||||| |||| || ||||||||||||||||||||    
T  28901499 ctgtgtccaaatcaaatgatccaagtctctatttataga-gagaaaaaatcacgaattttggt 28901560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 88 - 150
Target Start/End: Complemental strand, 40596453 - 40596391
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    ||||||||||||||||||| |||||  ||||||| ||||| ||||||||||| ||||||||||    
T  40596453 ctgtgtccaaatcaaatgaaccaagtctctatttatagagaaaaaaaaatcatgaattttggt 40596391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 88 - 150
Target Start/End: Complemental strand, 46914229 - 46914167
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    ||||||||||||||||||| |||||  ||||||| ||||| ||||||||||| ||||||||||    
T  46914229 ctgtgtccaaatcaaatgaaccaagtctctatttatagagaaaaaaaaatcatgaattttggt 46914167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 46 - 150
Target Start/End: Complemental strand, 55549784 - 55549679
Alignment:
Q  46 gctaataataagattaagatagtgaaaattttgannnnnnnnctgtgtccaaatcaaatgatccaagattctatttgtagag-gaaaaaaaatcacgaat 144  Q
    ||||||||||||||||||| ||||||||  ||||        ||||||||||||||||| |||||||  ||||||| |||||  ||||||||| ||||||    
T  55549784 gctaataataagattaagagagtgaaaaacttgattttttttctgtgtccaaatcaaattatccaagtctctatttatagagaaaaaaaaaattacgaat 55549685  T
Q  145 tttggt 150  Q
    ||||||    
T  55549684 tttggt 55549679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 175 - 235
Target Start/End: Original strand, 28901577 - 28901637
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatcg 235  Q
    |||||| ||||||||||||||| |||| ||||||||  |||||||| ||||||||||||||    
T  28901577 atttgcaatgaaataattgagtgcaaaatattaagatgataaaaatccaagcagccaatcg 28901637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 175 - 235
Target Start/End: Complemental strand, 48506203 - 48506143
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatcg 235  Q
    |||||| |||||||||||||||| ||| ||||||||  |||||||| ||||||||||||||    
T  48506203 atttgcaatgaaataattgagtctaaaatattaagatgataaaaatccaagcagccaatcg 48506143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 88 - 147
Target Start/End: Complemental strand, 48506284 - 48506227
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaatttt 147  Q
    |||||||||||||||||||||||||  ||||||| |||||  ||||||||||||||||||    
T  48506284 ctgtgtccaaatcaaatgatccaagtctctatttatagag--aaaaaaatcacgaatttt 48506227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 226
Target Start/End: Complemental strand, 3614851 - 3614800
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagc 226  Q
    |||||| |||||||||||||||||||| ||||||||| |||||||| |||||    
T  3614851 atttgcaatgaaataattgagtccaaagtattaagaagataaaaatccaagc 3614800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 234
Target Start/End: Complemental strand, 34463145 - 34463086
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatc 234  Q
    |||||| |||||||||||| ||||||||||||||||| ||||||||  || |||||||||    
T  34463145 atttgcaatgaaataattgggtccaaattattaagaagataaaaatcgaaacagccaatc 34463086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 148
Target Start/End: Original strand, 40721393 - 40721452
Alignment:
Q  89 tgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttg 148  Q
    |||||||||||||||||||| |||  ||||||| ||||| ||||||||| ||||||||||    
T  40721393 tgtgtccaaatcaaatgatcaaagtatctatttatagagaaaaaaaaattacgaattttg 40721452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 88 - 150
Target Start/End: Original strand, 13113913 - 13113975
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    |||||||||||||||||||||||||  ||||||| |||||  |||||||| || |||||||||    
T  13113913 ctgtgtccaaatcaaatgatccaagtctctatttatagagagaaaaaaattacaaattttggt 13113975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 175 - 251
Target Start/End: Original strand, 13113991 - 13114064
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatcgtaacaagccacgtgtc 251  Q
    |||||| |||||||||||| |||||||||||||||   |||||||| |||||||||||||  |||| |||| |||||    
T  13113991 atttgcaatgaaataattgggtccaaattattaag---ataaaaatccaagcagccaatcaaaacatgccatgtgtc 13114064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 182 - 220
Target Start/End: Complemental strand, 17329508 - 17329470
Alignment:
Q  182 atgaaataattgagtccaaattattaagaaaataaaaat 220  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  17329508 atgaaataattgagtccaaattattaagaagataaaaat 17329470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 88 - 150
Target Start/End: Original strand, 28447607 - 28447669
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    |||||||||||||||||||| ||||  ||||||| |||||  ||||||||||| |||||||||    
T  28447607 ctgtgtccaaatcaaatgattcaagtctctatttatagagagaaaaaaatcacaaattttggt 28447669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 89 - 150
Target Start/End: Complemental strand, 31848491 - 31848429
Alignment:
Q  89 tgtgtccaaatcaaatgatccaagattctatttgtagag-gaaaaaaaatcacgaattttggt 150  Q
    ||||||||||||||||||||||||  ||||||| |||||  ||||||||||| ||||||||||    
T  31848491 tgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaaaatcatgaattttggt 31848429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 175 - 220
Target Start/End: Original strand, 4982121 - 4982166
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaat 220  Q
    |||||| ||||||||||||| |||||||||||||||| ||||||||    
T  4982121 atttgcaatgaaataattgaatccaaattattaagaagataaaaat 4982166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 89 - 150
Target Start/End: Original strand, 19409864 - 19409925
Alignment:
Q  89 tgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    |||||||||||||||||| |||||  ||||||| |||||  | |||||||||||||||||||    
T  19409864 tgtgtccaaatcaaatgaaccaagtctctatttctagagagagaaaaatcacgaattttggt 19409925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 89 - 150
Target Start/End: Complemental strand, 34434234 - 34434174
Alignment:
Q  89 tgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    |||||||||||||||||||| |||  |||||||||||| ||||||| ||||| |||||||||    
T  34434234 tgtgtccaaatcaaatgatcaaagtctctatttgtaga-gaaaaaatatcacaaattttggt 34434174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 88 - 150
Target Start/End: Complemental strand, 27141900 - 27141837
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattcta-tttgtagaggaaaaaaaatcacgaattttggt 150  Q
    ||||||||||||||||||| |||||  |||| ||| ||||| ||||||||||| ||||||||||    
T  27141900 ctgtgtccaaatcaaatgaaccaagtctctaatttatagagaaaaaaaaatcatgaattttggt 27141837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 88 - 150
Target Start/End: Complemental strand, 47749767 - 47749704
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaa-aaaatcacgaattttggt 150  Q
    ||||||||||||||||||| |||||  ||||||| | |||||||| ||||||| ||||||||||    
T  47749767 ctgtgtccaaatcaaatgaaccaagtctctatttatggaggaaaaaaaaatcatgaattttggt 47749704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 150
Target Start/End: Complemental strand, 39048742 - 39048680
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    |||| |||||||||||||| |||||  ||||||| ||||  ||||||||||| ||||||||||    
T  39048742 ctgtatccaaatcaaatgaaccaagtctctatttatagacaaaaaaaaatcatgaattttggt 39048680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 23539445 - 23539408
Alignment:
Q  15 actaaacaaagactaaaacttcaaaagaaatgctaata 52  Q
    |||||| ||||||||||||||||||||||| |||||||    
T  23539445 actaaataaagactaaaacttcaaaagaaaagctaata 23539408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 52773188 - 52773225
Alignment:
Q  15 actaaacaaagactaaaacttcaaaagaaatgctaata 52  Q
    |||||| ||| |||||||||||||||||||||||||||    
T  52773188 actaaataaacactaaaacttcaaaagaaatgctaata 52773225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 54
Target Start/End: Original strand, 52018020 - 52018052
Alignment:
Q  22 aaagactaaaacttcaaaagaaatgctaataat 54  Q
    ||||||||||||||||||||||| |||||||||    
T  52018020 aaagactaaaacttcaaaagaaaagctaataat 52018052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 144
Target Start/End: Original strand, 52773273 - 52773329
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaat 144  Q
    |||||||||||||||||||| ||||  ||||||| || || ||||||||| ||||||    
T  52773273 ctgtgtccaaatcaaatgattcaagtctctatttatacagaaaaaaaaattacgaat 52773329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 148
Target Start/End: Complemental strand, 55408256 - 55408196
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttg 148  Q
    ||||||||||||||||||| |||||  ||||||| ||||  ||| ||||||| ||||||||    
T  55408256 ctgtgtccaaatcaaatgaaccaagtctctatttatagacaaaataaaatcatgaattttg 55408196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 116; Significance: 4e-59; HSPs: 54)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 14 - 251
Target Start/End: Original strand, 26244934 - 26245170
Alignment:
Q  14 tactaaacaaagactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaattttgannnnnnnnctgtgtccaaatcaaatgatccaaga 113  Q
    ||||||||||| |||||||||||||||||||||| |||||||||||||||| |||||||| |||||        |||||||||||||||||||||||||     
T  26244934 tactaaacaaaaactaaaacttcaaaagaaatgcaaataataagattaagagagtgaaaaatttgatttttattctgtgtccaaatcaaatgatccaagt 26245033  T
Q  114 ttctatttgtagaggaaaaaaaatcacgaattttggtnnnnnnnnnttaaannnnnnnnnnatttgctatgaaataattgagtccaaattattaagaaaa 213  Q
    |||||||||||||| ||||||||||||||||||||||         | | |          |||||||||||||||||||||||||||||||||||||||    
T  26245034 ttctatttgtagagaaaaaaaaatcacgaattttggtaaaaaaaa-taataatttttttttatttgctatgaaataattgagtccaaattattaagaaaa 26245132  T
Q  214 taaaaattcaagcagccaatcgtaacaagccacgtgtc 251  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  26245133 taaaaatccaagcagccaatcgtaacaagccacgtgtc 26245170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 16 - 251
Target Start/End: Original strand, 40283914 - 40284147
Alignment:
Q  16 ctaaacaaagactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaattttgannnnnnnnctgtgtccaaatcaaatgatccaagatt 115  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| |||||        ||||||||||||||||||||||||| ||    
T  40283914 ctaaacaaagactaaaactttaaaagaaatgctaataataagattaagagagtgaaaaatttgatttttattctgtgtccaaatcaaatgatccaagttt 40284013  T
Q  116 ctatttgtagaggaaaaaaaatcacgaattttggtnnnnnnnnnttaaannnnnnnnnnatttgctatgaaataattgagtccaaattattaagaaaata 215  Q
    |||||||||||| |||||||||||||||||||| |         ||             |||||||||||||||||||||||||||||||||||||||||    
T  40284014 ctatttgtagagaaaaaaaaatcacgaattttgataaaaaaaaattt--ttttttttttatttgctatgaaataattgagtccaaattattaagaaaata 40284111  T
Q  216 aaaattcaagcagccaatcgtaacaagccacgtgtc 251  Q
    ||||| ||||||||||||||||||||||||||||||    
T  40284112 aaaatccaagcagccaatcgtaacaagccacgtgtc 40284147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 15 - 251
Target Start/End: Original strand, 23550048 - 23550286
Alignment:
Q  15 actaaacaaagactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaattttgannnnnnnn--ctgtgtccaaatcaaatgatccaag 112  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||           |||||||||||||||||||| ||||    
T  23550048 actaatcaaagactaaaacttcaaaagaaatgctaataataagattaagagagtgaaaaatttggttttttatttctgtgtccaaatcaaatgattcaag 23550147  T
Q  113 attctatttgtagaggaaaaaaaatcacgaattttggtnnnnnnnnnttaaannnnnnnnnnatttgctatgaaataattgagtccaaattattaagaaa 212  Q
      |||||||||||||| |||||||||| ||||||||||          ||||          |||||| |||||||||||||||| |||||||||||||     
T  23550148 tctctatttgtagagggaaaaaaatcatgaattttggtaaaaaataaataaaaaataaataaatttgcaatgaaataattgagtctaaattattaagaag 23550247  T
Q  213 ataaaaattcaagcagccaatcgtaacaagccacgtgtc 251  Q
    |||||||||||||||||||||||||||||||||||||||    
T  23550248 ataaaaattcaagcagccaatcgtaacaagccacgtgtc 23550286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 15 - 150
Target Start/End: Original strand, 29731989 - 29732124
Alignment:
Q  15 actaaacaaagactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaattttgannnnnnnnctgtgtccaaatcaaatgatccaagat 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | |||        ||||||||||||||||||||| |||      
T  29731989 actaaacaaagactaaaacttcaaaagaaatgctaataataagattaagagagtgaaaaatatgattttttttctgtgtccaaatcaaatgatcaaagtc 29732088  T
Q  115 tctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    ||||||||||||| ||||||||||||||||||||||    
T  29732089 tctatttgtagagaaaaaaaaatcacgaattttggt 29732124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 15 - 150
Target Start/End: Complemental strand, 1633181 - 1633048
Alignment:
Q  15 actaaacaaagactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaattttgannnnnnnnctgtgtccaaatcaaatgatccaagat 114  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| | |||        ||||||||||||||||||||| |||      
T  1633181 actaaacaaagactaaaacttcaaaagaaatgctaattataagattaagagagtgaaaaatatgattttttttctgtgtccaaatcaaatgatcaaagtc 1633082  T
Q  115 tctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    ||||||| |||||  |||||||| ||||||||||||    
T  1633081 tctatttatagag--aaaaaaattacgaattttggt 1633048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 15 - 122
Target Start/End: Original strand, 13947769 - 13947876
Alignment:
Q  15 actaaacaaagactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaattttgannnnnnnnctgtgtccaaatcaaatgatccaagat 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||         |||||||||||| ||||||||||||      
T  13947769 actaaacaaagactaaaacttcaaaagaaatgctaataataagattaagagagtgaaaattttggttttttttctgtgtccaaatgaaatgatccaagtc 13947868  T
Q  115 tctatttg 122  Q
    ||||||||    
T  13947869 tctatttg 13947876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 15 - 150
Target Start/End: Complemental strand, 13783954 - 13783815
Alignment:
Q  15 actaaacaaagactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaattttg----annnnnnnnctgtgtccaaatcaaatgatcca 110  Q
    |||||||||| |||| |||||||||||||||||||||||||| ||||||| |||||||||||||             |||||||||||||||||||||||    
T  13783954 actaaacaaaaactagaacttcaaaagaaatgctaataataaaattaagagagtgaaaattttggttttttttttttctgtgtccaaatcaaatgatcca 13783855  T
Q  111 agattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    ||  ||||||||||||| |||||| |||||||||||||||    
T  13783854 agtctctatttgtagagaaaaaaatatcacgaattttggt 13783815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 78
Target Start/End: Original strand, 44150207 - 44150268
Alignment:
Q  17 taaacaaagactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaattttg 78  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  44150207 taaacaaagactaaaacttcaaaagaaatgctaataataagattaagagagtgaaaattttg 44150268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 150
Target Start/End: Complemental strand, 1955007 - 1954873
Alignment:
Q  22 aaagactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaattttg--annnnnnnnctgtgtccaaatcaaatgatccaagattc--- 116  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||           |||||||||||||||||||||||||  ||       
T  1955007 aaagactaaaacttcaaaagaaatgctaataataagattaagagagtgaaaattatggttttttttttctgtgtccaaatcaaatgatccaagtctctat 1954908  T
Q  117 -tatttgtagaggaaaaaaaatcacgaattttggt 150  Q
     ||||| ||||| ||||||||||||||||||||||    
T  1954907 ttatttatagagaaaaaaaaatcacgaattttggt 1954873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 175 - 251
Target Start/End: Original strand, 13947900 - 13947976
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatcgtaacaagccacgtgtc 251  Q
    ||||| ||||||||||||||||||||||||||||||| |||||||| |||| |||||||||||||  ||||||||||    
T  13947900 atttgttatgaaataattgagtccaaattattaagaagataaaaatccaagtagccaatcgtaacgcgccacgtgtc 13947976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 175 - 236
Target Start/End: Original strand, 44503732 - 44503793
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatcgt 236  Q
    |||||| |||||||||||||||||||||||||||||| |||||||| |||||||||||||||    
T  44503732 atttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatcgt 44503793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 175 - 251
Target Start/End: Original strand, 15057050 - 15057126
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatcgtaacaagccacgtgtc 251  Q
    |||||| |||||||||||||||||||||||||||||| |||||||| |||||||||||||  |||| |||| |||||    
T  15057050 atttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatcaaaacatgccaagtgtc 15057126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 238
Target Start/End: Complemental strand, 31129213 - 31128999
Alignment:
Q  15 actaaacaaagactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaattttgannnnnnnn-ctgtgtccaaatcaaatgatccaaga 113  Q
    |||||| ||||||||||||||||||||||| |||||  |||||||||||| ||||||||  |||          |||||||||||||||||||||||||     
T  31129213 actaaataaagactaaaacttcaaaagaaaagctaa--ataagattaagagagtgaaaaacttgggttttttttctgtgtccaaatcaaatgatccaagt 31129116  T
Q  114 ttctatttgtagaggaaaaaaaatcacgaattttggtnnnnnnnnnttaaannnnnnnnnnatttgctatgaaataattgagtccaaattattaagaaaa 213  Q
     ||||||| ||||| ||||||||||| ||||||||||          ||||          | |||| |||||||||||||||||||||||||||||  |    
T  31129115 ctctatttatagag-aaaaaaaatcatgaattttggtaaaaataaaataaaatt-------agttgcaatgaaataattgagtccaaattattaagatga 31129024  T
Q  214 taaaaattcaagcagccaatcgtaa 238  Q
    ||||||| |||||||||||||||||    
T  31129023 taaaaatccaagcagccaatcgtaa 31128999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 175 - 234
Target Start/End: Original strand, 44150349 - 44150408
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatc 234  Q
    |||||| |||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  44150349 atttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatc 44150408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 88 - 150
Target Start/End: Original strand, 42861078 - 42861140
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    |||||||||||||||||||||||||  ||||||| ||||||||||||||||| ||||||||||    
T  42861078 ctgtgtccaaatcaaatgatccaagtctctatttatagaggaaaaaaaatcatgaattttggt 42861140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 175 - 227
Target Start/End: Complemental strand, 43523874 - 43523822
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagca 227  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  43523874 atttgcaatgaaataattgagtccaaattattaagaaaataaaaatccaagca 43523822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 175 - 234
Target Start/End: Original strand, 29732149 - 29732208
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatc 234  Q
    |||||| |||||||||||||||||||||||||||||| |||||||| ||| |||||||||    
T  29732149 atttgcaatgaaataattgagtccaaattattaagaagataaaaatccaaacagccaatc 29732208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 88 - 150
Target Start/End: Original strand, 13817432 - 13817494
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    |||||||||||||||||||||||||  ||||||| ||||| ||||||||||| ||||||||||    
T  13817432 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaaatcatgaattttggt 13817494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 175 - 233
Target Start/End: Complemental strand, 30529261 - 30529203
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaat 233  Q
    |||||| ||||||||||||||||||||||||| |||| |||||||||||||||| ||||    
T  30529261 atttgcaatgaaataattgagtccaaattatttagaagataaaaattcaagcagtcaat 30529203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 64
Target Start/End: Complemental strand, 30529404 - 30529362
Alignment:
Q  22 aaagactaaaacttcaaaagaaatgctaataataagattaaga 64  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  30529404 aaagactaaaacttcaaaagaaatgctaataataagattaaga 30529362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 15 - 150
Target Start/End: Original strand, 44503569 - 44503710
Alignment:
Q  15 actaaacaaagactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaa------ttttgannnnnnnnctgtgtccaaatcaaatgatc 108  Q
    |||||||||| | |||||||||||||||||||||  |||||||||||||| ||||||||      ||||          ||||||||||||||||| |||    
T  44503569 actaaacaaatattaaaacttcaaaagaaatgcttttaataagattaagagagtgaaaaacttggtttttttttcttttctgtgtccaaatcaaataatc 44503668  T
Q  109 caagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    |||   ||||||||||||| ||||||||||| ||||||||||    
T  44503669 caattctctatttgtagagaaaaaaaaatcatgaattttggt 44503710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 88 - 234
Target Start/End: Complemental strand, 45100713 - 45100568
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggtnnnnnnnnnttaaannnnnnnnnnatttgctatgaaa 187  Q
    |||||||||||||||||||||||||  ||||||| ||||| ||||||||| ||||||||||||         | |||          |||||| ||||||    
T  45100713 ctgtgtccaaatcaaatgatccaagtctctatttatagag-aaaaaaaattacgaattttggtaaaaaaaaataaaaataaaaatttatttgcaatgaaa 45100615  T
Q  188 taattgagtccaaattattaagaaaataaaaattcaagcagccaatc 234  Q
    |||||| ||||||||||||||||| |||||||| | |||||||||||    
T  45100614 taattgggtccaaattattaagaagataaaaatccgagcagccaatc 45100568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 88 - 148
Target Start/End: Complemental strand, 4625216 - 4625156
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttg 148  Q
    ||||||||||||||||||| |||||  ||||||| ||||||||||||||||| ||||||||    
T  4625216 ctgtgtccaaatcaaatgaaccaagtctctatttatagaggaaaaaaaatcatgaattttg 4625156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 175 - 251
Target Start/End: Original strand, 13497732 - 13497808
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatcgtaacaagccacgtgtc 251  Q
    |||||| |||||||||||||||||| | ||||||||  |||||||| |||||||||||||| |||  ||||||||||    
T  13497732 atttgcaatgaaataattgagtccagaatattaagatgataaaaatccaagcagccaatcgaaacgcgccacgtgtc 13497808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 46 - 150
Target Start/End: Original strand, 35932196 - 35932300
Alignment:
Q  46 gctaataataagattaagatagtgaaaattttgannnnnnnnctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaatt 145  Q
    ||||||||||||||||||| ||||||||  || |        ||||||||||||||||||||  |||  ||||||| ||||| |||||||||||||||||    
T  35932196 gctaataataagattaagagagtgaaaaacttaattttttttctgtgtccaaatcaaatgatttaagtctctatttatagagaaaaaaaaatcacgaatt 35932295  T
Q  146 ttggt 150  Q
    |||||    
T  35932296 ttggt 35932300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 175 - 234
Target Start/End: Original strand, 35932324 - 35932383
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatc 234  Q
    |||||| |||||||||||||||||||| ||||||||| |||||||||||  |||||||||    
T  35932324 atttgcaatgaaataattgagtccaaagtattaagaagataaaaattcagccagccaatc 35932383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 175 - 234
Target Start/End: Complemental strand, 38204878 - 38204819
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatc 234  Q
    |||||| |||||||||||||||||||||||||||||| |||||||| |||  ||||||||    
T  38204878 atttgcaatgaaataattgagtccaaattattaagaagataaaaatccaacgagccaatc 38204819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 48 - 150
Target Start/End: Original strand, 231696 - 231798
Alignment:
Q  48 taataataagattaagatagtgaaaattttgannnnnnnnctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaatttt 147  Q
    |||||||||||||||||||||||||||||||         |||||||||||| ||||||  ||||  ||||||| |||||| |||||||||  |||||||    
T  231696 taataataagattaagatagtgaaaattttggttttttttctgtgtccaaattaaatgaatcaagtctctatttatagagggaaaaaaatcgtgaatttt 231795  T
Q  148 ggt 150  Q
    |||    
T  231796 ggt 231798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 48 - 150
Target Start/End: Original strand, 708107 - 708209
Alignment:
Q  48 taataataagattaagatagtgaaaattttgannnnnnnnctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaatttt 147  Q
    |||||||||||||||||||||||||||||||         |||||||||||| ||||||  ||||  ||||||| |||||| |||||||||  |||||||    
T  708107 taataataagattaagatagtgaaaattttggttttttttctgtgtccaaattaaatgaatcaagtctctatttatagagggaaaaaaatcgtgaatttt 708206  T
Q  148 ggt 150  Q
    |||    
T  708207 ggt 708209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 48 - 150
Target Start/End: Original strand, 745319 - 745421
Alignment:
Q  48 taataataagattaagatagtgaaaattttgannnnnnnnctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaatttt 147  Q
    |||||||||||||||||||||||||||||||         |||||||||||| ||||||  ||||  ||||||| |||||| |||||||||  |||||||    
T  745319 taataataagattaagatagtgaaaattttggttttttttctgtgtccaaattaaatgaatcaagtctctatttatagagggaaaaaaatcgtgaatttt 745418  T
Q  148 ggt 150  Q
    |||    
T  745419 ggt 745421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 48 - 150
Target Start/End: Original strand, 869214 - 869316
Alignment:
Q  48 taataataagattaagatagtgaaaattttgannnnnnnnctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaatttt 147  Q
    |||||||||||||||||||||||||||||||         |||||||||||| ||||||  ||||  ||||||| |||||| |||||||||  |||||||    
T  869214 taataataagattaagatagtgaaaattttggttttttttctgtgtccaaattaaatgaatcaagtctctatttatagagggaaaaaaatcgtgaatttt 869313  T
Q  148 ggt 150  Q
    |||    
T  869314 ggt 869316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 88 - 150
Target Start/End: Original strand, 5214178 - 5214240
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    |||||||||||||||||||||||||  ||||||| ||  ||||||||||||| ||||||||||    
T  5214178 ctgtgtccaaatcaaatgatccaagtctctatttatatgggaaaaaaaatcatgaattttggt 5214240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 88 - 150
Target Start/End: Complemental strand, 8449725 - 8449663
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    ||||||||||||||||||| |||||  ||||||| ||||| ||||||||||| ||||||||||    
T  8449725 ctgtgtccaaatcaaatgaaccaagtctctatttatagagaaaaaaaaatcatgaattttggt 8449663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 88 - 150
Target Start/End: Complemental strand, 30470510 - 30470448
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    ||||||||||||||||||| |||||  ||||||| ||||| ||||||||||| ||||||||||    
T  30470510 ctgtgtccaaatcaaatgaaccaagtctctatttatagagaaaaaaaaatcatgaattttggt 30470448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 88 - 150
Target Start/End: Original strand, 42860305 - 42860367
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    |||||||||||||||||||||||||  ||||||| |||||  |||||||| ||||||||||||    
T  42860305 ctgtgtccaaatcaaatgatccaagtctctatttatagagagaaaaaaattacgaattttggt 42860367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 175 - 220
Target Start/End: Complemental strand, 1633024 - 1632979
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaat 220  Q
    |||||| |||||||||||||||||||||||||||||| ||||||||    
T  1633024 atttgcaatgaaataattgagtccaaattattaagaagataaaaat 1632979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 175 - 235
Target Start/End: Complemental strand, 7511366 - 7511306
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatcg 235  Q
    |||||| |||||||||||||||||||| ||||||||  |||||||| |||| |||||||||    
T  7511366 atttgcaatgaaataattgagtccaaaatattaagatgataaaaatccaagtagccaatcg 7511306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 95 - 150
Target Start/End: Complemental strand, 38204952 - 38204896
Alignment:
Q  95 caaatcaaatgatccaagattctatttgtagag-gaaaaaaaatcacgaattttggt 150  Q
    ||||||||||||||||||  |||||||||||||  ||||||||||||||||||||||    
T  38204952 caaatcaaatgatccaagtctctatttgtagagaaaaaaaaaatcacgaattttggt 38204896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 91 - 150
Target Start/End: Original strand, 13497655 - 13497714
Alignment:
Q  91 tgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    ||||||||| ||||||||||||  | ||||| ||||| ||||||||||||||||||||||    
T  13497655 tgtccaaattaaatgatccaagtctttatttatagagaaaaaaaaatcacgaattttggt 13497714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 234
Target Start/End: Complemental strand, 13783797 - 13783738
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatc 234  Q
    |||||| ||||||||||| | |||||||||||||||| |||||||| ||| |||||||||    
T  13783797 atttgcaatgaaataatttaatccaaattattaagaagataaaaatccaaccagccaatc 13783738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 88 - 150
Target Start/End: Complemental strand, 26631844 - 26631783
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    ||||||||||||||||||| |||||  ||||||| |||| |||||||||||| ||||||||||    
T  26631844 ctgtgtccaaatcaaatgaaccaagtctctatttataga-gaaaaaaaatcatgaattttggt 26631783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 88 - 150
Target Start/End: Complemental strand, 26748650 - 26748589
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    ||||||||||||||||||| |||||  ||||||| |||| |||||||||||| ||||||||||    
T  26748650 ctgtgtccaaatcaaatgaaccaagtctctatttataga-gaaaaaaaatcatgaattttggt 26748589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 88 - 150
Target Start/End: Complemental strand, 34955024 - 34954962
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    ||||||||||||||||||| |||||  ||||||| ||||| |||||||||||  |||||||||    
T  34955024 ctgtgtccaaatcaaatgaaccaagtctctatttatagagaaaaaaaaatcataaattttggt 34954962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 175 - 234
Target Start/End: Original strand, 42860386 - 42860447
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaat--aaaaattcaagcagccaatc 234  Q
    |||||| |||||||||||| ||||||||||||||||| ||  |||||||| |||||||||||    
T  42860386 atttgcaatgaaataattgggtccaaattattaagaagataaaaaaattcgagcagccaatc 42860447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 175 - 220
Target Start/End: Complemental strand, 1954857 - 1954812
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaat 220  Q
    |||||| |||||||||||||||||||| ||||||||| ||||||||    
T  1954857 atttgcaatgaaataattgagtccaaagtattaagaagataaaaat 1954812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 147
Target Start/End: Complemental strand, 12272150 - 12272093
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaatttt 147  Q
    |||||||||||||||||||||||||  ||||||| |||||  |||||||||| |||||||    
T  12272150 ctgtgtccaaatcaaatgatccaagtctctatttatagag--aaaaaaatcatgaatttt 12272093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 148
Target Start/End: Original strand, 36912949 - 36913009
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttg 148  Q
    |||||||||||| |||||| |||||  ||||||| ||||| ||||||||||| ||||||||    
T  36912949 ctgtgtccaaattaaatgaaccaagtctctatttatagagaaaaaaaaatcatgaattttg 36913009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 88 - 150
Target Start/End: Original strand, 5736403 - 5736463
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    ||||||||||||||||||| |||||  ||||||| |||||  |||||||||| ||||||||||    
T  5736403 ctgtgtccaaatcaaatgaaccaagtctctatttatagag--aaaaaaatcatgaattttggt 5736463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 88 - 150
Target Start/End: Original strand, 17744960 - 17745019
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    ||||||||||||||||||| |||||  ||||||| |||| |||||||||||| ||||||||||    
T  17744960 ctgtgtccaaatcaaatgaaccaag--tctatttataga-gaaaaaaaatcatgaattttggt 17745019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 88 - 150
Target Start/End: Complemental strand, 18029035 - 18028972
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagag-gaaaaaaaatcacgaattttggt 150  Q
    ||||||||||||||||||| |||||  ||||||| |||||  ||||||||||| ||||||||||    
T  18029035 ctgtgtccaaatcaaatgaaccaagtctctatttatagagaaaaaaaaaatcatgaattttggt 18028972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 233
Target Start/End: Complemental strand, 12272068 - 12272010
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaat 233  Q
    |||||| |||||||||||||||| ||| ||||||||  |||||||| ||||||| ||||    
T  12272068 atttgcaatgaaataattgagtctaaaatattaagatgataaaaatccaagcagtcaat 12272010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 150
Target Start/End: Complemental strand, 43617918 - 43617856
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    |||||||||||||||| || ||||   ||||||| ||||| ||||||||||| ||||||||||    
T  43617918 ctgtgtccaaatcaaaagaaccaaatctctatttatagagaaaaaaaaatcatgaattttggt 43617856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 150
Target Start/End: Complemental strand, 17494263 - 17494206
Alignment:
Q  93 tccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    |||||||||||||| ||||| |||||| | ||||  ||||||||||| ||||||||||    
T  17494263 tccaaatcaaatgaaccaagtttctatgtatagacaaaaaaaaatcatgaattttggt 17494206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 150
Target Start/End: Complemental strand, 30529333 - 30529274
Alignment:
Q  90 gtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    |||||||||||| ||||||||||  | | |||||||| |||||||| ||||||||||||||    
T  30529333 gtgtccaaatcagatgatccaagtctttgtttgtaga-gaaaaaaattcacgaattttggt 30529274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 115; Significance: 2e-58; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 14 - 251
Target Start/End: Complemental strand, 13479360 - 13479120
Alignment:
Q  14 tactaaacaaagactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaattttgannnnnnnn----ctgtgtccaaatcaaatgatcc 109  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| |||||            ||||||||||||||||||||||    
T  13479360 tactaaacaaagactaaaacttcaaaataaatgctaataataagattaagagagtgaaaaatttgattttttttttttctgtgtccaaatcaaatgatcc 13479261  T
Q  110 aagattctatttgtagaggaaaaaaaatcacgaattttggtnnnnnnnnnttaaannnnnnnnnnatttgctatgaaataattgagtccaaattattaag 209  Q
    ||| |||||||||||||||||||||||||||||||||||||          | ||          |||||||||||||||||||||||||||||||||||    
T  13479260 aagtttctatttgtagaggaaaaaaaatcacgaattttggtaaaaaaaaaattaattttttttt-atttgctatgaaataattgagtccaaattattaag 13479162  T
Q  210 aaaataaaaattcaagcagccaatcgtaacaagccacgtgtc 251  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  13479161 aaaataaaaattcaagcagccaatcgtaacaagccacgtgtc 13479120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 14 - 251
Target Start/End: Original strand, 39238851 - 39239087
Alignment:
Q  14 tactaaacaaagactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaattttgannnnnnnnctgtgtccaaatcaaatgatccaaga 113  Q
    ||||||||||| |||||||||||||||||||||| |||||||||||||||| |||||||| |||||        |||||||||||||||||||||||||     
T  39238851 tactaaacaaaaactaaaacttcaaaagaaatgcaaataataagattaagagagtgaaaaatttgatttttattctgtgtccaaatcaaatgatccaagt 39238950  T
Q  114 ttctatttgtagaggaaaaaaaa-tcacgaattttggtnnnnnnnnnttaaannnnnnnnnnatttgctatgaaataattgagtccaaattattaagaaa 212  Q
    ||||||||||| |  |||||||| ||||||||||||||          |||           ||||||||||||||||||||||||||||||||||||||    
T  39238951 ttctatttgtaaataaaaaaaaaatcacgaattttggtaaaaaaaaaataa--tttttttttatttgctatgaaataattgagtccaaattattaagaaa 39239048  T
Q  213 ataaaaattcaagcagccaatcgtaacaagccacgtgtc 251  Q
    |||||||| ||||||||||||| ||||||||||||||||    
T  39239049 ataaaaatccaagcagccaatcataacaagccacgtgtc 39239087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 15 - 251
Target Start/End: Complemental strand, 4219181 - 4218954
Alignment:
Q  15 actaaacaaagactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaattttgannnnnnnn-ctgtgtccaaatcaaatgatccaaga 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||         |||||||||||||||||||||||||     
T  4219181 actaaacaaagactaaaacttcaaaagaaatgctaataataagattaagagagtgaaaaatttgatttttttttctgtgtccaaatcaaatgatccaagt 4219082  T
Q  114 ttctatttgtagaggaaaaaaaatcacgaattttggtnnnnnnnnnttaaannnnnnnnnnatttgctatgaaataattgagtccaaattattaagaaaa 213  Q
     ||||||||||||| ||||||||||||||||||||||           |||          |||||| |||||||||||||||||||||||||||||| |    
T  4219081 ctctatttgtagag-aaaaaaaatcacgaattttggtaa---------aaaaaataaaataatttgcaatgaaataattgagtccaaattattaagaaga 4218992  T
Q  214 taaaaattcaagcagccaatcgtaacaagccacgtgtc 251  Q
    ||||||||||||||  |||| |||||||||||||||||    
T  4218991 taaaaattcaagcaaacaattgtaacaagccacgtgtc 4218954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 15 - 251
Target Start/End: Complemental strand, 25670571 - 25670344
Alignment:
Q  15 actaaacaaagactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaattttgannnnnnnnctgtgtccaaatcaaatgatccaagat 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| |         ||||||||||| ||||||||||||      
T  25670571 actaaacaaagactaaaacttcaaaagaaatgctaataataagattaagagagtgaaaaattt-attttttttatgtgtccaaatgaaatgatccaagtc 25670473  T
Q  115 tctatttgtagaggaaaaaaaatcacgaattttggtnnnnnnnnnttaaannnnnnnnnnatttgctatgaaataattgagtccaaattattaagaaaat 214  Q
    ||||||| ||||| ||||||||||| ||||||||||           |||          ||||||||||||||||||||||||||||||||||||| ||    
T  25670472 tctatttatagag-aaaaaaaatcatgaattttggtaaaa-------aaataaataaattatttgctatgaaataattgagtccaaattattaagaagat 25670381  T
Q  215 aaaaattcaagcagccaatcgtaacaagccacgtgtc 251  Q
    |||||| ||||||||||||||||||||||||||||||    
T  25670380 aaaaatccaagcagccaatcgtaacaagccacgtgtc 25670344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 17 - 232
Target Start/End: Original strand, 23089843 - 23090057
Alignment:
Q  17 taaacaaagactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaattttgannnnnnnnctgtgtccaaatcaaatgatccaagattc 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||         |||||||||||| ||||||||||||  ||    
T  23089843 taaacaaagactaaaacttcaaaagaaatgctaataataagattaagagagtgaaaattttggttttttttctgtgtccaaattaaatgatccaagtctc 23089942  T
Q  117 tatttgtagaggaaaaaaaatcacgaattttggtnnnnnnnnnttaaannnnnnnnnnatttgctatgaaataattgagtccaaattattaagaaaataa 216  Q
    |||||||||||||||||||||||| |||||||||          ||||          |||||| |||||||||||||||||||||||||||||| ||||    
T  23089943 tatttgtagaggaaaaaaaatcacaaattttggtaaaaaaaaa-taaaaaattaattaatttgcaatgaaataattgagtccaaattattaagaagataa 23090041  T
Q  217 aaattcaagcagccaa 232  Q
    || | |||||||||||    
T  23090042 aactccaagcagccaa 23090057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 22 - 150
Target Start/End: Original strand, 27945936 - 27946064
Alignment:
Q  22 aaagactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaattttgannnnnnnnctgtgtccaaatcaaatgatccaagattctattt 121  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||         |||||||||||||||||||||||||  |||||||    
T  27945936 aaagactaaaacttcaaaagaaatgctaataataagattaagagagtgaaaattatggttttttttctgtgtccaaatcaaatgatccaagtctctattt 27946035  T
Q  122 gtagaggaaaaaaaatcacgaattttggt 150  Q
     ||||||||||||||||||||||||||||    
T  27946036 atagaggaaaaaaaatcacgaattttggt 27946064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 15 - 150
Target Start/End: Complemental strand, 27405949 - 27405814
Alignment:
Q  15 actaaacaaagactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaattttgannnnnnnnctgtgtccaaatcaaatgatccaagat 114  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||| ||||         ||||||||||||||||||||  |||      
T  27405949 actaaataaagactaaaacttcaaaagaaaagctaataataagattaagagagtgaaaaatttggttttttttctgtgtccaaatcaaatgatttaagtc 27405850  T
Q  115 tctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    ||||||| ||||||||||||||||||||||||||||    
T  27405849 tctatttatagaggaaaaaaaatcacgaattttggt 27405814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 17 - 251
Target Start/End: Original strand, 3455139 - 3455363
Alignment:
Q  17 taaacaaagactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaattttgannnnnnnnctgtgtccaaatcaaatgatccaagattc 116  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||| || ||||| | |||         ||||||||||||||||||||||||  ||    
T  3455139 taaacaaagactaaaacttcaaaagaaattctaattataagattaagagagggaaaaatatgatttttttt-tgtgtccaaatcaaatgatccaagtctc 3455237  T
Q  117 tatttgtagaggaaaaaaaatcacgaattttggtnnnnnnnnnttaaannnnnnnnnnatttgctatgaaataattgagtccaaattattaagaaaataa 216  Q
    ||||| ||||||||||||| | ||||||||||||           |||          |||||| |||||||||||||||||||||||||||||| ||||    
T  3455238 tatttatagaggaaaaaaatt-acgaattttggtaaa--------aaaaataaaaatcatttgcaatgaaataattgagtccaaattattaagaagataa 3455328  T
Q  217 aaattcaagcagccaatcgtaacaagccacgtgtc 251  Q
    |||| ||||||||||||||||||||||||| ||||    
T  3455329 aaatccaagcagccaatcgtaacaagccacatgtc 3455363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 22 - 150
Target Start/End: Complemental strand, 32973144 - 32973015
Alignment:
Q  22 aaagactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaatt-ttgannnnnnnnctgtgtccaaatcaaatgatccaagattctatt 120  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||| | |         |||||||||||||||||||||||||  ||||||    
T  32973144 aaagactaaaacttcaaaagaaatgctaataataagattaagagagtgaaaattatggtttttttttctgtgtccaaatcaaatgatccaagtctctatt 32973045  T
Q  121 tgtagaggaaaaaaaatcacgaattttggt 150  Q
    | ||||| ||||||||||||||||||||||    
T  32973044 tatagagaaaaaaaaatcacgaattttggt 32973015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 175 - 251
Target Start/End: Original strand, 9958149 - 9958225
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatcgtaacaagccacgtgtc 251  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  9958149 atttgctatgaaataattgagtccaaattattaagaagataaaaattcaagcaaccaatcgtaacaagccacgtgtc 9958225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 22 - 150
Target Start/End: Original strand, 40892106 - 40892236
Alignment:
Q  22 aaagactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaatt-ttgannnnnnnnctgtgtccaaatcaaatgatccaagattctatt 120  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||| | |         |||||||||||||||||||||||||  ||||||    
T  40892106 aaagactaaaacttcaaaagaaatgctaataataagattaagagagtgaaaattatggtttttttttctgtgtccaaatcaaatgatccaagtctctatt 40892205  T
Q  121 tgtagag-gaaaaaaaatcacgaattttggt 150  Q
    | |||||  ||||||||||||||||||||||    
T  40892206 tatagagaaaaaaaaaatcacgaattttggt 40892236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 15 - 251
Target Start/End: Complemental strand, 42804549 - 42804323
Alignment:
Q  15 actaaacaaagactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaattttgannnnnnnnctgtgtccaaatcaaatgatccaagat 114  Q
    |||||| ||||||||||||||||||||||| ||||| ||||||||||||| ||||||||  ||||        |||||||||||||||||||| ||||      
T  42804549 actaaataaagactaaaacttcaaaagaaaagctaacaataagattaagagagtgaaaaacttgattttttt-ctgtgtccaaatcaaatgattcaagtc 42804451  T
Q  115 tctatttgtagaggaaaaaaaatcacgaattttggtnnnnnnnnnttaaannnnnnnnnnatttgctatgaaataattgagtccaaattattaagaaaat 214  Q
    ||||||| ||| ||||||||||| ||||||||||||         | |||          |||||| |||||||||||||||||||||||||||||| ||    
T  42804450 tctatttatag-ggaaaaaaaattacgaattttggtaaaaaaaaataaaatt--------atttgcaatgaaataattgagtccaaattattaagaagat 42804360  T
Q  215 aaaaattcaagcagccaatcgtaacaagccacgtgtc 251  Q
    ||||||||||| ||||||||  |||| |||| |||||    
T  42804359 aaaaattcaagtagccaatcaaaacatgccaagtgtc 42804323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 15 - 148
Target Start/End: Complemental strand, 32363222 - 32363088
Alignment:
Q  15 actaaacaaagactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaattttg--annnnnnnnctgtgtccaaatcaaatgatccaag 112  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||| ||||||||  |||           |||||||||||||||||||||||||    
T  32363222 actaaacaaagactaaaacttcaaaagaaatgcttttaataagattaagagagtgaaaaacttggttttttttttctgtgtccaaatcaaatgatccaag 32363123  T
Q  113 attctatttgtagaggaaaaaaaatcacgaattttg 148  Q
      |||||||||||| |||||||||||||||||||||    
T  32363122 tctctatttgtaga-gaaaaaaaatcacgaattttg 32363088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 15 - 234
Target Start/End: Original strand, 39008815 - 39009031
Alignment:
Q  15 actaaacaaagactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaa-ttttgannnnnnnn-ctgtgtccaaatcaaatgatccaag 112  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| |||||          ||||||||||||||||||||||||     
T  39008815 actaaacaaagactaaaacttcaaaagaaatgttaataataagattaagagagtgaaaaattttgttttttttttctgtgtccaaatcaaatgatccaaa 39008914  T
Q  113 attctatttgtagaggaaaaaaaa-tcacgaattttggtnnnnnnnnnttaaannnnnnnnnnatttgctatgaaataattgagtccaaattattaagaa 211  Q
      ||||||| | ||| |||||||| ||||||||||||||           |||          |||||| ||||||||||||||||||||||||||||||    
T  39008915 --tctatttatggagaaaaaaaaaatcacgaattttggtataaaaa----aaaaaattaattaatttgcaatgaaataattgagtccaaattattaagaa 39009008  T
Q  212 aataaaaattcaagcagccaatc 234  Q
     |||||||| |||| ||||||||    
T  39009009 gataaaaatccaagtagccaatc 39009031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 22 - 234
Target Start/End: Original strand, 7651290 - 7651502
Alignment:
Q  22 aaagactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaattttgannnnnnnnctgtgtccaaatcaaatgatccaagattctattt 121  Q
    ||||||||||||||||||||||| ||||||||| |||||||||  |||||||||||||        |||| ||||||||||||||||||||  |||||||    
T  7651290 aaagactaaaacttcaaaagaaaagctaataatgagattaaga--gtgaaaattttgattttttttctgtatccaaatcaaatgatccaagtctctattt 7651387  T
Q  122 gtagaggaaaaaaaa-tcacgaattttggtnnnnnnnnnt-taaannnnnnnnnnatttgctatgaaataattgagtccaaattattaagaaaataaaaa 219  Q
     ||||| |||||||| | ||||||||||||           ||||          |||||| || ||||||||||||||||||||||||||| |||||||    
T  7651388 atagagaaaaaaaaaattacgaattttggtaaaataaaaaataaaatataaaattatttgcaataaaataattgagtccaaattattaagaagataaaaa 7651487  T
Q  220 ttcaagcagccaatc 234  Q
    | |||||| ||||||    
T  7651488 tccaagcatccaatc 7651502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 46 - 150
Target Start/End: Original strand, 42318224 - 42318328
Alignment:
Q  46 gctaataataagattaagatagtgaaaattttgannnnnnnnctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaatt 145  Q
    ||||||||||||||||||| |||||||| |||||        ||||||||||||||||||||  |||  ||||||| ||||| |||||||||||||||||    
T  42318224 gctaataataagattaagagagtgaaaaatttgattttttttctgtgtccaaatcaaatgatttaagtctctatttatagagaaaaaaaaatcacgaatt 42318323  T
Q  146 ttggt 150  Q
    |||||    
T  42318324 ttggt 42318328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 175 - 234
Target Start/End: Original strand, 19241777 - 19241836
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatc 234  Q
    |||||| |||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  19241777 atttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatc 19241836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 175 - 250
Target Start/End: Complemental strand, 30644651 - 30644576
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatcgtaacaagccacgtgt 250  Q
    |||||| |||||||||||||||||||| ||||||||  |||||||||||| |||||||||| |||| |||||||||    
T  30644651 atttgcaatgaaataattgagtccaaaatattaagatgataaaaattcaaccagccaatcgaaacacgccacgtgt 30644576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 88 - 150
Target Start/End: Original strand, 4580390 - 4580452
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    |||||||||||||||||||||||||  ||||||| ||||||||||||||||| ||||||||||    
T  4580390 ctgtgtccaaatcaaatgatccaagtctctatttatagaggaaaaaaaatcatgaattttggt 4580452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 88 - 150
Target Start/End: Complemental strand, 31011769 - 31011707
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    |||||||||||||||||||||||||  ||||||| ||||||||||||||||| ||||||||||    
T  31011769 ctgtgtccaaatcaaatgatccaagtctctatttatagaggaaaaaaaatcatgaattttggt 31011707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 175 - 236
Target Start/End: Complemental strand, 32363065 - 32363004
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatcgt 236  Q
    |||||| |||||||||||||||||||||||||||||| |||||||| |||| ||||||||||    
T  32363065 atttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagtagccaatcgt 32363004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 46 - 150
Target Start/End: Complemental strand, 31008134 - 31008030
Alignment:
Q  46 gctaataataagattaagatagtgaaaattttgannnnnnnnctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaatt 145  Q
    ||||||||| ||||||||| ||||||||  ||||        |||||||||||||||||||||||||  ||||||| ||||| ||||||||| |||||||    
T  31008134 gctaataatgagattaagagagtgaaaaacttgattttttttctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaaattacgaatt 31008035  T
Q  146 ttggt 150  Q
    |||||    
T  31008034 ttggt 31008030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 175 - 234
Target Start/End: Complemental strand, 29616090 - 29616031
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatc 234  Q
    |||||| |||||||||||| ||||||||||||||||| |||||||| |||||||||||||    
T  29616090 atttgcaatgaaataattgggtccaaattattaagaagataaaaatccaagcagccaatc 29616031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 89 - 249
Target Start/End: Complemental strand, 36572090 - 36571931
Alignment:
Q  89 tgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggtnnnnnnnnnttaaannnnnnnnnnatttgctatgaaat 188  Q
    ||||||||||||||||||||||||  ||||||| ||||| ||||||||||||||||||||||          ||||           ||||| |||||||    
T  36572090 tgtgtccaaatcaaatgatccaagtctctatttatagag-aaaaaaaatcacgaattttggtaaaaaaaaaataaaaaaaaaattattttgcaatgaaat 36571992  T
Q  189 aattgagtccaaattattaagaaaataaaaattcaagcagccaatcgtaacaagccacgtg 249  Q
    |||||| |||||| ||||||||  |||||||| |||||||||||||| ||| |||||||||    
T  36571991 aattgaatccaaaatattaagatgataaaaatccaagcagccaatcgaaaccagccacgtg 36571931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 88 - 148
Target Start/End: Original strand, 9958065 - 9958125
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttg 148  Q
    |||||| ||||||||||||||||||  ||||||| ||||||||||||||||| ||||||||    
T  9958065 ctgtgttcaaatcaaatgatccaagtctctatttatagaggaaaaaaaatcaagaattttg 9958125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 88 - 148
Target Start/End: Original strand, 21368635 - 21368695
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttg 148  Q
    ||||||||||||||||||| ||||| |||||||| ||||| ||||||||||| ||||||||    
T  21368635 ctgtgtccaaatcaaatgaaccaagtttctatttatagagaaaaaaaaatcatgaattttg 21368695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 23 - 251
Target Start/End: Original strand, 4938405 - 4938623
Alignment:
Q  23 aagactaaaacttcaaaagaaat--gctaataataagattaagatagtgaaaattttgannnnnnnnctgtgtccaaatcaaatgatccaagattctatt 120  Q
    ||||||||||||||||||||||   ||||||||||||||||||| ||||||||  |||         |||||||||||||||||||||||||  | ||||    
T  4938405 aagactaaaacttcaaaagaaaaaagctaataataagattaagagagtgaaaaacttggttttttttctgtgtccaaatcaaatgatccaagtctttatt 4938504  T
Q  121 tgtagaggaaaaaaaatcacgaattttggtnnnnnnnnnttaaannnnnnnnnnatttgctatgaaataattgagtccaaattattaagaaaataaaaat 220  Q
    | ||||| ||||||||||| ||||||||||           |||          |||||| ||||| ||||||||| |||||||||||||  ||||||||    
T  4938505 tatagag-aaaaaaaatcatgaattttggta----------aaaaataataatcatttgcaatgaa-taattgagttcaaattattaagatgataaaaat 4938592  T
Q  221 tcaagcagccaatcgtaacaagccacgtgtc 251  Q
    | ||||||||||||| |||  ||||||||||    
T  4938593 ttaagcagccaatcgaaacgcgccacgtgtc 4938623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 88 - 150
Target Start/End: Original strand, 25653205 - 25653267
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    ||||||||||||||||||| |||||  ||||||| ||||| ||||||||||| ||||||||||    
T  25653205 ctgtgtccaaatcaaatgaaccaagtctctatttatagagaaaaaaaaatcatgaattttggt 25653267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 88 - 150
Target Start/End: Complemental strand, 29616174 - 29616112
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    ||||||||||||||||||||| |||  ||||||| ||||| ||||||||| ||||||||||||    
T  29616174 ctgtgtccaaatcaaatgatcaaagtctctatttatagagaaaaaaaaattacgaattttggt 29616112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 88 - 150
Target Start/End: Complemental strand, 41152566 - 41152504
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    ||||||||||||||||||| |||||  ||||||| ||||| ||||||||||| ||||||||||    
T  41152566 ctgtgtccaaatcaaatgaaccaagtctctatttatagagaaaaaaaaatcatgaattttggt 41152504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 251
Target Start/End: Complemental strand, 13592517 - 13592448
Alignment:
Q  182 atgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatcgtaacaagccacgtgtc 251  Q
    ||||||||||||||||||||||||||||||  ||||||| | |||||||||||  |||| |||| |||||    
T  13592517 atgaaataattgagtccaaattattaagaagttaaaaatccgagcagccaatcaaaacatgccaagtgtc 13592448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 175 - 232
Target Start/End: Complemental strand, 27405796 - 27405739
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaa 232  Q
    |||||| |||||||||||||||||||| ||||||||  |||||||| |||||||||||    
T  27405796 atttgcaatgaaataattgagtccaaaatattaagatgataaaaatccaagcagccaa 27405739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 175 - 235
Target Start/End: Original strand, 14279289 - 14279349
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatcg 235  Q
    |||||| ||||||||||||||| |||||||||||||  |||||||||||| |||| |||||    
T  14279289 atttgcaatgaaataattgagttcaaattattaagatgataaaaattcaaacagctaatcg 14279349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 175 - 251
Target Start/End: Complemental strand, 31008004 - 31007928
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatcgtaacaagccacgtgtc 251  Q
    |||||| || |||||||||||||||||||||||| || |||||||| |||||| ||||||  |||| |||| |||||    
T  31008004 atttgcaataaaataattgagtccaaattattaaaaagataaaaatccaagcatccaatcaaaacatgccaagtgtc 31007928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 88 - 147
Target Start/End: Original strand, 25033569 - 25033628
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaatttt 147  Q
    ||||||||||||||||||| |||||  ||||||| ||||| ||||||||||| |||||||    
T  25033569 ctgtgtccaaatcaaatgaaccaagtctctatttatagagaaaaaaaaatcatgaatttt 25033628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 234
Target Start/End: Original strand, 42318353 - 42318412
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatc 234  Q
    |||||| |||||||||||||||||||| ||||||||| |||||||| ||  |||||||||    
T  42318353 atttgcaatgaaataattgagtccaaagtattaagaagataaaaatccagccagccaatc 42318412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 88 - 150
Target Start/End: Complemental strand, 8176059 - 8175997
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    |||||||||||| |||||| |||||  ||||||| ||||| ||||||||||| ||||||||||    
T  8176059 ctgtgtccaaattaaatgaaccaagtctctatttatagagaaaaaaaaatcatgaattttggt 8175997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 88 - 150
Target Start/End: Complemental strand, 23648752 - 23648691
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    ||||||||||||||||||||| |||  ||||||| |||| |||||||||| ||||||||||||    
T  23648752 ctgtgtccaaatcaaatgatctaagtctctatttataga-gaaaaaaaattacgaattttggt 23648691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 88 - 150
Target Start/End: Original strand, 23809820 - 23809881
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    ||||||||||||||||||||| |||  ||||||| |||| |||||||||| ||||||||||||    
T  23809820 ctgtgtccaaatcaaatgatctaagtctctatttataga-gaaaaaaaattacgaattttggt 23809881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 176 - 234
Target Start/End: Complemental strand, 34529018 - 34528960
Alignment:
Q  176 tttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatc 234  Q
    ||||| ||||||||||||||| |||||||||||||  ||||||||||| ||||| ||||    
T  34529018 tttgcaatgaaataattgagttcaaattattaagatgataaaaattcaggcagctaatc 34528960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 175 - 220
Target Start/End: Original strand, 27946082 - 27946127
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaat 220  Q
    |||||| |||||||||||||||||||| ||||||||| ||||||||    
T  27946082 atttgcaatgaaataattgagtccaaagtattaagaagataaaaat 27946127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 175 - 220
Target Start/End: Complemental strand, 32972989 - 32972944
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaat 220  Q
    |||||| |||||||||||||||||||| ||||||||| ||||||||    
T  32972989 atttgcaatgaaataattgagtccaaagtattaagaagataaaaat 32972944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 175 - 220
Target Start/End: Original strand, 40892253 - 40892298
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaat 220  Q
    |||||| |||||||||||||||||||| ||||||||| ||||||||    
T  40892253 atttgcaatgaaataattgagtccaaagtattaagaagataaaaat 40892298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 150
Target Start/End: Original strand, 19241692 - 19241752
Alignment:
Q  91 tgtccaaatcaaatgatccaagattctatttgtagag-gaaaaaaaatcacgaattttggt 150  Q
    ||||||||||||||||||||||  ||||||| |||||  ||||||||| ||||||||||||    
T  19241692 tgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaaaattacgaattttggt 19241752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 88 - 150
Target Start/End: Complemental strand, 30644727 - 30644667
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    |||||||||||||||||||||||||  || |||| |||||  |||||||||||||| ||||||    
T  30644727 ctgtgtccaaatcaaatgatccaagtctcaatttatagag--aaaaaaatcacgaagtttggt 30644667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 223
Target Start/End: Original strand, 15973062 - 15973103
Alignment:
Q  182 atgaaataattgagtccaaattattaagaaaataaaaattca 223  Q
    ||||||||||||||| |||||||||||||| | |||||||||    
T  15973062 atgaaataattgagttcaaattattaagaagagaaaaattca 15973103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 251
Target Start/End: Complemental strand, 23648663 - 23648594
Alignment:
Q  182 atgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatcgtaacaagccacgtgtc 251  Q
    |||||||||||   |||||||||||||||| |||||||| | |||||||||||  |||| |||| |||||    
T  23648663 atgaaataattagatccaaattattaagaagataaaaatacgagcagccaatcaaaacatgccaagtgtc 23648594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 251
Target Start/End: Original strand, 23809909 - 23809978
Alignment:
Q  182 atgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatcgtaacaagccacgtgtc 251  Q
    |||||||||||   |||||||||||||||| |||||||| | |||||||||||  |||| |||| |||||    
T  23809909 atgaaataattagatccaaattattaagaagataaaaatacgagcagccaatcaaaacatgccaagtgtc 23809978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 114; Significance: 6e-58; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 14 - 251
Target Start/End: Complemental strand, 45549154 - 45548921
Alignment:
Q  14 tactaaacaaagactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaattttgannnnnnnnctgtgtccaaatcaaatgatccaaga 113  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| |||||        ||||||||||||||||||||||||      
T  45549154 tactaaacaaagactaaaacttcaaaagaaatgataataataagattaagagagtgaaaaatttgattttttttctgtgtccaaatcaaatgatccaaat 45549055  T
Q  114 ttctatttgtagaggaaaaaaaatcacgaattttggtnnnnnnnnnttaaannnnnnnnnnatttgctatgaaataattgagtccaaattattaagaaaa 213  Q
    |||||||||||||| ||||||||||||||||||||||         | |            |||||||||||||||||||||||||||||||||||||||    
T  45549054 ttctatttgtagagaaaaaaaaatcacgaattttggtaaaaaaaaataa----ttttttttatttgctatgaaataattgagtccaaattattaagaaaa 45548959  T
Q  214 taaaaattcaagcagccaatcgtaacaagccacgtgtc 251  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  45548958 taaaaatccaagcagccaatcgtaacaagccacgtgtc 45548921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 17 - 251
Target Start/End: Original strand, 38351923 - 38352152
Alignment:
Q  17 taaacaaagactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaattttgannnnnnnn-ctgtgtccaaatcaaatgatccaagatt 115  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| ||||          ||||||| |||||||||||| ||||  |    
T  38351923 taaacaaagactaaaactttaaaagaaatgctaataataagattaagagagtgaaaaatttggtttttttttctgtgtctaaatcaaatgattcaagtct 38352022  T
Q  116 ctatttgtagaggaaaaaaaatcacgaattttggtnnnnnnnnnttaaannnnnnnnnnatttgctatgaaataattgagtccaaattattaagaaaata 215  Q
    |||||||||||| ||||||||||||||||||||||           |||          |||||| |||||||||||||||||||||||||||||| |||    
T  38352023 ctatttgtagagaaaaaaaaatcacgaattttggtaaaaa------aaaaaattaattaatttgcaatgaaataattgagtccaaattattaagaagata 38352116  T
Q  216 aaaattcaagcagccaatcgtaacaagccacgtgtc 251  Q
    ||||||||||||||||||||||||||||||||||||    
T  38352117 aaaattcaagcagccaatcgtaacaagccacgtgtc 38352152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 15 - 251
Target Start/End: Original strand, 39770034 - 39770263
Alignment:
Q  15 actaaacaaagactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaattttgannnnnnnn---ctgtgtccaaatcaaatgatccaa 111  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||            ||||||||||||||||||||| ||    
T  39770034 actaaacaaagactaaaacttcaaaagaaatgctaataataaaattaagatagtgaaaaatttgttttttttttttctgtgtccaaatcaaatgatctaa 39770133  T
Q  112 gattctatttgtagaggaaaaaaaatcacgaattttggtnnnnnnnnnttaaannnnnnnnnnatttgctatgaaataattgagtccaaattattaagaa 211  Q
    |  ||||||| ||||| | ||||||||||||||||||||           |||          |||||||||||||||||||||||||||||||||||||    
T  39770134 gtctctatttatagag-agaaaaaatcacgaattttggtaa---------aaaaaataaaattatttgctatgaaataattgagtccaaattattaagaa 39770223  T
Q  212 aataaaaattcaagcagccaatcgtaacaagccacgtgtc 251  Q
     |||||||| ||||||||||||||||||||||||||||||    
T  39770224 gataaaaatccaagcagccaatcgtaacaagccacgtgtc 39770263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 15 - 251
Target Start/End: Original strand, 20354565 - 20354795
Alignment:
Q  15 actaaacaaagactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaattttgannnnnnnnctgtgtccaaatcaaatgatccaagat 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||         || ||||||||||||||||| ||||      
T  20354565 actaaacaaagactaaaacttcaaaagaaatgctaataataagattaagagagtgaaaaatttggttttttttctatgtccaaatcaaatgattcaagtc 20354664  T
Q  115 tctatttgtagaggaaaaaaaatcacgaattttggtnnnnnnnnnttaaannnnnnnnnnatttgctatgaaataattgagtccaaattattaagaaaat 214  Q
    ||||| |||||||  |||||||||| ||||||||||           |||          |||||| |||||||||||||||||||||||||||||| ||    
T  20354665 tctatctgtagagtgaaaaaaatcatgaattttggtaaaaa------aaaaaaaaaatgaatttgcaatgaaataattgagtccaaattattaagaagat 20354758  T
Q  215 aaaaattcaagcagccaatcgtaacaagccacgtgtc 251  Q
    |||||||||| ||| |||||||||||| |||||||||    
T  20354759 aaaaattcaaacaggcaatcgtaacaaaccacgtgtc 20354795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 15 - 148
Target Start/End: Original strand, 37952084 - 37952217
Alignment:
Q  15 actaaacaaagactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaattttgannnnnnnnctgtgtccaaatcaaatgatccaagat 114  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||        |||||||||||||||||||| ||||      
T  37952084 actaaataaagactaaaacttcaaaagaaatgctaataataagattaagagagtgaaaattatgattttttttctgtgtccaaatcaaatgattcaagtc 37952183  T
Q  115 tctatttgtagaggaaaaaaaatcacgaattttg 148  Q
    ||||||| ||||| ||||||||||||||||||||    
T  37952184 tctatttatagagaaaaaaaaatcacgaattttg 37952217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 15 - 150
Target Start/End: Original strand, 26815431 - 26815566
Alignment:
Q  15 actaaacaaagactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaattttga-nnnnnnnnctgtgtccaaatcaaatgatccaaga 113  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||||| |||||||| | |||         |||||||||||||||||||||||||     
T  26815431 actaaacaaagactaaaacttcaaaagaaaggctaattataagattaagagagtgaaaaatatgatttttttttctgtgtccaaatcaaatgatccaagt 26815530  T
Q  114 ttctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
     ||||||| |||| |||||||||| ||||||||||||    
T  26815531 ctctatttataga-gaaaaaaaatgacgaattttggt 26815566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 15 - 150
Target Start/End: Complemental strand, 32127016 - 32126881
Alignment:
Q  15 actaaacaaagactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaattttgannnnnnnn-ctgtgtccaaatcaaatgatccaaga 113  Q
    |||||||||||||||||||||||||||||  |||||| |||||||||||| |||||||| | |||         |||||||||||||||||||||||||     
T  32127016 actaaacaaagactaaaacttcaaaagaatggctaattataagattaagagagtgaaaaatatgatttttttttctgtgtccaaatcaaatgatccaagt 32126917  T
Q  114 ttctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
     |||||||||||| |||||||||| ||||||||||||    
T  32126916 ctctatttgtaga-gaaaaaaaattacgaattttggt 32126881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 15 - 150
Target Start/End: Original strand, 32749259 - 32749394
Alignment:
Q  15 actaaacaaagactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaattttga-nnnnnnnnctgtgtccaaatcaaatgatccaaga 113  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| | |||         |||||||||||||||||| ||||||     
T  32749259 actaaacaaagactaaaacttcaaaagaaatgctaattataagattaagagagtgaaaaatatgatttttttttctgtgtccaaatcaaatgttccaagt 32749358  T
Q  114 ttctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
     ||||||| |||| |||||||||| ||||||||||||    
T  32749359 ctctatttataga-gaaaaaaaattacgaattttggt 32749394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 15 - 148
Target Start/End: Original strand, 114982 - 115116
Alignment:
Q  15 actaaacaaagactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaattttgannnnnnnnctgtgtccaaatcaaatgatccaagat 114  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||||  ||||        |||||||||| |||||||||| |||      
T  114982 actaaataaagactaaaacttcaaaagaaaagctaataataagattaagagagtgaaaaacttgatttttttcctgtgtccaagtcaaatgatctaagtc 115081  T
Q  115 tctatttgtagag-gaaaaaaaatcacgaattttg 148  Q
    ||||||| ||||| || ||||||||||||||||||    
T  115082 tctatttatagagagagaaaaaatcacgaattttg 115116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 22 - 150
Target Start/End: Original strand, 36521811 - 36521941
Alignment:
Q  22 aaagactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaatt-ttgannnnnnnnctgtgtccaaatcaaatgatccaagattctatt 120  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||| | |         |||||||||||||||||||||||||  ||||||    
T  36521811 aaagactaaaacttcaaaagaaatgctaataataagattaagagagtgaaaattatggtttttttttctgtgtccaaatcaaatgatccaagtctctatt 36521910  T
Q  121 tgtagag-gaaaaaaaatcacgaattttggt 150  Q
    | || ||  ||||||||||||||||||||||    
T  36521911 tataaagaaaaaaaaaatcacgaattttggt 36521941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 15 - 150
Target Start/End: Original strand, 40690631 - 40690769
Alignment:
Q  15 actaaacaaagactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaattttg---annnnnnnnctgtgtccaaatcaaatgatccaa 111  Q
    |||||| |||||||||||||||||||||||||||||| |||||||||||| |||||||| | ||            ||||||||||||||||||||||||    
T  40690631 actaaataaagactaaaacttcaaaagaaatgctaattataagattaagagagtgaaaaatatggtttttttttttctgtgtccaaatcaaatgatccaa 40690730  T
Q  112 gattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    |  ||||||| | ||| ||||||||| ||||||||||||    
T  40690731 gtctctatttattgagtaaaaaaaattacgaattttggt 40690769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 175 - 234
Target Start/End: Complemental strand, 33508215 - 33508156
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatc 234  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  33508215 atttgcaatgaaataattgagtccaaattattaagaaaataaaaatccaagcagccaatc 33508156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 46 - 234
Target Start/End: Complemental strand, 28317814 - 28317627
Alignment:
Q  46 gctaataataagattaagatagtgaaaattttgannnnnnnnctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaatt 145  Q
    ||||||||||||||||||| ||||||||  ||||        |||||||||||||||||||||||||  ||||||| ||||| ||||||||| |||||||    
T  28317814 gctaataataagattaagagagtgaaaaacttgattttttttctgtgtccaaatcaaatgatccaagtctctatttatagag-aaaaaaaattacgaatt 28317716  T
Q  146 ttggtnnnnnnnnnttaaannnnnnnnnnatttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatc 234  Q
    |||||           |||          |||||| || ||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  28317715 ttggtaaaaaaaaaaaaaaaaaaaaaattatttgcaataaaataattgagtccaaattattaagaagataaaaatccaagcagccaatc 28317627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 175 - 234
Target Start/End: Original strand, 42882058 - 42882117
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatc 234  Q
    |||||| |||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  42882058 atttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatc 42882117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 175 - 234
Target Start/End: Complemental strand, 47159017 - 47158958
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatc 234  Q
    |||||| |||||||||||| |||||||||||||||||||||||||| |||||||||||||    
T  47159017 atttgcaatgaaataattgggtccaaattattaagaaaataaaaatccaagcagccaatc 47158958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 15 - 73
Target Start/End: Original strand, 38970356 - 38970414
Alignment:
Q  15 actaaacaaagactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaa 73  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  38970356 actaaataaagactaaaacttcaaaagaaaagctaataataagattaagagagtgaaaa 38970414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 43201692 - 43201644
Alignment:
Q  25 gactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaa 73  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  43201692 gactaaaacttcaaaagaaaagctaataataagattaagatagtgaaaa 43201644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 88 - 150
Target Start/End: Complemental strand, 30630326 - 30630264
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    |||||||||||||||||||||||||  ||||||| ||||| ||||||||||| ||||||||||    
T  30630326 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaaatcatgaattttggt 30630264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 175 - 240
Target Start/End: Original strand, 115144 - 115209
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatcgtaaca 240  Q
    |||||| |||||||||||||||||||| ||||||||  ||||||||  ||||||||||||||||||    
T  115144 atttgcaatgaaataattgagtccaaaatattaagatgataaaaatcgaagcagccaatcgtaaca 115209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 89 - 150
Target Start/End: Original strand, 48985265 - 48985326
Alignment:
Q  89 tgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    ||||||||||||||||||||||||  ||||||| ||||| ||||||||||| ||||||||||    
T  48985265 tgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaaatcatgaattttggt 48985326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 175 - 227
Target Start/End: Original strand, 22660330 - 22660382
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagca 227  Q
    |||||| |||||||||||||||||||||||||||||| |||||||| ||||||    
T  22660330 atttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagca 22660382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 46 - 150
Target Start/End: Original strand, 42881943 - 42882047
Alignment:
Q  46 gctaataataagattaagatagtgaaaattttgannnnnnnnctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaatt 145  Q
    |||||| |||||||||||| ||||||||  ||||        ||||||||||||||||||||||||   ||||||| ||||||||||||||| || ||||    
T  42881943 gctaatgataagattaagagagtgaaaaacttgattttttttctgtgtccaaatcaaatgatccaaatctctatttatagaggaaaaaaaattacaaatt 42882042  T
Q  146 ttggt 150  Q
    |||||    
T  42882043 ttggt 42882047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 175 - 234
Target Start/End: Original strand, 26815590 - 26815649
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatc 234  Q
    |||||| |||||||||||||||||||||||||||||| |||||||| ||  |||||||||    
T  26815590 atttgcaatgaaataattgagtccaaattattaagaagataaaaatccagccagccaatc 26815649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 175 - 234
Target Start/End: Original strand, 32749409 - 32749468
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatc 234  Q
    |||||| |||||||||||||||||||||||||||||| |||||||| ||  |||||||||    
T  32749409 atttgcaatgaaataattgagtccaaattattaagaagataaaaatccagtcagccaatc 32749468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 185 - 248
Target Start/End: Complemental strand, 33078401 - 33078338
Alignment:
Q  185 aaataattgagtccaaattattaagaaaataaaaattcaagcagccaatcgtaacaagccacgt 248  Q
    ||||||||||||||||| ||||||||  |||||||||||||||| |||||| ||| ||||||||    
T  33078401 aaataattgagtccaaaatattaagatgataaaaattcaagcagtcaatcgaaaccagccacgt 33078338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 175 - 234
Target Start/End: Original strand, 37952243 - 37952302
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatc 234  Q
    |||||| |||||||||||||||||||||||||||||| |||||||| ||  |||||||||    
T  37952243 atttgcaatgaaataattgagtccaaattattaagaagataaaaatccagccagccaatc 37952302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 175 - 234
Target Start/End: Original strand, 40690795 - 40690854
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatc 234  Q
    |||||| |||||||||||||||||||||||||||||| |||||||| ||  |||||||||    
T  40690795 atttgcaatgaaataattgagtccaaattattaagaagataaaaatccagccagccaatc 40690854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 88 - 150
Target Start/End: Original strand, 22194613 - 22194675
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    |||||||||||||||||||||||||  | ||||| |||| |||||||||||| ||||||||||    
T  22194613 ctgtgtccaaatcaaatgatccaagtctttatttatagatgaaaaaaaatcatgaattttggt 22194675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 88 - 150
Target Start/End: Original strand, 37888220 - 37888282
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    ||||||||||||||||||||| ||   ||||||| ||||| ||||||||||||||||||||||    
T  37888220 ctgtgtccaaatcaaatgatctaaatctctatttatagagaaaaaaaaatcacgaattttggt 37888282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 176 - 249
Target Start/End: Original strand, 30567075 - 30567148
Alignment:
Q  176 tttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatcgtaacaagccacgtg 249  Q
    ||||| ||||||||||| |||||||| ||||||||  |||||||| ||| |||||||||| ||| |||||||||    
T  30567075 tttgcaatgaaataattaagtccaaaatattaagatgataaaaatccaaacagccaatcgaaaccagccacgtg 30567148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 88 - 148
Target Start/End: Complemental strand, 33508293 - 33508235
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttg 148  Q
    |||||||||||||||||||||||||  ||||||| |||||  |||||||||||||||||||    
T  33508293 ctgtgtccaaatcaaatgatccaagtctctatttatagag--aaaaaaatcacgaattttg 33508235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 251
Target Start/End: Original strand, 37888304 - 37888373
Alignment:
Q  182 atgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatcgtaacaagccacgtgtc 251  Q
    ||||||||||||| |||||| ||||||||  ||||||||| ||||||||||| | ||| |||||||||||    
T  37888304 atgaaataattgaatccaaaatattaagatgataaaaatttaagcagccaatagaaaccagccacgtgtc 37888373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 150
Target Start/End: Complemental strand, 40300666 - 40300560
Alignment:
Q  46 gctaataataagattaagatagtgaaaattttgannnnnnnnctgtgtccaaatcaaatgatccaagattctatttgt--agaggaaaaaaaatcacgaa 143  Q
    ||||||||||||||||||| | ||||||  ||||        |||||||||||||||||||||||||  ||||||| |  |||| ||||||||| |||||    
T  40300666 gctaataataagattaagagaatgaaaaacttgattttttttctgtgtccaaatcaaatgatccaagtctctatttatagagagaaaaaaaaattacgaa 40300567  T
Q  144 ttttggt 150  Q
    |||||||    
T  40300566 ttttggt 40300560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 234
Target Start/End: Complemental strand, 43201543 - 43201484
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatc 234  Q
    |||||| ||||||||||||||| |||||||||||||  | |||||| |||||||||||||    
T  43201543 atttgcaatgaaataattgagttcaaattattaagatgagaaaaatccaagcagccaatc 43201484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 88 - 150
Target Start/End: Original strand, 5813659 - 5813721
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    ||||||||||||||||||| |||||  ||||||| ||||| ||||||||| | ||||||||||    
T  5813659 ctgtgtccaaatcaaatgaaccaagtctctatttatagagaaaaaaaaattatgaattttggt 5813721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 88 - 150
Target Start/End: Original strand, 30720500 - 30720561
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    ||||||||||||||||||||| |||  ||||||| |||| |||||||||| ||||||||||||    
T  30720500 ctgtgtccaaatcaaatgatctaagtctctatttataga-gaaaaaaaattacgaattttggt 30720561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 175 - 234
Target Start/End: Original strand, 30720584 - 30720645
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaat--aaaaattcaagcagccaatc 234  Q
    |||||| |||||||||||| ||||||||||||||||| ||  |||||||| |||||||||||    
T  30720584 atttgcaatgaaataattgggtccaaattattaagaagataaaaaaattcgagcagccaatc 30720645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 88 - 150
Target Start/End: Complemental strand, 33078495 - 33078433
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    ||||||||||||||||||||| |||  ||||||| ||||| |||| |||||| ||||||||||    
T  33078495 ctgtgtccaaatcaaatgatcaaagtctctatttatagagaaaaagaaatcatgaattttggt 33078433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 88 - 150
Target Start/End: Original strand, 37888761 - 37888822
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    ||||||||||||||||||| |||||  ||||||| |||| |||||||||||| ||||||||||    
T  37888761 ctgtgtccaaatcaaatgaaccaagtctctatttataga-gaaaaaaaatcatgaattttggt 37888822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 88 - 150
Target Start/End: Complemental strand, 47159100 - 47159038
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    ||||||||| |||||||||| ||||  ||||||| ||||| ||||||||| ||||||||||||    
T  47159100 ctgtgtccacatcaaatgattcaagtctctatttatagagaaaaaaaaattacgaattttggt 47159038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 175 - 220
Target Start/End: Original strand, 36521967 - 36522012
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaat 220  Q
    |||||| |||||||||||||||||||| ||||||||| ||||||||    
T  36521967 atttgcaatgaaataattgagtccaaagtattaagaagataaaaat 36522012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 175 - 251
Target Start/End: Original strand, 38970508 - 38970584
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatcgtaacaagccacgtgtc 251  Q
    |||||| ||||||||||| ||| |||||||||||||  ||||||||  || |||||||||| |||  ||||||||||    
T  38970508 atttgcaatgaaataatttagttcaaattattaagatgataaaaatataaacagccaatcgaaacgcgccacgtgtc 38970584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 88 - 150
Target Start/End: Complemental strand, 35028511 - 35028448
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagag-gaaaaaaaatcacgaattttggt 150  Q
    ||||||||||||||||||| |||||  ||||||| |||||  ||||||||||| ||||||||||    
T  35028511 ctgtgtccaaatcaaatgaaccaagtctctatttatagagaaaaaaaaaatcatgaattttggt 35028448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 150
Target Start/End: Original strand, 33379667 - 33379726
Alignment:
Q  89 tgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    |||||||||||||||||| |||||  ||||||| |||||  |||||||||| ||||||||||    
T  33379667 tgtgtccaaatcaaatgaaccaagtctctatttatagag--aaaaaaatcatgaattttggt 33379726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 150
Target Start/End: Complemental strand, 43570833 - 43570771
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    ||||||||||||||||||| |||||  ||||||| ||||  ||| ||||||| ||||||||||    
T  43570833 ctgtgtccaaatcaaatgaaccaagtctctatttatagacaaaataaaatcatgaattttggt 43570771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 89 - 150
Target Start/End: Original strand, 24793818 - 24793878
Alignment:
Q  89 tgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    ||||||||||||||| || |||||  ||||||| |||| |||||||||||| ||||||||||    
T  24793818 tgtgtccaaatcaaacgaaccaagtctctatttataga-gaaaaaaaatcatgaattttggt 24793878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 113; Significance: 3e-57; HSPs: 86)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 14 - 251
Target Start/End: Original strand, 51304865 - 51305102
Alignment:
Q  14 tactaaacaaagactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaattttgannnnnnnn--ctgtgtccaaatcaaatgatccaa 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||          ||||||||||||||||||||||||    
T  51304865 tactaaacaaagactaaaacttcaaaagaaatgctaataataagattaagagagtgaaaaatttgattttttttttctgtgtccaaatcaaatgatccaa 51304964  T
Q  112 gattctatttgtagaggaaaaaaaatcacgaattttggtnnnnnnnnnttaaannnnnnnnnnatttgctatgaaataattgagtccaaattattaagaa 211  Q
    | |||||||||||||||||||||||||||||||||||||          ||            |||||||||||||||||||||||||||||||||||||    
T  51304965 gtttctatttgtagaggaaaaaaaatcacgaattttggtaaaaaaaaaata--ttttttttttatttgctatgaaataattgagtccaaattattaagaa 51305062  T
Q  212 aataaaaattcaagcagccaatcgtaacaagccacgtgtc 251  Q
    ||||||||| ||||||||||||||||||||| ||||||||    
T  51305063 aataaaaatccaagcagccaatcgtaacaagtcacgtgtc 51305102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 14 - 251
Target Start/End: Complemental strand, 36178245 - 36178011
Alignment:
Q  14 tactaaacaaagactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaattttgannnnnnnnctgtgtccaaatcaaatgatccaaga 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| |||||         ||||||||||||||||||||||||     
T  36178245 tactaaacaaagactaaaacttcaaaagaaatgctaataataagatcaagaaagtgaaaaatttgattttttt--tgtgtccaaatcaaatgatccaagt 36178148  T
Q  114 ttctatttgtagaggaaaaaaaatcacgaattttggtnnnnnnnnnttaaannnnnnnnnnatttgctatgaaataattgagtccaaattattaagaaaa 213  Q
    |||||||||||||| ||||||||||||||||||||||           |||          ||||||||| ||||||||||||||||||||||||||| |    
T  36178147 ttctatttgtagagaaaaaaaaatcacgaattttggtaaaaaaataa-aaaaaataaaattatttgctataaaataattgagtccaaattattaagaaga 36178049  T
Q  214 taaaaattcaagcagccaatcgtaacaagccacgtgtc 251  Q
    ||||||| ||||||||||||||||||||||||| ||||    
T  36178048 taaaaatccaagcagccaatcgtaacaagccacatgtc 36178011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 15 - 251
Target Start/End: Complemental strand, 51999831 - 51999601
Alignment:
Q  15 actaaacaaagactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaattttgannnnnnnn--ctgtgtccaaatcaaatgatccaag 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||           |||||||||||| ||||||||||||    
T  51999831 actaaacaaagactaaaacttcaaaagaaatgctaataataagattaagagagtgaaaattttggttttttttttctgtgtccaaatgaaatgatccaag 51999732  T
Q  113 attct--atttgtagaggaaaaaaaatcacgaattttggtnnnnnnnnnttaaannnnnnnnnnatttgctatgaaataattgagtccaaattattaaga 210  Q
      |||  |||| ||||| ||||||||||||||||||||||           |||          ||||||||||||||||||||||||||||||||||||    
T  51999731 tctctctatttatagagaaaaaaaaatcacgaattttggta----------aaaaaataaaattatttgctatgaaataattgagtccaaattattaaga 51999642  T
Q  211 aaataaaaattcaagcagccaatcgtaacaagccacgtgtc 251  Q
    | |||||||| ||||||||||||||||||||||||||||||    
T  51999641 agataaaaatccaagcagccaatcgtaacaagccacgtgtc 51999601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 15 - 236
Target Start/End: Original strand, 12975137 - 12975353
Alignment:
Q  15 actaaacaaagactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaattttgannnnnnnnctgtgtccaaatcaaatgatccaagat 114  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||| ||||||||  ||||        |||||||||||||||||||||||||      
T  12975137 actaaacaaagactaaaacttcaaaagaaatgcttttaataagattaagagagtgaaaaacttgattttttttctgtgtccaaatcaaatgatccaagtc 12975236  T
Q  115 tctatttgtagaggaaaaaaaatcacgaattttggtnnnnnnnnnttaaannnnnnnnnnatttgctatgaaataattgagtccaaattattaagaaaat 214  Q
    ||||||||||||| |||| |||||||||||||||||          ||||          |||||| |||||||||||||||||||||||||||||| ||    
T  12975237 tctatttgtagagaaaaataaatcacgaattttggtaaaaa-----taaaaataaaaattatttgcaatgaaataattgagtccaaattattaagaagat 12975331  T
Q  215 aaaaattcaagcagccaatcgt 236  Q
    |||||| |||||||||||||||    
T  12975332 aaaaatccaagcagccaatcgt 12975353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 15 - 236
Target Start/End: Complemental strand, 48886594 - 48886376
Alignment:
Q  15 actaaacaaagactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaattttgannnnnnnnctgtgtccaaatcaaatgatccaagat 114  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||| ||||||||  |||         ||||||||||||||||||||| |||      
T  48886594 actaaacaaagactaaaacttcaaaagaaatgcttttaataagattaagagagtgaaaaacttggttttttttctgtgtccaaatcaaatgatcaaagtc 48886495  T
Q  115 tctatttgtagaggaaaaaaaatcacgaattttggtnnnnnnnnnttaaannnnnnnnnnatttgctatgaaataattgagtccaaattattaagaaaat 214  Q
    ||||||||||||| ||||||||||||||||||||||          ||||          |||||| |||||||||| ||||||||||||||||||| ||    
T  48886494 tctatttgtagagaaaaaaaaatcacgaattttggtaaaaaataaataaa---taaaattatttgcaatgaaataatcgagtccaaattattaagaagat 48886398  T
Q  215 aaaaattcaagcagccaatcgt 236  Q
    |||||| |||||||||||||||    
T  48886397 aaaaatccaagcagccaatcgt 48886376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 15 - 150
Target Start/End: Complemental strand, 35472079 - 35471942
Alignment:
Q  15 actaaacaaagactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaattttgannnnnnnnctgtgtccaaatcaaatgatccaagat 114  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| | |||        |||||||||||||||||||||||||      
T  35472079 actaaacaaagactaaaacttcaaaagaaatgctaattataagattaagagagtgaaaaatatgattttttttctgtgtccaaatcaaatgatccaagtc 35471980  T
Q  115 tctatttgtagag--gaaaaaaaatcacgaattttggt 150  Q
    |||||||||||||  |||||||||| ||||||||||||    
T  35471979 tctatttgtagagaagaaaaaaaattacgaattttggt 35471942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 15 - 232
Target Start/End: Original strand, 11908344 - 11908556
Alignment:
Q  15 actaaacaaagactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaattttg--annnnnnnnctgtgtccaaatcaaatgatccaag 112  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||           |||||||||||||||||||||||||    
T  11908344 actaaagaaagactaaaacttcaaaagaaatgctaataataagattaagagagtgaaaaatttggttttttttttctgtgtccaaatcaaatgatccaag 11908443  T
Q  113 attctatttgtagaggaaaaaaaatcacgaattttggtnnnnnnnnnttaaannnnnnnnnnatttgctatgaaataattgagtccaaattattaagaaa 212  Q
      |||||||||||||| |||||||||||||||||||||           |||          |||||| ||||||||||||||||||||||||||||||     
T  11908444 tctctatttgtagagg-aaaaaaatcacgaattttggtataaa------aaaaaattaattaatttgcaatgaaataattgagtccaaattattaagaag 11908536  T
Q  213 ataaaaattcaagcagccaa 232  Q
    |||||||| |||||||||||    
T  11908537 ataaaaatccaagcagccaa 11908556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 22 - 150
Target Start/End: Complemental strand, 30415217 - 30415088
Alignment:
Q  22 aaagactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaatt-ttgannnnnnnnctgtgtccaaatcaaatgatccaagattctatt 120  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||| | |         |||||||||||||||||||||||||  ||||||    
T  30415217 aaagactaaaacttcaaaagaaatgctaataataagattaagagagtgaaaattatggtttttttttctgtgtccaaatcaaatgatccaagtctctatt 30415118  T
Q  121 tgtagaggaaaaaaaatcacgaattttggt 150  Q
    | ||||| ||||||||||||||||||||||    
T  30415117 tatagagaaaaaaaaatcacgaattttggt 30415088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 15 - 150
Target Start/End: Complemental strand, 31170028 - 31169894
Alignment:
Q  15 actaaacaaagactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaattttga-nnnnnnnnctgtgtccaaatcaaatgatccaaga 113  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||  ||||         |||||||||||||||||||||||||     
T  31170028 actaaacaaagactaaaacttcaagagaaatgctaataataagattaagagagtgaaaaacttgatttttttttctgtgtccaaatcaaatgatccaagt 31169929  T
Q  114 ttctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
     |||||||||||||  |||||||||||||||||||||    
T  31169928 ctctatttgtagag--aaaaaaatcacgaattttggt 31169894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 15 - 150
Target Start/End: Complemental strand, 49027181 - 49027043
Alignment:
Q  15 actaaacaaagactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaattttg--annnnnnnnctgtgtccaaatcaaatgatccaag 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||           |||||||||||||||||||||||||    
T  49027181 actaaacaaagactaaaacttcaaaagaaatgctaataataagattaagagagtgaaaaatttggttttttttttctgtgtccaaatcaaatgatccaag 49027082  T
Q  113 attctatttgtagag-gaaaaaaaatcacgaattttggt 150  Q
      ||||| ||||||| || ||||||||||||||||||||    
T  49027081 tctctatctgtagagagagaaaaaatcacgaattttggt 49027043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 22 - 251
Target Start/End: Original strand, 6832927 - 6833157
Alignment:
Q  22 aaagactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaattttgannnnnnnn--ctgtgtccaaatcaaatgatccaagattctat 119  Q
    ||||||||| ||||||||||||| ||||||||||||||||||| ||||||||  |||           |||||| ||||||||||||||||||  |||||    
T  6832927 aaagactaatacttcaaaagaaaagctaataataagattaagagagtgaaaaacttggttttttttttctgtgttcaaatcaaatgatccaagtctctat 6833026  T
Q  120 ttgtagaggaaaaaaaatcacgaattttggtnnnnnnnnnt-taaannnnnnnnnnatttgctatgaaataattgagtccaaattattaagaaaataaaa 218  Q
    ||||||||  |||||||||||||||||||||           ||||          |||||| |||||||||||||||||||||||||||||| ||||||    
T  6833027 ttgtagag--aaaaaaatcacgaattttggtaaaataaaaaataaaaaaaataaaaatttgcaatgaaataattgagtccaaattattaagaagataaaa 6833124  T
Q  219 attcaagcagccaatcgtaacaagccacgtgtc 251  Q
    || ||||||||||||||||||| ||||||||||    
T  6833125 atccaagcagccaatcgtaacatgccacgtgtc 6833157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 15 - 150
Target Start/End: Complemental strand, 26162301 - 26162166
Alignment:
Q  15 actaaacaaagactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaattttgannnnnnnnctgtgtccaaatcaaatgatccaagat 114  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||||| |||||| | | |||        |||||||||||||||||||||||||      
T  26162301 actaaacaaagactaaaacttcaaaagaaaggctaattataagattaagagagtgaagaatatgattttttttctgtgtccaaatcaaatgatccaagtc 26162202  T
Q  115 tctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    ||||||| |||||  |||||||| ||||||||||||    
T  26162201 tctatttatagagagaaaaaaatgacgaattttggt 26162166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 15 - 148
Target Start/End: Complemental strand, 46137034 - 46136902
Alignment:
Q  15 actaaacaaagactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaattttgannnnnnnnctgtgtccaaatcaaatgatccaagat 114  Q
    |||||| |||||||||||||||||||||||||||||||| |||||||||| ||||||||  ||||        || |||||||||||||| |||||||      
T  46137034 actaaataaagactaaaacttcaaaagaaatgctaataaaaagattaagagagtgaaaaacttgattttttttctatgtccaaatcaaattatccaagtc 46136935  T
Q  115 tctatttgtagaggaaaaaaaatcacgaattttg 148  Q
    ||||||| |||| |||||||||||||||||||||    
T  46136934 tctatttataga-gaaaaaaaatcacgaattttg 46136902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 22 - 150
Target Start/End: Original strand, 27847896 - 27848029
Alignment:
Q  22 aaagactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaatt----ttgannnnnnnnctgtgtccaaatcaaatgatccaagattct 117  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||    ||          ||||||| |||||||||||||||||  |||    
T  27847896 aaagactaaaacttcaaaagaaatgctaataataagattaagagagtgaaaattatggttttttttttttctgtgtcaaaatcaaatgatccaagtctct 27847995  T
Q  118 atttgtagagg-aaaaaaaatcacgaattttggt 150  Q
    |||| |||||| ||||||||||||||||||||||    
T  27847996 atttatagaggaaaaaaaaatcacgaattttggt 27848029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 15 - 150
Target Start/End: Complemental strand, 50415571 - 50415435
Alignment:
Q  15 actaaacaaagactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaattttgannnnnnnnctgtgtccaaatcaaatgatccaagat 114  Q
    |||||| ||||||||||| ||||||||||||||||||||||||||||||| |||||||||| ||         ||||||||||||||||||||||||       
T  50415571 actaaataaagactaaaatttcaaaagaaatgctaataataagattaagagagtgaaaattatggttttttttctgtgtccaaatcaaatgatccaaatc 50415472  T
Q  115 tctatttgtagagg--aaaaaaaatcacgaattttggt 150  Q
    |||| || ||||||  ||||||||||| ||||||||||    
T  50415471 tcta-ttatagaggaaaaaaaaaatcatgaattttggt 50415435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 22 - 251
Target Start/End: Original strand, 29701970 - 29702200
Alignment:
Q  22 aaagactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaattttgannnnnnnnctgtgtccaaatcaaatgatccaagattctattt 121  Q
    ||||||||||||||||||||||| ||||||||| ||||||||| ||||||||  ||||        |||| ||||||||||||||||||||  |||||||    
T  29701970 aaagactaaaacttcaaaagaaaagctaataatgagattaagagagtgaaaaacttgattttttttctgtatccaaatcaaatgatccaagtctctattt 29702069  T
Q  122 gtagaggaaaaaaaatcacgaattttggtnnnnnnnnnt-taaannnnnnnnnnatttgctatgaaataattgagtccaaattattaagaaaataaaaat 220  Q
     |||||  |||||||| ||||||||||||           ||||          |||||| || ||||||||||||||||||||||||||| ||||||||    
T  29702070 atagagagaaaaaaattacgaattttggtaaaataaaaaataaaataaaaaattatttgcaataaaataattgagtccaaattattaagaagataaaaat 29702169  T
Q  221 tcaagcagccaatcgtaacaagccacgtgtc 251  Q
     |||||| ||||||  |||| |||| |||||    
T  29702170 ccaagcatccaatcaaaacatgccaagtgtc 29702200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 46 - 150
Target Start/End: Original strand, 50734355 - 50734459
Alignment:
Q  46 gctaataataagattaagatagtgaaaattttgannnnnnnnctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaatt 145  Q
    ||||||||||||||||||| |||||||| |||||        |||||||||||||||||||||||||  ||||||| ||||| ||||||||| |||||||    
T  50734355 gctaataataagattaagagagtgaaaaatttgattttttttctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaaattacgaatt 50734454  T
Q  146 ttggt 150  Q
    |||||    
T  50734455 ttggt 50734459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 46 - 150
Target Start/End: Complemental strand, 50778500 - 50778396
Alignment:
Q  46 gctaataataagattaagatagtgaaaattttgannnnnnnnctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaatt 145  Q
    ||||||||||||||||||| |||||||| |||||        |||||||||||||||||||||||||  ||||||| ||||| ||||||||| |||||||    
T  50778500 gctaataataagattaagagagtgaaaaatttgattttttttctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaaattacgaatt 50778401  T
Q  146 ttggt 150  Q
    |||||    
T  50778400 ttggt 50778396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 46 - 234
Target Start/End: Complemental strand, 6045063 - 6044875
Alignment:
Q  46 gctaataataagattaagatagtgaaaattttgannnnnnnnctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaatt 145  Q
    |||||| |||||||||||| ||||||||  ||||        |||||||||||||||||||||||||  ||||||| ||||| ||||||||| |||||||    
T  6045063 gctaatgataagattaagagagtgaaaaacttgattttttttctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaaattacgaatt 6044964  T
Q  146 ttggtnnnnnnnnnttaaannnnnnnnnnatttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatc 234  Q
    |||||           |||          |||||| |||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  6044963 ttggtaaaaaaaaaaaaaaaaaaaaaattatttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatc 6044875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 175 - 251
Target Start/End: Complemental strand, 33187714 - 33187638
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatcgtaacaagccacgtgtc 251  Q
    |||||| |||||||||||||||||||||||||||||| |||||||| |||||||||||||  |||| |||| |||||    
T  33187714 atttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatcaaaacatgccaagtgtc 33187638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 88 - 150
Target Start/End: Complemental strand, 4873846 - 4873784
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    |||||||||||||||||||||||||  ||||||| ||||| ||||||||||||||||||||||    
T  4873846 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaaatcacgaattttggt 4873784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 88 - 150
Target Start/End: Complemental strand, 25787448 - 25787386
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    |||||||||||||||||||||||||  ||||||| ||||||||||||||||| ||||||||||    
T  25787448 ctgtgtccaaatcaaatgatccaagtctctatttatagaggaaaaaaaatcatgaattttggt 25787386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 88 - 150
Target Start/End: Complemental strand, 25829405 - 25829343
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    |||||||||||||||||||||||||  ||||||| ||||||||||||||||| ||||||||||    
T  25829405 ctgtgtccaaatcaaatgatccaagtctctatttatagaggaaaaaaaatcatgaattttggt 25829343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 88 - 150
Target Start/End: Complemental strand, 33934935 - 33934873
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    |||||||||||||||||||||||||  ||||||| ||||||||||||||||| ||||||||||    
T  33934935 ctgtgtccaaatcaaatgatccaagtctctatttatagaggaaaaaaaatcatgaattttggt 33934873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 88 - 150
Target Start/End: Complemental strand, 42598103 - 42598041
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    |||||||||||||||||||||||||  ||||||| ||||||||||||||||| ||||||||||    
T  42598103 ctgtgtccaaatcaaatgatccaagtctctatttatagaggaaaaaaaatcatgaattttggt 42598041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 15 - 73
Target Start/End: Original strand, 43475723 - 43475781
Alignment:
Q  15 actaaacaaagactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaa 73  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  43475723 actaaataaagactaaaacttcaaaagaaaagctaataataagattaagagagtgaaaa 43475781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 182 - 251
Target Start/End: Complemental strand, 4873765 - 4873696
Alignment:
Q  182 atgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatcgtaacaagccacgtgtc 251  Q
    |||||||||||||||||||||||||||||| |||||||| |||||||||||||  |||| |||| |||||    
T  4873765 atgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatcaaaacatgccaagtgtc 4873696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 182 - 234
Target Start/End: Complemental strand, 10424257 - 10424205
Alignment:
Q  182 atgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatc 234  Q
    |||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  10424257 atgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatc 10424205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 175 - 251
Target Start/End: Original strand, 42564413 - 42564489
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatcgtaacaagccacgtgtc 251  Q
    |||||| |||||||||||| ||||||||||||||||| |||||||| |||||||||||||  |||| |||| |||||    
T  42564413 atttgcaatgaaataattgggtccaaattattaagaagataaaaatccaagcagccaatcaaaacatgccatgtgtc 42564489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 175 - 238
Target Start/End: Original strand, 20140025 - 20140088
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatcgtaa 238  Q
    |||||| |||||||||||||||| ||||||||||||| |||||||| |||||||| ||||||||    
T  20140025 atttgcaatgaaataattgagtctaaattattaagaagataaaaatccaagcagcgaatcgtaa 20140088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 175 - 234
Target Start/End: Complemental strand, 32120039 - 32119980
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatc 234  Q
    |||||| |||||||||||| ||||||||||||||||| |||||||| |||||||||||||    
T  32120039 atttgcaatgaaataattgggtccaaattattaagaagataaaaatccaagcagccaatc 32119980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 88 - 150
Target Start/End: Complemental strand, 25450173 - 25450111
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    ||||||||||||||||||| |||||  ||||||| ||||||||||||||||| ||||||||||    
T  25450173 ctgtgtccaaatcaaatgaaccaagtctctatttatagaggaaaaaaaatcatgaattttggt 25450111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 88 - 150
Target Start/End: Complemental strand, 32120127 - 32120065
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    |||||||||||||||||||||||||  ||||||| ||||| ||||||||| ||||||||||||    
T  32120127 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaaattacgaattttggt 32120065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 15 - 73
Target Start/End: Complemental strand, 35540331 - 35540273
Alignment:
Q  15 actaaacaaagactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaa 73  Q
    |||||| ||||| ||||||||||||||||| ||||||||||||||||||| ||||||||    
T  35540331 actaaataaagattaaaacttcaaaagaaaagctaataataagattaagagagtgaaaa 35540273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 88 - 150
Target Start/End: Complemental strand, 38571836 - 38571774
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    |||||||||||||||||||||||||  ||||||| ||||| ||||||||||| ||||||||||    
T  38571836 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaaatcatgaattttggt 38571774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 176 - 234
Target Start/End: Original strand, 41183730 - 41183788
Alignment:
Q  176 tttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatc 234  Q
    ||||| ||||||||||||||||||||||||| |||| ||||||||||||| ||||||||    
T  41183730 tttgcaatgaaataattgagtccaaattattgagaagataaaaattcaaggagccaatc 41183788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 88 - 150
Target Start/End: Original strand, 44084690 - 44084752
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    |||||||||||||||||||||||||  ||||||| ||||| ||||||||| ||||||||||||    
T  44084690 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaaattacgaattttggt 44084752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 48 - 150
Target Start/End: Original strand, 49086477 - 49086579
Alignment:
Q  48 taataataagattaagatagtgaaaattttgannnnnnnnctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaatttt 147  Q
    |||||||||||| |||||||||||||  ||||        ||||||||||||||||||| ||||   ||||||| ||||| |||||||||||||||||||    
T  49086477 taataataagatgaagatagtgaaaaacttgattttttttctgtgtccaaatcaaatgaaccaaatctctatttatagagaaaaaaaaatcacgaatttt 49086576  T
Q  148 ggt 150  Q
    |||    
T  49086577 ggt 49086579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 15 - 73
Target Start/End: Complemental strand, 49407086 - 49407028
Alignment:
Q  15 actaaacaaagactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaa 73  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||||||  |||||||    
T  49407086 actaaataaagactaaaacttcaaaagaaaagctaataataagattaagagggtgaaaa 49407028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 88 - 150
Target Start/End: Original strand, 51436008 - 51436070
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    ||||||||||||||||||||| |||  ||||||| ||||||||||||||||| ||||||||||    
T  51436008 ctgtgtccaaatcaaatgatctaagtctctatttatagaggaaaaaaaatcatgaattttggt 51436070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 15 - 150
Target Start/End: Complemental strand, 33187874 - 33187737
Alignment:
Q  15 actaaacaaagactaaaacttcaaaagaaatgctaataataagattaagatagtg-aaaattttgannnnnnnnctgtgtccaaatcaaatgatccaaga 113  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||| ||| |||| |||| || |         ||||||||||||||||| |||||||     
T  33187874 actaaataaagactaaaacttcaaaagaaaagctaataataagatttagagagtgaaaaacttggtttttttttctgtgtccaaatcaaataatccaagt 33187775  T
Q  114 ttctatttgtagag-gaaaaaaaatcacgaattttggt 150  Q
     ||||||| || ||  ||||||||||| ||||||||||    
T  33187774 ctctatttataaagaaaaaaaaaatcatgaattttggt 33187737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 46 - 150
Target Start/End: Complemental strand, 51998971 - 51998866
Alignment:
Q  46 gctaataataagattaagatagtgaaaattttgannnnnnnnctgtgtccaaatcaaatgatccaagattctatttgtagag-gaaaaaaaatcacgaat 144  Q
    ||||||||||||||||||| ||||||||  ||||        |||||||||||||||||||||||||  ||||||| ||||| || ||||||| ||||||    
T  51998971 gctaataataagattaagagagtgaaaaacttgattttttttctgtgtccaaatcaaatgatccaagtctctatttatagagagagaaaaaattacgaat 51998872  T
Q  145 tttggt 150  Q
    ||||||    
T  51998871 tttggt 51998866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 46 - 150
Target Start/End: Original strand, 20139896 - 20140000
Alignment:
Q  46 gctaataataagattaagatagtgaaaattttgannnnnnnnctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaatt 145  Q
    ||||||||||||||||||| ||||||||  ||||        || ||| ||||||||||||||||||  ||||||| ||||| ||||||||||| |||||    
T  20139896 gctaataataagattaagagagtgaaaaacttgattttttttctctgttcaaatcaaatgatccaagtctctatttatagagaaaaaaaaatcatgaatt 20139995  T
Q  146 ttggt 150  Q
    |||||    
T  20139996 ttggt 20140000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 175 - 246
Target Start/End: Original strand, 15007656 - 15007727
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatcgtaacaagccac 246  Q
    |||||| |||||||||||||||||||| |||| |||  ||||||||| ||||||||||||| ||| ||||||    
T  15007656 atttgcaatgaaataattgagtccaaaatatttagatgataaaaattgaagcagccaatcgaaaccagccac 15007727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 31169874 - 31169823
Alignment:
Q  182 atgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaat 233  Q
    |||||||||| ||||||||||||||||||| |||||||| ||||||||||||    
T  31169874 atgaaataatagagtccaaattattaagaagataaaaatccaagcagccaat 31169823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 175 - 234
Target Start/End: Complemental strand, 35471928 - 35471869
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatc 234  Q
    |||||| |||||||||||||||||||||||||||||| |||||||| ||  |||||||||    
T  35471928 atttgcaatgaaataattgagtccaaattattaagaagataaaaatccagccagccaatc 35471869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 175 - 234
Target Start/End: Complemental strand, 37182679 - 37182620
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatc 234  Q
    |||||| |||||||||||| ||||||||||||||||| |||||||| | |||||||||||    
T  37182679 atttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatc 37182620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 175 - 234
Target Start/End: Original strand, 44084776 - 44084835
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatc 234  Q
    |||||| ||||||||||||  |||||||||||||||| |||||||| |||||||||||||    
T  44084776 atttgcaatgaaataattggttccaaattattaagaagataaaaatccaagcagccaatc 44084835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 88 - 150
Target Start/End: Original strand, 4046502 - 4046564
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    |||||||||||||||||||| ||||  ||||||| ||||| ||||||||| ||||||||||||    
T  4046502 ctgtgtccaaatcaaatgattcaagtctctatttatagagaaaaaaaaattacgaattttggt 4046564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 88 - 150
Target Start/End: Complemental strand, 5844711 - 5844649
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    ||||||||||||||||||| |||||  ||||||| ||||| ||||||||||| ||||||||||    
T  5844711 ctgtgtccaaatcaaatgaaccaagtctctatttatagagaaaaaaaaatcatgaattttggt 5844649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 88 - 150
Target Start/End: Original strand, 7008499 - 7008560
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    |||| ||||||||||||||||||||  ||||||| |||| |||||||||||||||||||||||    
T  7008499 ctgtatccaaatcaaatgatccaagtctctatttataga-gaaaaaaaatcacgaattttggt 7008560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 88 - 150
Target Start/End: Original strand, 17469797 - 17469859
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    ||||||||||||||||||| |||||  ||||||| ||||| ||||||||||| ||||||||||    
T  17469797 ctgtgtccaaatcaaatgaaccaagtctctatttatagagaaaaaaaaatcatgaattttggt 17469859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 88 - 150
Target Start/End: Original strand, 41183652 - 41183713
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    |||||||||||||||||||||||||  ||||||| |||| |||||||||| ||||||||||||    
T  41183652 ctgtgtccaaatcaaatgatccaagtctctatttataga-gaaaaaaaattacgaattttggt 41183713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 46 - 148
Target Start/End: Original strand, 42564285 - 42564387
Alignment:
Q  46 gctaataataagattaagatagtgaaaattttgannnnnnnnctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaatt 145  Q
    ||||||||||||||||||| ||||||||  ||||        ||||||||||||||||||||| |||  ||||||| ||||| ||||||||| | |||||    
T  42564285 gctaataataagattaagagagtgaaaaacttgattttttttctgtgtccaaatcaaatgatctaagtctctatttatagagaaaaaaaaattaagaatt 42564384  T
Q  146 ttg 148  Q
    |||    
T  42564385 ttg 42564387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 88 - 150
Target Start/End: Original strand, 47147654 - 47147716
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    ||||||||||||||||||| |||||  ||||||| ||||| ||||||||||| ||||||||||    
T  47147654 ctgtgtccaaatcaaatgaaccaagtctctatttatagagaaaaaaaaatcatgaattttggt 47147716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 88 - 150
Target Start/End: Complemental strand, 49822637 - 49822576
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    ||||||||||||||||| ||||||| |||||||| |||| |||||||||||| ||||||||||    
T  49822637 ctgtgtccaaatcaaattatccaagtttctatttataga-gaaaaaaaatcatgaattttggt 49822576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 251
Target Start/End: Original strand, 7008585 - 7008654
Alignment:
Q  182 atgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatcgtaacaagccacgtgtc 251  Q
    |||||||||||||||||||| ||||||||  |||||||| |||||||||||||  | | |||||||||||    
T  7008585 atgaaataattgagtccaaaatattaagatgataaaaatccaagcagccaatcaaacccagccacgtgtc 7008654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 175 - 220
Target Start/End: Complemental strand, 26162149 - 26162104
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaat 220  Q
    |||||| |||||||||||||||||||||||||||||| ||||||||    
T  26162149 atttgcaatgaaataattgagtccaaattattaagaagataaaaat 26162104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 175 - 220
Target Start/End: Complemental strand, 49027028 - 49026983
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaat 220  Q
    |||||| |||||||||||||||||||||||||||||| ||||||||    
T  49027028 atttgcaatgaaataattgagtccaaattattaagaagataaaaat 49026983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 175 - 220
Target Start/End: Complemental strand, 50415409 - 50415364
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaat 220  Q
    |||||| |||||||||||||||||||||||||||||| ||||||||    
T  50415409 atttgcaatgaaataattgagtccaaattattaagaagataaaaat 50415364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 175 - 251
Target Start/End: Complemental strand, 35540175 - 35540099
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatcgtaacaagccacgtgtc 251  Q
    |||||| |||||||||||||||||||| |||| |||  |||| |||  |||||||||||||||||| |||| |||||    
T  35540175 atttgcaatgaaataattgagtccaaaatattgagatgataagaatcgaagcagccaatcgtaacatgccaagtgtc 35540099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 175 - 251
Target Start/End: Complemental strand, 38571757 - 38571681
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatcgtaacaagccacgtgtc 251  Q
    |||||| || ||||||||||||||||| ||||||||  |||||||| ||||||||||| || |||  ||||||||||    
T  38571757 atttgcaataaaataattgagtccaaaatattaagatgataaaaatccaagcagccaaacgaaacgcgccacgtgtc 38571681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 88 - 148
Target Start/End: Original strand, 42602251 - 42602311
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttg 148  Q
    ||||||||||||||||||| |||||  ||||||| ||||| ||||||||||| ||||||||    
T  42602251 ctgtgtccaaatcaaatgaaccaagtctctatttatagagaaaaaaaaatcatgaattttg 42602311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 175 - 251
Target Start/End: Original strand, 43475881 - 43475957
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatcgtaacaagccacgtgtc 251  Q
    |||||| || ||||||||||||| ||| ||||||||  |||||||| |||||||||||||| ||| ||||| |||||    
T  43475881 atttgcaataaaataattgagtctaaaatattaagatgataaaaatccaagcagccaatcgaaaccagccatgtgtc 43475957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 88 - 147
Target Start/End: Original strand, 55027144 - 55027201
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaatttt 147  Q
    |||||||||||||||||||||||||  ||||||| |||||  ||||||||||||||||||    
T  55027144 ctgtgtccaaatcaaatgatccaagtctctatttatagag--aaaaaaatcacgaatttt 55027201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 175 - 235
Target Start/End: Original strand, 55027225 - 55027285
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatcg 235  Q
    |||||| |||||||||||||||| ||| ||||||||  |||||||| ||||||||||||||    
T  55027225 atttgcaatgaaataattgagtctaaaatattaagatgataaaaatccaagcagccaatcg 55027285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 234
Target Start/End: Original strand, 50734485 - 50734544
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatc 234  Q
    |||||| || ||||||||| ||||||||||||||||| |||||||| | |||||||||||    
T  50734485 atttgcaataaaataattgggtccaaattattaagaagataaaaatccgagcagccaatc 50734544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 234
Target Start/End: Complemental strand, 50778370 - 50778311
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatc 234  Q
    |||||| || ||||||||| ||||||||||||||||| |||||||| | |||||||||||    
T  50778370 atttgcaataaaataattgggtccaaattattaagaagataaaaatccgagcagccaatc 50778311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 234
Target Start/End: Complemental strand, 51998845 - 51998786
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatc 234  Q
    |||||| |||||||||||| ||||||||||||||||| || ||||| | |||||||||||    
T  51998845 atttgcaatgaaataattgggtccaaattattaagaagatcaaaatccgagcagccaatc 51998786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 88 - 150
Target Start/End: Complemental strand, 49356978 - 49356916
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    ||||||||||||||||||| |||||  |||||||  |||| ||||||||||| ||||||||||    
T  49356978 ctgtgtccaaatcaaatgaaccaagtctctatttaaagagaaaaaaaaatcatgaattttggt 49356916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 175 - 220
Target Start/End: Complemental strand, 30415062 - 30415017
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaat 220  Q
    |||||| |||||||||||||||||||| ||||||||| ||||||||    
T  30415062 atttgcaatgaaataattgagtccaaagtattaagaagataaaaat 30415017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 175 - 240
Target Start/End: Complemental strand, 46136883 - 46136818
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatcgtaaca 240  Q
    |||||| |||||||||||||||||||| ||||||||  ||||||||  |||||  |||||||||||    
T  46136883 atttgcaatgaaataattgagtccaaaatattaagatgataaaaatcaaagcaatcaatcgtaaca 46136818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 175 - 251
Target Start/End: Original strand, 4046587 - 4046663
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatcgtaacaagccacgtgtc 251  Q
    |||||| |||||||||||   |||||||||||||||| |||||||| | |||||||||||  |||| |||| |||||    
T  4046587 atttgcaatgaaataattcgatccaaattattaagaagataaaaatccgagcagccaatcaaaacatgccaagtgtc 4046663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 148
Target Start/End: Complemental strand, 10424343 - 10424284
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttg 148  Q
    ||||||||||||||||| |||||||  ||||||| |||| |||||||||| ||||||||||    
T  10424343 ctgtgtccaaatcaaataatccaagtctctatttataga-gaaaaaaaattacgaattttg 10424284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 175 - 251
Target Start/End: Complemental strand, 49406940 - 49406864
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatcgtaacaagccacgtgtc 251  Q
    |||||| ||||||||||||||| |||||||||||||  ||||||||  | |||| |||||| |||  ||||||||||    
T  49406940 atttgcaatgaaataattgagttcaaattattaagatgataaaaatctatgcagtcaatcgaaacgcgccacgtgtc 49406864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 91 - 150
Target Start/End: Original strand, 15007581 - 15007640
Alignment:
Q  91 tgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    ||||||||||||| ||||||||  | ||||| ||||| |||| |||||||||||||||||    
T  15007581 tgtccaaatcaaaagatccaagtctttatttatagagaaaaagaaatcacgaattttggt 15007640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 88 - 149
Target Start/End: Original strand, 43475799 - 43475862
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagag-ga-aaaaaaatcacgaattttgg 149  Q
    ||||||||||||||||||||| |||  ||||||| ||||| || ||||||||||||||||||||    
T  43475799 ctgtgtccaaatcaaatgatcaaagtctctatttatagagagagaaaaaaatcacgaattttgg 43475862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 150
Target Start/End: Original strand, 28410775 - 28410837
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    ||||||||||||||||||| |||||  ||||||| ||||  ||| ||||||| ||||||||||    
T  28410775 ctgtgtccaaatcaaatgaaccaagtctctatttatagacaaaataaaatcatgaattttggt 28410837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 150
Target Start/End: Complemental strand, 30688594 - 30688532
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    |||||||||||||||||||  |||   ||||||| ||||| ||||||||||| ||||||||||    
T  30688594 ctgtgtccaaatcaaatgaatcaaatctctatttatagagaaaaaaaaatcatgaattttggt 30688532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 150
Target Start/End: Complemental strand, 35540256 - 35540195
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    ||||||| ||||||||| |||||||  ||||||| ||||| ||||||||||| ||||||||||    
T  35540256 ctgtgtcaaaatcaaattatccaagtctctatttatagag-aaaaaaaatcatgaattttggt 35540195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 150
Target Start/End: Complemental strand, 35852931 - 35852869
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    ||||||||||||||||||| |||||  ||||||| ||||  ||| ||||||| ||||||||||    
T  35852931 ctgtgtccaaatcaaatgaaccaagtctctatttatagacaaaataaaatcatgaattttggt 35852869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 150
Target Start/End: Complemental strand, 37182757 - 37182696
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    |||||||||||||||||||||||||  ||||||| |||| |||| ||||| ||||| ||||||    
T  37182757 ctgtgtccaaatcaaatgatccaagtctctatttataga-gaaataaaattacgaagtttggt 37182696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 150
Target Start/End: Original strand, 43022984 - 43023046
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    ||||||||||||||||||| |||||  ||||||| ||||  ||| ||||||| ||||||||||    
T  43022984 ctgtgtccaaatcaaatgaaccaagtctctatttatagacaaaataaaatcatgaattttggt 43023046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 234
Target Start/End: Complemental strand, 46572562 - 46572504
Alignment:
Q  176 tttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatc 234  Q
    ||||| ||||||||||||||| |||||||||||||  | ||||||||| ||| ||||||    
T  46572562 tttgcaatgaaataattgagttcaaattattaagatgacaaaaattcaggcaaccaatc 46572504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 175 - 220
Target Start/End: Original strand, 27848052 - 27848097
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaat 220  Q
    |||||| |||||||||||||||| ||| ||||||||| ||||||||    
T  27848052 atttgcaatgaaataattgagtctaaagtattaagaagataaaaat 27848097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 148
Target Start/End: Original strand, 33751694 - 33751754
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttg 148  Q
    ||||| ||||||||||||| |||||  ||||||| ||||| |||||||||||  |||||||    
T  33751694 ctgtgcccaaatcaaatgaaccaagtctctatttatagagaaaaaaaaatcataaattttg 33751754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 107; Significance: 1e-53; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 18 - 249
Target Start/End: Complemental strand, 7762942 - 7762724
Alignment:
Q  18 aaacaaagactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaattttgannnnnnnnctgtgtccaaatcaaatgatccaagattct 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||        |||||||||||||||||||||||||  |||    
T  7762942 aaacaaagactaaaacttcaaaagaaatgctaataataagattaagagagtgaaaaatttgattttttttctgtgtccaaatcaaatgatccaagtctct 7762843  T
Q  118 atttgtagaggaaaaaaaatcacgaattttggtnnnnnnnnnttaaannnnnnnnnnatttgctatgaaataattgagtccaaattattaagaaaataaa 217  Q
    |||||||||| ||||||||||||||||||||||           |||          ||||||||||||||||||||||||||||||||||||| |||||    
T  7762842 atttgtagagaaaaaaaaatcacgaattttggtaaaaaaa----aaat---------atttgctatgaaataattgagtccaaattattaagaagataaa 7762756  T
Q  218 aattcaagcagccaatcgtaacaagccacgtg 249  Q
    ||||||||||| ||||||||||||||||||||    
T  7762755 aattcaagcagtcaatcgtaacaagccacgtg 7762724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 15 - 150
Target Start/End: Complemental strand, 1308444 - 1308310
Alignment:
Q  15 actaaacaaagactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaa-ttttgannnnnnnnctgtgtccaaatcaaatgatccaaga 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||         |||||||||||||||||||||||||     
T  1308444 actaaacaaagactaaaacttcaaaagaaatgctaataataagattaagagagggaaaatttttgtttttttttctgtgtccaaatcaaatgatccaagt 1308345  T
Q  114 ttctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
     |||||||||||||  |||||||||||||||||||||    
T  1308344 ctctatttgtagag--aaaaaaatcacgaattttggt 1308310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 22 - 150
Target Start/End: Complemental strand, 7585290 - 7585161
Alignment:
Q  22 aaagactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaatt-ttgannnnnnnnctgtgtccaaatcaaatgatccaagattctatt 120  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||| | |         |||||||||||||||||||||||||  ||||||    
T  7585290 aaagactaaaacttcaaaagaaatgctaataataagattaagagagtgaaaattatggtttttttttctgtgtccaaatcaaatgatccaagtctctatt 7585191  T
Q  121 tgtagaggaaaaaaaatcacgaattttggt 150  Q
    | ||||| ||||||||||||||||||||||    
T  7585190 tatagagaaaaaaaaatcacgaattttggt 7585161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 15 - 234
Target Start/End: Complemental strand, 17928970 - 17928748
Alignment:
Q  15 actaaacaaagactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaattttgannnnnnnn---ctgtgtccaaatcaaatgatccaa 111  Q
    |||||||||||||||||||||||||| |||||| |||||||||||||||| |||||||| ||||            ||||||||||||||||||||||||    
T  17928970 actaaacaaagactaaaacttcaaaataaatgcaaataataagattaagagagtgaaaaatttggtttttttttttctgtgtccaaatcaaatgatccaa 17928871  T
Q  112 gattctatttgtagaggaaaaaaaatcacgaattttggtnnnnnnnnnttaaannnnnnnnnna-tttgctatgaaataattgagtccaaattattaaga 210  Q
    |  ||||||||||||| ||||||||||||||||||||||           |||          | ||||| |||||||||||||||||||||||||||||    
T  17928870 gtctctatttgtagag-aaaaaaaatcacgaattttggtaaaaaaaataaaaaataaaaaataaatttgcaatgaaataattgagtccaaattattaaga 17928772  T
Q  211 aaataaaaattcaagcagccaatc 234  Q
    | |||||||| |||||||||||||    
T  17928771 agataaaaatccaagcagccaatc 17928748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 15 - 150
Target Start/End: Complemental strand, 36209225 - 36209089
Alignment:
Q  15 actaaacaaagactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaattttga-nnnnnnnnctgtgtccaaatcaaatgatccaaga 113  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| | | |         ||||||| |||||||||||||||||     
T  36209225 actaaacaaagactaaaacttcaaaagaaatgctaataataatattaagagagtgaaaaatatcatttttttttctgtgtctaaatcaaatgatccaagt 36209126  T
Q  114 ttctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
     ||||||||||||| |||||||||||| |||||||||    
T  36209125 ctctatttgtagagaaaaaaaaatcacaaattttggt 36209089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 15 - 150
Target Start/End: Original strand, 4279400 - 4279535
Alignment:
Q  15 actaaacaaagactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaattttga-nnnnnnnnctgtgtccaaatcaaatgatccaaga 113  Q
    |||||| |||| |||||||||||||||||| ||||||||||||||||||| ||||||||  ||||         ||||||| |||||||||||||||||     
T  4279400 actaaataaagtctaaaacttcaaaagaaaagctaataataagattaagagagtgaaaaacttgatttttttttctgtgtcaaaatcaaatgatccaagt 4279499  T
Q  114 ttctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
     |||||||||||| |||||||||||||||||||||||    
T  4279500 ctctatttgtaga-gaaaaaaaatcacgaattttggt 4279535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 183 - 251
Target Start/End: Original strand, 17486269 - 17486337
Alignment:
Q  183 tgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatcgtaacaagccacgtgtc 251  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| |||||||||    
T  17486269 tgaaataattgagtccaaattattaagaagataaaaattcaagcagccaattgtaacaaaccacgtgtc 17486337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 17486149 - 17486213
Alignment:
Q  15 actaaacaaagactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaattttga 79  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||    
T  17486149 actaaacaaagactaaaacttcaaaagaaatgctaatattaagattaagagagtgaaaaatttga 17486213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 46 - 234
Target Start/End: Complemental strand, 22349633 - 22349445
Alignment:
Q  46 gctaataataagattaagatagtgaaaattttgannnnnnnnctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaatt 145  Q
    |||||| |||||||||||| ||||||||  ||||        |||||||||||||||||||||||||  ||||||| ||||| ||||||||| |||||||    
T  22349633 gctaatgataagattaagagagtgaaaaacttgattttttttctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaaattacgaatt 22349534  T
Q  146 ttggtnnnnnnnnnttaaannnnnnnnnnatttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatc 234  Q
    |||||           |||          |||||| |||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  22349533 ttggtaaaaaaaaaaaaaaaaaaaaaattatttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatc 22349445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 175 - 234
Target Start/End: Original strand, 39490592 - 39490651
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatc 234  Q
    |||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  39490592 atttgcaatgaaataattgagtccaaattattaagaagataaaaattcaagcagccaatc 39490651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 46 - 150
Target Start/End: Original strand, 44280457 - 44280561
Alignment:
Q  46 gctaataataagattaagatagtgaaaattttgannnnnnnnctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaatt 145  Q
    ||||||||||||||||||| ||||||||  ||||        |||||||||||||||||||||||||  ||||||| ||||| ||||||||| |||||||    
T  44280457 gctaataataagattaagagagtgaaaaacttgattttttttctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaaattacgaatt 44280556  T
Q  146 ttggt 150  Q
    |||||    
T  44280557 ttggt 44280561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 175 - 234
Target Start/End: Original strand, 43022151 - 43022210
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatc 234  Q
    |||||| |||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  43022151 atttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatc 43022210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 15 - 73
Target Start/End: Complemental strand, 5145140 - 5145082
Alignment:
Q  15 actaaacaaagactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaa 73  Q
    |||||| |||||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  5145140 actaaataaagactaaaacatcaaaagaaatgctaataataagattaagagagtgaaaa 5145082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 88 - 150
Target Start/End: Original strand, 12858272 - 12858334
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    |||||||||||||||||||||||||  ||||||| ||||||||||||||||| ||||||||||    
T  12858272 ctgtgtccaaatcaaatgatccaagtctctatttatagaggaaaaaaaatcatgaattttggt 12858334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 88 - 150
Target Start/End: Complemental strand, 30819357 - 30819295
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    |||||||||||||||||||||||||  ||||||| ||||||||||||||||| ||||||||||    
T  30819357 ctgtgtccaaatcaaatgatccaagtctctatttatagaggaaaaaaaatcatgaattttggt 30819295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 175 - 228
Target Start/End: Complemental strand, 1308289 - 1308236
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcag 228  Q
    |||||| |||||||||||||||||||||||||||||| ||||||||||||||||    
T  1308289 atttgcaatgaaataattgagtccaaattattaagaagataaaaattcaagcag 1308236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 46 - 150
Target Start/End: Original strand, 14383310 - 14383415
Alignment:
Q  46 gctaataataagattaagatagtgaaaattttgannnnnnnnctgtgtccaaatcaaatgatccaagattctatttgtagagg-aaaaaaaatcacgaat 144  Q
    ||||||||||||||||||| ||||||||  ||||        |||||||||||||||||||||||||  ||||||| |||||| ||||||||| ||||||    
T  14383310 gctaataataagattaagagagtgaaaaacttgattttttttctgtgtccaaatcaaatgatccaagtctctatttatagaggaaaaaaaaattacgaat 14383409  T
Q  145 tttggt 150  Q
    ||||||    
T  14383410 tttggt 14383415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 150
Target Start/End: Original strand, 6363696 - 6363831
Alignment:
Q  14 tactaaacaaagactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaattttgannnnnnnnctgtgtccaaatcaaatgatccaaga 113  Q
    ||||||| |||||||||||||||||||||||  ||||||| |||||||||| ||||||||  |||         || | |||||||||||||||| |||     
T  6363696 tactaaataaagactaaaacttcaaaagaaaatctaataaaaagattaagagagtgaaaaacttggttttttttctatatccaaatcaaatgatcaaagt 6363795  T
Q  114 ttctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
     ||||||  |||||| |||||||||||||||||||||    
T  6363796 ctctattcatagagg-aaaaaaatcacgaattttggt 6363831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 88 - 150
Target Start/End: Original strand, 1987525 - 1987587
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    ||||||||||||||||||| |||||  ||||||| ||||||||||||||||| ||||||||||    
T  1987525 ctgtgtccaaatcaaatgaaccaagtctctatttatagaggaaaaaaaatcatgaattttggt 1987587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 23 - 73
Target Start/End: Complemental strand, 13151338 - 13151288
Alignment:
Q  23 aagactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaa 73  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  13151338 aagactaaaacttcaaaagaaaagctaataataagattaagagagtgaaaa 13151288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 88 - 150
Target Start/End: Original strand, 43022075 - 43022137
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    |||||||||||||||||||||||||  ||||||| ||||| ||||||||| ||||||||||||    
T  43022075 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaaattacgaattttggt 43022137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 175 - 236
Target Start/End: Complemental strand, 5144979 - 5144918
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatcgt 236  Q
    |||||| |||||||||| ||||||||||||||||||| ||||||||  ||||||||||||||    
T  5144979 atttgcaatgaaataatcgagtccaaattattaagaagataaaaatcgaagcagccaatcgt 5144918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 48 - 150
Target Start/End: Complemental strand, 926581 - 926478
Alignment:
Q  48 taataataagattaagatagtgaaaattttgannnnnnnnctgtgtccaaatcaaatgatccaagattctatttgtagag-gaaaaaaaatcacgaattt 146  Q
    ||||||||||||||||||||||||||  |||         ||||||||||||||||||| |||||  ||||||| ||||| |||||||||||| ||||||    
T  926581 taataataagattaagatagtgaaaaacttggttttttttctgtgtccaaatcaaatgaaccaagtctctatttatagagagaaaaaaaatcatgaattt 926482  T
Q  147 tggt 150  Q
    ||||    
T  926481 tggt 926478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 175 - 234
Target Start/End: Original strand, 14383441 - 14383500
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatc 234  Q
    |||||| |||||||||||| ||||||||||||||||| |||||||| | |||||||||||    
T  14383441 atttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatc 14383500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 175 - 234
Target Start/End: Complemental strand, 36209082 - 36209023
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatc 234  Q
    |||||| |||||||||||||||||||||||||||||| |||||||| |||  ||||||||    
T  36209082 atttgcaatgaaataattgagtccaaattattaagaagataaaaatccaaaaagccaatc 36209023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 175 - 234
Target Start/End: Original strand, 36527282 - 36527341
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatc 234  Q
    |||||| |||||||||||| ||||||||||||||||| |||||||| | |||||||||||    
T  36527282 atttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatc 36527341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 175 - 234
Target Start/End: Original strand, 44280575 - 44280634
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatc 234  Q
    |||||| |||||||||||| ||||||||||||||||| |||||||| | |||||||||||    
T  44280575 atttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatc 44280634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 88 - 150
Target Start/End: Complemental strand, 4296342 - 4296280
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    ||||||||||||||||||| |||||  ||||||| ||||| ||||||||||| ||||||||||    
T  4296342 ctgtgtccaaatcaaatgaaccaagtctctatttatagagaaaaaaaaatcatgaattttggt 4296280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 88 - 150
Target Start/End: Original strand, 8855380 - 8855442
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    ||||||||||||||||||| |||||  ||||||| ||||| ||||||||||| ||||||||||    
T  8855380 ctgtgtccaaatcaaatgaaccaagtctctatttatagagaaaaaaaaatcatgaattttggt 8855442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 88 - 150
Target Start/End: Complemental strand, 9072660 - 9072598
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    |||||||||||||||||||||||||  ||||||| ||||||  ||||||||| ||||||||||    
T  9072660 ctgtgtccaaatcaaatgatccaagtctctatttatagaggggaaaaaatcatgaattttggt 9072598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 73
Target Start/End: Complemental strand, 14151994 - 14151944
Alignment:
Q  23 aagactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaa 73  Q
    ||||| |||||||||||||||| ||||||||||||||||||| ||||||||    
T  14151994 aagacgaaaacttcaaaagaaaagctaataataagattaagagagtgaaaa 14151944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 88 - 150
Target Start/End: Original strand, 36527203 - 36527265
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    |||||||||||||||||||||||||  ||||||| ||||| ||||||||  ||||||||||||    
T  36527203 ctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaaaatacgaattttggt 36527265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 88 - 147
Target Start/End: Complemental strand, 1072751 - 1072694
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaatttt 147  Q
    |||||||||||||||||||||||||  ||||||| |||||  ||||||||||||||||||    
T  1072751 ctgtgtccaaatcaaatgatccaagtctctatttatagag--aaaaaaatcacgaatttt 1072694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 88 - 147
Target Start/End: Original strand, 9118207 - 9118264
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaatttt 147  Q
    |||||||||||||||||||||||||  ||||||| |||||  ||||||||||||||||||    
T  9118207 ctgtgtccaaatcaaatgatccaagtctctatttatagag--aaaaaaatcacgaatttt 9118264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 175 - 235
Target Start/End: Original strand, 9118288 - 9118348
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatcg 235  Q
    |||||| |||||||||||||||| ||| ||||||||  |||||||| ||||||||||||||    
T  9118288 atttgcaatgaaataattgagtctaaaatattaagatgataaaaatccaagcagccaatcg 9118348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 175 - 235
Target Start/End: Complemental strand, 13151220 - 13151160
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatcg 235  Q
    |||||| ||||||||||||||| |||||||||||||  ||||||||  |||||||||||||    
T  13151220 atttgcaatgaaataattgagttcaaattattaagatgataaaaatctaagcagccaatcg 13151160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 88 - 150
Target Start/End: Complemental strand, 5145059 - 5144998
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    |||||||||||||||||||||||||  |||| |||||||| | ||||| ||||||||||||||    
T  5145059 ctgtgtccaaatcaaatgatccaagtctcta-ttgtagagaataaaaattcacgaattttggt 5144998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 88 - 150
Target Start/End: Original strand, 37246035 - 37246097
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    |||||||||||| |||||| |||||  ||||||| ||||| ||||||||||| ||||||||||    
T  37246035 ctgtgtccaaattaaatgaaccaagtctctatttatagagaaaaaaaaatcatgaattttggt 37246097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 89 - 150
Target Start/End: Complemental strand, 39432450 - 39432391
Alignment:
Q  89 tgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    ||||||||||||||||||||||||  ||||||| |||||  |||||||||| ||||||||||    
T  39432450 tgtgtccaaatcaaatgatccaagtctctatttatagag--aaaaaaatcatgaattttggt 39432391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 175 - 240
Target Start/End: Original strand, 6363843 - 6363908
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatcgtaaca 240  Q
    |||||| || ||||||||||||| ||| ||||||||  ||||||||  ||||||||||||||||||    
T  6363843 atttgcaattaaataattgagtctaaaatattaagatgataaaaatcgaagcagccaatcgtaaca 6363908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 175 - 220
Target Start/End: Complemental strand, 7585135 - 7585090
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaat 220  Q
    |||||| |||||||||||||||||||| ||||||||| ||||||||    
T  7585135 atttgcaatgaaataattgagtccaaagtattaagaagataaaaat 7585090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 148
Target Start/End: Complemental strand, 36855095 - 36855036
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttg 148  Q
    ||||||||||||||||||| |||||  ||||||| |||| |||||||||||| ||||||||    
T  36855095 ctgtgtccaaatcaaatgaaccaagtctctatttataga-gaaaaaaaatcatgaattttg 36855036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 91 - 150
Target Start/End: Complemental strand, 31184974 - 31184915
Alignment:
Q  91 tgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    |||||||||||||||| |||||  ||||||| |||||  |||||||||| ||||||||||    
T  31184974 tgtccaaatcaaatgaaccaagtctctatttatagagagaaaaaaatcatgaattttggt 31184915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 91 - 150
Target Start/End: Complemental strand, 31204700 - 31204641
Alignment:
Q  91 tgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    |||||||||||||||| |||||  |||||||  |||| ||||||||||| ||||||||||    
T  31204700 tgtccaaatcaaatgaaccaagtctctatttacagagaaaaaaaaatcatgaattttggt 31204641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 88 - 150
Target Start/End: Complemental strand, 43494956 - 43494896
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    ||||||||||||||||||| |||||  ||||||| ||||  ||||||||||| ||||||||||    
T  43494956 ctgtgtccaaatcaaatgaaccaagtctctatttataga--aaaaaaaatcatgaattttggt 43494896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 233
Target Start/End: Complemental strand, 1072670 - 1072612
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaat 233  Q
    |||||| |||||||||||||||| ||| ||||||||  |||||||| ||||||| ||||    
T  1072670 atttgcaatgaaataattgagtctaaaatattaagatgataaaaatccaagcagtcaat 1072612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 56
Target Start/End: Complemental strand, 6333053 - 6333012
Alignment:
Q  15 actaaacaaagactaaaacttcaaaagaaatgctaataataa 56  Q
    |||||| ||||| ||||||||||||||||| |||||||||||    
T  6333053 actaaaaaaagattaaaacttcaaaagaaaagctaataataa 6333012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 88 - 137
Target Start/End: Complemental strand, 13151271 - 13151222
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaat 137  Q
    ||||||| |||||||||||||||||  ||||||| ||||| |||||||||    
T  13151271 ctgtgtcgaaatcaaatgatccaagtctctatttatagagaaaaaaaaat 13151222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 175 - 220
Target Start/End: Complemental strand, 14151868 - 14151823
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaat 220  Q
    |||||| ||||||||||||||| |||||||||||||  ||||||||    
T  14151868 atttgcaatgaaataattgagttcaaattattaagatgataaaaat 14151823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 150
Target Start/End: Complemental strand, 2778834 - 2778775
Alignment:
Q  90 gtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    ||||||||||||||| | |||||  ||||||| |||| |||||||||||| ||||||||||    
T  2778834 gtgtccaaatcaaataaaccaagtctctatttataga-gaaaaaaaatcatgaattttggt 2778775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1905 (Bit Score: 100; Significance: 1e-49; HSPs: 3)
Name: scaffold1905
Description:

Target: scaffold1905; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 15 - 251
Target Start/End: Complemental strand, 1197 - 965
Alignment:
Q  15 actaaacaaagactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaattttgannnnnnnnctgtgtccaaatcaaatgatccaagat 114  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| |||||        |||||||||||||||||||||||||      
T  1197 actaaacaaagactaaaacttcaaaagaaatgctaataataaaattaagagagtgaaaaatttgattttttttctgtgtccaaatcaaatgatccaagtc 1098  T
Q  115 tctatttgtagaggaaaaaaaa-tcacgaattttggtnnnnnnnnnttaaannnnnnnnnnatttgctatgaaataattgagtccaaattattaagaaaa 213  Q
    ||||||||||||| |||||||| ||||||||||||||          ||||          |||||| |||||||||||||||| ||||||||||||| |    
T  1097 tctatttgtagagaaaaaaaaaatcacgaattttggtaaaaaa----taaaataaaatta-atttgcaatgaaataattgagtcaaaattattaagaaga 1003  T
Q  214 taaaaattcaagcagccaatcgtaacaagccacgtgtc 251  Q
    ||||||||||||||||||||||||||||||||||||||    
T  1002 taaaaattcaagcagccaatcgtaacaagccacgtgtc 965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1905; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 175 - 251
Target Start/End: Original strand, 387 - 463
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatcgtaacaagccacgtgtc 251  Q
    |||||| ||||||||||||||||||||| |||||||| ||||||||||||||||||||||  |||| |||| |||||    
T  387 atttgcaatgaaataattgagtccaaataattaagaagataaaaattcaagcagccaatcaaaacatgccaagtgtc 463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1905; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 46 - 150
Target Start/End: Original strand, 268 - 373
Alignment:
Q  46 gctaataataagattaagatagtgaaaattttgannnnnnnnctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaa-aaatcacgaat 144  Q
    ||||||||||||||||||| ||||||||  ||||        || ||||||||||||||||||||||  ||||||| ||||| ||||| |||| ||||||    
T  268 gctaataataagattaagagagtgaaaaacttgattttttttctttgtccaaatcaaatgatccaagtctctatttatagagaaaaaacaaattacgaat 367  T
Q  145 tttggt 150  Q
    ||||||    
T  368 tttggt 373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 89; Significance: 5e-43; HSPs: 55)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 15 - 251
Target Start/End: Original strand, 45363786 - 45364017
Alignment:
Q  15 actaaacaaagactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaattttg---annnnnnnnctgtgtccaaatcaaatgatccaa 111  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||            ||||||||||||||||||||||||    
T  45363786 actaaacaaagactaaaacttcaaaagaaatgctaataataagattaagagagtgaaaattttggtttttttttttctgtgtccaaatcaaatgatccaa 45363885  T
Q  112 gattctatttgtagaggaaaaaaa-atcacgaattttggtnnnnnnnnnttaaannnnnnnnnnatttgctatgaaataattgagtccaaattattaaga 210  Q
    |  ||||||||||||| ||||||| |||||||||||||||          ||||          |||||||||||||||||||||| |||||||||||||    
T  45363886 gtctctatttgtagagaaaaaaaatatcacgaattttggtaaaaataaaataaa---------aatttgctatgaaataattgagttcaaattattaaga 45363976  T
Q  211 aaataaaaattcaagcagccaatcgtaacaagccacgtgtc 251  Q
    | |||||||| ||||||| |||||||||||| |||||||||    
T  45363977 agataaaaatccaagcagtcaatcgtaacaaaccacgtgtc 45364017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 15 - 150
Target Start/End: Original strand, 37822911 - 37823045
Alignment:
Q  15 actaaacaaagactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaattttgannnnnnnnctgtgtccaaatcaaatgatccaagat 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||          ||||||||||||||||||||||||      
T  37822911 actaaacaaagactaaaacttcaaaagaaatgctaataataagattaagagagtgaaaaatttg-gtttttttttgtgtccaaatcaaatgatccaagtc 37823009  T
Q  115 tctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    ||||||||||||| ||||||||||||||||||||||    
T  37823010 tctatttgtagagaaaaaaaaatcacgaattttggt 37823045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 15 - 251
Target Start/End: Complemental strand, 51156447 - 51156224
Alignment:
Q  15 actaaacaaagactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaattttgannnnnnnnctgtgtccaaatcaaatgatccaagat 114  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| | |||        |||||||||||||||||||||||||      
T  51156447 actaaacaaagactaaaacttcaaaagaaatgctaattataagattaagagagtgaaaaatatgattttttttctgtgtccaaatcaaatgatccaagtc 51156348  T
Q  115 tctatttgtagaggaaaaaaaatcacgaattttggtnnnnnnnnnttaaannnnnnnnnnatttgctatgaaataattgagtccaaattattaagaaaat 214  Q
    ||||||| ||||| ||||||||| ||||||||||||            ||          |||||| |||||||||||||||||||||||||||||| ||    
T  51156347 tctatttatagag-aaaaaaaattacgaattttggt------------aaaaaaaaaatcatttgcaatgaaataattgagtccaaattattaagaagat 51156261  T
Q  215 aaaaattcaagcagccaatcgtaacaagccacgtgtc 251  Q
    |||  |||||||| |||||||||||||| ||||||||    
T  51156260 aaattttcaagcaaccaatcgtaacaaggcacgtgtc 51156224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 15 - 150
Target Start/End: Original strand, 33167523 - 33167659
Alignment:
Q  15 actaaacaaagactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaattttgannnnnnnnctgtgtccaaatcaaatgatccaagat 114  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| |||||        |||||||||||||||||||| ||||      
T  33167523 actaaacaaagactaaaacttcaaaagaaatgttaataataagattaagagagtgaaaaatttgattttttttctgtgtccaaatcaaatgattcaagtc 33167622  T
Q  115 tctatttgtagagg-aaaaaaaatcacgaattttggt 150  Q
    ||||||| |||||| ||||||||||||||||||||||    
T  33167623 tctatttatagaggaaaaaaaaatcacgaattttggt 33167659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 15 - 236
Target Start/End: Original strand, 29524208 - 29524425
Alignment:
Q  15 actaaacaaagactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaattttg----annnnnnnnctgtgtccaaatcaaatgatcca 110  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| ||||             |||||||||||||||||||||||    
T  29524208 actaaacaaagattaaaacttcaaaagaaatgctaataataagattaagagagtgaaaaatttgttatttttttcttctgtgtccaaatcaaatgatcca 29524307  T
Q  111 agattctatttgtagaggaaaaaaaatcacgaattttggtnnnnnnnnnttaaannnnnnnnnnatttgctatgaaataattgagtccaaattattaaga 210  Q
    ||  |||||||||||| |||||||||||||||||||||||          ||||          |||||| |||||||||||||||||||||||||||||    
T  29524308 agtctctatttgtaga-gaaaaaaaatcacgaattttggtaaaaataaaataaa-------attatttgcaatgaaataattgagtccaaattattaaga 29524399  T
Q  211 aaataaaaattcaagcagccaatcgt 236  Q
    | |||||||| ||| |||||||||||    
T  29524400 agataaaaatccaaccagccaatcgt 29524425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 22 - 150
Target Start/End: Complemental strand, 2474880 - 2474751
Alignment:
Q  22 aaagactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaatt-ttgannnnnnnnctgtgtccaaatcaaatgatccaagattctatt 120  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||| | |         |||||||||||||||||||||||||  ||||||    
T  2474880 aaagactaaaacttcaaaagaaatgctaataataagattaagagagtgaaaattatggtttttttttctgtgtccaaatcaaatgatccaagtctctatt 2474781  T
Q  121 tgtagaggaaaaaaaatcacgaattttggt 150  Q
    | ||||| ||||||||||||||||||||||    
T  2474780 tatagagaaaaaaaaatcacgaattttggt 2474751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 15 - 150
Target Start/End: Original strand, 8471520 - 8471657
Alignment:
Q  15 actaaacaaagactaaaacttcaaaagaaatgctaataataagattaagatagtg-aaaattttgannnnnnnnctgtgtccaaatcaaatgatccaaga 113  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| |         |||||||||||||||||||||||||     
T  8471520 actaaataaagactaaaacttcaaaagaaatgctaataataagattaagagagtgaaaaatttggtttttttttctgtgtccaaatcaaatgatccaagt 8471619  T
Q  114 ttctatttgtagag-gaaaaaaaatcacgaattttggt 150  Q
     ||||||| ||||| || ||||||||||||||||||||    
T  8471620 ctctatttatagagagagaaaaaatcacgaattttggt 8471657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 33 - 251
Target Start/End: Original strand, 43739357 - 43739567
Alignment:
Q  33 cttcaaaagaaatgctaataataagattaagatagtgaaaattttgannnnnnnnctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaa 132  Q
    |||||||||||| ||||||||||||||||||| ||||||||  ||||        |||||||||||||||||||| ||||  ||||||| ||||| ||||    
T  43739357 cttcaaaagaaaagctaataataagattaagagagtgaaaaacttgatttttttcctgtgtccaaatcaaatgattcaagtctctatttatagag-aaaa 43739455  T
Q  133 aaaatcacgaattttggtnnnnnnnnnttaaannnnnnnnnnatttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaa 232  Q
    ||||||||||||||||||          || |          |||||| |||||||||||||||||||| ||||||||  ||||||||||||||||||||    
T  43739456 aaaatcacgaattttggtaaagtatatatatatat-------atttgcaatgaaataattgagtccaaaatattaagatgataaaaattcaagcagccaa 43739548  T
Q  233 tcgtaacaagccacgtgtc 251  Q
    ||| |||  ||||||||||    
T  43739549 tcgaaacgcgccacgtgtc 43739567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 46 - 150
Target Start/End: Complemental strand, 10265765 - 10265660
Alignment:
Q  46 gctaataataagattaagatagtgaaaattttgannnnnnnnctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaa-aatcacgaat 144  Q
    ||||||||||||||||||| ||||||||||||||        |||||||||||||||||||||||||  ||||||| ||||| |||||| ||||||||||    
T  10265765 gctaataataagattaagagagtgaaaattttgattttttttctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaataatcacgaat 10265666  T
Q  145 tttggt 150  Q
    ||||||    
T  10265665 tttggt 10265660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 15 - 78
Target Start/End: Complemental strand, 45455668 - 45455605
Alignment:
Q  15 actaaacaaagactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaattttg 78  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||    
T  45455668 actaaacaaagactaaaacttcaaaagaaatgctaataataagatttagagagtgaaaaatttg 45455605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 22 - 240
Target Start/End: Complemental strand, 30878388 - 30878174
Alignment:
Q  22 aaagactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaattttgannnnnnnnctgtgtccaaatcaaatgatccaagattctattt 121  Q
    |||||||||||||||||||||||  |||||||||||||||||| ||||||||  |||         |||||||||||||||||||||||||  |||||||    
T  30878388 aaagactaaaacttcaaaagaaaatctaataataagattaagagagtgaaaaacttg-gtttttttctgtgtccaaatcaaatgatccaagtctctattt 30878290  T
Q  122 gtagag---gaaaaaaaatcacgaattttggtnnnnnnnnnttaaannnnnnnnnnatttgctatgaaataattgagtccaaattattaagaaaataaaa 218  Q
    ||| ||   ||||||||||||||||||||| |          ||||          || ||| | |||||||||||||||||||||||||||| ||||||    
T  30878289 gtaaagaaagaaaaaaaatcacgaattttgataaaaaaaaaataaaaaat------atctgcaacgaaataattgagtccaaattattaagaagataaaa 30878196  T
Q  219 attcaagcagccaatcgtaaca 240  Q
    |  |||||||||||||||||||    
T  30878195 acccaagcagccaatcgtaaca 30878174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 22 - 251
Target Start/End: Complemental strand, 47297347 - 47297125
Alignment:
Q  22 aaagactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaattttgannnnnnnn-ctgtgtccaaatcaaatgatccaagattctatt 120  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||||||| ||||          |||||||||||| ||||||| ||||  ||||||    
T  47297347 aaagactaaaacttcaaaagaaaagctaataataagattaagagagtgaaaaatttggtttttttttctgtgtccaaatgaaatgattcaagtctctatt 47297248  T
Q  121 tgtagaggaaaaaaaa--tcacgaattttggtnnnnnnnnnttaaannnnnnnnnnatttgctatgaaataattgagtccaaattattaagaaaataaaa 218  Q
    | ||||  ||||||||  ||||||||||||           |||||          |||||| |||||||||||||||||||||||||||||| ||||||    
T  47297247 tatagataaaaaaaaaaatcacgaattttg----------tttaaaaaaaaaaattatttgcaatgaaataattgagtccaaattattaagaagataaaa 47297158  T
Q  219 attcaagcagccaatcgtaacaagccacgtgtc 251  Q
    || |||||||||||||  |||| |||| |||||    
T  47297157 atccaagcagccaatcaaaacatgccaagtgtc 47297125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 15 - 150
Target Start/End: Original strand, 51523574 - 51523711
Alignment:
Q  15 actaaacaaagactaaaacttcaaaagaaatgctaataataagattaagatagtg-aaaattttgannnnnnnnctgtgtccaaatcaaatgatccaaga 113  Q
    |||||| ||||||||||||||||||||||| |||||||| |||||||||| |||| |||| || |          |||||| |||||||||||||||||     
T  51523574 actaaataaagactaaaacttcaaaagaaaagctaataaaaagattaagagagtgaaaaacttggtttttttttttgtgtctaaatcaaatgatccaagt 51523673  T
Q  114 ttctatttgtaga-ggaaaaaaaatcacgaattttggt 150  Q
     ||||||| |||| ||||||||||||||||||||||||    
T  51523674 ctctatttatagagggaaaaaaaatcacgaattttggt 51523711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 175 - 251
Target Start/End: Complemental strand, 10265579 - 10265503
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatcgtaacaagccacgtgtc 251  Q
    |||||| |||||||||||||||||||| ||||||||  |||||||| |||||||||||||| ||| |||||||||||    
T  10265579 atttgcaatgaaataattgagtccaaaatattaagatgataaaaatccaagcagccaatcgaaaccagccacgtgtc 10265503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 46 - 150
Target Start/End: Complemental strand, 45623262 - 45623158
Alignment:
Q  46 gctaataataagattaagatagtgaaaattttgannnnnnnnctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaatt 145  Q
    ||||||||||||||||||| ||||||||  ||||        |||||||||||||||||||||||||  ||||||| ||||| ||||||||| |||||||    
T  45623262 gctaataataagattaagagagtgaaaaacttgattttttttctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaaattacgaatt 45623163  T
Q  146 ttggt 150  Q
    |||||    
T  45623162 ttggt 45623158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 175 - 234
Target Start/End: Complemental strand, 48384780 - 48384721
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatc 234  Q
    |||||| |||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  48384780 atttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatc 48384721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 47 - 150
Target Start/End: Complemental strand, 51494204 - 51494101
Alignment:
Q  47 ctaataataagattaagatagtgaaaattttgannnnnnnnctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattt 146  Q
    |||||||||||||||||| ||||||||  ||||        |||||||||||||||||||||||||  ||||||| ||||| ||||||||| ||||||||    
T  51494204 ctaataataagattaagagagtgaaaaacttgattttttttctgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaaattacgaattt 51494105  T
Q  147 tggt 150  Q
    ||||    
T  51494104 tggt 51494101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 186 - 251
Target Start/End: Complemental strand, 17675913 - 17675848
Alignment:
Q  186 aataattgagtccaaattattaagaaaataaaaattcaagcagccaatcgtaacaagccacgtgtc 251  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||  |||| |||| |||||    
T  17675913 aataattgagtccaaattattaagaagataaaaattcaagcagccaatcaaaacatgccaagtgtc 17675848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 88 - 149
Target Start/End: Original strand, 45242433 - 45242494
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttgg 149  Q
    |||||||||||||||||||||||||  ||||||| ||||||||||||||||| |||||||||    
T  45242433 ctgtgtccaaatcaaatgatccaagtctctatttatagaggaaaaaaaatcatgaattttgg 45242494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 175 - 234
Target Start/End: Original strand, 31159891 - 31159950
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatc 234  Q
    |||||| |||||||||||| ||||||||||||||||| |||||||| |||||||||||||    
T  31159891 atttgcaatgaaataattgggtccaaattattaagaagataaaaatccaagcagccaatc 31159950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 175 - 234
Target Start/End: Complemental strand, 45455512 - 45455453
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatc 234  Q
    |||||| |||||||||||||||||||||||||||||| | |||||| |||||||||||||    
T  45455512 atttgcaatgaaataattgagtccaaattattaagaagaaaaaaatccaagcagccaatc 45455453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 15 - 73
Target Start/End: Original strand, 36231222 - 36231280
Alignment:
Q  15 actaaacaaagactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaa 73  Q
    |||||| |||||||||||||||||||||||  |||||||||||||||||| ||||||||    
T  36231222 actaaataaagactaaaacttcaaaagaaaaactaataataagattaagagagtgaaaa 36231280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 89 - 150
Target Start/End: Complemental strand, 643540 - 643479
Alignment:
Q  89 tgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    ||||||||||||||||||||||||  ||||||| ||||| ||||||||||| ||||||||||    
T  643540 tgtgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaaatcatgaattttggt 643479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 89 - 150
Target Start/End: Complemental strand, 17676033 - 17675973
Alignment:
Q  89 tgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    ||||||||||||||||||||||||  ||||||| |||| |||||||||||||||||||||||    
T  17676033 tgtgtccaaatcaaatgatccaagtctctatttataga-gaaaaaaaatcacgaattttggt 17675973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 46 - 147
Target Start/End: Original strand, 29919708 - 29919809
Alignment:
Q  46 gctaataataagattaagatagtgaaaattttgannnnnnnnctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaatt 145  Q
    ||||||||||||||||||| |||||||| |||||        |||||| ||||||||||||||||||  ||||||| |||||  |||||||| |||||||    
T  29919708 gctaataataagattaagagagtgaaaaatttgattttttttctgtgttcaaatcaaatgatccaagtctctatttatagagagaaaaaaattacgaatt 29919807  T
Q  146 tt 147  Q
    ||    
T  29919808 tt 29919809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 175 - 251
Target Start/End: Original strand, 8471676 - 8471752
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatcgtaacaagccacgtgtc 251  Q
    |||||| |||||||||||||||||||| ||||||||  |||||||||||| ||| |||||| |||  ||||||||||    
T  8471676 atttgcaatgaaataattgagtccaaaatattaagatgataaaaattcaaacagtcaatcgaaacgcgccacgtgtc 8471752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 175 - 251
Target Start/End: Original strand, 36231384 - 36231460
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatcgtaacaagccacgtgtc 251  Q
    |||||| ||||||||||||||| |||| ||||||||  |||||||| |||||||||||||| |||  ||||||||||    
T  36231384 atttgcaatgaaataattgagttcaaaatattaagatgataaaaatccaagcagccaatcgaaacgcgccacgtgtc 36231460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 175 - 234
Target Start/End: Original strand, 37823068 - 37823127
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatc 234  Q
    |||||| |||||||||||||||||||||||||||||| ||||||||  |||||| |||||    
T  37823068 atttgcaatgaaataattgagtccaaattattaagaagataaaaatctaagcagtcaatc 37823127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 175 - 234
Target Start/End: Complemental strand, 45623133 - 45623074
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatc 234  Q
    |||||| |||||||||||| ||||||||||||||||| |||||||| | |||||||||||    
T  45623133 atttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatc 45623074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 88 - 150
Target Start/End: Complemental strand, 19578601 - 19578540
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    |||||||||||||||||||||||||  ||||||| |||| |||||||||| ||||||||||||    
T  19578601 ctgtgtccaaatcaaatgatccaagtctctatttataga-gaaaaaaaattacgaattttggt 19578540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 88 - 150
Target Start/End: Complemental strand, 27630031 - 27629969
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    ||||||||||||||||||| |||||  ||||||| ||||| ||||||||||| ||||||||||    
T  27630031 ctgtgtccaaatcaaatgaaccaagtctctatttatagagaaaaaaaaatcatgaattttggt 27629969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 88 - 150
Target Start/End: Original strand, 31471569 - 31471631
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    ||||||||||||||||||| |||||  ||||||| ||||| ||||||||||| ||||||||||    
T  31471569 ctgtgtccaaatcaaatgaaccaagtctctatttatagagaaaaaaaaatcatgaattttggt 31471631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 88 - 150
Target Start/End: Original strand, 36231305 - 36231367
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    |||||||||||||||||||||||||  ||||||| || || ||||||||||| ||||||||||    
T  36231305 ctgtgtccaaatcaaatgatccaagtctctatttatatagaaaaaaaaatcatgaattttggt 36231367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 88 - 150
Target Start/End: Complemental strand, 37419915 - 37419853
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    ||||||||||||||||||| |||||  ||||||| ||||| ||||||||||| ||||||||||    
T  37419915 ctgtgtccaaatcaaatgaaccaagtctctatttatagagaaaaaaaaatcatgaattttggt 37419853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 175 - 236
Target Start/End: Original strand, 33167678 - 33167739
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatcgt 236  Q
    |||||| ||||||||||| |||| ||||||||||||| |||||||| ||| |||||||||||    
T  33167678 atttgcaatgaaataattaagtctaaattattaagaagataaaaatccaaccagccaatcgt 33167739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 46 - 147
Target Start/End: Complemental strand, 48384910 - 48384809
Alignment:
Q  46 gctaataataagattaagatagtgaaaattttgannnnnnnnctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaatt 145  Q
    |||||| |||||||||||| ||||||||  ||||        ||| |||||||||||||||||||||  ||||||| ||||| ||||||||| |||||||    
T  48384910 gctaatgataagattaagagagtgaaaaacttgattttttttctgcgtccaaatcaaatgatccaagtctctatttatagagaaaaaaaaattacgaatt 48384811  T
Q  146 tt 147  Q
    ||    
T  48384810 tt 48384809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 226
Target Start/End: Complemental strand, 2474726 - 2474675
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagc 226  Q
    |||||| |||||||||||||||||||| ||||||||| |||||||| |||||    
T  2474726 atttgcaatgaaataattgagtccaaagtattaagaagataaaaatccaagc 2474675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 234
Target Start/End: Original strand, 14097157 - 14097216
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatc 234  Q
    |||||| |||||||||||| ||||||||||||||||| |||||||| | |||| ||||||    
T  14097157 atttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcaaccaatc 14097216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 234
Target Start/End: Original strand, 29919830 - 29919889
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatc 234  Q
    |||||| |||||||||||| ||||||||||||||||| |||||||| | || ||||||||    
T  29919830 atttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagtagccaatc 29919889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 234
Target Start/End: Complemental strand, 37690900 - 37690841
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatc 234  Q
    |||||| |||||||||||| ||||||||||||||||| |||||||| | ||||| |||||    
T  37690900 atttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagtcaatc 37690841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 150
Target Start/End: Complemental strand, 37691026 - 37690924
Alignment:
Q  46 gctaataataagattaagatagtgaaaattttgannnnnnnnctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaatt 145  Q
    ||||||||||||||||||| ||||||||  ||||        |||||||||||||||||||||||||  ||||||| |||| |||||||| | |||||||    
T  37691026 gctaataataagattaagagagtgaaaaacttgattttttt-ctgtgtccaaatcaaatgatccaagtctctatttataga-gaaaaaaatttacgaatt 37690929  T
Q  146 ttggt 150  Q
    |||||    
T  37690928 ttggt 37690924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 234
Target Start/End: Complemental strand, 51494075 - 51494016
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatc 234  Q
    |||||| |||||||||||| ||||||||||||||||| |||||||| | ||||| |||||    
T  51494075 atttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagtcaatc 51494016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 88 - 150
Target Start/End: Original strand, 17786627 - 17786689
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    |||||| |||||||||||| |||||  ||||||| ||||| ||||||||||| ||||||||||    
T  17786627 ctgtgtacaaatcaaatgaaccaagtctctatttatagagaaaaaaaaatcatgaattttggt 17786689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 175 - 220
Target Start/End: Complemental strand, 19578523 - 19578478
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaat 220  Q
    |||||| |||||||||||| ||||||||||||||||| ||||||||    
T  19578523 atttgcaatgaaataattgggtccaaattattaagaagataaaaat 19578478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 89 - 150
Target Start/End: Original strand, 48729816 - 48729876
Alignment:
Q  89 tgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    ||||||||||| |||||| ||||| | |||||| ||||||||||||||||| ||||||||||    
T  48729816 tgtgtccaaattaaatgaaccaag-tcctatttatagaggaaaaaaaatcatgaattttggt 48729876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 175 - 240
Target Start/End: Original strand, 51523721 - 51523786
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatcgtaaca 240  Q
    |||||| |||||| |||||||| |||| ||||||||  ||||||||  ||||||||||||||||||    
T  51523721 atttgcaatgaaaaaattgagtacaaaatattaagatgataaaaatcgaagcagccaatcgtaaca 51523786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 175 - 211
Target Start/End: Complemental strand, 17675951 - 17675915
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaa 211  Q
    |||||| ||||||||||||||||||||||||||||||    
T  17675951 atttgcaatgaaataattgagtccaaattattaagaa 17675915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 148
Target Start/End: Original strand, 38212736 - 38212796
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttg 148  Q
    |||||||| ||||||||||  ||||||||||||| ||||  ||||||||||| ||||||||    
T  38212736 ctgtgtcctaatcaaatgaaacaagattctatttatagacaaaaaaaaatcatgaattttg 38212796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 91 - 150
Target Start/End: Complemental strand, 37646125 - 37646067
Alignment:
Q  91 tgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    |||||||||||||||| |||||  ||||||| |||| |||||||||||| ||||||||||    
T  37646125 tgtccaaatcaaatgaaccaagtctctatttataga-gaaaaaaaatcatgaattttggt 37646067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 234
Target Start/End: Complemental strand, 3754656 - 3754598
Alignment:
Q  176 tttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatc 234  Q
    ||||| ||||||||||||||| |||||| ||||||  ||||||||||| ||| ||||||    
T  3754656 tttgcaatgaaataattgagttcaaatttttaagatgataaaaattcaggcaaccaatc 3754598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 150
Target Start/End: Original strand, 8464948 - 8465009
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    ||||||||||||||||||| |||||  ||||||| |||| |||||||| ||| ||||||||||    
T  8464948 ctgtgtccaaatcaaatgaaccaagtctctatttataga-gaaaaaaattcatgaattttggt 8465009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 150
Target Start/End: Original strand, 31159772 - 31159871
Alignment:
Q  46 gctaataataagattaagatagtgaaaattttgannnnnnnnctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaatt 145  Q
    ||||||||||||||||||| ||||||||  ||||        |||||||||||||||||||||||||  ||||    ||||| ||||||||| |||||||    
T  31159772 gctaataataagattaagagagtgaaaaacttgattttttt-ctgtgtccaaatcaaatgatccaagtctcta----tagagaaaaaaaaattacgaatt 31159866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 150
Target Start/End: Complemental strand, 52930383 - 52930322
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    |||||| |||||||||||| |||||  ||||||| |||| |||||||||||| ||||||||||    
T  52930383 ctgtgttcaaatcaaatgaaccaagtctctatttataga-gaaaaaaaatcatgaattttggt 52930322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 31159730 - 31159767
Alignment:
Q  15 actaaacaaagactaaaacttcaaaagaaatgctaata 52  Q
    |||||| ||| |||||||||||||||||||||||||||    
T  31159730 actaaataaacactaaaacttcaaaagaaatgctaata 31159767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 48407667 - 48407704
Alignment:
Q  15 actaaacaaagactaaaacttcaaaagaaatgctaata 52  Q
    |||||| ||||||||||||||||||||||| |||||||    
T  48407667 actaaataaagactaaaacttcaaaagaaaagctaata 48407704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 175 - 251
Target Start/End: Complemental strand, 109832 - 109756
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatcgtaacaagccacgtgtc 251  Q
    |||||| |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  109832 atttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtc 109756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 88 - 150
Target Start/End: Complemental strand, 109907 - 109845
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    |||||||||||||||||||||||||  ||||||| |||||  |||||||||||||||||||||    
T  109907 ctgtgtccaaatcaaatgatccaagtctctatttatagagagaaaaaaatcacgaattttggt 109845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1454 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold1454
Description:

Target: scaffold1454; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 15 - 73
Target Start/End: Original strand, 577 - 635
Alignment:
Q  15 actaaacaaagactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaa 73  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||    
T  577 actaaacaaagactaaaacttcaaaagaaatgctaataataagatcaagagagtgaaaa 635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 15 - 127
Target Start/End: Original strand, 106142 - 106254
Alignment:
Q  15 actaaacaaagactaaaacttcaaaagaaatgctaataataagattaagatagtgaaaattttgannnnnnnnctgtgtccaaatcaaatgatccaagat 114  Q
    |||||||||||||||||||||||||||||  |||||| |||||||||||| |||||||| | |||        |||||| ||||||||||||||||||      
T  106142 actaaacaaagactaaaacttcaaaagaatggctaattataagattaagagagtgaaaaatatgattttttttctgtgtgcaaatcaaatgatccaagtc 106241  T
Q  115 tctatttgtagag 127  Q
    ||||||| |||||    
T  106242 tctatttatagag 106254  T

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Target: scaffold0004; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 175 - 234
Target Start/End: Original strand, 106298 - 106357
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatc 234  Q
    |||||| |||||||||||||||||||||||||||||| |||||||| ||  |||||||||    
T  106298 atttgcaatgaaataattgagtccaaattattaagaagataaaaatccagccagccaatc 106357  T

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Target: scaffold1183 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold1183
Description:

Target: scaffold1183; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 88 - 238
Target Start/End: Original strand, 26 - 176
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggtnnnnnnnnnttaaannnnnnnnnnatttgctatgaaa 187  Q
    ||||||||||||||||||| |||||  ||||||| ||||  ||||||||||| ||||||||||         |||||          |||||| ||||||    
T  26 ctgtgtccaaatcaaatgaaccaagtatctatttatagacaaaaaaaaatcatgaattttggtaaaaaaaaattaaaaaaaaaaattatttgcaatgaaa 125  T
Q  188 taattgagtccaaattattaagaaaataaaaattcaagcagccaatcgtaa 238  Q
    |||||||||| ||||||||||||  |||||||| |||| ||||||||||||    
T  126 taattgagtcaaaattattaagatgataaaaatccaagaagccaatcgtaa 176  T

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Target: scaffold0015 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 175 - 234
Target Start/End: Complemental strand, 83522 - 83463
Alignment:
Q  175 atttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatc 234  Q
    |||||| |||||||||||||||||||||||||||||| |||||||| ||  |||||||||    
T  83522 atttgcaatgaaataattgagtccaaattattaagaagataaaaatccagccagccaatc 83463  T

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Target: scaffold0758 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0758
Description:

Target: scaffold0758; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 88 - 150
Target Start/End: Complemental strand, 6409 - 6348
Alignment:
Q  88 ctgtgtccaaatcaaatgatccaagattctatttgtagaggaaaaaaaatcacgaattttggt 150  Q
    ||||||||||||||||||| |||||  ||||||| |||| |||||||||||| ||||||||||    
T  6409 ctgtgtccaaatcaaatgaaccaagtctctatttataga-gaaaaaaaatcatgaattttggt 6348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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