View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1490_low_23 (Length: 335)
Name: NF1490_low_23
Description: NF1490
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1490_low_23 |
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Alignment Details
Target: chr8 (Bit Score: 253; Significance: 1e-140; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 1 - 323
Target Start/End: Original strand, 7631560 - 7631877
Alignment:
| Q |
1 |
tgaaggaagtaaatgggtcaagactgattctgaatgtaaattcattttcacattcatatttatgcaacaacataattataaatatcatactctatatgga |
100 |
Q |
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| T |
7631560 |
tgaaggaagtaaatgggtcaagactgattctgaatgtaaattcattttcacattcatatttatgcaacaacataattataaacatcatactctatatgga |
7631659 |
T |
|
| Q |
101 |
ctaatgaagttttttcttcttcttgcagatattgttctagagatataattctgcatctatttttagtacacctttgttagtgcatttcaaggtaaactat |
200 |
Q |
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| T |
7631660 |
ctaatgaggttttttcttcttcttgcagatattgttctagagatataattctgcatctatttttagtacacctttgttagtgcatttcaaggtaaactat |
7631759 |
T |
|
| Q |
201 |
tcaagatggtgaataaagcataaagtacttannnnnnnnnnnnnnnnnnnattctaatctaatcaataatttacatgtaagaattaagtagaagtgtgtc |
300 |
Q |
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||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7631760 |
tcaagatggtgaataaagcataaagtactta-----ttttgttttgttttattctaatctaatcaataatttacatgtaagaattaagtagaagtgtgtc |
7631854 |
T |
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| Q |
301 |
cattttataagagttatttatga |
323 |
Q |
| |
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||||||||||||||||||||||| |
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| T |
7631855 |
cattttataagagttatttatga |
7631877 |
T |
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