View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14912_high_34 (Length: 244)
Name: NF14912_high_34
Description: NF14912
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14912_high_34 |
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Alignment Details
Target: chr2 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 17 - 230
Target Start/End: Original strand, 40592992 - 40593205
Alignment:
| Q |
17 |
acttattgacctcaagaatcaccgtcgaatcccaactcctccttctcggaaggactttgcgaaacccggtggatctagccattttggtgtcaatgacgat |
116 |
Q |
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| T |
40592992 |
acttattgacctcaagaatcaccatcgaatcccaactcctccttctcggaaggactttgggaaacccggtggatctagccattttggtgtcaatgacgat |
40593091 |
T |
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| Q |
117 |
aatgatcatcattacatacctcgcaaggattacggtacgcatcctggcaatggatgaattggtctacgactacgagaagaagatatatatgcaataagtt |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40593092 |
aatgatcatcattacatacctcgcaaggattacggtacgcatcctggcaatggatgaattggtctacgactacgagaagaagatatatatgcaataagtt |
40593191 |
T |
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| Q |
217 |
gtaagttacctttg |
230 |
Q |
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||||||||| |||| |
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| T |
40593192 |
gtaagttacttttg |
40593205 |
T |
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