View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14912_high_24 (Length: 280)
Name: NF14912_high_24
Description: NF14912
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14912_high_24 |
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Alignment Details
Target: chr2 (Bit Score: 255; Significance: 1e-142; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 9 - 267
Target Start/End: Original strand, 40593353 - 40593611
Alignment:
| Q |
9 |
aatgtgtaataattaactaaacgtgtaataattgtattagtaaataaataaagcgttactaatttatcaaaggagtttggatctaccggaaggagccaga |
108 |
Q |
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| T |
40593353 |
aatgtgtaataattaactaaacgtgtaataattgtattagtaaataaataaagcgttactaatttatcaaaggagtttggatctaccggaaggagccaga |
40593452 |
T |
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| Q |
109 |
cttctccgaagagaccaatcaatgttcaaattctgcctagaagatatattcatatttagtgtctaacggcgtctcaaatagtaaaaccaaacaatgtgta |
208 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
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| T |
40593453 |
cttctccgaagagaccaatcaatgttcaaattctgcctagaagatatattcatatttagtgtctaacggtgtctcaaatagtaaaaccaaacaatgtgta |
40593552 |
T |
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| Q |
209 |
atgatttgcactacacaaaaatctagctaaaacattggaagcaaattttatctaccttc |
267 |
Q |
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| T |
40593553 |
atgatttgcactacacaaaaatctagctaaaacattggaagcaaattttatctaccttc |
40593611 |
T |
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