View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14912_low_32 (Length: 265)

Name: NF14912_low_32
Description: NF14912
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14912_low_32
NF14912_low_32
[»] chr4 (43 HSPs)
chr4 (12-265)||(20632665-20632916)
chr4 (66-240)||(55319452-55319624)
chr4 (150-253)||(31950629-31950734)
chr4 (12-66)||(15638161-15638215)
chr4 (12-69)||(40721981-40722038)
chr4 (14-66)||(32901329-32901381)
chr4 (12-66)||(1562553-1562607)
chr4 (12-66)||(3475869-3475923)
chr4 (12-66)||(36444412-36444466)
chr4 (12-66)||(36812420-36812474)
chr4 (12-66)||(40629357-40629411)
chr4 (12-66)||(43358613-43358667)
chr4 (12-66)||(51107458-51107512)
chr4 (15-77)||(54251470-54251532)
chr4 (14-66)||(29863551-29863603)
chr4 (22-66)||(35824133-35824177)
chr4 (16-66)||(2004209-2004260)
chr4 (12-71)||(5208344-5208403)
chr4 (15-66)||(26442410-26442461)
chr4 (13-76)||(44170637-44170700)
chr4 (12-63)||(47519737-47519788)
chr4 (12-71)||(55595944-55596003)
chr4 (12-66)||(6093624-6093678)
chr4 (12-66)||(9472530-9472584)
chr4 (12-66)||(12241058-12241112)
chr4 (12-66)||(24088581-24088635)
chr4 (12-66)||(31240648-31240702)
chr4 (12-62)||(33484125-33484175)
chr4 (12-66)||(33820353-33820407)
chr4 (12-66)||(34259815-34259869)
chr4 (12-66)||(39881047-39881101)
chr4 (12-66)||(44272827-44272881)
chr4 (28-66)||(44451719-44451757)
chr4 (12-66)||(47998594-47998648)
chr4 (12-66)||(49424837-49424891)
chr4 (12-66)||(52669626-52669680)
chr4 (12-66)||(53384344-53384398)
chr4 (12-66)||(53662445-53662499)
chr4 (12-66)||(55960700-55960754)
chr4 (14-66)||(23094376-23094428)
chr4 (39-75)||(24310554-24310590)
chr4 (14-66)||(25725713-25725765)
chr4 (14-66)||(42853939-42853991)
[»] chr5 (37 HSPs)
chr5 (86-213)||(2779346-2779471)
chr5 (12-66)||(1293102-1293157)
chr5 (12-66)||(7144577-7144631)
chr5 (12-66)||(20985546-20985600)
chr5 (12-66)||(31708370-31708424)
chr5 (12-65)||(4292783-4292836)
chr5 (14-66)||(3031834-3031886)
chr5 (14-66)||(14914372-14914424)
chr5 (12-66)||(6940166-6940221)
chr5 (12-66)||(18695318-18695373)
chr5 (12-66)||(22098255-22098310)
chr5 (27-66)||(40829414-40829453)
chr5 (12-62)||(3154660-3154710)
chr5 (12-66)||(9594478-9594532)
chr5 (12-66)||(9599745-9599799)
chr5 (12-66)||(11881004-11881058)
chr5 (12-66)||(12891113-12891167)
chr5 (12-66)||(19271859-19271913)
chr5 (12-66)||(22920509-22920563)
chr5 (12-66)||(25585473-25585527)
chr5 (12-66)||(29765830-29765884)
chr5 (12-66)||(29803225-29803279)
chr5 (12-66)||(30574394-30574448)
chr5 (16-66)||(35814453-35814503)
chr5 (12-66)||(39032621-39032675)
chr5 (12-66)||(39788723-39788777)
chr5 (19-64)||(285229-285274)
chr5 (13-66)||(2050927-2050980)
chr5 (12-64)||(14321971-14322024)
chr5 (14-66)||(16690499-16690552)
chr5 (13-66)||(36416080-36416133)
chr5 (27-67)||(2629817-2629857)
chr5 (14-66)||(18729308-18729360)
chr5 (14-66)||(26627330-26627382)
chr5 (14-66)||(32424951-32425003)
chr5 (14-66)||(32873168-32873220)
chr5 (14-66)||(33393634-33393686)
[»] chr2 (43 HSPs)
chr2 (68-148)||(31958615-31958693)
chr2 (179-253)||(31959210-31959284)
chr2 (12-66)||(29168725-29168779)
chr2 (14-66)||(19637229-19637281)
chr2 (14-66)||(19835822-19835874)
chr2 (14-66)||(27529529-27529581)
chr2 (12-68)||(31635827-31635883)
chr2 (12-66)||(5031923-5031978)
chr2 (27-66)||(24766152-24766191)
chr2 (12-66)||(1052513-1052567)
chr2 (12-66)||(4723566-4723620)
chr2 (12-66)||(5954500-5954554)
chr2 (12-66)||(8352835-8352889)
chr2 (12-66)||(30339993-30340047)
chr2 (12-66)||(39737703-39737757)
chr2 (12-66)||(42141611-42141665)
chr2 (12-66)||(44484673-44484727)
chr2 (13-66)||(36909861-36909914)
chr2 (12-66)||(6336252-6336307)
chr2 (12-66)||(11126463-11126518)
chr2 (12-66)||(12784415-12784470)
chr2 (12-66)||(18737890-18737945)
chr2 (27-66)||(35334520-35334559)
chr2 (27-66)||(40874293-40874332)
chr2 (12-66)||(3959894-3959948)
chr2 (12-66)||(4114438-4114492)
chr2 (12-66)||(5852474-5852528)
chr2 (12-66)||(6328667-6328721)
chr2 (12-66)||(6639489-6639543)
chr2 (12-66)||(7498008-7498062)
chr2 (12-66)||(12256901-12256955)
chr2 (12-66)||(13711061-13711115)
chr2 (12-66)||(14797667-14797721)
chr2 (12-66)||(18749380-18749434)
chr2 (12-66)||(29893610-29893664)
chr2 (28-66)||(34913092-34913130)
chr2 (12-69)||(3196104-3196161)
chr2 (12-65)||(9384376-9384429)
chr2 (12-65)||(34373006-34373059)
chr2 (15-68)||(39247483-39247536)
chr2 (18-66)||(11980651-11980699)
chr2 (14-66)||(12208442-12208494)
chr2 (14-66)||(33559639-33559691)
[»] chr1 (44 HSPs)
chr1 (12-66)||(26501295-26501349)
chr1 (12-66)||(12999839-12999893)
chr1 (12-66)||(27352630-27352684)
chr1 (12-66)||(3919300-3919354)
chr1 (12-66)||(8577519-8577573)
chr1 (12-66)||(18541068-18541122)
chr1 (12-66)||(25989001-25989055)
chr1 (12-66)||(29489376-29489430)
chr1 (12-66)||(43457836-43457890)
chr1 (12-66)||(49621363-49621417)
chr1 (12-73)||(35972821-35972882)
chr1 (14-66)||(12708090-12708142)
chr1 (14-66)||(12713544-12713596)
chr1 (14-66)||(12717635-12717687)
chr1 (13-65)||(26839383-26839435)
chr1 (12-68)||(40605438-40605494)
chr1 (12-68)||(43056714-43056770)
chr1 (12-66)||(4213072-4213127)
chr1 (12-66)||(21433417-21433472)
chr1 (12-66)||(47642623-47642678)
chr1 (27-66)||(49020436-49020475)
chr1 (12-66)||(49931553-49931608)
chr1 (12-66)||(5959388-5959442)
chr1 (27-65)||(9897594-9897632)
chr1 (12-66)||(11097901-11097955)
chr1 (12-66)||(23554751-23554805)
chr1 (12-66)||(26585190-26585244)
chr1 (12-66)||(27810264-27810318)
chr1 (12-66)||(32216002-32216056)
chr1 (12-66)||(40612114-40612168)
chr1 (12-66)||(42256460-42256514)
chr1 (12-66)||(42843361-42843415)
chr1 (12-66)||(44672047-44672101)
chr1 (12-66)||(51193148-51193202)
chr1 (28-69)||(33076116-33076157)
chr1 (29-66)||(47059913-47059950)
chr1 (12-67)||(649767-649823)
chr1 (14-66)||(1100217-1100269)
chr1 (14-66)||(3606113-3606165)
chr1 (14-66)||(9445108-9445160)
chr1 (18-66)||(42615860-42615908)
chr1 (12-76)||(49596225-49596289)
chr1 (12-63)||(51231322-51231374)
chr1 (12-67)||(52437493-52437549)
[»] chr7 (28 HSPs)
chr7 (14-66)||(25614840-25614892)
chr7 (12-67)||(3341698-3341753)
chr7 (12-66)||(28081799-28081853)
chr7 (16-66)||(29763830-29763880)
chr7 (12-66)||(33050183-33050237)
chr7 (14-66)||(11070228-11070280)
chr7 (12-63)||(37385250-37385301)
chr7 (15-66)||(42467204-42467255)
chr7 (12-63)||(45335865-45335916)
chr7 (12-66)||(2347076-2347130)
chr7 (12-66)||(4971290-4971344)
chr7 (12-66)||(5378627-5378681)
chr7 (12-66)||(9055267-9055321)
chr7 (12-66)||(19426580-19426634)
chr7 (12-66)||(30864434-30864488)
chr7 (12-66)||(37392043-37392097)
chr7 (14-63)||(38259066-38259116)
chr7 (12-66)||(40693545-40693599)
chr7 (12-66)||(42060656-42060710)
chr7 (28-66)||(42671013-42671051)
chr7 (12-66)||(43079649-43079703)
chr7 (12-66)||(44175545-44175599)
chr7 (12-66)||(48639400-48639454)
chr7 (12-65)||(17039158-17039211)
chr7 (14-66)||(16567316-16567368)
chr7 (14-66)||(16598294-16598346)
chr7 (14-66)||(24700121-24700173)
chr7 (14-66)||(44511139-44511191)
[»] chr3 (49 HSPs)
chr3 (14-66)||(52100261-52100313)
chr3 (14-66)||(54233487-54233539)
chr3 (12-66)||(11327108-11327162)
chr3 (12-66)||(11335319-11335373)
chr3 (12-66)||(16267914-16267968)
chr3 (12-66)||(27162486-27162540)
chr3 (12-66)||(36869854-36869908)
chr3 (12-66)||(48944727-48944781)
chr3 (12-66)||(49761203-49761257)
chr3 (12-66)||(53133969-53134023)
chr3 (12-73)||(40159855-40159916)
chr3 (12-68)||(37754445-37754501)
chr3 (27-67)||(49021710-49021750)
chr3 (13-68)||(14839063-14839118)
chr3 (12-66)||(19150335-19150390)
chr3 (12-66)||(26550237-26550292)
chr3 (12-66)||(27168698-27168753)
chr3 (12-66)||(29573372-29573427)
chr3 (12-66)||(37894259-37894314)
chr3 (12-63)||(41369600-41369651)
chr3 (12-66)||(48352996-48353051)
chr3 (27-66)||(51137068-51137107)
chr3 (27-66)||(52963348-52963387)
chr3 (12-66)||(7231-7285)
chr3 (12-66)||(462418-462472)
chr3 (12-66)||(1295332-1295386)
chr3 (12-66)||(2280177-2280231)
chr3 (12-66)||(2482691-2482745)
chr3 (12-66)||(7351655-7351709)
chr3 (12-66)||(8254027-8254081)
chr3 (12-66)||(27936964-27937018)
chr3 (12-66)||(30664503-30664557)
chr3 (12-66)||(32931935-32931989)
chr3 (12-66)||(36818956-36819010)
chr3 (12-66)||(39604263-39604317)
chr3 (12-66)||(42643235-42643289)
chr3 (16-66)||(45517678-45517728)
chr3 (12-66)||(47141617-47141671)
chr3 (12-66)||(50025715-50025769)
chr3 (12-66)||(51032641-51032695)
chr3 (29-66)||(46952949-46952986)
chr3 (12-69)||(48205042-48205099)
chr3 (12-67)||(3347138-3347194)
chr3 (12-68)||(8066353-8066409)
chr3 (14-66)||(47849672-47849724)
chr3 (12-64)||(47988502-47988554)
chr3 (12-64)||(47997789-47997841)
chr3 (12-64)||(48007076-48007128)
chr3 (14-66)||(50280106-50280158)
[»] chr8 (53 HSPs)
chr8 (12-66)||(1158352-1158406)
chr8 (12-66)||(14548840-14548894)
chr8 (12-66)||(35937529-35937583)
chr8 (12-69)||(12659049-12659106)
chr8 (12-66)||(7376506-7376560)
chr8 (12-66)||(27300346-27300400)
chr8 (12-66)||(32674249-32674303)
chr8 (14-66)||(23754725-23754778)
chr8 (14-63)||(41703322-41703371)
chr8 (14-66)||(10591892-10591944)
chr8 (14-66)||(14531621-14531673)
chr8 (14-66)||(21649187-21649239)
chr8 (14-66)||(37873124-37873176)
chr8 (12-66)||(67177-67232)
chr8 (12-63)||(6105453-6105504)
chr8 (12-63)||(6656362-6656413)
chr8 (12-63)||(6736764-6736815)
chr8 (12-66)||(10644818-10644873)
chr8 (27-66)||(12655922-12655961)
chr8 (12-63)||(14228710-14228761)
chr8 (12-66)||(25830262-25830317)
chr8 (12-66)||(35067160-35067215)
chr8 (12-66)||(35792069-35792124)
chr8 (12-66)||(43285979-43286034)
chr8 (12-66)||(3650113-3650167)
chr8 (12-66)||(7814609-7814663)
chr8 (12-66)||(9048333-9048387)
chr8 (12-66)||(10344324-10344378)
chr8 (12-66)||(11114686-11114740)
chr8 (12-66)||(18549979-18550033)
chr8 (16-66)||(23708976-23709026)
chr8 (12-66)||(28713093-28713147)
chr8 (12-66)||(28720440-28720494)
chr8 (12-66)||(28728082-28728136)
chr8 (12-66)||(30943856-30943910)
chr8 (12-66)||(31806299-31806353)
chr8 (12-66)||(34641545-34641599)
chr8 (12-66)||(35701844-35701898)
chr8 (12-66)||(37784391-37784445)
chr8 (12-66)||(40102023-40102077)
chr8 (28-66)||(41955929-41955967)
chr8 (12-66)||(42716320-42716374)
chr8 (12-65)||(44061718-44061772)
chr8 (12-69)||(16699585-16699642)
chr8 (13-66)||(30129415-30129468)
chr8 (13-65)||(1268793-1268845)
chr8 (12-63)||(3547176-3547228)
chr8 (14-66)||(20473779-20473831)
chr8 (16-68)||(20852917-20852969)
chr8 (27-67)||(21526313-21526353)
chr8 (14-66)||(28623130-28623182)
chr8 (29-65)||(32020488-32020524)
chr8 (14-66)||(39021462-39021514)
[»] chr6 (17 HSPs)
chr6 (12-66)||(16743283-16743337)
chr6 (12-66)||(28883765-28883819)
chr6 (13-66)||(8778890-8778943)
chr6 (12-66)||(3339516-3339570)
chr6 (12-66)||(9188961-9189015)
chr6 (12-63)||(34570611-34570663)
chr6 (12-63)||(3049547-3049598)
chr6 (12-66)||(16337939-16337994)
chr6 (12-63)||(21506339-21506390)
chr6 (12-66)||(17835612-17835666)
chr6 (12-66)||(19789093-19789147)
chr6 (28-66)||(26391318-26391356)
chr6 (12-66)||(28965857-28965911)
chr6 (12-66)||(32729889-32729943)
chr6 (27-63)||(3552186-3552222)
chr6 (12-76)||(23633340-23633404)
chr6 (11-66)||(25127848-25127904)
[»] scaffold0011 (1 HSPs)
scaffold0011 (12-66)||(18595-18649)
[»] scaffold0049 (1 HSPs)
scaffold0049 (13-66)||(72187-72240)
[»] scaffold0687 (1 HSPs)
scaffold0687 (12-66)||(7060-7114)
[»] scaffold0514 (1 HSPs)
scaffold0514 (12-66)||(1862-1916)
[»] scaffold0154 (1 HSPs)
scaffold0154 (16-66)||(4315-4365)
[»] scaffold0085 (1 HSPs)
scaffold0085 (13-63)||(31316-31366)
[»] scaffold0020 (1 HSPs)
scaffold0020 (12-66)||(155906-155960)
[»] scaffold0019 (1 HSPs)
scaffold0019 (12-66)||(72366-72420)
[»] scaffold0014 (1 HSPs)
scaffold0014 (12-66)||(145061-145115)
[»] scaffold0003 (2 HSPs)
scaffold0003 (12-66)||(337118-337172)
scaffold0003 (12-67)||(366293-366348)
[»] scaffold0178 (1 HSPs)
scaffold0178 (14-66)||(9776-9829)


Alignment Details
Target: chr4 (Bit Score: 211; Significance: 1e-116; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 12 - 265
Target Start/End: Original strand, 20632665 - 20632916
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctccttgcaaaataatctctttaatgttggtcagcttcagcagaaggg 111  Q
    |||||||||||| |||||||||||| ||||||||||| || ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  20632665 agagagaaagttatgcaaaagttatcaaaaaatggttgtataaatatcatttctccttacaaaataatctctttaatgttggtcagcttcagcagaaggg 20632764  T
Q  112 tctgattgttgtgtgattcggcaacatatgtgtaagggacgatatgaggattactggtgctcaaggattcccctgttatttgcaccggttgtgtggttgg 211  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  20632765 tctgatt--tgtgtgattcggcaacatatgtgtaagggacgatatgaggattactggtgctcaaggattcccctgttatttgcactggttgtgtggttgg 20632862  T
Q  212 aaagcggcacagagaagctattccaaagattagttcttggagctatcaagcaat 265  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  20632863 aaagcggcacagggaagctattccaaagatgagttcttggagctatcaagcaat 20632916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 66 - 240
Target Start/End: Complemental strand, 55319624 - 55319452
Alignment:
Q  66 ccttgcaaaataatctctttaatgttggtcagcttcagcagaagggtctgattgttgtgtgattcggcaacatatgtgtaa--gggacgatatgaggatt 163  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||| |||||||||  |||||||||||||||||    
T  55319624 ccttgcaaaataatctctttaatgttggtcagcttcagcagaagggtctgattgt--tgtgattcagcaacgtatgtgtaagggggacgatatgaggatt 55319527  T
Q  164 actggtgctcaaggattcccctgttatttgcaccggttgtgtggttggaaagcggcacagagaagctattccaaaga 240  Q
    || |||||||||||||||||  ||||||||||| |||||||||||||||||||||||||| ||||||||| ||||||    
T  55319526 accggtgctcaaggattccc--gttatttgcactggttgtgtggttggaaagcggcacagggaagctattgcaaaga 55319452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 150 - 253
Target Start/End: Complemental strand, 31950734 - 31950629
Alignment:
Q  150 acgatatgaggattactggtgctcaaggattcccctgttatttgcaccggttgtgtggttggaaagcggcacagagaagctatt--ccaaagattagttc 247  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||  |||||||| |||||    
T  31950734 acgatatgaggattaccggtgctcaaggattcccctgttatttgcactggttgtgtggttggaaagcggcacagggaagctattccccaaagatgagttc 31950635  T
Q  248 ttggag 253  Q
    ||||||    
T  31950634 ttggag 31950629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 15638215 - 15638161
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||||||||||||||||| | |||||||| || |||||||||||||||||    
T  15638215 agagagaaagttgtgcaaaagttgtcaaaaaatgattgtacaaatatcatttctc 15638161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 40721981 - 40722038
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctcctt 69  Q
    |||||||||||||| ||||| |||||| ||||||| | ||||||||||||||||||||    
T  40721981 agagagaaagttgtccaaaaattattataaaatggatgtacaaatatcatttctcctt 40722038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 32901381 - 32901329
Alignment:
Q  14 agagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||||||||||||| |||| ||||||| ||| |||||||||||||||||    
T  32901381 agagaaagttgtgcaaaaattatcaaaaaatagttgtacaaatatcatttctc 32901329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 1562553 - 1562607
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||||||||  ||||||| ||| ||||||||| |||||||||||||||||    
T  1562553 agagagaaagttgtcaaaaagttgttagaaaatggttgtacaaatatcatttctc 1562607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 3475923 - 3475869
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||||||||| |||||||| | | ||||||||| |||||||||||||||||    
T  3475923 agagagaaagttgtacaaaagttgtcataaaatggttgtacaaatatcatttctc 3475869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 36444412 - 36444466
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||||||||  ||||||||| | ||||||||| |||||||||||||||||    
T  36444412 agagagaaagttgttaaaaagttatcataaaatggttgtacaaatatcatttctc 36444466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 36812420 - 36812474
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||||||||| |||||||| ||| ||| ||||| |||||||||||||||||    
T  36812420 agagagaaagttgtccaaaagttgttagaaattggttgtacaaatatcatttctc 36812474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 40629357 - 40629411
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||||||||| |||| ||||||| ||||| ||| |||||||||||||||||    
T  40629357 agagagaaagttgtccaaaggttattacaaaatagttgtacaaatatcatttctc 40629411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 43358667 - 43358613
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||||||||| |||||||| ||| ||| ||||| |||||||||||||||||    
T  43358667 agagagaaagttgtccaaaagttgttagaaattggttgtacaaatatcatttctc 43358613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 51107458 - 51107512
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||||||||||||||| ||||  ||||||| || |||||||||||||||||    
T  51107458 agagagaaagttgtgcaaaaattatacaaaaatgattgtacaaatatcatttctc 51107512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 15 - 77
Target Start/End: Original strand, 54251470 - 54251532
Alignment:
Q  15 gagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctccttgcaaaata 77  Q
    |||||||||||  |||| |||||||||||| ||| ||||||||||||||||| || |||||||    
T  54251470 gagaaagttgtcgaaaaattattaaaaaatagttgtacaaatatcatttctcatttcaaaata 54251532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 29863603 - 29863551
Alignment:
Q  14 agagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||||||| ||||||||||   ||||||||| |||||||||||||||||    
T  29863603 agagaaagttgtacaaaagttataccaaaatggttgtacaaatatcatttctc 29863551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 35824133 - 35824177
Alignment:
Q  22 ttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||| |||||||| ||||||||||||| |||||||||||||||||    
T  35824133 ttgtccaaaagttgttaaaaaatggttgtacaaatatcatttctc 35824177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 66
Target Start/End: Original strand, 2004209 - 2004260
Alignment:
Q  16 agaaagttgt-gcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||||| ||||||||| ||||||||||||| | |||||||||||||||    
T  2004209 agaaagttgttgcaaaagttgttaaaaaatggttgttcaaatatcatttctc 2004260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 5208344 - 5208403
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctccttgc 71  Q
    |||||||||||||| |||||||| | | ||| ||||| ||||||||||||||||| ||||    
T  5208344 agagagaaagttgtacaaaagttgtcacaaattggttgtacaaatatcatttctctttgc 5208403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 15 - 66
Target Start/End: Original strand, 26442410 - 26442461
Alignment:
Q  15 gagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||||||||||||||| |   ||||||||| |||||||||||||||||    
T  26442410 gagaaagttgtgcaaaagttgtaccaaaatggttgtacaaatatcatttctc 26442461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 44170637 - 44170700
Alignment:
Q  13 gagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctccttgcaaaat 76  Q
    |||||||||||||  |||| |||| | ||||||||| ||||||||||||||||| ||| |||||    
T  44170637 gagagaaagttgtcaaaaaattataacaaaatggttgtacaaatatcatttctctttgtaaaat 44170700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 63
Target Start/End: Original strand, 47519737 - 47519788
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcattt 63  Q
    |||||||||||||| |||||||| ||| ||||||| | ||||||||||||||    
T  47519737 agagagaaagttgttcaaaagttgttacaaaatggatgtacaaatatcattt 47519788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 55596003 - 55595944
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctccttgc 71  Q
    ||||||||||||||  ||||||| ||| ||| ||||| ||||||||||||||||| ||||    
T  55596003 agagagaaagttgtcaaaaagttgttagaaattggttgtacaaatatcatttctctttgc 55595944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 6093624 - 6093678
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||||||||| ||||| || |   |||||||||||||||||||||||||||    
T  6093624 agagagaaagttgtacaaaaattgtattaaaatggttctacaaatatcatttctc 6093678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 9472530 - 9472584
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||||||||  |||| |||||| ||||| ||| |||||||||||||||||    
T  9472530 agagagaaagttgtcaaaaaattattagaaaatagttgtacaaatatcatttctc 9472584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 12241112 - 12241058
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||||||||  ||||||| ||| ||||| ||| |||||||||||||||||    
T  12241112 agagagaaagttgtcaaaaagttgttagaaaatagttgtacaaatatcatttctc 12241058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 24088581 - 24088635
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||| |||||| |||||||| | | ||||||||| |||||||||||||||||    
T  24088581 agagagagagttgttcaaaagttgtcataaaatggttgtacaaatatcatttctc 24088635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 31240702 - 31240648
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||||||||  ||||||||| | ||| ||||| |||||||||||||||||    
T  31240702 agagagaaagttgtaaaaaagttatcacaaagtggttgtacaaatatcatttctc 31240648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 62
Target Start/End: Original strand, 33484125 - 33484175
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatt 62  Q
    |||||||||||||| ||||| |||| | ||||||||| |||||||||||||    
T  33484125 agagagaaagttgtccaaaaattatcacaaaatggttgtacaaatatcatt 33484175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 33820353 - 33820407
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||||||||  ||||||| ||| ||||| ||| |||||||||||||||||    
T  33820353 agagagaaagttgtcaaaaagttgttagaaaatagttgtacaaatatcatttctc 33820407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 34259869 - 34259815
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||||||||| ||| |||| | | ||||||||| |||||||||||||||||    
T  34259869 agagagaaagttgttcaacagttgtcacaaaatggttgtacaaatatcatttctc 34259815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 39881047 - 39881101
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||||||||  ||||||| ||| |||||| || |||||||||||||||||    
T  39881047 agagagaaagttgtcaaaaagttgttagaaaatgattgtacaaatatcatttctc 39881101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 44272827 - 44272881
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||||||||  ||||||| | ||||||| ||| |||||||||||||||||    
T  44272827 agagagaaagttgtttaaaagttgtcaaaaaatagttgtacaaatatcatttctc 44272881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 66
Target Start/End: Complemental strand, 44451757 - 44451719
Alignment:
Q  28 aaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||| |||||||||||| |||||||||||||||||||||    
T  44451757 aaaaattattaaaaaatagttctacaaatatcatttctc 44451719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 47998648 - 47998594
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||| ||||||||  ||||||| ||| ||||||||| |||||||||||||||||    
T  47998648 agagaaaaagttgtcaaaaagttgttacaaaatggttgtacaaatatcatttctc 47998594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 49424837 - 49424891
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||||||||  ||||||| ||| |||| |||| |||||||||||||||||    
T  49424837 agagagaaagttgtcaaaaagttgttacaaaaaggttgtacaaatatcatttctc 49424891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 52669626 - 52669680
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||||||||| |||||||||| | ||| || || |||||||||||||||||    
T  52669626 agagagaaagttgtacaaaagttatcacaaattgtttgtacaaatatcatttctc 52669680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 53384344 - 53384398
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||| |||| |||||||||||| ||| || || |||||||||||||||||    
T  53384344 agagagaaaattgtacaaaagttattacaaattgattgtacaaatatcatttctc 53384398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 53662445 - 53662499
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||||||||| ||||| || ||| ||||| ||| |||||||||||||||||    
T  53662445 agagagaaagttgtacaaaaattgttacaaaatagttgtacaaatatcatttctc 53662499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 55960754 - 55960700
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||| |||| ||||||||||   ||||||||| |||||||||||||||||    
T  55960754 agagagaaaattgtacaaaagttataccaaaatggttatacaaatatcatttctc 55960700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 23094428 - 23094376
Alignment:
Q  14 agagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||||||  ||||||||| | |||||| || |||||||||||||||||    
T  23094428 agagaaagttgtctaaaagttatcacaaaatgattgtacaaatatcatttctc 23094376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 75
Target Start/End: Original strand, 24310554 - 24310590
Alignment:
Q  39 aaaaatggttctacaaatatcatttctccttgcaaaa 75  Q
    |||||||||| ||||||||||||||||| ||||||||    
T  24310554 aaaaatggttgtacaaatatcatttctcattgcaaaa 24310590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 25725713 - 25725765
Alignment:
Q  14 agagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||||||  ||||||| ||| ||| ||||| |||||||||||||||||    
T  25725713 agagaaagttgtcaaaaagttgttagaaagtggttgtacaaatatcatttctc 25725765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 42853991 - 42853939
Alignment:
Q  14 agagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||||||  ||||||| | ||||||| ||| |||||||||||||||||    
T  42853991 agagaaagttgtctaaaagttgtcaaaaaatagttgtacaaatatcatttctc 42853939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 77; Significance: 8e-36; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 86 - 213
Target Start/End: Original strand, 2779346 - 2779471
Alignment:
Q  86 aatgttggtcagcttcagcagaagggtctgattgttgtgtgattcggcaacatatgtgtaagggacgatatgaggattactggtgctcaaggattcccct 185  Q
    |||||||||||||||||||||||||| |||||||||||||  ||| |||| |||||||||||||| | | ||| ||||||  ||||||||||||||||||    
T  2779346 aatgttggtcagcttcagcagaagggactgattgttgtgt--ttcagcaagatatgtgtaagggatgttctgaagattaccagtgctcaaggattcccct 2779443  T
Q  186 gttatttgcaccggttgtgtggttggaa 213  Q
    ||||||||||| ||||||||||||||||    
T  2779444 gttatttgcactggttgtgtggttggaa 2779471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 1293102 - 1293157
Alignment:
Q  12 agagagaaagttgtg-caaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||||||||  |||||||| ||||||||||||| |||||||||||||||||    
T  1293102 agagagaaagttgtcacaaaagttgttaaaaaatggttgtacaaatatcatttctc 1293157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 7144631 - 7144577
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||||||||  ||||||||| | ||||||||| |||||||||||||||||    
T  7144631 agagagaaagttgtttaaaagttatcataaaatggttgtacaaatatcatttctc 7144577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 20985546 - 20985600
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||||||||| ||||| ||||  |||||||||| |||||||||||||||||    
T  20985546 agagagaaagttgtacaaaaattatacaaaaatggttgtacaaatatcatttctc 20985600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 31708424 - 31708370
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||||||||  ||||||| ||| ||||||||| |||||||||||||||||    
T  31708424 agagagaaagttgtcaaaaagttgttataaaatggttgtacaaatatcatttctc 31708370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 4292836 - 4292783
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttct 65  Q
    |||||||||||||| ||||| || | |||||||||||||||| |||||||||||    
T  4292836 agagagaaagttgtccaaaaattgtaaaaaaatggttctacatatatcatttct 4292783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 3031886 - 3031834
Alignment:
Q  14 agagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||||||| |||||||| |  |||||||||| |||||||||||||||||    
T  3031886 agagaaagttgtacaaaagttgtacaaaaatggttgtacaaatatcatttctc 3031834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 14914424 - 14914372
Alignment:
Q  14 agagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||||||| |||||||| | | ||||||||| |||||||||||||||||    
T  14914424 agagaaagttgtccaaaagttgtcacaaaatggttgtacaaatatcatttctc 14914372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 6940166 - 6940221
Alignment:
Q  12 agagagaaagttgtg-caaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||||||||  ||||| |||||| ||||||||| |||||||||||||||||    
T  6940166 agagagaaagttgtcacaaaaattattataaaatggttgtacaaatatcatttctc 6940221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 18695373 - 18695318
Alignment:
Q  12 agagagaaagttgtg-caaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||||||||  |||||||| ||| ||||||||| |||||||||||||||||    
T  18695373 agagagaaagttgtcacaaaagttgttacaaaatggttgtacaaatatcatttctc 18695318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 22098310 - 22098255
Alignment:
Q  12 agagagaaagttgtg-caaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||||||||  |||||||| ||| ||||||||| |||||||||||||||||    
T  22098310 agagagaaagttgtcacaaaagttgttagaaaatggttgtacaaatatcatttctc 22098255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 66
Target Start/End: Complemental strand, 40829453 - 40829414
Alignment:
Q  27 caaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||| |||||||||||||||| |||||||||||||||||    
T  40829453 caaaaattattaaaaaatggttgtacaaatatcatttctc 40829414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 62
Target Start/End: Original strand, 3154660 - 3154710
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatt 62  Q
    |||||||||||||| |||||||||| | ||||| ||| |||||||||||||    
T  3154660 agagagaaagttgtacaaaagttatcataaaatagttgtacaaatatcatt 3154710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 9594532 - 9594478
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||||||||| |||||||| | | ||| ||||| |||||||||||||||||    
T  9594532 agagagaaagttgtacaaaagttgtcacaaattggttgtacaaatatcatttctc 9594478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 9599745 - 9599799
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||||||||| |||||||| | | ||| ||||| |||||||||||||||||    
T  9599745 agagagaaagttgtacaaaagttgtcacaaattggttgtacaaatatcatttctc 9599799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 11881004 - 11881058
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||||||||  ||||||| |||||||||  || |||||||||||||||||    
T  11881004 agagagaaagttgtctaaaagttgttaaaaaataattgtacaaatatcatttctc 11881058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 12891113 - 12891167
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||| ||||| |||||||| |  |||||||||| |||||||||||||||||    
T  12891113 agagagaatgttgtacaaaagttgtgcaaaaatggttgtacaaatatcatttctc 12891167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 19271913 - 19271859
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||||||||  ||| ||| ||| ||||||||| |||||||||||||||||    
T  19271913 agagagaaagttgtctaaacgttgttacaaaatggttgtacaaatatcatttctc 19271859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 22920509 - 22920563
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||||||||| ||||| || ||| ||||||||| ||||||||| |||||||    
T  22920509 agagagaaagttgtccaaaatttgttacaaaatggttgtacaaatattatttctc 22920563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 25585473 - 25585527
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||| |||| |||||||| |  |||||||||| |||||||||||||||||    
T  25585473 agagagaaatttgtacaaaagttgtacaaaaatggttgtacaaatatcatttctc 25585527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 29765884 - 29765830
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||||||||| |||||||| |   ||||||||| |||||||||||||||||    
T  29765884 agagagaaagttgtacaaaagttgtactaaaatggttgtacaaatatcatttctc 29765830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 29803279 - 29803225
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||||||||  ||||||| | ||||||| ||| |||||||||||||||||    
T  29803279 agagagaaagttgtttaaaagttgtcaaaaaatagttgtacaaatatcatttctc 29803225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 30574394 - 30574448
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||||||||| |||||||| | | ||| ||||| |||||||||||||||||    
T  30574394 agagagaaagttgtacaaaagttgtcacaaattggttgtacaaatatcatttctc 30574448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 66
Target Start/End: Complemental strand, 35814503 - 35814453
Alignment:
Q  16 agaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||||| | |||||||| | ||||||||| |||||||||||||||||    
T  35814503 agaaagttgtaccaaagttatcacaaaatggttgtacaaatatcatttctc 35814453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 39032621 - 39032675
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||| ||||| |||||||| |  |||||||||| |||||||||||||||||    
T  39032621 agagagaaggttgtacaaaagttgtacaaaaatggttgtacaaatatcatttctc 39032675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 39788723 - 39788777
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||||||||| |||||||| | | | ||||||| |||||||||||||||||    
T  39788723 agagagaaagttgtccaaaagttgtcacataatggttgtacaaatatcatttctc 39788777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 285274 - 285229
Alignment:
Q  19 aagttgtgcaaaagttattaaaaaatggttctacaaatatcatttc 64  Q
    |||||||  |||| |||||| |||||||||||||||||||||||||    
T  285274 aagttgtcaaaaaattattagaaaatggttctacaaatatcatttc 285229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 13 - 66
Target Start/End: Complemental strand, 2050980 - 2050927
Alignment:
Q  13 gagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||| |||||||| ||||| || ||| ||||||||| |||||||||||||||||    
T  2050980 gagataaagttgtccaaaaattgttacaaaatggttgtacaaatatcatttctc 2050927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 12 - 64
Target Start/End: Original strand, 14321971 - 14322024
Alignment:
Q  12 agagagaaagttgtg-caaaagttattaaaaaatggttctacaaatatcatttc 64  Q
    ||||||||||||||  |||||||| ||| ||||||||| |||||||||||||||    
T  14321971 agagagaaagttgtcacaaaagttgttagaaaatggttgtacaaatatcatttc 14322024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 16690552 - 16690499
Alignment:
Q  14 agagaaagttgtg-caaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||||||  |||||||| |||| |||||||| |||||||||||||||||    
T  16690552 agagaaagttgtcacaaaagttgttaagaaatggttgtacaaatatcatttctc 16690499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 13 - 66
Target Start/End: Original strand, 36416080 - 36416133
Alignment:
Q  13 gagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||||||||  |||| || ||| ||||||||| |||||||||||||||||    
T  36416080 gagagaaagttgtcaaaaaattgttagaaaatggttgtacaaatatcatttctc 36416133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 67
Target Start/End: Complemental strand, 2629857 - 2629817
Alignment:
Q  27 caaaagttattaaaaaatggttctacaaatatcatttctcc 67  Q
    |||||||| | ||||||||||| ||||||||||||||||||    
T  2629857 caaaagttgtcaaaaaatggttgtacaaatatcatttctcc 2629817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 18729308 - 18729360
Alignment:
Q  14 agagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||| ||||| |||||||| |  |||||||||| |||||||||||||||||    
T  18729308 agagaaggttgtacaaaagttgtacaaaaatggttgtacaaatatcatttctc 18729360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 26627382 - 26627330
Alignment:
Q  14 agagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||||||  |||||||  |||||||| ||| |||||||||||||||||    
T  26627382 agagaaagttgtctaaaagttgataaaaaatagttgtacaaatatcatttctc 26627330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 32425003 - 32424951
Alignment:
Q  14 agagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||||||  |||| |||||| ||||||| | |||||||||||||||||    
T  32425003 agagaaagttgttaaaaaattattagaaaatgggtatacaaatatcatttctc 32424951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 32873168 - 32873220
Alignment:
Q  14 agagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||||||  ||||||| ||| ||| ||||| |||||||||||||||||    
T  32873168 agagaaagttgtcaaaaagttgttagaaattggttgtacaaatatcatttctc 32873220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 33393686 - 33393634
Alignment:
Q  14 agagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||||||  ||||||| | | ||||||||| |||||||||||||||||    
T  33393686 agagaaagttgttaaaaagttgtgagaaaatggttgtacaaatatcatttctc 33393634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 1e-19; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 68 - 148
Target Start/End: Original strand, 31958615 - 31958693
Alignment:
Q  68 ttgcaaaataatctctttaatgttggtcagcttcagcagaagggtctgattgttgtgtgattcggcaacatatgtgtaagg 148  Q
    |||||||||| ||| ||||||||||||||||||||||||||||| |||||||||||||  ||| |||| ||||||||||||    
T  31958615 ttgcaaaatattctgtttaatgttggtcagcttcagcagaagggactgattgttgtgt--ttcagcaagatatgtgtaagg 31958693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 179 - 253
Target Start/End: Original strand, 31959210 - 31959284
Alignment:
Q  179 ttcccctgttatttgcaccggttgtgtggttggaaagcggcacagagaagctattccaaagattagttcttggag 253  Q
    ||||||||||||||||||  |||||||||||||||||| |||||| ||| ||||||||||||  |||||||||||    
T  31959210 ttcccctgttatttgcacttgttgtgtggttggaaagcagcacagggaatctattccaaagaagagttcttggag 31959284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 29168779 - 29168725
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||||||||||||||||| | ||||||||||| |||||||||||||||||    
T  29168779 agagagaaagttgtgcaaaagttgtcaaaaaatggttgtacaaatatcatttctc 29168725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 19637281 - 19637229
Alignment:
Q  14 agagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||||||| ||||||||||  |||||||||| |||||||||||||||||    
T  19637281 agagaaagttgtacaaaagttatacaaaaatggttgtacaaatatcatttctc 19637229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 19835874 - 19835822
Alignment:
Q  14 agagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||||||| ||||||||||  |||||||||| |||||||||||||||||    
T  19835874 agagaaagttgtacaaaagttatacaaaaatggttgtacaaatatcatttctc 19835822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 27529581 - 27529529
Alignment:
Q  14 agagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||||||| |||||||| |  ||||||||||||||||||||||||||||    
T  27529581 agagaaagttgtacaaaagttgtacaaaaatggttctacaaatatcatttctc 27529529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 12 - 68
Target Start/End: Original strand, 31635827 - 31635883
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctcct 68  Q
    ||||||||||||||  ||||||| ||| ||||||||| |||||||||||||||||||    
T  31635827 agagagaaagttgtcaaaaagttgttagaaaatggttgtacaaatatcatttctcct 31635883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 5031978 - 5031923
Alignment:
Q  12 agagagaaagttgt-gcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||||||||| ||||||||| ||| ||||||||| |||||||||||||||||    
T  5031978 agagagaaagttgtcgcaaaagttgttacaaaatggttgtacaaatatcatttctc 5031923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 66
Target Start/End: Complemental strand, 24766191 - 24766152
Alignment:
Q  27 caaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  24766191 caaaagttattaaaaaatggttgtacaaatatcatttctc 24766152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 1052513 - 1052567
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||| ||||||||  ||||||| ||||||||||||| |||||||||||||||||    
T  1052513 agagataaagttgtctaaaagttgttaaaaaatggttgtacaaatatcatttctc 1052567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 4723620 - 4723566
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||||||||  ||||||| ||||||||||||| |||| ||||||||||||    
T  4723620 agagagaaagttgtaaaaaagttgttaaaaaatggttgtacatatatcatttctc 4723566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 5954500 - 5954554
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||||||||| |||||||||| | | ||||||| |||||||||||||||||    
T  5954500 agagagaaagttgtccaaaagttatcacataatggttgtacaaatatcatttctc 5954554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 8352889 - 8352835
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||| ||||  ||||||||||||||||| ||| |||||||||||||||||    
T  8352889 agagagaaaattgtctaaaagttattaaaaaatagttgtacaaatatcatttctc 8352835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 30340047 - 30339993
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||||||||| |||||||| |  |||||||||| |||||||||||||||||    
T  30340047 agagagaaagttgtacaaaagttgtacaaaaatggttgtacaaatatcatttctc 30339993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 39737703 - 39737757
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||||||||| |||||||| ||| ||| ||||| |||||||||||||||||    
T  39737703 agagagaaagttgtccaaaagttgttagaaattggttgtacaaatatcatttctc 39737757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 42141611 - 42141665
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||||||||| |||||||| | ||||||||||| |||| ||||||||||||    
T  42141611 agagagaaagttgtccaaaagttgtgaaaaaatggttgtacatatatcatttctc 42141665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 44484673 - 44484727
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||||||||| ||||| || ||| ||||||||| |||||||||||||||||    
T  44484673 agagagaaagttgtacaaaaattgttacaaaatggttgtacaaatatcatttctc 44484727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 66
Target Start/End: Original strand, 36909861 - 36909914
Alignment:
Q  13 gagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||||||| |||||||| | | ||||||||| |||||||||||||||||    
T  36909861 gagagaaagttgtccaaaagttgtcacaaaatggttgtacaaatatcatttctc 36909914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 6336307 - 6336252
Alignment:
Q  12 agagagaaagttgtg-caaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||||||||  |||||||| ||| ||||||||| |||||||||||||||||    
T  6336307 agagagaaagttgtcacaaaagttgttagaaaatggttgtacaaatatcatttctc 6336252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 11126518 - 11126463
Alignment:
Q  12 agagagaaagtt-gtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||||||| || ||||||||||  |||||||||| |||||||||||||||||    
T  11126518 agagagaaagtttgtacaaaagttatgcaaaaatggttgtacaaatatcatttctc 11126463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 12784415 - 12784470
Alignment:
Q  12 agagagaaagttgtg-caaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||||||||  ||||| |||||| ||||||||| |||||||||||||||||    
T  12784415 agagagaaagttgtcacaaaaattattataaaatggttgtacaaatatcatttctc 12784470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 18737890 - 18737945
Alignment:
Q  12 agagagaaagttgtg-caaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||||||||  |||||||| ||||||||||| | |||||||||||||||||    
T  18737890 agagagaaagttgtcacaaaagttgttaaaaaatggatatacaaatatcatttctc 18737945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 66
Target Start/End: Complemental strand, 35334559 - 35334520
Alignment:
Q  27 caaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||||||| ||||||||| |||||||||||||||||    
T  35334559 caaaagttattataaaatggttgtacaaatatcatttctc 35334520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 66
Target Start/End: Original strand, 40874293 - 40874332
Alignment:
Q  27 caaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||| ||||||||||||| |||||||||||||||||    
T  40874293 caaaagttgttaaaaaatggttgtacaaatatcatttctc 40874332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 3959948 - 3959894
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||| ||||| ||||||| | |||||| |||| |||||||||||||||||    
T  3959948 agagagaaaattgtgtaaaagttgtcaaaaaaaggttgtacaaatatcatttctc 3959894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 4114438 - 4114492
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||||||| | |||||||||| | ||||||||| ||||||||| |||||||    
T  4114438 agagagaaagttatacaaaagttataataaaatggttgtacaaatataatttctc 4114492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 5852528 - 5852474
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||| ||||| |||||||| |  |||||||||| |||||||||||||||||    
T  5852528 agagagaaggttgtacaaaagttgtacaaaaatggttgtacaaatatcatttctc 5852474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 6328721 - 6328667
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||||||||| ||||| ||||   ||||||||| |||||||||||||||||    
T  6328721 agagagaaagttgtacaaaaattataccaaaatggttgtacaaatatcatttctc 6328667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 6639489 - 6639543
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||||||||  ||||||| ||| ||||||||| ||||||||| |||||||    
T  6639489 agagagaaagttgttaaaaagttgttagaaaatggttgtacaaatattatttctc 6639543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 7498008 - 7498062
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||||||||  ||||||| | | ||||||||| |||||||||||||||||    
T  7498008 agagagaaagttgtcaaaaagttgtaataaaatggttgtacaaatatcatttctc 7498062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 12256955 - 12256901
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||| ||||| ||||||||||  ||||||| || |||||||||||||||||    
T  12256955 agagagaaggttgtacaaaagttatacaaaaatgattgtacaaatatcatttctc 12256901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 13711115 - 13711061
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||||||||   |||||||| ||||| ||||| |||||||||||||||||    
T  13711115 agagagaaagttgtcacaaagttatcaaaaagtggttgtacaaatatcatttctc 13711061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 14797667 - 14797721
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||||||||  ||||||| ||| ||| ||||| |||||||||||||||||    
T  14797667 agagagaaagttgtcaaaaagttgttagaaattggttgtacaaatatcatttctc 14797721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 18749380 - 18749434
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||| ||||| ||||| ||||  |||||||||| |||||||||||||||||    
T  18749380 agagagaaggttgtacaaaaattatacaaaaatggttgtacaaatatcatttctc 18749434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 29893664 - 29893610
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||||||||| |||||||||| | ||| | ||| |||||||||||||||||    
T  29893664 agagagaaagttgtacaaaagttatcacaaattagttgtacaaatatcatttctc 29893610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 66
Target Start/End: Complemental strand, 34913130 - 34913092
Alignment:
Q  28 aaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||||||||||||| || |||||||||||||||||    
T  34913130 aaaagttattaaaaaatgattgtacaaatatcatttctc 34913092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 3196104 - 3196161
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctcctt 69  Q
    |||||||||||||| |||||||| | | ||| || || ||||||||||||||||||||    
T  3196104 agagagaaagttgtacaaaagttgtcacaaattgattgtacaaatatcatttctcctt 3196161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 9384429 - 9384376
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttct 65  Q
    |||||||||||||| ||||| ||||  |||||| ||| ||||||||||||||||    
T  9384429 agagagaaagttgtacaaaaattatgtaaaaatagttgtacaaatatcatttct 9384376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 34373059 - 34373006
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttct 65  Q
    |||||||||||||| ||||| ||||   ||||||||| ||||||||||||||||    
T  34373059 agagagaaagttgtacaaaaattataccaaaatggttgtacaaatatcatttct 34373006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 15 - 68
Target Start/End: Original strand, 39247483 - 39247536
Alignment:
Q  15 gagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctcct 68  Q
    |||| ||||||  ||||||||| | ||||||||| |||||||||||||||||||    
T  39247483 gagagagttgtcaaaaagttatcacaaaatggttgtacaaatatcatttctcct 39247536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 66
Target Start/End: Complemental strand, 11980699 - 11980651
Alignment:
Q  18 aaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||  ||||||| ||| ||||||||| |||||||||||||||||    
T  11980699 aaagttgtcaaaaagttgttagaaaatggttgtacaaatatcatttctc 11980651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 12208494 - 12208442
Alignment:
Q  14 agagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||||| | |||||||| |  |||||||||| |||||||||||||||||    
T  12208494 agagaaagttatacaaaagttgtacaaaaatggttgtacaaatatcatttctc 12208442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 33559691 - 33559639
Alignment:
Q  14 agagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||||||| ||||| ||||   ||||||||| |||||||||||||||||    
T  33559691 agagaaagttgtccaaaaattatactaaaatggttgtacaaatatcatttctc 33559639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 26501349 - 26501295
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||||||||| |||||||||||| ||||||||| |||||||||||||||||    
T  26501349 agagagaaagttgtccaaaagttattacaaaatggttgtacaaatatcatttctc 26501295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 12999839 - 12999893
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||||||||| |||||||| ||| ||||||||| |||||||||||||||||    
T  12999839 agagagaaagttgtacaaaagttgttagaaaatggttgtacaaatatcatttctc 12999893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 27352684 - 27352630
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||||||||| |||||||||| | ||||||||| |||||||||||||||||    
T  27352684 agagagaaagttgtccaaaagttatcacaaaatggttgtacaaatatcatttctc 27352630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 3919354 - 3919300
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||||||||| ||||| |||| | ||||||||| |||||||||||||||||    
T  3919354 agagagaaagttgtccaaaaattataacaaaatggttgtacaaatatcatttctc 3919300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 8577519 - 8577573
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||| ||||| ||||||||||  |||||||||| |||||||||||||||||    
T  8577519 agagagaaggttgtacaaaagttatacaaaaatggttgtacaaatatcatttctc 8577573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 18541068 - 18541122
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||||||||  ||||||| ||| ||||||||| |||||||||||||||||    
T  18541068 agagagaaagttgtcaaaaagttgttagaaaatggttgtacaaatatcatttctc 18541122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 25989001 - 25989055
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||| ||||  ||||||| ||||||||||||| |||||||||||||||||    
T  25989001 agagagaaaattgtctaaaagttgttaaaaaatggttgtacaaatatcatttctc 25989055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 29489376 - 29489430
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||||||||| | |||||||| | ||||||||| |||||||||||||||||    
T  29489376 agagagaaagttgtaccaaagttatcacaaaatggttgtacaaatatcatttctc 29489430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 43457836 - 43457890
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||||||||| ||||||||||   ||||||||| |||||||||||||||||    
T  43457836 agagagaaagttgtccaaaagttatcgcaaaatggttgtacaaatatcatttctc 43457890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 49621417 - 49621363
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||||||||  |||| |||||| ||||||||| |||||||||||||||||    
T  49621417 agagagaaagttgtctaaaaattattacaaaatggttgtacaaatatcatttctc 49621363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 73
Target Start/End: Original strand, 35972821 - 35972882
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctccttgcaa 73  Q
    |||||||||||||| |||||||| | | |||||||||  |||||||||||||||| ||||||    
T  35972821 agagagaaagttgtacaaaagttgtcacaaaatggttgaacaaatatcatttctcgttgcaa 35972882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 12708142 - 12708090
Alignment:
Q  14 agagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||| ||||  ||||||| ||| |||||||||||||||||||||||||||    
T  12708142 agagaaaattgtcaaaaagttgttagaaaatggttctacaaatatcatttctc 12708090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 12713596 - 12713544
Alignment:
Q  14 agagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||| ||||  ||||||| ||| |||||||||||||||||||||||||||    
T  12713596 agagaaaattgtcaaaaagttgttagaaaatggttctacaaatatcatttctc 12713544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 12717687 - 12717635
Alignment:
Q  14 agagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||| ||||  ||||||| ||| |||||||||||||||||||||||||||    
T  12717687 agagaaaattgtcaaaaagttgttagaaaatggttctacaaatatcatttctc 12717635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 26839435 - 26839383
Alignment:
Q  13 gagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttct 65  Q
    ||||||||||||| |||||||||| | ||||||||| |||||||| |||||||    
T  26839435 gagagaaagttgtacaaaagttatcataaaatggttgtacaaataccatttct 26839383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 68
Target Start/End: Original strand, 40605438 - 40605494
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctcct 68  Q
    ||||||||||||||  |||| |||| |||||| |||| |||||||||||||||||||    
T  40605438 agagagaaagttgtctaaaaattatcaaaaaaaggttgtacaaatatcatttctcct 40605494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 43056770 - 43056714
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctcct 68  Q
    |||||||||||||| ||||| |||||  ||||||||| ||||||||||||| |||||    
T  43056770 agagagaaagttgtccaaaaattattgcaaaatggttgtacaaatatcattcctcct 43056714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 4213127 - 4213072
Alignment:
Q  12 agagagaaagttgtg-caaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||||||||  |||||||||| ||||||||||| | |||||||||||||||    
T  4213127 agagagaaagttgtcacaaaagttatcaaaaaatggttgttcaaatatcatttctc 4213072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 21433417 - 21433472
Alignment:
Q  12 agagagaaagttgtg-caaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||||||||  |||||||| ||| ||||||||| |||||||||||||||||    
T  21433417 agagagaaagttgtcacaaaagttgttacaaaatggttgtacaaatatcatttctc 21433472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 47642623 - 47642678
Alignment:
Q  12 agagagaaagttgtg-caaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||||||||  |||||||||| ||||||||||| | |||||||||||||||    
T  47642623 agagagaaagttgtcacaaaagttatcaaaaaatggttgttcaaatatcatttctc 47642678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 66
Target Start/End: Original strand, 49020436 - 49020475
Alignment:
Q  27 caaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||| ||||||||||||| |||||||||||||||||    
T  49020436 caaaagttgttaaaaaatggttgtacaaatatcatttctc 49020475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 49931608 - 49931553
Alignment:
Q  12 agagagaaagttgtg-caaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||||||||  |||||||| |||||||||| || |||||||||||||||||    
T  49931608 agagagaaagttgtcacaaaagttgttaaaaaatgattgtacaaatatcatttctc 49931553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 5959442 - 5959388
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||||||||| |||||||| | | | ||||||| |||||||||||||||||    
T  5959442 agagagaaagttgtccaaaagttgtcacataatggttatacaaatatcatttctc 5959388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 65
Target Start/End: Original strand, 9897594 - 9897632
Alignment:
Q  27 caaaagttattaaaaaatggttctacaaatatcatttct 65  Q
    |||||||| | ||||||||||||||||||||||||||||    
T  9897594 caaaagttgtcaaaaaatggttctacaaatatcatttct 9897632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 11097901 - 11097955
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||||||||| |||||||| | | ||||||| | |||||||||||||||||    
T  11097901 agagagaaagttgttcaaaagttgtcacaaaatggatgtacaaatatcatttctc 11097955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 23554805 - 23554751
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||| ||||||||  |||| |||| ||||||||||| |||||||||||||||||    
T  23554805 agagataaagttgtttaaaaattatcaaaaaatggttgtacaaatatcatttctc 23554751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 26585190 - 26585244
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||| |||||||| |||||||||| | ||||| ||| |||||||||||||||||    
T  26585190 agagaaaaagttgtacaaaagttatcacaaaatagttgtacaaatatcatttctc 26585244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 27810264 - 27810318
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||||||||  ||||||| ||| ||| ||||| |||||||||||||||||    
T  27810264 agagagaaagttgtcaaaaagttgttagaaattggttgtacaaatatcatttctc 27810318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 32216056 - 32216002
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||||||||  |||| ||||||||||||  || |||||||||||||||||    
T  32216056 agagagaaagttgtctaaaatttattaaaaaattattgtacaaatatcatttctc 32216002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 40612168 - 40612114
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||||||||| | ||||| | | ||||||||| |||||||||||||||||    
T  40612168 agagagaaagttgtggagaagttgtcacaaaatggttgtacaaatatcatttctc 40612114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 42256514 - 42256460
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||||||||| | |||||| | | ||||||||| |||||||||||||||||    
T  42256514 agagagaaagttgtaccaaagttgtcacaaaatggttgtacaaatatcatttctc 42256460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 42843361 - 42843415
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||| ||| || |||||||||||| ||||||| ||| |||||||||||||||||    
T  42843361 agagaaaaaattatgcaaaagttatcaaaaaattgttgtacaaatatcatttctc 42843415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 44672047 - 44672101
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||| ||||  ||||||| |||||||||| || |||||||||||||||||    
T  44672047 agagagaaaattgtcaaaaagttgttaaaaaatgattgtacaaatatcatttctc 44672101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 51193148 - 51193202
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||||||||| ||||| || ||| ||||||| | |||||||||||||||||    
T  51193148 agagagaaagttgtccaaaaattgttataaaatggatgtacaaatatcatttctc 51193202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 69
Target Start/End: Complemental strand, 33076157 - 33076116
Alignment:
Q  28 aaaagttattaaaaaatggttctacaaatatcatttctcctt 69  Q
    ||||||| ||| ||||||||| ||||||||||||||||||||    
T  33076157 aaaagttgttagaaaatggttgtacaaatatcatttctcctt 33076116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 29 - 66
Target Start/End: Original strand, 47059913 - 47059950
Alignment:
Q  29 aaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||| ||||||||||||| |||||||||||||||||    
T  47059913 aaagttgttaaaaaatggttgtacaaatatcatttctc 47059950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 67
Target Start/End: Complemental strand, 649823 - 649767
Alignment:
Q  12 agagagaaagttgtg-caaaagttattaaaaaatggttctacaaatatcatttctcc 67  Q
    ||||||||||||||  |||||||| | ||||||||||| | ||||||||||||||||    
T  649823 agagagaaagttgtcacaaaagttgtaaaaaaatggttgttcaaatatcatttctcc 649767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 1100269 - 1100217
Alignment:
Q  14 agagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||||||| ||||| || |  |||||||||| |||||||||||||||||    
T  1100269 agagaaagttgtacaaaaattgtacaaaaatggttgtacaaatatcatttctc 1100217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 3606113 - 3606165
Alignment:
Q  14 agagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||||||  ||||||| ||| ||| ||||| |||||||||||||||||    
T  3606113 agagaaagttgtcaaaaagttgttagaaattggttgtacaaatatcatttctc 3606165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 9445160 - 9445108
Alignment:
Q  14 agagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||||||  ||||||| ||| ||||||||| ||| |||||||||||||    
T  9445160 agagaaagttgtcaaaaagttgttacaaaatggttgtacgaatatcatttctc 9445108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 66
Target Start/End: Complemental strand, 42615908 - 42615860
Alignment:
Q  18 aaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||  |||| ||||||||||||| || |||||||||||||||||    
T  42615908 aaagttgtcaaaaaattattaaaaaatgattgtacaaatatcatttctc 42615860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 76
Target Start/End: Complemental strand, 49596289 - 49596225
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctccttgcaaaat 76  Q
    ||||||||||||||  |||| || | | ||||||||| ||||||||||||||||| || ||||||    
T  49596289 agagagaaagttgtcaaaaaattgtaataaaatggttgtacaaatatcatttctctttccaaaat 49596225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 63
Target Start/End: Original strand, 51231322 - 51231374
Alignment:
Q  12 agagagaaagttgtgc-aaaagttattaaaaaatggttctacaaatatcattt 63  Q
    ||||||| |||||||| ||||||| ||||||| ||||| ||||||||||||||    
T  51231322 agagagagagttgtgccaaaagttgttaaaaagtggttgtacaaatatcattt 51231374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 67
Target Start/End: Complemental strand, 52437549 - 52437493
Alignment:
Q  12 agagagaaagttgtg-caaaagttattaaaaaatggttctacaaatatcatttctcc 67  Q
    ||||||||||||||  ||||| |||||||||||||||| || | |||||||||||||    
T  52437549 agagagaaagttgtcacaaaaattattaaaaaatggttgtatatatatcatttctcc 52437493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 25614840 - 25614892
Alignment:
Q  14 agagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||||||||||||||||| ||||||||| | |||||||||||||||||    
T  25614840 agagaaagttgtgcaaaagttatcaaaaaatggatgtacaaatatcatttctc 25614892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 67
Target Start/End: Complemental strand, 3341753 - 3341698
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctcc 67  Q
    ||||||||||| ||  ||||||| ||||||||||||| ||||||||||||||||||    
T  3341753 agagagaaagtcgtcgaaaagttcttaaaaaatggttgtacaaatatcatttctcc 3341698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 28081799 - 28081853
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||||||||  |||| |||||| ||||||||| |||||||||||||||||    
T  28081799 agagagaaagttgtaaaaaaattattacaaaatggttgtacaaatatcatttctc 28081853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 16 - 66
Target Start/End: Complemental strand, 29763880 - 29763830
Alignment:
Q  16 agaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||||| |||||||||| | ||||||||| |||||||||||||||||    
T  29763880 agaaagttgtacaaaagttatcacaaaatggttgtacaaatatcatttctc 29763830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 33050237 - 33050183
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||||||||| |||||||| | | ||||||||| |||||||||||||||||    
T  33050237 agagagaaagttgtacaaaagttgtcacaaaatggttgtacaaatatcatttctc 33050183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 11070280 - 11070228
Alignment:
Q  14 agagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||||||| ||||||||||   ||||||||| |||||||||||||||||    
T  11070280 agagaaagttgtacaaaagttatactaaaatggttgtacaaatatcatttctc 11070228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 63
Target Start/End: Original strand, 37385250 - 37385301
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcattt 63  Q
    |||||||||||||| |||||||| | ||||||| ||| ||||||||||||||    
T  37385250 agagagaaagttgtacaaaagttgtcaaaaaatagttgtacaaatatcattt 37385301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 15 - 66
Target Start/End: Complemental strand, 42467255 - 42467204
Alignment:
Q  15 gagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||| |||  |||| |||||||||||||||| |||||||||||||||||    
T  42467255 gagaaagctgtctaaaaattattaaaaaatggttgtacaaatatcatttctc 42467204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 63
Target Start/End: Complemental strand, 45335916 - 45335865
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcattt 63  Q
    |||||||||||||| |||||||| |  |||||||||| ||||||||||||||    
T  45335916 agagagaaagttgtacaaaagttgtacaaaaatggttgtacaaatatcattt 45335865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 2347076 - 2347130
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||||||||| | |||||| | | ||||||||| |||||||||||||||||    
T  2347076 agagagaaagttgtaccaaagttgtcacaaaatggttgtacaaatatcatttctc 2347130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 4971344 - 4971290
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||||||||  ||||||| | | ||||||||| |||||||||||||||||    
T  4971344 agagagaaagttgtataaaagttgtcacaaaatggttgtacaaatatcatttctc 4971290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 5378681 - 5378627
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||||||||  ||||||| |  |||||||||| |||||||||||||||||    
T  5378681 agagagaaagttgtcaaaaagttgtataaaaatggttgtacaaatatcatttctc 5378627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 9055321 - 9055267
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||||||||  ||||||| ||| ||| ||||| |||||||||||||||||    
T  9055321 agagagaaagttgtcaaaaagttgttagaaattggttgtacaaatatcatttctc 9055267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 19426634 - 19426580
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||||||||  ||||||| | | ||||||||| |||||||||||||||||    
T  19426634 agagagaaagttgtcaaaaagttgtcacaaaatggttgtacaaatatcatttctc 19426580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 30864434 - 30864488
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||||||||| |||||||| | | ||| ||||| |||||||||||||||||    
T  30864434 agagagaaagttgtacaaaagttgtcacaaattggttgtacaaatatcatttctc 30864488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 37392097 - 37392043
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||| ||||||||  ||||||| | ||||||||||| |||||||||||||||||    
T  37392097 agagataaagttgtttaaaagttgtcaaaaaatggttgtacaaatatcatttctc 37392043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 38259116 - 38259066
Alignment:
Q  14 agagaaagttgtg-caaaagttattaaaaaatggttctacaaatatcattt 63  Q
    ||||||||||||  |||||||||| ||||||||||| ||||||||||||||    
T  38259116 agagaaagttgtcacaaaagttatcaaaaaatggttgtacaaatatcattt 38259066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 40693545 - 40693599
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||||||||  ||||||| | ||||||| ||| |||||||||||||||||    
T  40693545 agagagaaagttgtctaaaagttgtcaaaaaatagttgtacaaatatcatttctc 40693599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 42060710 - 42060656
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||||||||  |||||||||   ||||||||| |||||||||||||||||    
T  42060710 agagagaaagttgtcaaaaagttatagcaaaatggttgtacaaatatcatttctc 42060656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 66
Target Start/End: Complemental strand, 42671051 - 42671013
Alignment:
Q  28 aaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||| ||||||||||||||| |||||||||||||||    
T  42671051 aaaagttgttaaaaaatggttcttcaaatatcatttctc 42671013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 43079649 - 43079703
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||||||||| ||||| |||| | ||| ||||| |||||||||||||||||    
T  43079649 agagagaaagttgtccaaaaattatcacaaagtggttgtacaaatatcatttctc 43079703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 44175599 - 44175545
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||||||||| |||||||||| | |||||| || ||||||||| |||||||    
T  44175599 agagagaaagttgtacaaaagttatcacaaaatgattgtacaaatattatttctc 44175545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 48639400 - 48639454
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||| ||||| |||||||| |  |||||||||| |||||||||||||||||    
T  48639400 agagagaaggttgtacaaaagttgtacaaaaatggttgtacaaatatcatttctc 48639454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 17039211 - 17039158
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttct 65  Q
    |||||||||||||| ||||| ||||  |||||| ||| ||||||||||||||||    
T  17039211 agagagaaagttgtacaaaaattatacaaaaatagttgtacaaatatcatttct 17039158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 16567368 - 16567316
Alignment:
Q  14 agagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||| ||||  ||||||||| | ||||||||| |||||||||||||||||    
T  16567368 agagaaaattgtcaaaaagttataataaaatggttgtacaaatatcatttctc 16567316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 16598294 - 16598346
Alignment:
Q  14 agagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||| ||||  ||||||||| | ||||||||| |||||||||||||||||    
T  16598294 agagaaaattgtcaaaaagttataataaaatggttgtacaaatatcatttctc 16598346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 24700173 - 24700121
Alignment:
Q  14 agagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||||||  ||||||| ||| |||||| || |||||||||||||||||    
T  24700173 agagaaagttgtaaaaaagttgttacaaaatgattgtacaaatatcatttctc 24700121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 44511191 - 44511139
Alignment:
Q  14 agagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||||||| |||||||| | | ||||||||| ||| |||||||||||||    
T  44511191 agagaaagttgtacaaaagttgtcacaaaatggttgtacgaatatcatttctc 44511139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 52100313 - 52100261
Alignment:
Q  14 agagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||||||| ||||| |||||||||||||||| |||||||||||||||||    
T  52100313 agagaaagttgtacaaaaattattaaaaaatggttgtacaaatatcatttctc 52100261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 54233487 - 54233539
Alignment:
Q  14 agagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||||||| |||||||| | ||||||||||| |||||||||||||||||    
T  54233487 agagaaagttgtacaaaagttgtaaaaaaatggttgtacaaatatcatttctc 54233539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 11327162 - 11327108
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||||||||| |||||||| | | ||||||||| |||||||||||||||||    
T  11327162 agagagaaagttgtacaaaagttgtcacaaaatggttgtacaaatatcatttctc 11327108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 11335319 - 11335373
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||||||||  ||||||| ||| ||||||||| |||||||||||||||||    
T  11335319 agagagaaagttgtcaaaaagttgttagaaaatggttgtacaaatatcatttctc 11335373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 16267914 - 16267968
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||||||||| ||||| |||||| |||||| || |||||||||||||||||    
T  16267914 agagagaaagttgttcaaaaattattagaaaatgattatacaaatatcatttctc 16267968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 27162486 - 27162540
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||||||||| |||||||| ||| ||||||||| ||||||||||| |||||    
T  27162486 agagagaaagttgttcaaaagttgttacaaaatggttgtacaaatatcacttctc 27162540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 36869854 - 36869908
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||||||||  ||||||| | ||||||||||| |||||||||||||||||    
T  36869854 agagagaaagttgtctaaaagttgtcaaaaaatggttgtacaaatatcatttctc 36869908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 48944727 - 48944781
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||| |||| |||||||| ||| ||||||||| |||||||||||||||||    
T  48944727 agagagaaaattgtacaaaagttgttagaaaatggttgtacaaatatcatttctc 48944781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 49761203 - 49761257
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||||||||| ||||| || ||| ||||||||| |||||||||||||||||    
T  49761203 agagagaaagttgtacaaaaattgttagaaaatggttgtacaaatatcatttctc 49761257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 53133969 - 53134023
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||||||||  |||| |||||| ||||||||| |||||||||||||||||    
T  53133969 agagagaaagttgttaaaaaattattataaaatggttttacaaatatcatttctc 53134023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 73
Target Start/End: Original strand, 40159855 - 40159916
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctccttgcaa 73  Q
    ||||||||||||||  ||||||| ||| ||||| ||| ||||||||||||||||| ||||||    
T  40159855 agagagaaagttgtcaaaaagttgttagaaaatagttgtacaaatatcatttctctttgcaa 40159916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 37754501 - 37754445
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctcct 68  Q
    |||||||||||||| ||||| |||||| ||||| | | |||||||||||||||||||    
T  37754501 agagagaaagttgtccaaaaattattataaaatagatgtacaaatatcatttctcct 37754445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 67
Target Start/End: Complemental strand, 49021750 - 49021710
Alignment:
Q  27 caaaagttattaaaaaatggttctacaaatatcatttctcc 67  Q
    |||||||||||||||||||| | ||||||||||||||||||    
T  49021750 caaaagttattaaaaaatggatgtacaaatatcatttctcc 49021710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 14839063 - 14839118
Alignment:
Q  13 gagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctcct 68  Q
    ||||||| ||||| |||||||| |  |||||||||| |||||||||||||||||||    
T  14839063 gagagaaggttgtacaaaagttgtacaaaaatggttgtacaaatatcatttctcct 14839118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 19150335 - 19150390
Alignment:
Q  12 agagagaaagttgtg-caaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||||||||  |||||||| |||||||||| || |||||||||||||||||    
T  19150335 agagagaaagttgtcacaaaagttgttaaaaaatgattgtacaaatatcatttctc 19150390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 26550292 - 26550237
Alignment:
Q  12 agagagaaagttgtg-caaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||||||||  ||||| |||||||||||||||| | |||||||||||||||    
T  26550292 agagagaaagttgtcacaaaaattattaaaaaatggttgtgcaaatatcatttctc 26550237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 27168698 - 27168753
Alignment:
Q  12 agagagaaagttgtg-caaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||||||||  ||||| |||||||||||||||| | |||||||||||||||    
T  27168698 agagagaaagttgtcacaaaaattattaaaaaatggttgttcaaatatcatttctc 27168753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 29573372 - 29573427
Alignment:
Q  12 agagagaaagttgtg-caaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||||||||  |||||||| ||| ||||||||| |||||||||||||||||    
T  29573372 agagagaaagttgtcacaaaagttgttacaaaatggttgtacaaatatcatttctc 29573427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 37894259 - 37894314
Alignment:
Q  12 agagagaaagttgtg-caaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||||||||  |||||||| ||| ||||||||| |||||||||||||||||    
T  37894259 agagagaaagttgtcacaaaagttgttagaaaatggttgtacaaatatcatttctc 37894314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 63
Target Start/End: Complemental strand, 41369651 - 41369600
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcattt 63  Q
    ||||||||||||||  |||| |||||| ||||||||| ||||||||||||||    
T  41369651 agagagaaagttgtcaaaaaattattagaaaatggttgtacaaatatcattt 41369600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 48353051 - 48352996
Alignment:
Q  12 agagagaaagttgtg-caaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||||||||  |||||||| ||||||||||| | |||||||||||||||||    
T  48353051 agagagaaagttgtcacaaaagttgttaaaaaatggatgtacaaatatcatttctc 48352996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 66
Target Start/End: Original strand, 51137068 - 51137107
Alignment:
Q  27 caaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||||||||||||| ||| |||||||||||||||||    
T  51137068 caaaagttattaaaaaatagttgtacaaatatcatttctc 51137107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 66
Target Start/End: Original strand, 52963348 - 52963387
Alignment:
Q  27 caaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||| ||||||||||||| |||||||||||||||||    
T  52963348 caaaagttgttaaaaaatggttgtacaaatatcatttctc 52963387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 7231 - 7285
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||||||||| |||||||| | | |||||| || |||||||||||||||||    
T  7231 agagagaaagttgtccaaaagttgtcagaaaatgattgtacaaatatcatttctc 7285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 462418 - 462472
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||||||||  ||||||| | | ||||||||| |||||||||||||||||    
T  462418 agagagaaagttgtctaaaagttgtcacaaaatggttgtacaaatatcatttctc 462472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 1295386 - 1295332
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||| |||||||| |||||||||| | ||||| ||| |||||||||||||||||    
T  1295386 agagaaaaagttgtccaaaagttatcacaaaatagttgtacaaatatcatttctc 1295332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 2280231 - 2280177
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||||||||| |||||||| |   ||||||||| |||||||||||||||||    
T  2280231 agagagaaagttgtacaaaagttgtactaaaatggttgtacaaatatcatttctc 2280177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 2482691 - 2482745
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||||||||| |||||||| | | ||||||| | |||||||||||||||||    
T  2482691 agagagaaagttgttcaaaagttgtcacaaaatggatgtacaaatatcatttctc 2482745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 7351655 - 7351709
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||| |||| ||||| ||||  |||||||||| |||||||||||||||||    
T  7351655 agagagaaaattgtacaaaaattatacaaaaatggttgtacaaatatcatttctc 7351709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 8254081 - 8254027
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||||||||| | |||||| | | ||||||||| |||||||||||||||||    
T  8254081 agagagaaagttgtaccaaagttgtcacaaaatggttgtacaaatatcatttctc 8254027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 27937018 - 27936964
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||||||| | |||||||| | | ||||||||||||||||||| |||||||    
T  27937018 agagagaaagttattcaaaagttgtcacaaaatggttctacaaatattatttctc 27936964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 30664557 - 30664503
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||||||||| |||||||| |  ||||||| || |||||||||||||||||    
T  30664557 agagagaaagttgtacaaaagttgtacaaaaatgattgtacaaatatcatttctc 30664503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 32931935 - 32931989
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||||||||| |||||||| | | ||| ||||| |||||||||||||||||    
T  32931935 agagagaaagttgtacaaaagttgtcacaaattggttgtacaaatatcatttctc 32931989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 36819010 - 36818956
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||||||||| |||||||| | | ||| ||||| |||||||||||||||||    
T  36819010 agagagaaagttgtacaaaagttgtcacaaattggttgtacaaatatcatttctc 36818956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 39604263 - 39604317
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||||||||  |||| || || |||||||||| |||||||||||||||||    
T  39604263 agagagaaagttgtcaaaaaattgttgaaaaatggttgtacaaatatcatttctc 39604317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 42643289 - 42643235
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||||||||| |||||||| ||  ||| ||||| |||||||||||||||||    
T  42643289 agagagaaagttgtacaaaagttgttccaaattggttgtacaaatatcatttctc 42643235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 66
Target Start/End: Original strand, 45517678 - 45517728
Alignment:
Q  16 agaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||| | ||||||||||  |||||||||| |||||||||||||||||    
T  45517678 agaaagttatacaaaagttatacaaaaatggttgtacaaatatcatttctc 45517728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 47141617 - 47141671
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||||||||| ||||| ||||   ||||||||| |||||||||||||||||    
T  47141617 agagagaaagttgtacaaaaattataccaaaatggttgtacaaatatcatttctc 47141671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 50025715 - 50025769
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||||||||| ||||| ||||   ||||||||| |||||||||||||||||    
T  50025715 agagagaaagttgtacaaaatttataccaaaatggttgtacaaatatcatttctc 50025769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 51032641 - 51032695
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||| ||||  ||||||| ||| ||||||||| |||||||||||||||||    
T  51032641 agagagaaaattgtcaaaaagttgttagaaaatggttgtacaaatatcatttctc 51032695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 29 - 66
Target Start/End: Complemental strand, 46952986 - 46952949
Alignment:
Q  29 aaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  46952986 aaagttatcaaaaaatggttgtacaaatatcatttctc 46952949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 48205099 - 48205042
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctcctt 69  Q
    ||||||||| |||| ||||| ||||  ||||||| || ||||||||||||||||||||    
T  48205099 agagagaaaattgtacaaaaattatacaaaaatgattgtacaaatatcatttctcctt 48205042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 67
Target Start/End: Original strand, 3347138 - 3347194
Alignment:
Q  12 agagagaaagttgt-gcaaaagttattaaaaaatggttctacaaatatcatttctcc 67  Q
    |||||||||||||| ||||||||||| | ||||||| | | ||||||||||||||||    
T  3347138 agagagaaagttgtagcaaaagttatcacaaaatggatgttcaaatatcatttctcc 3347194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 8066409 - 8066353
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctcct 68  Q
    ||||||||||||||  ||||||| | | ||| ||||| |||||||||||||||||||    
T  8066409 agagagaaagttgtcaaaaagttgtgagaaagtggttgtacaaatatcatttctcct 8066353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 47849724 - 47849672
Alignment:
Q  14 agagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||||||  |||| |||| | ||||||||| |||||||||||||||||    
T  47849724 agagaaagttgtcaaaaaattatcacaaaatggttgtacaaatatcatttctc 47849672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 64
Target Start/End: Original strand, 47988502 - 47988554
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttc 64  Q
    ||||||||||||||  ||||||| ||| ||||| ||| |||||||||||||||    
T  47988502 agagagaaagttgtcaaaaagttgttagaaaatagttgtacaaatatcatttc 47988554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 64
Target Start/End: Original strand, 47997789 - 47997841
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttc 64  Q
    ||||||||||||||  ||||||| ||| ||||| ||| |||||||||||||||    
T  47997789 agagagaaagttgtcaaaaagttgttagaaaatagttgtacaaatatcatttc 47997841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 64
Target Start/End: Original strand, 48007076 - 48007128
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttc 64  Q
    ||||||||||||||  ||||||| ||| ||||| ||| |||||||||||||||    
T  48007076 agagagaaagttgtcaaaaagttgttagaaaatagttgtacaaatatcatttc 48007128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 50280106 - 50280158
Alignment:
Q  14 agagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||||||| |||||||| | | | ||||||| |||||||||||||||||    
T  50280106 agagaaagttgtacaaaagttgtcatagaatggttgtacaaatatcatttctc 50280158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 1158352 - 1158406
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||||||||| |||||||||||| ||| ||||| |||||||||||||||||    
T  1158352 agagagaaagttgttcaaaagttattagaaattggttgtacaaatatcatttctc 1158406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 14548840 - 14548894
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||||||||  |||| |||||||||||||||| |||||||||||||||||    
T  14548840 agagagaaagttgtctaaaaattattaaaaaatggttgtacaaatatcatttctc 14548894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 35937529 - 35937583
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||||||||| |||||||| ||| ||||||||| |||||||||||||||||    
T  35937529 agagagaaagttgtccaaaagttgttacaaaatggttgtacaaatatcatttctc 35937583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 12659106 - 12659049
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctcctt 69  Q
    ||||||||||||||  ||||||| ||||||| ||||| ||||||||||||||||||||    
T  12659106 agagagaaagttgtcaaaaagttgttaaaaattggttgtacaaatatcatttctcctt 12659049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 7376560 - 7376506
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||||||||| |||||||| ||| ||| ||||| |||||||||||||||||    
T  7376560 agagagaaagttgttcaaaagttgttagaaattggttgtacaaatatcatttctc 7376506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 27300400 - 27300346
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||||||||| |||||||| |  |||||||||| |||||||||||||||||    
T  27300400 agagagaaagttgtacaaaagttgtacaaaaatggttgtacaaatatcatttctc 27300346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 32674249 - 32674303
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||||||||| ||||||||||   ||||||||| |||||||||||||||||    
T  32674249 agagagaaagttgtacaaaagttataccaaaatggttgtacaaatatcatttctc 32674303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 23754725 - 23754778
Alignment:
Q  14 agagaaagttgtg-caaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||||||  |||||||||||||||||||||| | |||||||||||||||    
T  23754725 agagaaagttgtcacaaaagttattaaaaaatggttgttcaaatatcatttctc 23754778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 41703371 - 41703322
Alignment:
Q  14 agagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcattt 63  Q
    ||||||||||||  |||| || ||||||||||||||||||||||||||||    
T  41703371 agagaaagttgttaaaaaattgttaaaaaatggttctacaaatatcattt 41703322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 10591892 - 10591944
Alignment:
Q  14 agagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||||||| ||||||||||  |||||| ||| |||||||||||||||||    
T  10591892 agagaaagttgtacaaaagttatataaaaatagttgtacaaatatcatttctc 10591944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 14531673 - 14531621
Alignment:
Q  14 agagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||||||| |||||||||| | ||||| ||| |||||||||||||||||    
T  14531673 agagaaagttgtacaaaagttatcataaaatagttgtacaaatatcatttctc 14531621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 21649187 - 21649239
Alignment:
Q  14 agagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||||||| |||||||| |  |||||||||| |||||||||||||||||    
T  21649187 agagaaagttgtacaaaagttgtacaaaaatggttgtacaaatatcatttctc 21649239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 37873124 - 37873176
Alignment:
Q  14 agagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||||||  ||||||||| | ||||||||| |||||||||||||||||    
T  37873124 agagaaagttgtcaaaaagttatcataaaatggttttacaaatatcatttctc 37873176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 67177 - 67232
Alignment:
Q  12 agagagaaagttgtg-caaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||||||||  |||||||| ||| ||||||||| |||||||||||||||||    
T  67177 agagagaaagttgtcacaaaagttgttagaaaatggttgtacaaatatcatttctc 67232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 63
Target Start/End: Original strand, 6105453 - 6105504
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcattt 63  Q
    ||||||||||||||  ||||||| | ||||||||||| ||||||||||||||    
T  6105453 agagagaaagttgtcaaaaagttgtaaaaaaatggttgtacaaatatcattt 6105504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 63
Target Start/End: Original strand, 6656362 - 6656413
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcattt 63  Q
    |||||||||||||| |||||||| | | ||| ||||||||||||||||||||    
T  6656362 agagagaaagttgtacaaaagttgtcacaaattggttctacaaatatcattt 6656413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 63
Target Start/End: Original strand, 6736764 - 6736815
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcattt 63  Q
    |||||||||||||| |||||||| | | ||| ||||||||||||||||||||    
T  6736764 agagagaaagttgtacaaaagttgtcacaaattggttctacaaatatcattt 6736815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 10644818 - 10644873
Alignment:
Q  12 agagagaaagttgtg-caaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||||||||  |||||||| ||| ||||||||| |||||||||||||||||    
T  10644818 agagagaaagttgtcacaaaagttgttacaaaatggttgtacaaatatcatttctc 10644873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 66
Target Start/End: Complemental strand, 12655961 - 12655922
Alignment:
Q  27 caaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||||||| ||||||||| |||||||||||||||||    
T  12655961 caaaagttattataaaatggttgtacaaatatcatttctc 12655922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 63
Target Start/End: Complemental strand, 14228761 - 14228710
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcattt 63  Q
    |||||||||||||| |||||||||| | ||||| ||| ||||||||||||||    
T  14228761 agagagaaagttgtacaaaagttatcacaaaatagttgtacaaatatcattt 14228710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 25830262 - 25830317
Alignment:
Q  12 agagagaaagttgtg-caaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||||||||  |||||||| ||| ||||||||| |||||||||||||||||    
T  25830262 agagagaaagttgtcacaaaagttgttagaaaatggttgtacaaatatcatttctc 25830317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 35067215 - 35067160
Alignment:
Q  12 agagagaaagttgtg-caaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||||||||  |||||||| |||| |||||||| |||||||||||||||||    
T  35067215 agagagaaagttgtcacaaaagttgttaagaaatggttgtacaaatatcatttctc 35067160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 35792124 - 35792069
Alignment:
Q  12 agagagaaagttgtg-caaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||||||||  |||||||| |||||||||| || |||||||||||||||||    
T  35792124 agagagaaagttgtcacaaaagtttttaaaaaatgattgtacaaatatcatttctc 35792069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 43285979 - 43286034
Alignment:
Q  12 agagagaaagttgtg-caaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||||||||  |||||||||||| ||||||||| | |||||||||||||||    
T  43285979 agagagaaagttgtcacaaaagttattagaaaatggttgtccaaatatcatttctc 43286034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 3650167 - 3650113
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||||||||  |||| |||||| ||| ||||| |||||||||||||||||    
T  3650167 agagagaaagttgttaaaaaattattacaaattggttgtacaaatatcatttctc 3650113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 7814609 - 7814663
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||||||||   ||| || |||||||||||||||| ||||||||||||||    
T  7814609 agagagaaagttgtcacaaaattgttaaaaaatggttctaaaaatatcatttctc 7814663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 9048333 - 9048387
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||| ||||  ||||||| ||| ||||||||| |||||||||||||||||    
T  9048333 agagagaaaattgtcaaaaagttgttagaaaatggttatacaaatatcatttctc 9048387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 10344378 - 10344324
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||||||||| ||||| |||||| ||||| | | |||||||||||||||||    
T  10344378 agagagaaagttgtccaaaaattattataaaatagatgtacaaatatcatttctc 10344324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 11114686 - 11114740
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||||||||  ||||||||||  ||||||| | |||||||||||||||||    
T  11114686 agagagaaagttgtcaaaaagttattgcaaaatggatgtacaaatatcatttctc 11114740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 18550033 - 18549979
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||| ||||| ||||||||||  ||||||| || |||||||||||||||||    
T  18550033 agagagaatgttgtacaaaagttatacaaaaatgattgtacaaatatcatttctc 18549979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 66
Target Start/End: Complemental strand, 23709026 - 23708976
Alignment:
Q  16 agaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||| ||||| ||||||||||  |||||||||| |||||||||||||||||    
T  23709026 agaaggttgtacaaaagttatacaaaaatggttgtacaaatatcatttctc 23708976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 28713147 - 28713093
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||| |||||  |||||||||  |||||||||| |||||||||||||||||    
T  28713147 agagagaaggttgtataaaagttatacaaaaatggttgtacaaatatcatttctc 28713093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 28720494 - 28720440
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||| |||||  |||||||||  |||||||||| |||||||||||||||||    
T  28720494 agagagaaggttgtataaaagttatacaaaaatggttgtacaaatatcatttctc 28720440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 28728136 - 28728082
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||| |||||  |||||||||  |||||||||| |||||||||||||||||    
T  28728136 agagagaaggttgtataaaagttatacaaaaatggttgtacaaatatcatttctc 28728082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 30943856 - 30943910
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||| ||||  ||||||| ||||||| ||||| |||||||||||||||||    
T  30943856 agagagaaaattgtcaaaaagttgttaaaaattggttgtacaaatatcatttctc 30943910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 31806353 - 31806299
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||||||||  |||| || ||| ||||||||| |||||||||||||||||    
T  31806353 agagagaaagttgtcaaaaaattgttagaaaatggttgtacaaatatcatttctc 31806299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 34641599 - 34641545
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||||||||  ||||| ||||  |||||||||| |||||||||||||||||    
T  34641599 agagagaaagttgcacaaaaattatataaaaatggttgtacaaatatcatttctc 34641545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 35701844 - 35701898
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||| ||||| |||||||| |  |||||||||| |||||||||||||||||    
T  35701844 agagagaaggttgtacaaaagttgtacaaaaatggttgtacaaatatcatttctc 35701898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 37784391 - 37784445
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||| |||| ||||||||||   ||||||||| |||||||||||||||||    
T  37784391 agagagaaaattgtacaaaagttataccaaaatggttgtacaaatatcatttctc 37784445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 40102077 - 40102023
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||||||||  ||||||| | ||||| ||||| |||||||||||||||||    
T  40102077 agagagaaagttgtcaaaaagttgtgaaaaagtggttgtacaaatatcatttctc 40102023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 66
Target Start/End: Complemental strand, 41955967 - 41955929
Alignment:
Q  28 aaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||| ||||||||||||| |||||||||||||||||    
T  41955967 aaaagttgttaaaaaatggttatacaaatatcatttctc 41955929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 42716374 - 42716320
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||||||||  |||| |||| ||||| ||||| |||||||||||||||||    
T  42716374 agagagaaagttgtcaaaaaattatgaaaaagtggttgtacaaatatcatttctc 42716320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 44061772 - 44061718
Alignment:
Q  12 agagagaaagttgtg-caaaagttattaaaaaatggttctacaaatatcatttct 65  Q
    ||||||||||||||  |||||||||| ||||||||||| | ||||||||||||||    
T  44061772 agagagaaagttgtcacaaaagttatcaaaaaatggttgttcaaatatcatttct 44061718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 16699585 - 16699642
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctcctt 69  Q
    ||||||||||||||   |||||| |||  |||||||| ||||||||||||||||||||    
T  16699585 agagagaaagttgtctcaaagttgttaccaaatggttgtacaaatatcatttctcctt 16699642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 13 - 66
Target Start/End: Complemental strand, 30129468 - 30129415
Alignment:
Q  13 gagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||||||| |||||||| | ||| ||||||| |||| ||||||||||||    
T  30129468 gagagaaagttgttcaaaagttgtcaaataatggttgtacagatatcatttctc 30129415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 1268793 - 1268845
Alignment:
Q  13 gagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttct 65  Q
    |||| |||||||| |||||||| ||| |||||| || ||||||||||||||||    
T  1268793 gagataaagttgtacaaaagttcttacaaaatgattgtacaaatatcatttct 1268845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 63
Target Start/End: Original strand, 3547176 - 3547228
Alignment:
Q  12 agagagaaagttgtg-caaaagttattaaaaaatggttctacaaatatcattt 63  Q
    ||||| ||||||||| |||||||||| ||||| ||||| ||||||||||||||    
T  3547176 agagataaagttgtgacaaaagttatcaaaaagtggttgtacaaatatcattt 3547228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 20473831 - 20473779
Alignment:
Q  14 agagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||||||  |||| || ||| ||||||||| |||||||||||||||||    
T  20473831 agagaaagttgtcaaaaaattgttataaaatggttgtacaaatatcatttctc 20473779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 20852969 - 20852917
Alignment:
Q  16 agaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctcct 68  Q
    ||||||||||  |||| |||| | ||||||||| |||||||||||||||||||    
T  20852969 agaaagttgtctaaaaattatcataaaatggttgtacaaatatcatttctcct 20852917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 67
Target Start/End: Original strand, 21526313 - 21526353
Alignment:
Q  27 caaaagttattaaaaaatggttctacaaatatcatttctcc 67  Q
    |||||||| ||||||| ||||| ||||||||||||||||||    
T  21526313 caaaagttgttaaaaagtggttgtacaaatatcatttctcc 21526353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 28623130 - 28623182
Alignment:
Q  14 agagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||||||  ||||||||| | | ||||||| |||||||||||||||||    
T  28623130 agagaaagttgtcaaaaagttatcacataatggttgtacaaatatcatttctc 28623182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 65
Target Start/End: Original strand, 32020488 - 32020524
Alignment:
Q  29 aaagttattaaaaaatggttctacaaatatcatttct 65  Q
    |||||||| ||||||||||| ||||||||||||||||    
T  32020488 aaagttatcaaaaaatggttgtacaaatatcatttct 32020524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 39021462 - 39021514
Alignment:
Q  14 agagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||| ||||||  ||||||||| | ||||||||| |||||||||||||||||    
T  39021462 agagagagttgtcaaaaagttatcacaaaatggttgtacaaatatcatttctc 39021514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 16743283 - 16743337
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||||||||  |||| |||||||||||||||| |||||||||||||||||    
T  16743283 agagagaaagttgtctaaaaattattaaaaaatggttgtacaaatatcatttctc 16743337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 28883765 - 28883819
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||||||||  ||| ||||||||||||||||| |||||||||||||||||    
T  28883765 agagagaaagttgtcaaaaggttattaaaaaatggttgtacaaatatcatttctc 28883819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 66
Target Start/End: Original strand, 8778890 - 8778943
Alignment:
Q  13 gagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||||||||  ||||||| ||||||||||||| |||||||||||||||||    
T  8778890 gagagaaagttgtcaaaaagttgttaaaaaatggttgtacaaatatcatttctc 8778943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 3339516 - 3339570
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||||||||| |||||||| | | ||||||||| |||||||||||||||||    
T  3339516 agagagaaagttgtacaaaagttgtcacaaaatggttgtacaaatatcatttctc 3339570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 9188961 - 9189015
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||| ||||||||  ||||||| ||||||||||||| |||||||||||||||||    
T  9188961 agagataaagttgtctaaaagttgttaaaaaatggttgtacaaatatcatttctc 9189015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 63
Target Start/End: Original strand, 34570611 - 34570663
Alignment:
Q  12 agagagaaagttgtg-caaaagttattaaaaaatggttctacaaatatcattt 63  Q
    ||||||||||||||  |||||||||||| ||||||||| ||||||||||||||    
T  34570611 agagagaaagttgtcacaaaagttattacaaaatggttgtacaaatatcattt 34570663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 63
Target Start/End: Original strand, 3049547 - 3049598
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcattt 63  Q
    ||||||||||||||| ||||||| ||| |||||| || ||||||||||||||    
T  3049547 agagagaaagttgtgaaaaagttgttagaaaatgattgtacaaatatcattt 3049598  T

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Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 16337939 - 16337994
Alignment:
Q  12 agagagaaagttgtg-caaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||||||||  |||||||||||| ||||||||| ||| |||||||||||||    
T  16337939 agagagaaagttgttacaaaagttattataaaatggttgtaccaatatcatttctc 16337994  T

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Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 63
Target Start/End: Complemental strand, 21506390 - 21506339
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcattt 63  Q
    ||||||||||||||  ||||||| | ||||||||||| ||||||||||||||    
T  21506390 agagagaaagttgtcaaaaagttgtcaaaaaatggttgtacaaatatcattt 21506339  T

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Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 17835666 - 17835612
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||||||||  ||||||| ||| |||| |||| |||||||||||||||||    
T  17835666 agagagaaagttgtcaaaaagttgttagaaaagggttgtacaaatatcatttctc 17835612  T

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Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 19789093 - 19789147
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||||||||  ||||||| | | ||||||||| |||||||||||||||||    
T  19789093 agagagaaagttgtcaaaaagttgtaataaaatggttgtacaaatatcatttctc 19789147  T

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Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 66
Target Start/End: Original strand, 26391318 - 26391356
Alignment:
Q  28 aaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||| ||||||||||||| |||||||||||||||||    
T  26391318 aaaagttgttaaaaaatggttgtacaaatatcatttctc 26391356  T

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Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 28965857 - 28965911
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||||||||  ||||||| | | ||||||||| |||||||||||||||||    
T  28965857 agagagaaagttgtcaaaaagttgtaacaaaatggttgtacaaatatcatttctc 28965911  T

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Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 32729943 - 32729889
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||||||||  ||||||| | | ||||||||| |||||||||||||||||    
T  32729943 agagagaaagttgtataaaagttgtcagaaaatggttgtacaaatatcatttctc 32729889  T

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Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 63
Target Start/End: Original strand, 3552186 - 3552222
Alignment:
Q  27 caaaagttattaaaaaatggttctacaaatatcattt 63  Q
    |||||||| ||||||||||||| ||||||||||||||    
T  3552186 caaaagttgttaaaaaatggttgtacaaatatcattt 3552222  T

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Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 76
Target Start/End: Original strand, 23633340 - 23633404
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctccttgcaaaat 76  Q
    ||||||||||||||  ||||||||| | ||| ||||| || |||||||||||||| || ||||||    
T  23633340 agagagaaagttgtcaaaaagttataataaagtggttgtagaaatatcatttctcttttcaaaat 23633404  T

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Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 66
Target Start/End: Original strand, 25127848 - 25127904
Alignment:
Q  11 cagagagaaagttgtg-caaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||||||| |  |||||||| ||| ||||||||| |||||||||||||||||    
T  25127848 cagagagaaagttttcacaaaagttgttacaaaatggttgtacaaatatcatttctc 25127904  T

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Target: scaffold0011 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 18649 - 18595
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||||||||| |||||||||| | ||| ||||| |||||||||||||||||    
T  18649 agagagaaagttgtacaaaagttatcacaaattggttgtacaaatatcatttctc 18595  T

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Target: scaffold0049 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 66
Target Start/End: Original strand, 72187 - 72240
Alignment:
Q  13 gagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||||||||  ||||||| ||| ||||||||| |||||||||||||||||    
T  72187 gagagaaagttgtctaaaagttgttacaaaatggttgtacaaatatcatttctc 72240  T

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Target: scaffold0687 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0687
Description:

Target: scaffold0687; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 7114 - 7060
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||||||||   ||| || |||||||||||||||| ||||||||||||||    
T  7114 agagagaaagttgtcacaaaattgttaaaaaatggttctaaaaatatcatttctc 7060  T

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Target: scaffold0514 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0514
Description:

Target: scaffold0514; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 1862 - 1916
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||  |||| ||||||||||  |||||||||| |||||||||||||||||    
T  1862 agagagaagattgtacaaaagttatacaaaaatggttgtacaaatatcatttctc 1916  T

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Target: scaffold0154 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 66
Target Start/End: Complemental strand, 4365 - 4315
Alignment:
Q  16 agaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||||  ||||||||| | ||||||||| |||||||||||||||||    
T  4365 agaaagttgtcaaaaagttatcataaaatggttgtacaaatatcatttctc 4315  T

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Target: scaffold0085 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 63
Target Start/End: Original strand, 31316 - 31366
Alignment:
Q  13 gagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcattt 63  Q
    ||||||||||||| |||||||| ||| ||||||||| | ||||||||||||    
T  31316 gagagaaagttgtccaaaagttgttacaaaatggttgtccaaatatcattt 31366  T

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Target: scaffold0020 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 155960 - 155906
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||||||||  ||||||| | | ||||||||| |||||||||||||||||    
T  155960 agagagaaagttgtcaaaaagttgtaataaaatggttgtacaaatatcatttctc 155906  T

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Target: scaffold0019 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 72420 - 72366
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||| |||| |||||||| ||  ||||||||| |||||||||||||||||    
T  72420 agagagaaaattgttcaaaagttgttgcaaaatggttgtacaaatatcatttctc 72366  T

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Target: scaffold0014 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 145115 - 145061
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||| ||||| |||||||| |  |||||||||| |||||||||||||||||    
T  145115 agagagaatgttgtacaaaagttgtacaaaaatggttgtacaaatatcatttctc 145061  T

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Target: scaffold0003 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 337172 - 337118
Alignment:
Q  12 agagagaaagttgtgcaaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    |||||||||||| | |||||||| | | ||||||||| |||||||||||||||||    
T  337172 agagagaaagttattcaaaagttgtcagaaaatggttgtacaaatatcatttctc 337118  T

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Target: scaffold0003; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 67
Target Start/End: Complemental strand, 366348 - 366293
Alignment:
Q  12 agagagaaagttgtg-caaaagttattaaaaaatggttctacaaatatcatttctcc 67  Q
    ||||||||||||||  |||||||| ||||||| ||||| ||||||||||||||||||    
T  366348 agagagaaagttgtcacaaaagttgttaaaaa-tggttgtacaaatatcatttctcc 366293  T

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Target: scaffold0178 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 9829 - 9776
Alignment:
Q  14 agagaaagttgtg-caaaagttattaaaaaatggttctacaaatatcatttctc 66  Q
    ||||||||||||  ||||| |||| ||||||||||| |||||||||||||||||    
T  9829 agagaaagttgtcacaaaaattataaaaaaatggttgtacaaatatcatttctc 9776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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