View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF14912_low_13 (Length: 402)
Name: NF14912_low_13
Description: NF14912
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14912_low_13 |
 | |
|
| [»] chr7 (7 HSPs) |
| |
|
| [»] chr1 (3 HSPs) |
| |
|
| [»] chr5 (7 HSPs) |
| |
|
Alignment Details
Target: chr7 (Bit Score: 368; Significance: 0; HSPs: 7)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 368; E-Value: 0
Query Start/End: Original strand, 19 - 402
Target Start/End: Complemental strand, 5289899 - 5289516
Alignment:
| Q |
19 |
atgtatctaacagaagaaattttgaaagaaaatcctagtgtttgtgaatacatggccccttcattggatgctaggcaagacatggtggtggtagaggtac |
118 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5289899 |
atgtatctaacagaagaaattttgaaagaaaatccaagtgtttgtgaatacatggccccttcattggatgctaggcaagacatggtggtggtagaggtac |
5289800 |
T |
|
| Q |
119 |
ctagactaggaaaggaggctgcagtgaaagctataaaagaatggggtcaaccaaagtcaaagattactcacttaatcgtttgcaccacaagtggtgtaga |
218 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5289799 |
ctagactaggaaaggaggctgcagtgaaggctataaaagaatggggtcaaccaaagtcaaagattactcacttaatcgtttgcaccacaagtggtgtaga |
5289700 |
T |
|
| Q |
219 |
catgcctggagccgattatcaactcacaaaactcttgggtcttcgcccatatgtgaaaaggtacatgatgtaccaacaagggtgttttgcaggtggcacg |
318 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
5289699 |
catgcctggagccgattatcaactcacaaaactcttgggtcttcgtccatatgtgaaaaggtatatgatgtaccaacaagggtgttttgcaggtggcacg |
5289600 |
T |
|
| Q |
319 |
gtgcttcgtttggccaaagatttggctgagaacaacaaaggtgctcgtgtgttggttgtttgttctgaagtcaccgctgtcaca |
402 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5289599 |
gtgcttcgtttggccaaagatttggctgagaacaacaaaggtgctcgtgtgttggttgtttgttctgaagtcaccgctgtcaca |
5289516 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 352; E-Value: 0
Query Start/End: Original strand, 19 - 402
Target Start/End: Original strand, 5284228 - 5284611
Alignment:
| Q |
19 |
atgtatctaacagaagaaattttgaaagaaaatcctagtgtttgtgaatacatggccccttcattggatgctaggcaagacatggtggtggtagaggtac |
118 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
5284228 |
atgtatctaacagaagaaattttgaaaaaaaatcctagtgtttgtgaatacatggccccttcattggatgcaaggcaagacatggtggtggtagaggtac |
5284327 |
T |
|
| Q |
119 |
ctagactaggaaaggaggctgcagtgaaagctataaaagaatggggtcaaccaaagtcaaagattactcacttaatcgtttgcaccacaagtggtgtaga |
218 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5284328 |
ctagactaggaaaggaggctgcagtgaaggctataaaagaatggggccaaccaaagtcaaagattactcacttaatcgtttgcaccacaagtggtgtaga |
5284427 |
T |
|
| Q |
219 |
catgcctggagccgattatcaactcacaaaactcttgggtcttcgcccatatgtgaaaaggtacatgatgtaccaacaagggtgttttgcaggtggcacg |
318 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
5284428 |
catgcctggagccgattatcaactcaccaaactcttgggtcttcgcccatatgtgaaaaggtacatgatgtaccaacaagggtgttttgcaggtggtacg |
5284527 |
T |
|
| Q |
319 |
gtgcttcgtttggccaaagatttggctgagaacaacaaaggtgctcgtgtgttggttgtttgttctgaagtcaccgctgtcaca |
402 |
Q |
| |
|
|| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5284528 |
gtacttcgtttggccaaagatttagctgagaacaacaaaggtgctcgtgtgttggttgtttgttctgaagtcaccgctgtcaca |
5284611 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 348; E-Value: 0
Query Start/End: Original strand, 19 - 402
Target Start/End: Original strand, 5310317 - 5310700
Alignment:
| Q |
19 |
atgtatctaacagaagaaattttgaaagaaaatcctagtgtttgtgaatacatggccccttcattggatgctaggcaagacatggtggtggtagaggtac |
118 |
Q |
| |
|
|||||||||||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
5310317 |
atgtatctaacagaggagattttgaaagaaaatcctagtgtttgtgaatacatggcaccttcattggatgcaaggcaagacatggtggtggtagaggtac |
5310416 |
T |
|
| Q |
119 |
ctagactaggaaaggaggctgcagtgaaagctataaaagaatggggtcaaccaaagtcaaagattactcacttaatcgtttgcaccacaagtggtgtaga |
218 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5310417 |
ctagactaggaaaggaggctgcagtgaaggctataaaagaatggggtcaaccaaagtcaaagattactcacttaatcgtttgcaccacaagtggtgtaga |
5310516 |
T |
|
| Q |
219 |
catgcctggagccgattatcaactcacaaaactcttgggtcttcgcccatatgtgaaaaggtacatgatgtaccaacaagggtgttttgcaggtggcacg |
318 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
5310517 |
catgcctggagctgattatcaactcacaaaactcttgggccttcgtccatatgtgaaaaggtatatgatgtaccaacaagggtgttttgcaggtggcacg |
5310616 |
T |
|
| Q |
319 |
gtgcttcgtttggccaaagatttggctgagaacaacaaaggtgctcgtgtgttggttgtttgttctgaagtcaccgctgtcaca |
402 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5310617 |
gtgcttcgtttggccaaagatttggctgagaacaacaaaggtgctcgtgtgttggttgtttgttctgaagtcaccgctgtcaca |
5310700 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 344; E-Value: 0
Query Start/End: Original strand, 19 - 402
Target Start/End: Original strand, 5302416 - 5302799
Alignment:
| Q |
19 |
atgtatctaacagaagaaattttgaaagaaaatcctagtgtttgtgaatacatggccccttcattggatgctaggcaagacatggtggtggtagaggtac |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5302416 |
atgtatctaacagaagaaattttgaaagaaaatcctagtgtttgtgaatacatggccccttcattggatgctaggcaagacatggtggtggtagaggtac |
5302515 |
T |
|
| Q |
119 |
ctagactaggaaaggaggctgcagtgaaagctataaaagaatggggtcaaccaaagtcaaagattactcacttaatcgtttgcaccacaagtggtgtaga |
218 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5302516 |
ctagactaggaaaggaggctgcagtgaaggctataaaagaatggggtcaaccaaagtcaaagattactcacttaatcgtttgcaccacaagtggtgtaga |
5302615 |
T |
|
| Q |
219 |
catgcctggagccgattatcaactcacaaaactcttgggtcttcgcccatatgtgaaaaggtacatgatgtaccaacaagggtgttttgcaggtggcacg |
318 |
Q |
| |
|
|||||| | ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5302616 |
catgcccgaagctgattatcaactcaccaaactcttgggtcttcgcccatatgtgaaaaggtacatgatgtaccaacaagggtgttttgcaggtggcacg |
5302715 |
T |
|
| Q |
319 |
gtgcttcgtttggccaaagatttggctgagaacaacaaaggtgctcgtgtgttggttgtttgttctgaagtcaccgctgtcaca |
402 |
Q |
| |
|
||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||| |
|
|
| T |
5302716 |
gtgcttcgtttggccaaagatctagctgagaacaacaaaggtgctcgtgtgttggttgtatgttcagaggtcaccgctgtcaca |
5302799 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 340; E-Value: 0
Query Start/End: Original strand, 19 - 402
Target Start/End: Original strand, 5315031 - 5315414
Alignment:
| Q |
19 |
atgtatctaacagaagaaattttgaaagaaaatcctagtgtttgtgaatacatggccccttcattggatgctaggcaagacatggtggtggtagaggtac |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5315031 |
atgtatctaacagaagaaattttgaaagaaaatcctagtgtttgtgaatacatggccccttcattggatgctaggcaagacatggtggtggtagaggtac |
5315130 |
T |
|
| Q |
119 |
ctagactaggaaaggaggctgcagtgaaagctataaaagaatggggtcaaccaaagtcaaagattactcacttaatcgtttgcaccacaagtggtgtaga |
218 |
Q |
| |
|
|||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
5315131 |
ctagactagggaaggaggctgcagtgaaggctataaaagaatggggtcaaccaaagtcaaagattactcacttaatcgtttgcaccacaagtggtgttga |
5315230 |
T |
|
| Q |
219 |
catgcctggagccgattatcaactcacaaaactcttgggtcttcgcccatatgtgaaaaggtacatgatgtaccaacaagggtgttttgcaggtggcacg |
318 |
Q |
| |
|
|||||||||||| |||||||||||||| ||||| || ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
5315231 |
catgcctggagcagattatcaactcaccaaactattaggtcttcgcccatatgtgaaaagatacatgatgtaccaacaagggtgctttgcaggtggcacg |
5315330 |
T |
|
| Q |
319 |
gtgcttcgtttggccaaagatttggctgagaacaacaaaggtgctcgtgtgttggttgtttgttctgaagtcaccgctgtcaca |
402 |
Q |
| |
|
||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5315331 |
gtgctccgtttggctaaagatttggctgagaacaacaaaggtgctcgtgtgttggttgtttgttctgaagtcaccgctgtcaca |
5315414 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 19 - 402
Target Start/End: Complemental strand, 46707190 - 46706807
Alignment:
| Q |
19 |
atgtatctaacagaagaaattttgaaagaaaatcctagtgtttgtgaatacatggccccttcattggatgctaggcaagacatggtggtggtagaggtac |
118 |
Q |
| |
|
||||| |||||| | || ||||||||||| ||||| |||||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
46707190 |
atgtacctaacataggagattttgaaagagaatcccagtgtttgtgaatatatggcaccttcattggatgccaggcaagacatggtggtggtagaggtac |
46707091 |
T |
|
| Q |
119 |
ctagactaggaaaggaggctgcagtgaaagctataaaagaatggggtcaaccaaagtcaaagattactcacttaatcgtttgcaccacaagtggtgtaga |
218 |
Q |
| |
|
|||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||| |
|
|
| T |
46707090 |
ctagactagggaaggaggctgcagtgaaggctataaaagaatggggtcaaccaaagtcaaagattacccacttaatcgtttgcactactagtggtgtaga |
46706991 |
T |
|
| Q |
219 |
catgcctggagccgattatcaactcacaaaactcttgggtcttcgcccatatgtgaaaaggtacatgatgtaccaacaagggtgttttgcaggtggcacg |
318 |
Q |
| |
|
|||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| || |||||||| |||||| |
|
|
| T |
46706990 |
catgcctggagctgattaccaactcacaaaactcttcggtcttcgcccatatgtgaaaaggtatatgatgtaccaacaaggttgctttgcaggaggcacg |
46706891 |
T |
|
| Q |
319 |
gtgcttcgtttggccaaagatttggctgagaacaacaaaggtgctcgtgtgttggttgtttgttctgaagtcaccgctgtcaca |
402 |
Q |
| |
|
| |||||||||||| || |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| || |||||| |
|
|
| T |
46706890 |
gggcttcgtttggctaacgatttggctgagaacaacaaaggtgcccgtgtattggttgtttgttctgaagtcactgcagtcaca |
46706807 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 210 - 357
Target Start/End: Complemental strand, 32531019 - 32530872
Alignment:
| Q |
210 |
tggtgtagacatgcctggagccgattatcaactcacaaaactcttgggtcttcgcccatatgtgaaaaggtacatgatgtaccaacaagggtgttttgca |
309 |
Q |
| |
|
||||||||||||||| || |||||||| |||||||| |||||||| || || |||| ||| ||| | ||||||||| |||||||| ||||| ||| |
|
|
| T |
32531019 |
tggtgtagacatgccgggtgccgattaccaactcactaaactcttaggcctaaaaccatctgtcaaacgtctcatgatgtatcaacaaggttgtttcgca |
32530920 |
T |
|
| Q |
310 |
ggtggcacggtgcttcgtttggccaaagatttggctgagaacaacaaa |
357 |
Q |
| |
|
|| ||||| || || || || || |||||| | |||||||| |||||| |
|
|
| T |
32530919 |
ggcggcacagttctccgcttagcgaaagatcttgctgagaataacaaa |
32530872 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 292; Significance: 1e-164; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 292; E-Value: 1e-164
Query Start/End: Original strand, 19 - 402
Target Start/End: Original strand, 44128494 - 44128877
Alignment:
| Q |
19 |
atgtatctaacagaagaaattttgaaagaaaatcctagtgtttgtgaatacatggccccttcattggatgctaggcaagacatggtggtggtagaggtac |
118 |
Q |
| |
|
||||| |||||||| || ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44128494 |
atgtacctaacagaggagattttgaaagagaatcctagtgtttgtgaatacatggcaccttcattggatgctaggcaagacatggtggtggtagaggtac |
44128593 |
T |
|
| Q |
119 |
ctagactaggaaaggaggctgcagtgaaagctataaaagaatggggtcaaccaaagtcaaagattactcacttaatcgtttgcaccacaagtggtgtaga |
218 |
Q |
| |
|
|||||||||| ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
44128594 |
ctagactagggaaggaggctgcagtgaaggccataaaagaatggggtcaaccaaagtcaaagattactcacttgatcgtttgcaccacaagtggtgtaga |
44128693 |
T |
|
| Q |
219 |
catgcctggagccgattatcaactcacaaaactcttgggtcttcgcccatatgtgaaaaggtacatgatgtaccaacaagggtgttttgcaggtggcacg |
318 |
Q |
| |
|
|||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| || |||||||| |||||| |
|
|
| T |
44128694 |
catgcctggagctgattaccaactcacaaaactcttaggtcttcgcccatatgtgaaaaggtatatgatgtaccaacaaggttgctttgcaggaggcacg |
44128793 |
T |
|
| Q |
319 |
gtgcttcgtttggccaaagatttggctgagaacaacaaaggtgctcgtgtgttggttgtttgttctgaagtcaccgctgtcaca |
402 |
Q |
| |
|
|| ||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||| || |||||| |
|
|
| T |
44128794 |
gtccttcgtttggctaaagatttagctgaaaacaacaaaggtgctcgtgtgttggttgtctgttctgaagtcactgcagtcaca |
44128877 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 292; E-Value: 1e-164
Query Start/End: Original strand, 19 - 402
Target Start/End: Original strand, 44132699 - 44133082
Alignment:
| Q |
19 |
atgtatctaacagaagaaattttgaaagaaaatcctagtgtttgtgaatacatggccccttcattggatgctaggcaagacatggtggtggtagaggtac |
118 |
Q |
| |
|
||||| |||||||| || ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44132699 |
atgtacctaacagaggagattttgaaagagaatcctagtgtttgtgaatacatggcaccttcattggatgctaggcaagacatggtggtggtagaggtac |
44132798 |
T |
|
| Q |
119 |
ctagactaggaaaggaggctgcagtgaaagctataaaagaatggggtcaaccaaagtcaaagattactcacttaatcgtttgcaccacaagtggtgtaga |
218 |
Q |
| |
|
|||||||||| ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
44132799 |
ctagactagggaaggaggctgcagtgaaggccataaaagaatggggtcaaccaaagtcaaagattactcacttgatcgtttgcaccacaagtggtgtaga |
44132898 |
T |
|
| Q |
219 |
catgcctggagccgattatcaactcacaaaactcttgggtcttcgcccatatgtgaaaaggtacatgatgtaccaacaagggtgttttgcaggtggcacg |
318 |
Q |
| |
|
|||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| || |||||||| |||||| |
|
|
| T |
44132899 |
catgcctggagctgattaccaactcacaaaactcttaggtcttcgcccatatgtgaaaaggtatatgatgtaccaacaaggttgctttgcaggaggcacg |
44132998 |
T |
|
| Q |
319 |
gtgcttcgtttggccaaagatttggctgagaacaacaaaggtgctcgtgtgttggttgtttgttctgaagtcaccgctgtcaca |
402 |
Q |
| |
|
|| ||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||| || |||||| |
|
|
| T |
44132999 |
gtccttcgtttggctaaagatttagctgaaaacaacaaaggtgctcgtgtgttggttgtctgttctgaagtcactgcagtcaca |
44133082 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 292; E-Value: 1e-164
Query Start/End: Original strand, 19 - 402
Target Start/End: Original strand, 44141121 - 44141504
Alignment:
| Q |
19 |
atgtatctaacagaagaaattttgaaagaaaatcctagtgtttgtgaatacatggccccttcattggatgctaggcaagacatggtggtggtagaggtac |
118 |
Q |
| |
|
||||| |||||||| || ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
44141121 |
atgtacctaacagaggagattttgaaagagaatcctagtgtttgtgaatacatggcaccttcattggatgctaggcaagacatggtggtggtagaggtac |
44141220 |
T |
|
| Q |
119 |
ctagactaggaaaggaggctgcagtgaaagctataaaagaatggggtcaaccaaagtcaaagattactcacttaatcgtttgcaccacaagtggtgtaga |
218 |
Q |
| |
|
|||||||||| ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
44141221 |
ctagactagggaaggaggctgcagtgaaggccataaaagaatggggtcaaccaaagtcaaagattactcacttgatcgtttgcaccacaagtggtgtaga |
44141320 |
T |
|
| Q |
219 |
catgcctggagccgattatcaactcacaaaactcttgggtcttcgcccatatgtgaaaaggtacatgatgtaccaacaagggtgttttgcaggtggcacg |
318 |
Q |
| |
|
|||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| || |||||||| |||||| |
|
|
| T |
44141321 |
catgcctggagctgattaccaactcacaaaactcttaggtcttcgcccatatgtgaaaaggtatatgatgtaccaacaaggttgctttgcaggaggcacg |
44141420 |
T |
|
| Q |
319 |
gtgcttcgtttggccaaagatttggctgagaacaacaaaggtgctcgtgtgttggttgtttgttctgaagtcaccgctgtcaca |
402 |
Q |
| |
|
|| ||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||| || |||||| |
|
|
| T |
44141421 |
gtccttcgtttggctaaagatttagctgaaaacaacaaaggtgctcgtgtgttggttgtctgttctgaagtcactgcagtcaca |
44141504 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 284; Significance: 1e-159; HSPs: 7)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 19 - 402
Target Start/End: Original strand, 1492088 - 1492471
Alignment:
| Q |
19 |
atgtatctaacagaagaaattttgaaagaaaatcctagtgtttgtgaatacatggccccttcattggatgctaggcaagacatggtggtggtagaggtac |
118 |
Q |
| |
|
|||||||||||||| || ||||| ||||| ||||||| |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| |||| |
|
|
| T |
1492088 |
atgtatctaacagaggagattttaaaagagaatcctaatgtttgtgaatacatggcaccttcattggatgctagacaagacatggtggtggtagaagtac |
1492187 |
T |
|
| Q |
119 |
ctagactaggaaaggaggctgcagtgaaagctataaaagaatggggtcaaccaaagtcaaagattactcacttaatcgtttgcaccacaagtggtgtaga |
218 |
Q |
| |
|
|||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
1492188 |
ctagactagggaaggaggctgcagtgaaggctataaaagaatggggtcaaccaaagtcaaagattactcacttaatcgtttgcaccacaagcggtgtaga |
1492287 |
T |
|
| Q |
219 |
catgcctggagccgattatcaactcacaaaactcttgggtcttcgcccatatgtgaaaaggtacatgatgtaccaacaagggtgttttgcaggtggcacg |
318 |
Q |
| |
|
||||||||| ||||||||||||||||| |||||||| |||||||| |||||||| ||||| |||||||||||||| ||||| |||||||||||||||||| |
|
|
| T |
1492288 |
catgcctggggccgattatcaactcactaaactcttaggtcttcgtccatatgtaaaaagatacatgatgtaccagcaaggttgttttgcaggtggcacg |
1492387 |
T |
|
| Q |
319 |
gtgcttcgtttggccaaagatttggctgagaacaacaaaggtgctcgtgtgttggttgtttgttctgaagtcaccgctgtcaca |
402 |
Q |
| |
|
|| ||||||||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || |||||| |
|
|
| T |
1492388 |
gtacttcgtttggctaaggatttggctgagaacaacaaaggtgctcgtgtgttagttgtttgttctgaagtcactgcagtcaca |
1492471 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 280; E-Value: 1e-157
Query Start/End: Original strand, 19 - 402
Target Start/End: Original strand, 1504897 - 1505280
Alignment:
| Q |
19 |
atgtatctaacagaagaaattttgaaagaaaatcctagtgtttgtgaatacatggccccttcattggatgctaggcaagacatggtggtggtagaggtac |
118 |
Q |
| |
|
||||| |||||||| || ||||| ||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1504897 |
atgtacctaacagaggagattttaaaagagaatcccagtgtttgtgaatacatggcaccttcattggatgctaggcaagacatggtggtggtagaggtac |
1504996 |
T |
|
| Q |
119 |
ctagactaggaaaggaggctgcagtgaaagctataaaagaatggggtcaaccaaagtcaaagattactcacttaatcgtttgcaccacaagtggtgtaga |
218 |
Q |
| |
|
|||||||||||||||||||||| || ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
1504997 |
ctagactaggaaaggaggctgccgtaaaagctataaaagaatggggtcagccaaagtcaaagattactcacttaattgtttgcaccacaagtggtgtaga |
1505096 |
T |
|
| Q |
219 |
catgcctggagccgattatcaactcacaaaactcttgggtcttcgcccatatgtgaaaaggtacatgatgtaccaacaagggtgttttgcaggtggcacg |
318 |
Q |
| |
|
|||||||||||| ||||| |||||||| |||||||| |||||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||| ||| |
|
|
| T |
1505097 |
catgcctggagctgattaccaactcaccaaactcttaggtcttcgcccatatgtgaagaggtacatgatgtaccagcaaggatgttttgcaggtgggacg |
1505196 |
T |
|
| Q |
319 |
gtgcttcgtttggccaaagatttggctgagaacaacaaaggtgctcgtgtgttggttgtttgttctgaagtcaccgctgtcaca |
402 |
Q |
| |
|
||||||||||||||||| || ||||||||||||||||||||||| |||||||||||||| ||||| |||||||| || |||||| |
|
|
| T |
1505197 |
gtgcttcgtttggccaaggacttggctgagaacaacaaaggtgcccgtgtgttggttgtctgttccgaagtcactgcagtcaca |
1505280 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 19 - 389
Target Start/End: Original strand, 1477919 - 1478289
Alignment:
| Q |
19 |
atgtatctaacagaagaaattttgaaagaaaatcctagtgtttgtgaatacatggccccttcattggatgctaggcaagacatggtggtggtagaggtac |
118 |
Q |
| |
|
|||||||| || ||||||||||||||||||||||| ||||| |||||||||||||| || ||||||||||||||||| ||||||||||||||||| |||| |
|
|
| T |
1477919 |
atgtatcttaccgaagaaattttgaaagaaaatccaagtgtatgtgaatacatggcaccgtcattggatgctaggcaggacatggtggtggtagaagtac |
1478018 |
T |
|
| Q |
119 |
ctagactaggaaaggaggctgcagtgaaagctataaaagaatggggtcaaccaaagtcaaagattactcacttaatcgtttgcaccacaagtggtgtaga |
218 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||| ||| |||||||||||||||||||||| |
|
|
| T |
1478019 |
ctagactaggaaaggaggctgcagtgaaagctataaaagaatggggccaaccaaaatcaaagattacacacttgatcttttgcaccacaagtggtgtaga |
1478118 |
T |
|
| Q |
219 |
catgcctggagccgattatcaactcacaaaactcttgggtcttcgcccatatgtgaaaaggtacatgatgtaccaacaagggtgttttgcaggtggcacg |
318 |
Q |
| |
|
||||||||| || ||||| |||||||| |||||||| |||||||| ||||||||||| ||||| ||||||||||||||||| |||||||||||||| ||| |
|
|
| T |
1478119 |
catgcctggcgctgattaccaactcaccaaactcttaggtcttcgtccatatgtgaagaggtatatgatgtaccaacaaggatgttttgcaggtgggacg |
1478218 |
T |
|
| Q |
319 |
gtgcttcgtttggccaaagatttggctgagaacaacaaaggtgctcgtgtgttggttgtttgttctgaagt |
389 |
Q |
| |
|
||||||||||||||||| || |||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
1478219 |
gtgcttcgtttggccaaggacttggctgagaacaataaaggtgctcgtgtgttggttgtttgttctgaagt |
1478289 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 19 - 389
Target Start/End: Original strand, 1482113 - 1482483
Alignment:
| Q |
19 |
atgtatctaacagaagaaattttgaaagaaaatcctagtgtttgtgaatacatggccccttcattggatgctaggcaagacatggtggtggtagaggtac |
118 |
Q |
| |
|
|||||||| || ||||| ||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
1482113 |
atgtatcttactgaagagattttgaaagaaaatcctagtgtatgcgaatacatggcaccttcattggatgctaggcaagacatggtggtggtagaggtgc |
1482212 |
T |
|
| Q |
119 |
ctagactaggaaaggaggctgcagtgaaagctataaaagaatggggtcaaccaaagtcaaagattactcacttaatcgtttgcaccacaagtggtgtaga |
218 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||| |||||||| |||| ||||||||||||||||| |
|
|
| T |
1482213 |
ctagactaggaaaggaggctgcagtgaaggctataaaagaatggggccaaccaaaatcaaagattacacacttaatattttgtaccacaagtggtgtaga |
1482312 |
T |
|
| Q |
219 |
catgcctggagccgattatcaactcacaaaactcttgggtcttcgcccatatgtgaaaaggtacatgatgtaccaacaagggtgttttgcaggtggcacg |
318 |
Q |
| |
|
||||||||| |||||||| ||||||||||||||||| |||||||| ||||||||||| || |||||||||||||||||||| || ||||||||||| ||| |
|
|
| T |
1482313 |
catgcctggtgccgattaccaactcacaaaactcttaggtcttcgtccatatgtgaagagatacatgatgtaccaacaaggatgctttgcaggtgggacg |
1482412 |
T |
|
| Q |
319 |
gtgcttcgtttggccaaagatttggctgagaacaacaaaggtgctcgtgtgttggttgtttgttctgaagt |
389 |
Q |
| |
|
||||||||||||||||| || ||||||||||| || ||||||||||||||||||||||||||||||||||| |
|
|
| T |
1482413 |
gtgcttcgtttggccaaggacttggctgagaataataaaggtgctcgtgtgttggttgtttgttctgaagt |
1482483 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 19 - 391
Target Start/End: Original strand, 1509044 - 1509416
Alignment:
| Q |
19 |
atgtatctaacagaagaaattttgaaagaaaatcctagtgtttgtgaatacatggccccttcattggatgctaggcaagacatggtggtggtagaggtac |
118 |
Q |
| |
|
|||||| | |||||||| ||||||||||| ||||| | |||||||| || | ||| || ||||||||||||||||||||||||||||| ||| |||||| |
|
|
| T |
1509044 |
atgtatattacagaagagattttgaaagagaatcccaatgtttgtgcttatacggcaccatcattggatgctaggcaagacatggtggttgtaaaggtac |
1509143 |
T |
|
| Q |
119 |
ctagactaggaaaggaggctgcagtgaaagctataaaagaatggggtcaaccaaagtcaaagattactcacttaatcgtttgcaccacaagtggtgtaga |
218 |
Q |
| |
|
|||| |||||||| |||| ||||||||| ||||||||||||||||| || ||||| ||||||||||| || |||||| ||||||||||||||||||| || |
|
|
| T |
1509144 |
ctaggctaggaaaagaggttgcagtgaaggctataaaagaatggggccagccaaaatcaaagattacacatttaatcttttgcaccacaagtggtgttga |
1509243 |
T |
|
| Q |
219 |
catgcctggagccgattatcaactcacaaaactcttgggtcttcgcccatatgtgaaaaggtacatgatgtaccaacaagggtgttttgcaggtggcacg |
318 |
Q |
| |
|
||| ||||||| |||||||||| || ||||| || ||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
1509244 |
tatgtctggagctcattatcaacttaccaaacttttaggtcttcacccatatgtaaaaaggtacatgatgtaccaacaaaggtgttttgcaggtggcact |
1509343 |
T |
|
| Q |
319 |
gtgcttcgtttggccaaagatttggctgagaacaacaaaggtgctcgtgtgttggttgtttgttctgaagtca |
391 |
Q |
| |
|
||||||| |||||| || ||||||||||| || ||| ||| ||||||||||||||||||||||||| |||||| |
|
|
| T |
1509344 |
gtgcttcatttggcaaaggatttggctgaaaataaccaagatgctcgtgtgttggttgtttgttctaaagtca |
1509416 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 76 - 392
Target Start/End: Original strand, 1499217 - 1499533
Alignment:
| Q |
76 |
ccttcattggatgctaggcaagacatggtggtggtagaggtacctagactaggaaaggaggctgcagtgaaagctataaaagaatggggtcaaccaaagt |
175 |
Q |
| |
|
||||| ||||||||||||||||||||| ||| ||||||| ||||||||||||| ||||||||||||||||| ||||| |||||||||||||||| |||| |
|
|
| T |
1499217 |
ccttctttggatgctaggcaagacatgatggcggtagagatacctagactagggaaggaggctgcagtgaaggctatcgaagaatggggtcaaccgaagt |
1499316 |
T |
|
| Q |
176 |
caaagattactcacttaatcgtttgcaccacaagtggtgtagacatgcctggagccgattatcaactcacaaaactcttgggtcttcgcccatatgtgaa |
275 |
Q |
| |
|
|||| ||||| || ||||| |||||||| |||||||||||||||||||| || ||||| ||||| ||||||||||| |||||| |||||||||||| |
|
|
| T |
1499317 |
caaatattacacatttaattttttgcacctatagtggtgtagacatgcctggtgcggattaccaactaacaaaactcttaggtcttaacccatatgtgaa |
1499416 |
T |
|
| Q |
276 |
aaggtacatgatgtaccaacaagggtgttttgcaggtggcacggtgcttcgtttggccaaagatttggctgagaacaacaaaggtgctcgtgtgttggtt |
375 |
Q |
| |
|
|||||||||||||||||||| |||||||| ||||||||| || || ||||||||||| || || || |||||||| |||||||||||||||||||||||| |
|
|
| T |
1499417 |
aaggtacatgatgtaccaactagggtgttatgcaggtggaacagtacttcgtttggcgaaggacttagctgagaataacaaaggtgctcgtgtgttggtt |
1499516 |
T |
|
| Q |
376 |
gtttgttctgaagtcac |
392 |
Q |
| |
|
|||||||||||| |||| |
|
|
| T |
1499517 |
gtttgttctgaaatcac |
1499533 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 27 - 392
Target Start/End: Original strand, 1486598 - 1486963
Alignment:
| Q |
27 |
aacagaagaaattttgaaagaaaatcctagtgtttgtgaatacatggccccttcattggatgctaggcaagacatggtggtggtagaggtacctagacta |
126 |
Q |
| |
|
|||||||| ||||||||||| ||||||| | |||| || ||| | ||||| ||||||||||||||||||||||||||| ||| || ||||| ||| |
|
|
| T |
1486598 |
aacagaagctattttgaaagagaatcctaatttttgcacttatatgacaccttctttggatgctaggcaagacatggtggtgcgagacgtgcctaggcta |
1486697 |
T |
|
| Q |
127 |
ggaaaggaggctgcagtgaaagctataaaagaatggggtcaaccaaagtcaaagattactcacttaatcgtttgcaccacaagtggtgtagacatgcctg |
226 |
Q |
| |
|
||||| |||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||||||| ||||||||| |||||| ||| |||||||| |
|
|
| T |
1486698 |
ggaaatgaggctgcagtgaaagctataaaagaatagggccaaccaaagtcaaagattacacacttaatattttgcaccatgagtggtataggcatgcctg |
1486797 |
T |
|
| Q |
227 |
gagccgattatcaactcacaaaactcttgggtcttcgcccatatgtgaaaaggtacatgatgtaccaacaagggtgttttgcaggtggcacggtgcttcg |
326 |
Q |
| |
|
| |||||||| ||||||||||||||||| |||||| |||| |||||||| |||| ||||| ||||||||||| || |||||||| ||||| || || || |
|
|
| T |
1486798 |
gtgccgattaccaactcacaaaactcttaggtctttgcccggatgtgaaacggtatatgatataccaacaaggatgctttgcagggggcactgttctacg |
1486897 |
T |
|
| Q |
327 |
tttggccaaagatttggctgagaacaacaaaggtgctcgtgtgttggttgtttgttctgaagtcac |
392 |
Q |
| |
|
|| |||||| || |||||||||||||| |||| ||||| ||||||||| | |||||||||||||| |
|
|
| T |
1486898 |
ttaggccaaggacttggctgagaacaataaagatgctcttgtgttggtaatatgttctgaagtcac |
1486963 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 70 - 395
Target Start/End: Complemental strand, 24163941 - 24163616
Alignment:
| Q |
70 |
atggccccttcattggatgctaggcaagacatggtggtggtagaggtacctagactaggaaaggaggctgcagtgaaagctataaaagaatggggtcaac |
169 |
Q |
| |
|
||||| ||||| |||||| ||||||||||||||||||| ||||||| ||| ||||||||||||||||| || ||||| ||||||||||||||||| |||| |
|
|
| T |
24163941 |
atggcaccttctttggatactaggcaagacatggtggtagtagaggcaccaagactaggaaaggaggcagccgtgaaggctataaaagaatggggccaac |
24163842 |
T |
|
| Q |
170 |
caaagtcaaagattactcacttaatcgtttgcaccacaagtggtgtagacatgcctggagccgattatcaactcacaaaactcttgggtcttcgcccata |
269 |
Q |
| |
|
||||||||||||| || |||||||| ||||||| | |||||||||||| |||||||| |||||||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
24163841 |
caaagtcaaagatcacacacttaatattttgcactataagtggtgtagatatgcctggtgccgattaccaactcacaaaactcttaggtcttcgcccatg |
24163742 |
T |
|
| Q |
270 |
tgtgaaaaggtacatgatgtaccaacaagggtgttttgcaggtggcacggtgcttcgtttggccaaagatttggctgagaacaacaaaggtgctcgtgtg |
369 |
Q |
| |
|
||| |||||||| |||||||||||||||||||||||||||||||||||||| ||||| |||||||| || ||||||||||||||||||||| |||||||| |
|
|
| T |
24163741 |
tgtaaaaaggtatatgatgtaccaacaagggtgttttgcaggtggcacggtacttcgcttggccaaggacttggctgagaacaacaaaggttctcgtgtg |
24163642 |
T |
|
| Q |
370 |
ttggttgtttgttctgaagtcaccgc |
395 |
Q |
| |
|
|||||||||||||||||||| ||||| |
|
|
| T |
24163641 |
ttggttgtttgttctgaagttaccgc |
24163616 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 160; Significance: 4e-85; HSPs: 3)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 28 - 383
Target Start/End: Complemental strand, 37859557 - 37859202
Alignment:
| Q |
28 |
acagaagaaattttgaaagaaaatcctagtgtttgtgaatacatggccccttcattggatgctaggcaagacatggtggtggtagaggtacctagactag |
127 |
Q |
| |
|
|||||||| || ||||||| ||||| ||||| || || |||||||| |||||||||||||| || |||||||||||||| || |||||||| ||||||| |
|
|
| T |
37859557 |
acagaagagatcctgaaagagaatccaagtgtatgcgagtacatggcaccttcattggatgcaagacaagacatggtggttgtggaggtaccaagactag |
37859458 |
T |
|
| Q |
128 |
gaaaggaggctgcagtgaaagctataaaagaatggggtcaaccaaagtcaaagattactcacttaatcgtttgcaccacaagtggtgtagacatgcctgg |
227 |
Q |
| |
|
|||| ||||| ||| || || || || |||||||||||||| ||||| |||||||| ||| | ||| |||||||||| ||||| || |||||||| || |
|
|
| T |
37859457 |
gaaaagaggcagcaacaaaggccatcaaggaatggggtcaacctaagtccaagattacccacctcatcttttgcaccaccagtggcgtggacatgcccgg |
37859358 |
T |
|
| Q |
228 |
agccgattatcaactcacaaaactcttgggtcttcgcccatatgtgaaaaggtacatgatgtaccaacaagggtgttttgcaggtggcacggtgcttcgt |
327 |
Q |
| |
|
||||| ||||| || ||||| |||||||| ||||| ||||||||||| | |||||||||||||||||||| |||||||| |||||||||||||||||| |
|
|
| T |
37859357 |
tgccgactatcagctgacaaagctcttgggccttcgtccatatgtgaagcgttacatgatgtaccaacaaggttgttttgctggtggcacggtgcttcgt |
37859258 |
T |
|
| Q |
328 |
ttggccaaagatttggctgagaacaacaaaggtgctcgtgtgttggttgtttgttc |
383 |
Q |
| |
|
||||| ||||| |||||||| |||||||||||||||||||||||||| |||||||| |
|
|
| T |
37859257 |
ttggctaaagacttggctgaaaacaacaaaggtgctcgtgtgttggtagtttgttc |
37859202 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 31 - 383
Target Start/End: Complemental strand, 37863580 - 37863228
Alignment:
| Q |
31 |
gaagaaattttgaaagaaaatcctagtgtttgtgaatacatggccccttcattggatgctaggcaagacatggtggtggtagaggtacctagactaggaa |
130 |
Q |
| |
|
||||| |||||||| || ||||||||| | ||||| || ||||| ||||| |||||||| || || || |||||||| || || ||||| | ||||||| |
|
|
| T |
37863580 |
gaagagattttgaaggagaatcctagtttatgtgagtatatggcaccttcgttggatgcaagacaggatatggtggttgtggaagtaccaaagctaggaa |
37863481 |
T |
|
| Q |
131 |
aggaggctgcagtgaaagctataaaagaatggggtcaaccaaagtcaaagattactcacttaatcgtttgcaccacaagtggtgtagacatgcctggagc |
230 |
Q |
| |
|
| ||||||||| || ||||| || |||||||||||||| ||||||||||||||||| |||| ||||||||||||||||||| || |||||||| || |
|
|
| T |
37863480 |
aagaggctgcaacaaaggctatcaaggaatggggtcaacctaagtcaaagattactcatctaattttttgcaccacaagtggtgtggatatgcctggtgc |
37863381 |
T |
|
| Q |
231 |
cgattatcaactcacaaaactcttgggtcttcgcccatatgtgaaaaggtacatgatgtaccaacaagggtgttttgcaggtggcacggtgcttcgtttg |
330 |
Q |
| |
|
|| ||||| |||||||| ||||||||||||||||| |||||||| | || |||||||| |||||||| |||||||| ||||| ||||||||||||||| |
|
|
| T |
37863380 |
tgactatcagctcacaaagctcttgggtcttcgcccgtatgtgaagcgttatatgatgtatcaacaaggttgttttgctggtgggacggtgcttcgtttg |
37863281 |
T |
|
| Q |
331 |
gccaaagatttggctgagaacaacaaaggtgctcgtgtgttggttgtttgttc |
383 |
Q |
| |
|
|| |||||||||||||| ||||||||||| |||||||| ||||| |||||||| |
|
|
| T |
37863280 |
gctaaagatttggctgaaaacaacaaaggcgctcgtgttttggtggtttgttc |
37863228 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 28 - 372
Target Start/End: Original strand, 39030000 - 39030344
Alignment:
| Q |
28 |
acagaagaaattttgaaagaaaatcctagtgtttgtgaatacatggccccttcattggatgctaggcaagacatggtggtggtagaggtacctagactag |
127 |
Q |
| |
|
|||||| |||| ||||| || ||||| ||| ||||||| | ||||| ||||| |||||||| || || ||||| ||||| | || ||||| | || | |
|
|
| T |
39030000 |
acagaacaaatattgaaggagaatccaagtttttgtgagtttatggcaccttctttggatgcaagacaggacattgtggttgaggaagtaccaaagctcg |
39030099 |
T |
|
| Q |
128 |
gaaaggaggctgcagtgaaagctataaaagaatggggtcaaccaaagtcaaagattactcacttaatcgtttgcaccacaagtggtgtagacatgcctgg |
227 |
Q |
| |
|
|||| || || ||| | || ||||| || |||||||||||||| ||||||| | ||||||| | || ||||||| |||||||||| || |||||||| |
|
|
| T |
39030100 |
gaaaagaagcagcaataaaggctatcaatgaatggggtcaacctaagtcaatggttactcatctcatattttgcacttcaagtggtgtcgatatgcctgg |
39030199 |
T |
|
| Q |
228 |
agccgattatcaactcacaaaactcttgggtcttcgcccatatgtgaaaaggtacatgatgtaccaacaagggtgttttgcaggtggcacggtgcttcgt |
327 |
Q |
| |
|
||| || ||||| |||||||| ||||| || ||| | |||||||| || | || ||||||||||||||||| |||||||| |||| | || ||||| |
|
|
| T |
39030200 |
agctgactatcagctcacaaagctcttaggcctttgtccatatgtaaagcgttatatgatgtaccaacaaggttgttttgctggtgcgatggctcttcgc |
39030299 |
T |
|
| Q |
328 |
ttggccaaagatttggctgagaacaacaaaggtgctcgtgtgttg |
372 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
39030300 |
ttggctaaagatttggctgagaacaacaaaggtgcccgtgtgttg |
39030344 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 103; Significance: 4e-51; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 26 - 368
Target Start/End: Original strand, 35250738 - 35251080
Alignment:
| Q |
26 |
taacagaagaaattttgaaagaaaatcctagtgtttgtgaatacatggccccttcattggatgctaggcaagacatggtggtggtagaggtacctagact |
125 |
Q |
| |
|
||||||| |||||| ||||||||||||| | | | |||| |||||||| || ||||||||||| || ||||| |||||||| |||||||| || || | |
|
|
| T |
35250738 |
taacagaggaaattctgaaagaaaatcccaatatgtgtgcttacatggcaccatcattggatgcaagacaagatatggtggtagtagaggtgccaaggtt |
35250837 |
T |
|
| Q |
126 |
aggaaaggaggctgcagtgaaagctataaaagaatggggtcaaccaaagtcaaagattactcacttaatcgtttgcaccacaagtggtgtagacatgcct |
225 |
Q |
| |
|
|||||| || || ||| ||||| || || |||||||||||||||||||| ||||| |||||| | || |||||| || |||||||| || |||||| |
|
|
| T |
35250838 |
aggaaaagaagcagcaacaaaagcgatcaaggaatggggtcaaccaaagtccaagatcactcacctcatattttgcattactagtggtgtggatatgcct |
35250937 |
T |
|
| Q |
226 |
ggagccgattatcaactcacaaaactcttgggtcttcgcccatatgtgaaaaggtacatgatgtaccaacaagggtgttttgcaggtggcacggtgcttc |
325 |
Q |
| |
|
|| || |||||||| ||||||||| | | || ||||| || | |||||| | || ||||||||||||||||||||||| || ||||| | ||| |||| |
|
|
| T |
35250938 |
ggtgctgattatcagctcacaaaattgctaggacttcgtccgtcggtgaaacgttatatgatgtaccaacaagggtgtttcgctggtggtatggttcttc |
35251037 |
T |
|
| Q |
326 |
gtttggccaaagatttggctgagaacaacaaaggtgctcgtgt |
368 |
Q |
| |
|
||||||| |||||||||||||||||||| |||||||||||||| |
|
|
| T |
35251038 |
gtttggctaaagatttggctgagaacaataaaggtgctcgtgt |
35251080 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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