View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14912_low_39 (Length: 247)
Name: NF14912_low_39
Description: NF14912
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14912_low_39 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 4 - 247
Target Start/End: Original strand, 16963567 - 16963810
Alignment:
| Q |
4 |
aagccatatttttaatttacatgtaccaaacaaagtagtagtttccaatgtatattgtgtctagattaccatatttaggactatatcatacaagacaaat |
103 |
Q |
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| T |
16963567 |
aagccatatttttaatttacatgtaccaaacaaagtagtagtttccaatgtatattgcgtctagattaccatatttaggactatatcatacaagacaaat |
16963666 |
T |
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| Q |
104 |
caatatacctctcaaacagcctggaaaatttacagtttcatgaattgcttgtagtagctcagaacttttatgatgtagctgtactttgttcaggtggctg |
203 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
16963667 |
caatatacctctcaaacagcctggaaaatttacagtttcatgaattgcttgtagtagctcagaacttttatgatgtagctgtactttgttcaggtggctg |
16963766 |
T |
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| Q |
204 |
cagaaaagaagcactgaaatggcagaaatgataataaagagagg |
247 |
Q |
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| T |
16963767 |
cagaaaagaagcactgaaatggcaaaaatgataataaagagagg |
16963810 |
T |
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