View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14912_low_2 (Length: 632)
Name: NF14912_low_2
Description: NF14912
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14912_low_2 |
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Alignment Details
Target: chr7 (Bit Score: 583; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 583; E-Value: 0
Query Start/End: Original strand, 1 - 617
Target Start/End: Complemental strand, 33751687 - 33751069
Alignment:
| Q |
1 |
aacacaattacaatattaacaaacacaacaaattctcacataacaggacataagtataacttattggcatctcaaattttgcaagcataatatgcaccta |
100 |
Q |
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| T |
33751687 |
aacacaattacaatattaacaaacacaacaaattctcacataacaggacataagtataacttattggcatctcaaattttgcaagcataatatgcaccta |
33751588 |
T |
|
| Q |
101 |
tttcactagtcctgatcttttacttctattggataacaatatctgcctcaacttctgcttatctcagataattgtcaaagtattgaactcaattcatata |
200 |
Q |
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| T |
33751587 |
tttcactagtcctgatcttttacttctattggataacaatatctgcctcaacttctgcttatctcagataattgtcaaagtattgaactcaattcatata |
33751488 |
T |
|
| Q |
201 |
cttgatttgatatacagtaggactgaaaaaacatcagagattatgtatataatgccaagagaaatcatcataaaaaacacctagaaattagagtgtacaa |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33751487 |
cttgatttgatatacagtaggactgaaaaaacatcagagattatgtatataatgccaagagaaatcatcataaaaaacacctagaaattagagtgtacaa |
33751388 |
T |
|
| Q |
301 |
atgactctaacaaaacgaagaggatcatgaccaaatcctatggttcacatcaatccaagaattacaaaaatcaatttgatgaaatcagtctaaattaagn |
400 |
Q |
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||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33751387 |
atgactctaacaaaacgaagaggatcatgaccaaatcctttggttcacatcaatccaagaattacaaaaatcaatttgatgaaatcagtctaaattaagt |
33751288 |
T |
|
| Q |
401 |
nnnnnnatctttagatataacatccatcttccaccacaataaaacataaaagagagatgctacaattaaaaaatgaaacaaattcatcaatcatcaatca |
500 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33751287 |
ttttttatctttagatataacatccatcttccaccacaataaaacataaaagagagatgctacaattaaaaaatgaaacaaattcatcaatcatcaatca |
33751188 |
T |
|
| Q |
501 |
ttggtatagctagcttcacctaaataccgcctttgtttacattattttggtcttaaccctctactctctcgtaatcttgagtttagctacgaagtaagta |
600 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33751187 |
ttggtatagctagcttcacctaaataccgcctttgtttacattattttggtcttaaccctctactctctcgtaatcttgagtttagctacgaagtaagta |
33751088 |
T |
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| Q |
601 |
aag--tgactaaagattgt |
617 |
Q |
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||| |||||||||||||| |
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| T |
33751087 |
aagtctgactaaagattgt |
33751069 |
T |
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